Cmc04g0092051 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0092051
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ATP synthase subunit e, mitochondrial
Location	CMiso1.1chr04: 3838812 .. 3840175 (-)
RNA-Seq Expression	Cmc04g0092051
Synteny	Cmc04g0092051

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTTAGCCCAGACAGGGAGGTGATTTACCAAAATTACCCTCGATTAATTTGAGTTCGATATTCGGGCACTCGCACACCCAGTCGAAGGAGAAGATTAGGGTTTTACGATCTAAGCAAGAAAGGAGAACTGATCGGCAGTCGAAGGAGAAGACAAGTTCAAGTATTTCTGCCTTGCCACTGATAATCATCATCTACATCTAATGGCGCCCCCTCCTGGCCCTTACTCCGGCACCAGCACCCTCGCTCTGGTATTTTCCCTTTCTTTTGTCTCTAAATTCTAATCATCTGCGGAGCTACTTTCTCTTGTTTTTCTGGGAAGTCGAATGGATCGGTTCCTTTTAGGTTAACTTTTTTTTCTCTCCTTTTTTGTACTAATTTTTTTCTACAGGTAGCCCGTGCATCAGCTTTCACCTTTGGTTTAGTTTACGGAAACATTAAACTCAAGGTTCTGAAGGTAAAATTGGAATCTAACTGCTCGTTGCTTTTATAGTAAATTCATTGAATTGGGTTTGATTGTGTGGCGCATCTGCTTAAATCAACTTCATATTAATACTCACCATCTTGCTTCTTCATTGACATGAATTCAACATTAGAAATTGATTTCATGTCATCTGTTTCAATGTTTCGACGTGCTTTCTTTTGGATACGAGATTTCTTTACGACCGTATTTTCATCTACATTTATAATTTAAGGGAAAAGTCTTGGAAACTTAAAGGTTCAAATCTTGTGCTATTTTATTGTCACAAACGTGACATTTTTACCTATAAGAGTTTCTACAGCTTGCCTCAACTCCCATGCAATGCTTTTTGTTTTTTAGATTAAATATGGGATAAATTTCTAGCATGTAAGCACATGAAACATAGATCGCCATCGCCTTATGTACCTTGATCAGTTTATCGTATTGAACTTGAAGTTGGTTGTATTCTTGTGCATTTGCCAGGCAAAGGCCAAGTCACGTGCCAAAGCTGAAGCCAAGGCCCATCACTGATGAACTCATTTATGATGTAGCTTGTAGCGATGGAAATTTCCACATAGGGAGACACTCTGATCATTGGTTGGAGAAATATGATTTTTCGCTTGATAATTTAGTAAATTTTGTTTATTTTACTGCCGAAACAAAGAAAATTTCTTTATTTAGACGAGGTTGGTTTTGCGAATACCGTATGGTGTACGCTTAGTTTGTCAGTTCCCATTGGTAATATTCTACCTGTGAGAAGGTTGTTCTTGAAATAAAGGCCACACACCATCCTGATGAATAAGACAGTTTGAGATTTTTTTCTGTTAAGATACCACTCTCGTTTTGCTGTTTAAACTTATGATTTGCTTTCTGACCTTTGGTTCAGTTTATAGGTTCATGTTCTA

mRNA sequence

GATTTTAGCCCAGACAGGGAGGTGATTTACCAAAATTACCCTCGATTAATTTGAGTTCGATATTCGGGCACTCGCACACCCAGTCGAAGGAGAAGATTAGGGTTTTACGATCTAAGCAAGAAAGGAGAACTGATCGGCAGTCGAAGGAGAAGACAAGTTCAAGTATTTCTGCCTTGCCACTGATAATCATCATCTACATCTAATGGCGCCCCCTCCTGGCCCTTACTCCGGCACCAGCACCCTCGCTCTGGTAGCCCGTGCATCAGCTTTCACCTTTGGTTTAGTTTACGGAAACATTAAACTCAAGGTTCTGAAGGCAAAGGCCAAGTCACGTGCCAAAGCTGAAGCCAAGGCCCATCACTGATGAACTCATTTATGATGTAGCTTGTAGCGATGGAAATTTCCACATAGGGAGACACTCTGATCATTGGTTGGAGAAATATGATTTTTCGCTTGATAATTTAGTAAATTTTGTTTATTTTACTGCCGAAACAAAGAAAATTTCTTTATTTAGACGAGGTTGGTTTTGCGAATACCGTATGGTGTACGCTTAGTTTGTCAGTTCCCATTGGTAATATTCTACCTGTGAGAAGGTTGTTCTTGAAATAAAGGCCACACACCATCCTGATGAATAAGACAGTTTGAGATTTTTTTCTGTTAAGATACCACTCTCGTTTTGCTGTTTAAACTTATGATTTGCTTTCTGACCTTTGGTTCAGTTTATAGGTTCATGTTCTA

Coding sequence (CDS)

ATGGCGCCCCCTCCTGGCCCTTACTCCGGCACCAGCACCCTCGCTCTGGTAGCCCGTGCATCAGCTTTCACCTTTGGTTTAGTTTACGGAAACATTAAACTCAAGGTTCTGAAGGCAAAGGCCAAGTCACGTGCCAAAGCTGAAGCCAAGGCCCATCACTGA

Protein sequence

MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH

Homology

[Close]

BLAST of Cmc04g0092051 vs. NCBI nr
Match: XP_008466504.1 (PREDICTED: uncharacterized protein LOC103503894 [Cucumis melo])

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. NCBI nr
Match: XP_004147837.1 (uncharacterized protein LOC101217057 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 1.7e-17
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPGPYSGTSTLALVARASAF+FGLVYG+IKLKVLKAKAKSRAKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. NCBI nr
Match: XP_022936650.1 (uncharacterized protein LOC111443182 [Cucurbita moschata] >XP_023536066.1 uncharacterized protein LOC111797320 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. NCBI nr
Match: XP_022132454.1 (uncharacterized protein LOC111005275 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 5.0e-17
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPGPYSGTSTLALVARASAFTFG+VYG+IKLKVLKAKAKS AKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. NCBI nr
Match: XP_010271417.1 (PREDICTED: uncharacterized protein LOC104607478 [Nelumbo nucifera] >DAD40463.1 TPA_asm: hypothetical protein HUJ06_014786 [Nelumbo nucifera])

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPGPYSGTSTLALVARASAFTFG+VYG++KLK LKAKAKSR+KAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGIVYGSLKLKYLKAKAKSRSKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. ExPASy TrEMBL
Match: A0A1S3CRK7 (uncharacterized protein LOC103503894 OS=Cucumis melo OX=3656 GN=LOC103503894 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.5e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. ExPASy TrEMBL
Match: A0A0A0LH44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866500 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.3e-18
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPGPYSGTSTLALVARASAF+FGLVYG+IKLKVLKAKAKSRAKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. ExPASy TrEMBL
Match: A0A6J1FEB4 (uncharacterized protein LOC111443182 OS=Cucurbita moschata OX=3662 GN=LOC111443182 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. ExPASy TrEMBL
Match: A0A6J1BT37 (ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005275 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPGPYSGTSTLALVARASAFTFG+VYG+IKLKVLKAKAKS AKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. ExPASy TrEMBL
Match: A0A1U8B5F9 (ATP synthase subunit e, mitochondrial OS=Nelumbo nucifera OX=4432 GN=LOC104607478 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-17
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPGPYSGTSTLALVARASAFTFG+VYG++KLK LKAKAKSR+KAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGIVYGSLKLKYLKAKAKSRSKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. TAIR 10
Match: AT3G01130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 1.6e-16
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          MAPPPG YSGTSTLALVARASAF  GL+YGNIKLK LK K  S+ KAEAKAHH
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53

[Close]

BLAST of Cmc04g0092051 vs. TAIR 10
Match: AT5G15320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-13
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          M  PPG YSGTS+LALVARASAF  GLVYGN+KLKVLK K+ S+ K EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53

[Close]

BLAST of Cmc04g0092051 vs. TAIR 10
Match: AT3G01130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-11
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAK 41
          MAPPPG YSGTSTLALVARASAF  GL+YGNIKLK LK K
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKHK 40

[Close]

BLAST of Cmc04g0092051 vs. TAIR 10
Match: AT5G15320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 4.4e-11
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 54
          M  PPG YSGTS+LALVARASAF  GLVYGN+KLK+   K+ S+ K EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKI---KSMSQKKVEATAHH 50

The following BLAST results are available for this feature:

BLAST of Cmc04g0092051 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466504.1	1.6e-18	100.00	PREDICTED: uncharacterized protein LOC103503894 [Cucumis melo]	[more]
XP_004147837.1	1.7e-17	96.23	uncharacterized protein LOC101217057 [Cucumis sativus]	[more]
XP_022936650.1	2.2e-17	98.11	uncharacterized protein LOC111443182 [Cucurbita moschata] >XP_023536066.1 unchar...	[more]
XP_022132454.1	5.0e-17	94.34	uncharacterized protein LOC111005275 [Momordica charantia]	[more]
XP_010271417.1	1.5e-16	90.57	PREDICTED: uncharacterized protein LOC104607478 [Nelumbo nucifera] >DAD40463.1 T...	[more]

BLAST of Cmc04g0092051 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0092051 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CRK7	7.5e-19	100.00	uncharacterized protein LOC103503894 OS=Cucumis melo OX=3656 GN=LOC103503894 PE=...	[more]
A0A0A0LH44	8.3e-18	96.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866500 PE=4 SV=1	[more]
A0A6J1FEB4	1.1e-17	98.11	uncharacterized protein LOC111443182 OS=Cucurbita moschata OX=3662 GN=LOC1114431...	[more]
A0A6J1BT37	2.4e-17	94.34	ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A1U8B5F9	7.0e-17	90.57	ATP synthase subunit e, mitochondrial OS=Nelumbo nucifera OX=4432 GN=LOC10460747...	[more]

BLAST of Cmc04g0092051 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01130.1	1.6e-16	81.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G15320.1	1.2e-13	73.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G01130.2	1.2e-11	85.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G15320.2	4.4e-11	67.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36028	OSJNBB0050O03.8 PROTEIN	coord: 1..53
None	No IPR available	PANTHER	PTHR36028:SF4	SUBFAMILY NOT NAMED	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0092051.1	Cmc04g0092051.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity