Cmc04g0092321 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0092321
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 4198322 .. 4200977 (+)
RNA-Seq ExpressionCmc04g0092321
SyntenyCmc04g0092321
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTTTTATATAATTTCAACTACATCACATATTATAAACATTCCCGATCAATTTTAATTGTTATACTTAATGAGAGAGAAGCCACTCACAATTGGACCTTGAAAATAAGCTTTTAATGATGCAAAAACCCTAGCAAATTGGAATTAGAAATCCTATTGGGATAACTAATTCTCAATCAAGAAAACCTCCTCAAGCTAAAGATTGGGTTAGACCGAATTCATATCAACTTGACTGAAGGGAACTTGAAAAAGGAGGAGAGGCAGAGCGTTCCACAAGAATTGATGTCTGGCTTGTTCATGCCCCTCATTATAGTGAAATCTCAATACGTTTGACTCGTAAAAAATCACCATGATTCACGCTTCAGTGCATTTTAATAGCTCACCATGGAGGATCTTTAGTACAATGATACAGTTATACAAGCATAAAACTTGAAACTTCCAGCATGAAGAACTCAAGCAAAGCAGTAGAGTAGTCAGTAGACCAAGCCAAACTCACATCCAGACAGTGAGAAAATTGGAAAAGCATAAAAGCGTATTAGATAGAAACATTATAAACAATCAACTCTAAAGTTTTTGTGTTCTTGCTTGAAGTTGCTTTTTCTGTCATTACCAAAAGTGAACGGAACAGACCACGTGAGTATGAAACAGATCCTCGTATTGCCCTAAACCTTTGAGAAAATGATACTGTACAACCTTTAGGGCTTATACGAGGAAGCCATGGTGAAGTCAAGAATTTCACCATACATTTTGACTGCCAAACCAAACGGATCCATCCCCCACCTCCACGACCTCAGATAATAATAGTCTAGTTCAAGCACATATAAAATTCAAGATCTTTGTGAACTTCCTTCAAAACTTATGGAGGTTAGTGCAAAGCAAGTTGGGGTAGTTTAGAAGATGAATGTAGGTTGAGGTCTAAAGGAGCAAAACTAGTTGTGTAATGAACTAATAGAACAATACCCATCATCACAAAACAGAACATTAAGAAATTTGACCATCCAATGTTCCAACAGAATGTACTGCTATTTCCCCCTCCACCTTTACATTACCCACAAGAGCGAGCTAATTTAGCTTTCTCAGGTACAGGAAATGCTTCCATACAATCAAAGACTAATGTCTGACTCTGATCCTAAAAGTGAACATCTCTAGGTTCTAGATGTTTAACTTTGAAAGCCATAGAACTCCAGATAAATATCCAAGTGCAACCAAAATCTGGTTTGACAAGAAAGAATGAAAACCAATAACTCAAGTAATTCACCTAAAACCTTCAGATCATGTGCAATTTCTATATCAAGTATGTAAGCATCGGTACACCAGATGAAGCAAATTCAATTATATATCAAAATTTACAGCTTTAATAACATCCATCCCTTGTATAAAGTACGTGTAAAGGCAAGCAAAACTTAAGCATTACCTTCAATTTGCTTCCTTGGGCTTCAACGATCTAGCTCAATCTGTTTTGAATTTCGATAGAAACCTCTCAAACTTGTCTTTCAACTGTTCGAAGGAAATACATCTTTAACAGCAGAAGCAGCGGTCAAGTAATTAAGAGTGTTTCTCAATGTCTCTTTCTCCCTTTTCAACCTCGCCGCCGTATCCTCCAATTCAAGCAACGCTTGTTGTTCTCTCGGCGCACCTTCAAACGTGCTTCCAACGAAGAACGAGAAAGGAGTTGGGAATAAATTCCTTCTCAAATCCTGAACCTCTTTCTCCGGCTTACCACTCAACCTATTCGACAATCGAATCACGTCCTTCATGTACGATTCTACCTCATTCGCCAACGCATCCAAATCCTCTTCACCATTCCCGGACGGCCGGTCCTCAAGCCATGTAACTTCAGCAACAAGATACGGTTTCGTCCGAACAAGATTAGTGACTCGAAACCGCTCTTGGCCTTTACAAATAAGGAAGAATCGATCGTCAACGAGACGCTCGTGTTTAACAACCTCACCAACACATCCAACATCCGTGGTACCGGAAACTGCATCAGTGTAAATAACTCCAAAGCGAAGATCGGTTTGGAGTAGAGTGTGCATCATCATCCGGTAACGAAATTCGAAGATCTGCAGAGGAAGAATAGCGCCAGGGAAGAGAACAAGAGGAAGGGGAAAAAGCGGAAGCTCAACAACATCGTCTGATTTAGGAGAGCCGGTGTGATGTTTTTCGGGGAAAGATGAAGCAGAACACTTGAGTGAATTGGGTTTGTGGTGGCGATGGCGAAAAAGGGCGGGGGCGGCGGCGGAGGCGGGAGAGAAGAATCTAGGGCTAGGGATTAAGGAAGAGGAAATGGAGTTGGGGTTTAAAATGGGTTTATGGGATAAAGAGGAAGAGGAAGAAGAAGGAATGAGCTGAGGGAGAGCCATTGAAAAGGTGCCAGTGTTTTCACAGAAGGAAAAAAAAGTGTTATAGATAAAAGGAGAAGCAAAATTGTTTGCTTGTTTGGTAGAGAGACTGTATACTGAGCTCTCTACCTCACAAAAAAAAAATATCAAAAACTCCTCTCCCAGAAATTAAAAATATTTATTTACTTACTCTCTTTTTTTTTTCTCTCTCTCTCTCTCTCTCCAATCAAAGAAAAATCCGGTGGTTTTAAGGAGAGGCCAAACTCCAATTCAGATTGTGGATAATATGGAGAGAGAGGAAATAATTTGAGATTG

mRNA sequence

TCCTTTTATATAATTTCAACTACATCACATATTATAAACATTCCCGATCAATTTTAATTGTTATACTTAATGAGAGAGAAGCCACTCACAATTGGACCTTGAAAATAAGCTTTTAATGATGCAAAAACCCTAGCAAATTGGAATTAGAAATCCTATTGGGATAACTAATTCTCAATCAAGAAAACCTCCTCAAGCTAAAGATTGGGTTAGACCGAATTCATATCAACTTGACTGAAGGGAACTTGAAAAAGGAGGAGAGGCAGAGCGTTCCACAAGAATTGATGTCTGGCTTGTTCATGCCCCTCATTATAGTGAAATCTCAATACGTTTGACTCGTAAAAAATCACCATGATTCACGCTTCAGTGCATTTTAATAGCTCACCATGGAGGATCTTTAGTACAATGATACAGTTATACAAGCATAAAACTTGAAACTTCCAGCATGAAGAACTCAAGCAAAGCAGTAGAGTAGTCAGTAGACCAAGCCAAACTCACATCCAGACAGTGAGAAAATTGGAAAAGCATAAAAGCGTATTAGATAGAAACATTATAAACAATCAACTCTAAAGTTTTTGTGTTCTTGCTTGAAGTTGCTTTTTCTGTCATTACCAAAAGTGAACGGAACAGACCACGTGAGTATGAAACAGATCCTCGTATTGCCCTAAACCTTTGAGAAAATGATACTGTACAACCTTTAGGGCTTATACGAGGAAGCCATGGTGAAGTCAAGAATTTCACCATACATTTTGACTGCCAAACCAAACGGATCCATCCCCCACCTCCACGACCTCAGATAATAATAGTCTAGTTCAAGCACATATAAAATTCAAGATCTTTGTGAACTTCCTTCAAAACTTATGGAGGTTAGTGCAAAGCAAGTTGGGGTAGTTTAGAAGATGAATGTAGGTTGAGGTCTAAAGGAGCAAAACTAGTTGTGTAATGAACTAATAGAACAATACCCATCATCACAAAACAGAACATTAAGAAATTTGACCATCCAATGTTCCAACAGAATGTACTGCTATTTCCCCCTCCACCTTTACATTACCCACAAGAGCGAGCTAATTTAGCTTTCTCAGGTACAGGAAATGCTTCCATACAATCAAAGACTAATGTCTGACTCTGATCCTAAAAGTGAACATCTCTAGGTTCTAGATGTTTAACTTTGAAAGCCATAGAACTCCAGATAAATATCCAAGTGCAACCAAAATCTGGTTTGACAAGAAAGAATGAAAACCAATAACTCAAGTAATTCACCTAAAACCTTCAGATCATGTGCAATTTCTATATCAAGTATGTAAGCATCGGTACACCAGATGAAGCAAATTCAATTATATATCAAAATTTACAGCTTTAATAACATCCATCCCTTGTATAAAGTACGTGTAAAGGCAAGCAAAACTTAAGCATTACCTTCAATTTGCTTCCTTGGGCTTCAACGATCTAGCTCAATCTGTTTTGAATTTCGATAGAAACCTCTCAAACTTGTCTTTCAACTGTTCGAAGGAAATACATCTTTAACAGCAGAAGCAGCGGTCAAGTAATTAAGAGTGTTTCTCAATGTCTCTTTCTCCCTTTTCAACCTCGCCGCCGTATCCTCCAATTCAAGCAACGCTTGTTGTTCTCTCGGCGCACCTTCAAACGTGCTTCCAACGAAGAACGAGAAAGGAGTTGGGAATAAATTCCTTCTCAAATCCTGAACCTCTTTCTCCGGCTTACCACTCAACCTATTCGACAATCGAATCACGTCCTTCATGTACGATTCTACCTCATTCGCCAACGCATCCAAATCCTCTTCACCATTCCCGGACGGCCGGTCCTCAAGCCATGTAACTTCAGCAACAAGATACGGTTTCGTCCGAACAAGATTAGTGACTCGAAACCGCTCTTGGCCTTTACAAATAAGGAAGAATCGATCGTCAACGAGACGCTCGTGTTTAACAACCTCACCAACACATCCAACATCCGTGGTACCGGAAACTGCATCAGTGTAAATAACTCCAAAGCGAAGATCGGTTTGGAGTAGAGTGTGCATCATCATCCGGTAACGAAATTCGAAGATCTGCAGAGGAAGAATAGCGCCAGGGAAGAGAACAAGAGGAAGGGGAAAAAGCGGAAGCTCAACAACATCGTCTGATTTAGGAGAGCCGGTGTGATGTTTTTCGGGGAAAGATGAAGCAGAACACTTGAGTGAATTGGGTTTGTGGTGGCGATGGCGAAAAAGGGCGGGGGCGGCGGCGGAGGCGGGAGAGAAGAATCTAGGGCTAGGGATTAAGGAAGAGGAAATGGAGTTGGGGTTTAAAATGGGTTTATGGGATAAAGAGGAAGAGGAAGAAGAAGGAATGAGCTGAGGGAGAGCCATTGAAAAGGTGCCAGTGTTTTCACAGAAGGAAAAAAAAGTGTTATAGATAAAAGGAGAAGCAAAATTGTTTGCTTGTTTGGTAGAGAGACTGTATACTGAGCTCTCTACCTCACAAAAAAAAAATATCAAAAACTCCTCTCCCAGAAATTAAAAATATTTATTTACTTACTCTCTTTTTTTTTTCTCTCTCTCTCTCTCTCTCCAATCAAAGAAAAATCCGGTGGTTTTAAGGAGAGGCCAAACTCCAATTCAGATTGTGGATAATATGGAGAGAGAGGAAATAATTTGAGATTG

Coding sequence (CDS)

ATGTCTCTTTCTCCCTTTTCAACCTCGCCGCCGTATCCTCCAATTCAAGCAACGCTTGTTGTTCTCTCGGCGCACCTTCAAACGTGCTTCCAACGAAGAACGAGAAAGGAGTTGGGAATAAATTCCTTCTCAAATCCTGAACCTCTTTCTCCGGCTTACCACTCAACCTATTCGACAATCGAATCACGTCCTTCATGTACGATTCTACCTCATTCGCCAACGCATCCAAATCCTCTTCACCATTCCCGGACGGCCGGTCCTCAAGCCATGTAA

Protein sequence

MSLSPFSTSPPYPPIQATLVVLSAHLQTCFQRRTRKELGINSFSNPEPLSPAYHSTYSTIESRPSCTILPHSPTHPNPLHHSRTAGPQAM
Homology
[Close]
BLAST of Cmc04g0092321 vs. NCBI nr
Match: KAG5613384.1 (hypothetical protein H5410_024665 [Solanum commersonii])

HSP 1 Score: 62.0 bits (149), Expect = 3.0e-06
Identity = 44/89 (49.44%), Postives = 47/89 (52.81%), Query Frame = 0 

Query: 1   MSLSPFSTSPPYPPIQATLVVLSAHLQTCFQRRTRKELGINSFSNPEPLSPAYHSTYSTI 60
           MS SP S S  Y  IQA LVV    LQT F RRT+     NS +NP P SP  HS     
Sbjct: 36  MSPSPSSISSRYLLIQAMLVVPLVPLQTYFPRRTKMASETNSSANPLPPSPVSHSICLIN 95

Query: 61  ESRPSCTILPHSPTHPNPLHHSRTAGPQA 90
           ES  S    PHSP  P+   HS TAGP A
Sbjct: 96  ESHLSYNSPPHSPNPPHHPPHSPTAGPPA 124

The following BLAST results are available for this feature:
BLAST of Cmc04g0092321 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5613384.13.0e-0649.44hypothetical protein H5410_024665 [Solanum commersonii][more]
BLAST of Cmc04g0092321 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0092321 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0092321 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0092321.1Cmc04g0092321.1mRNA