Cmc04g0090311 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0090311
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	serine/arginine-rich splicing factor RSZ22A
Location	CMiso1.1chr04: 2523985 .. 2528711 (-)
RNA-Seq Expression	Cmc04g0090311
Synteny	Cmc04g0090311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTACCAATTTTGAAAATTTCAAGGACTCCGACCTAAATTCGTAGGAGATATAAAGCGTTTCCGTAGTGCTCGAAACCCAAAATATCTCAACCTTGAAGAGAGAATCACGTTGAGCTGCTAGGGTTTTCTCCGGTACGTGCTTCATCGGCTTCGATCTGTTCATACGCCCACTCGTACTTGTTTTCTTATCTAATTTCATGTTTGCCTTCAAGTAAATTATCATCTTGAAATATATTTGTTTTCCTCCCTCAAGCCTCCGGTCATTTTCCTGATATCGGATTCTTACCCGTAGGGCTAATGCTCGATTTTTCTCTAATTGAATAAGAGAGAACAGTTTCTTTCTTTCCAATTTTCTTTTTTAAATATTTTTTTTTGAGTATAACGTGTGAATTCGTGTATTGTATTGTCTCTTTGGGTTACTTATTTGATTCTTTGTGTGATCGATAGGTTTCTTGTAAAGCAATGTCTCGTGTATATGTTGGGAATTTGGATCCGAGGGTCTCTGAGCGCGAGCTTGAAGATGAATTTCGTGTATTTGGAGTTATTCGAAGGTGTGATACATTTAACTTCTTGGTCAGCTTTTTGTGTTTTCTGCTTCCAATTTTTAACGCCATTTACTAGACAAGATGATATATATGTATAATTTGGTTATTTTTATTGGAATATGATATAGGTTTATAGCTGTATGTGACAAATTTGAACACTCAAAACTTGTGGTAAAAATATTTACCAGCACCTCTACTTGGCTTACGGCCATTGATTTTATGCTTTCAAGAATCCTAACATCAACTTATCTCCTCAAATTTACTTATTTGGTTATTTATCTTCTTGCTATCAACTCTTTGGCCGTTGCCATGGATTTACCTGAATTTAGATTAAATATCTTACTCAGTATTTTCTTTAGAAGGTCTAACTTACATGATGATGTTGATACCAAATAATTTGGATGTTATCTTGGGCATCTAGTAGTCTTCTTAGCACACCGCTGCGAATTGAAAATTTTAATGCGCAGGGGTGCTGCAACTTAGCCTCATTTTGAGGCACGAACCTTGACATATTGTTAGATGCTGACACCATAGTCTCATAATACTATGTGCCTAATATTTATGGGTTGGGTAGTCAGCTGGATTTAAGACCTCAACTTCTAATTGTTCAAGGTTTCTCTGGGCCGGGTCTAGATCTCTTCCATCAAATTTGCTTTATGGATTGGGTAATCATAGGAGCTAATAATCGCAATGCCTGCTTTAAATTTTGATGAGTAATTATGATCATAATCTCATAGGAACAGGTTATCTATAAATATACTTGTTATTTTACTGCCCAAGTTTTATAAGCTTTTTTGATGCTCCTGGGTTGTAATGTGGTGTACGTTCAGGGTTAAACTACTAATATATGGGAAAGCGAAATCCTACTTTCTGGGTGTTAGGCTGCAGGATACAAGTTTTATCAATTTGAAACATTGGTATTCAGTTTTTGCATGTTGTGTTTCAGTGTATGGGTTGCACGAAGACCGCCAGGCTATGCCTTCATAGATTTTGACGACCCCAGAGATGCACGGGATGCGATTCATGAATTAGATGGTACGTTGGGGATTTTCTGCTTTATGTGTGTGTGTGTGGCACTCTGTAATTGGATGGATTTTTCATTTTCTTAAGTCATTGGTGCACCGTTTCATACACTTTTTAGCAACGACATTTATGGTATGGTTTATACAGAACTTGGAAACTGTTTCATTATATGCCTATTGAATAATTGAACCAAGTTCAAGTACATGATGGATTTTCACTTTCTCATATGCCATCTTATCCAACTATTGTTTCTAATTCATTGATGAGAATTTCATAGCTTTTTGTTTTTAATATCCTATATACAAACTTTAGGGCACCCCTTACTTTAGTTTATACACTTTGCTGAATCTCCTGTGATTTTGCTCATCTTTTTTCTTCAGTCTATAGTAAATAAGCAAGTTTCCTTTTTTTCTTAAATGATATGTTGATGGTTTGTTAGCTTCACCTTCTTCATATCCATGCCGAAGTTTGTTTATGTTTCATTTTTGTCAGACAGTTCATAATTCTCAAACTTTTTTTGTTGATTTTGATTTCCATGATTTTTCTGAATGATGGTTGATATAGTTGAAGTTTTTGTTGTGACTCATTCATAGTTAAACAATTGTTAATTCTGAATCAGGGAAGAATGGCTGGAGAGTTGAACTTTCTCACAATTCTAGAGGTGGTGGAGGTGGCCGTGGAGGAGGGGGTCGTGGTCGTTCCGGTGGTTCTGATTTGAAATGCTATGAGTGTGGTGAGCCTGGGCATTTTGCTCGTGAGTGCCGTTTACGTGGTGGTGGCGGTGGCGGTGGTGCTGGAAGAAGACGTAGCCGCAGTCCTCGATACCGCCGGAGTCCAAGTTATGGTCGCAGGTCTGAACATTGAGACTGAATCCTGCCAGTTTCTTATTTGAAGTTGTTCGGATCATGCTTTTGTTAATAGTTCCCTTTGGTATTATTTATGATTTGAGGGGTTTTTGACGTCTTTATTTATTTTCAGGAGTTACAGTCCCCGTGGAAGATCTCCAAGACGTCGCAGCTTGTCACCTCGTGGGCGTAGCTTTAGTAGATCACCTCCATACCGTGGTAGAGAGGAGCTACCTTATGCCAACGGGTGAGGCTCTTCAAAAATATTTTTGCTTTGATAGATTTAATTTTTTCTACATGAATTTGTGTGCCTAGCCTGCGTGCTATATAGTTGCAGCAAAATATATGCTTCAACTTTAGGTATTTTTTGTTCTGTGGATGCATGATTTTTGGTGTTGGTTTTAACTGAGAATTTGTTTGCTGTACTGGATTGTGTGTTATTTTTTCCTTTGTTCCCCGTTGGTGGTAGATGCTCTAAGTTAGATTTTCTTTGCTACATAATTCTGTGAAGGGCCTCCACTGTTCTCCAAATCTGCAATAAGTTTTCTGCACGCATATCCTAGCATTACATCGATCTGTTTTAATTATATTCATTGTTGTGATTTGTTCTGTGTTTTAATTTTTTACAGAAATGGCATAAAGGACCGGCGCCGGAGCAGGAGCTGAAGACTACCAACTTCTCAACTTGCCTTAGTTAACACATGATGTTTAGAGGATTACTCCGAGTCTATATGTTTTTAGTGCTTGGACTTCGTATGGGACCTTTTTAAAATCGGGCGACGCCCTCAGCCTCTACTTTTGAGTTTGGATAAGTCCTTTCTATCTTCTGTTTGAATTGTTTTTCTTTTAGTTGATCAGTATAGTTGTAGGATACTAAAATATCATTAGTTCATATTTATTTTGATAATGTTATTAAGCAAATGTCTTGAAGGGCACTGCTAAAGATGTATGTTTTTTTTTCCTTGTTGAGGTGTCGTCTCGTTCTGCCTCACTGCTTTTCTGCTTCTTGTCGTCTGCTTCTGCTTCACTGCTTTTCTGCTTCTGCCCTATCCTCCGGGATTTCGTTCTACACTGCCCAGCTCTGGGATCTTCAATTTGAAAGGTTGTAGGTCCCAGCCGGCTATTGATTGAATCTCTCTGCGGTTGTCTTGCACGCTCTCATATTGTTTATGGGATTCCTTTTTAATTAACTTGATGAGGCATGAGGAACGACATCAAATGCTTCTGGCAGGTACATGAAAAACTGTTCTACAGAAGTTTGGGTTGGGATTTTTATAGAAAATCAGCTTTTTTTAAGGCATCTGCATTGCATTCTTCTCTTCGTAGCATTTACGTCATCACATTAGGAGGATGTTCTTCCATATCATTTATTATCATTTGATCTGTTTCTCCCTTGTTGTCTCTTGGTAACATCATTGATCATTTGAATCTCGAGAGTTAACTTCGCTCTACATGTGACTGTTTAGGACGTTTGCATCTCCTTAGGTATGGTTCTATTAATTGAGGGGTGATTAAGCTTTACTAGTCAGTATCTTGTGAACGGGAATTTCTTTTGAAATTTTTATTTCAATTTTTATATATTAATTTTTTTCTTGATTACGACTGCTTGTTTGGTGGGTCGGTTGTGACTGCTTGGCCACGTTGCCTGTAAGTGACTTGTCTCAAGATGAGCAACCTCTACCCAACTGAGTGCTAGTGGGAGTTCTCTTCCGTGCCACTCGATCTCCTATTTCAATGATCCTTTAGATTATCGTGTTCGTGTTCAAGTTCTGCACATCTAGCAGAGACTTGGTTCGTTTCCCATCTGCGTTCTTATCTCTCAAGAGAAACATAAGTGTTCCTGTGGGTTTGTCATCGGAAGTCGTCATGCCCGCCAGTTTCCCCTCGTCTTAGTATGCGGATGCTAGGTCCTTGTCTGCCTATACAACCATGCACGTTCTATATAATATGTAATCAAGATTTTGTAATTTGGCTTTTGCTTTATCTTTTGCGAATGTTTTTATAATTGCCAGGCTGGATCTTTTGATTTTTTAGACAACATTTGACTATCCGTAGCTGGAAATGCTAACCTCTACTTCTTTGCCTCCCAATTCATGATTCCTTTTAAATCCTTATTTTTTAATTTGATCCAAGGGTTTGGGTGAGAATATGAATATTGATTTTGATATATATATATAATGCGACATGTTTATATCTGTTATCACTGCGTTATTAATTTTCTTTAGATCCACCCTGTTCTGTTGTATTTTGGAAATTACCGTAATTTTATCATCATCAATTCTTAAATTGTTTGGTCAGTTCATAACATTTCTT

mRNA sequence

TTTACCAATTTTGAAAATTTCAAGGACTCCGACCTAAATTCGTAGGAGATATAAAGCGTTTCCGTAGTGCTCGAAACCCAAAATATCTCAACCTTGAAGAGAGAATCACGTTGAGCTGCTAGGGTTTTCTCCGGTTTCTTGTAAAGCAATGTCTCGTGTATATGTTGGGAATTTGGATCCGAGGGTCTCTGAGCGCGAGCTTGAAGATGAATTTCGTGTATTTGGAGTTATTCGAAGTGTATGGGTTGCACGAAGACCGCCAGGCTATGCCTTCATAGATTTTGACGACCCCAGAGATGCACGGGATGCGATTCATGAATTAGATGGGAAGAATGGCTGGAGAGTTGAACTTTCTCACAATTCTAGAGGTGGTGGAGGTGGCCGTGGAGGAGGGGGTCGTGGTCGTTCCGGTGGTTCTGATTTGAAATGCTATGAGTGTGGTGAGCCTGGGCATTTTGCTCGTGAGTGCCGTTTACGTGGTGGTGGCGGTGGCGGTGGTGCTGGAAGAAGACGTAGCCGCAGTCCTCGATACCGCCGGAGTCCAAGTTATGGTCGCAGTTACAGTCCCCGTGGAAGATCTCCAAGACGTCGCAGCTTGTCACCTCGTGGGCGTAGCTTTAGTAGATCACCTCCATACCGTGGTAGAGAGGAGCTACCTTATGCCAACGGAAATGGCATAAAGGACCGGCGCCGGAGCAGGAGCTGAAGACTACCAACTTCTCAACTTGCCTTAGTTAACACATGATGTTTAGAGGATTACTCCGAGTCTATATGTTTTTAGTGCTTGGACTTCGTATGGGACCTTTTTAAAATCGGGCGACGCCCTCAGCCTCTACTTTTGAGTTTGGATAAGTCCTTTCTATCTTCTGTTTGAATTGTTTTTCTTTTAGTTGATCAGTATAGTTGTAGGATACTAAAATATCATTAGTTCATATTTATTTTGATAATGTTATTAAGCAAATGTCTTGAAGGGCACTGCTAAAGATGTATGTTTTTTTTTCCTTGTTGAGGTGTCGTCTCGTTCTGCCTCACTGCTTTTCTGCTTCTTGTCGTCTGCTTCTGCTTCACTGCTTTTCTGCTTCTGCCCTATCCTCCGGGATTTCGTTCTACACTGCCCAGCTCTGGGATCTTCAATTTGAAAGGTTGTAGGTCCCAGCCGGCTATTGATTGAATCTCTCTGCGGTTGTCTTGCACGCTCTCATATTGTTTATGGGATTCCTTTTTAATTAACTTGATGAGGCATGAGGAACGACATCAAATGCTTCTGGCAGTGACTTGTCTCAAGATGAGCAACCTCTACCCAACTGAGTGCTAGTGGGAGTTCTCTTCCGTGCCACTCGATCTCCTATTTCAATGATCCTTTAGATTATCGTGTTCGTGTTCAAGTTCTGCACATCTAGCAGAGACTTGGTTCGTTTCCCATCTGCGTTCTTATCTCTCAAGAGAAACATAAGTGTTCCTGTGGGTTTGTCATCGGAAGTCGTCATGCCCGCCAGTTTCCCCTCGTCTTAGTATGCGGATGCTAGGTCCTTGTCTGCCTATACAACCATGCACGTTCTATATAATATGTAATCAAGATTTTGTAATTTGGCTTTTGCTTTATCTTTTGCGAATGTTTTTATAATTGCCAGGCTGGATCTTTTGATTTTTTAGACAACATTTGACTATCCGTAGCTGGAAATGCTAACCTCTACTTCTTTGCCTCCCAATTCATGATTCCTTTTAAATCCTTATTTTTTAATTTGATCCAAGGGTTTGGGTGAGAATATGAATATTGATTTTGATATATATATATAATGCGACATGTTTATATCTGTTATCACTGCGTTATTAATTTTCTTTAGATCCACCCTGTTCTGTTGTATTTTGGAAATTACCGTAATTTTATCATCATCAATTCTTAAATTGTTTGGTCAGTTCATAACATTTCTT

Coding sequence (CDS)

ATGTCTCGTGTATATGTTGGGAATTTGGATCCGAGGGTCTCTGAGCGCGAGCTTGAAGATGAATTTCGTGTATTTGGAGTTATTCGAAGTGTATGGGTTGCACGAAGACCGCCAGGCTATGCCTTCATAGATTTTGACGACCCCAGAGATGCACGGGATGCGATTCATGAATTAGATGGGAAGAATGGCTGGAGAGTTGAACTTTCTCACAATTCTAGAGGTGGTGGAGGTGGCCGTGGAGGAGGGGGTCGTGGTCGTTCCGGTGGTTCTGATTTGAAATGCTATGAGTGTGGTGAGCCTGGGCATTTTGCTCGTGAGTGCCGTTTACGTGGTGGTGGCGGTGGCGGTGGTGCTGGAAGAAGACGTAGCCGCAGTCCTCGATACCGCCGGAGTCCAAGTTATGGTCGCAGTTACAGTCCCCGTGGAAGATCTCCAAGACGTCGCAGCTTGTCACCTCGTGGGCGTAGCTTTAGTAGATCACCTCCATACCGTGGTAGAGAGGAGCTACCTTATGCCAACGGAAATGGCATAAAGGACCGGCGCCGGAGCAGGAGCTGA

Protein sequence

MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDGKNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGRRRSRSPRYRRSPSYGRSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIKDRRRSRS

Homology

[Close]

BLAST of Cmc04g0090311 vs. NCBI nr
Match: XP_008466294.1 (PREDICTED: serine/arginine-rich splicing factor RSZ22A [Cucumis melo])

HSP 1 Score: 362.1 bits (928), Expect = 2.9e-96
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120

Query: 121 RRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIKD 180
           RRSRSPRYRRSPSYG RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIKD
Sbjct: 121 RRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIKD 180

Query: 181 RRRSRS 186
           RRRSRS
Sbjct: 181 RRRSRS 186

[Close]

BLAST of Cmc04g0090311 vs. NCBI nr
Match: XP_022133130.1 (serine/arginine-rich splicing factor RSZ22-like [Momordica charantia])

HSP 1 Score: 355.5 bits (911), Expect = 2.7e-94
Identity = 183/188 (97.34%), Postives = 185/188 (98.40%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR--GGGGGGGA 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR  GGGGGGGA
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120

Query: 121 GRRRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGI 180
           GRRRSRSPRYRRSPSYG RSYSPRGRSPRRRSLSPRGRS+SRSPPYRGREELPYANGNG+
Sbjct: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANGNGV 180

Query: 181 KDRRRSRS 186
           KDRRRSRS
Sbjct: 181 KDRRRSRS 188

[Close]

BLAST of Cmc04g0090311 vs. NCBI nr
Match: XP_004136307.1 (serine/arginine-rich splicing factor RSZ22 [Cucumis sativus] >XP_011652534.1 serine/arginine-rich splicing factor RSZ22 [Cucumis sativus] >XP_011652535.1 serine/arginine-rich splicing factor RSZ22 [Cucumis sativus] >KGN60178.1 hypothetical protein Csa_001673 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 183/192 (95.31%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR------GGGG 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR      GGGG
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGG 120

Query: 121 GGGAGRRRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYAN 180
           GGGAGRRRSRSPRYRRSPSYG RSYSPRGRSPRRRS+SPRGRSFSRSPPYRGREE+PYAN
Sbjct: 121 GGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSVSPRGRSFSRSPPYRGREEIPYAN 180

Query: 181 GNGIKDRRRSRS 186
           GNGIKDRRRSRS
Sbjct: 181 GNGIKDRRRSRS 192

[Close]

BLAST of Cmc04g0090311 vs. NCBI nr
Match: XP_022981880.1 (serine/arginine-rich splicing factor RSZ22-like [Cucurbita maxima])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 179/187 (95.72%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR-GGGGGGGAG 120
           KNGWRVELSHNSRGGGGG  GGGRGRSGGSDLKCYECGEPGHFARECR R GGGGGGGAG
Sbjct: 61  KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRSRGGGGGGGGAG 120

Query: 121 RRRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIK 180
           RRRSRSPRYRRSPSYG RSYSPRGRSPRRRSLSPRGRS+SRSPPYRGREE+PYANGNG+K
Sbjct: 121 RRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREEVPYANGNGVK 180

Query: 181 DRRRSRS 186
           DRRRSRS
Sbjct: 181 DRRRSRS 187

[Close]

BLAST of Cmc04g0090311 vs. NCBI nr
Match: XP_022940964.1 (serine/arginine-rich splicing factor RSZ22-like [Cucurbita moschata] >XP_022940965.1 serine/arginine-rich splicing factor RSZ22-like [Cucurbita moschata])

HSP 1 Score: 345.9 bits (886), Expect = 2.2e-91
Identity = 179/189 (94.71%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR---GGGGGGG 120
           KNGWRVELSHNSRGGGGG  GGGRGRSGGSDLKCYECGEPGHFARECR R   GGGGGGG
Sbjct: 61  KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRSRGGGGGGGGGG 120

Query: 121 AGRRRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNG 180
           AGRRRSRSPRYRRSPSYG RSYSPRGRSPRRRSLSPRGRS+SRSPPYRGREE+PYANGNG
Sbjct: 121 AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREEVPYANGNG 180

Query: 181 IKDRRRSRS 186
           +KDRRRSRS
Sbjct: 181 VKDRRRSRS 189

[Close]

BLAST of Cmc04g0090311 vs. ExPASy Swiss-Prot
Match: Q9SJA6 (Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=RSZ22A PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 8.0e-73
Identity = 156/198 (78.79%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGVIRSVWVARRPPGYAF+DF+D RDARDAI E+DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGG------GGRGRSGGSDLKCYECGEPGHFARECRLRGGGG 120
           KNGWRVE SHN RGGGGGRGG      GGRGR GGSDLKCYECGE GHFARECR RGG G
Sbjct: 61  KNGWRVEQSHN-RGGGGGRGGGRGGGDGGRGR-GGSDLKCYECGESGHFARECRSRGGSG 120

Query: 121 GGGAGRRRSRS-PRYRRSPSYG--RSYSPRGRS---PRRRSLSPRGRSFSRS-PPYRGRE 180
           G    R RSRS PRYR+SP+YG  RSYSPR RS   PRRRS SPRGR++SRS PPYR R+
Sbjct: 121 GRRRSRSRSRSPPRYRKSPTYGGRRSYSPRARSPPPPRRRSPSPRGRNYSRSPPPYRARD 180

Query: 181 ELPYANGNGIKDRRRSRS 186
           E+PYANGNG+KD RRSRS
Sbjct: 181 EVPYANGNGLKDVRRSRS 196

[Close]

BLAST of Cmc04g0090311 vs. ExPASy Swiss-Prot
Match: O81126 (Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RSZ22 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.2e-72
Identity = 157/205 (76.59%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SRGGGG-----GRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGG 120
           KNGWRVE SHN   RGGGG     G GGGGRG  GGSDLKCYECGE GHFARECR R   
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNR--- 120

Query: 121 GGGGAGRRRSRS-----PRYRRSPSYG-RSYSPRGRS---PRRRSLSP---RGRSFSRS- 180
             GG GRRRS+S     PRYRRSPSYG RSYSPR RS   PRRRS SP   RGRS+SRS 
Sbjct: 121 --GGTGRRRSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSP 180

Query: 181 PPYRGREELPYANGNGIKDRRRSRS 186
           PPYR REE+PYANGNG+K+RRRSRS
Sbjct: 181 PPYRAREEVPYANGNGLKERRRSRS 200

[Close]

BLAST of Cmc04g0090311 vs. ExPASy Swiss-Prot
Match: Q69KL9 (Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ21A PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-61
Identity = 140/195 (71.79%), Postives = 154/195 (78.97%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+RVYVGNLDPRV+ RELEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DAI ++DG
Sbjct: 1   MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120
           KNGWRVELS N+       G GGR R G S+ KCYECGE GHFARECRLR G GG G+GR
Sbjct: 61  KNGWRVELSRNA-----SSGRGGRDRYGSSESKCYECGETGHFARECRLRIGSGGLGSGR 120

Query: 121 R------RSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSP-RGRSFSRSPPY-RGREELP- 180
           R      RSRSPRYRRSPSYG RSYSP GRSPRRRS+SP R RS+SRSP Y RGR+E P 
Sbjct: 121 RRSRSRSRSRSPRYRRSPSYGRRSYSPAGRSPRRRSVSPARARSYSRSPQYNRGRDESPA 180

Query: 181 YANGNGIKDRRRSRS 186
           Y NG      RRSRS
Sbjct: 181 YDNG-----YRRSRS 185

[Close]

BLAST of Cmc04g0090311 vs. ExPASy Swiss-Prot
Match: Q6K4N0 (Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZP21 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.2e-61
Identity = 134/193 (69.43%), Postives = 152/193 (78.76%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+R+YVGNLDPRV+  ELEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA DA+ +LDG
Sbjct: 1   MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120
           KNGWRVELS NS         GGR R GGS++KCYECGE GHFARECRLR G GG G+G+
Sbjct: 61  KNGWRVELSRNS------SSRGGRDRHGGSEMKCYECGETGHFARECRLRIGPGGLGSGK 120

Query: 121 R------RSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSP-RGRSFSRSPPYRGREELPYA 180
           R      RSRSP+YR+SP+YG RSYSPR RSPRRRS+SP RGRS+SRSP  RGR   PYA
Sbjct: 121 RRSRSRSRSRSPQYRKSPTYGRRSYSPRDRSPRRRSVSPVRGRSYSRSP--RGRGGSPYA 180

Query: 181 NGNGIKDRRRSRS 186
           +G      RRSRS
Sbjct: 181 DGRDGGRYRRSRS 185

[Close]

BLAST of Cmc04g0090311 vs. ExPASy Swiss-Prot
Match: Q6K9C3 (Serine/arginine-rich splicing factor RSZ23 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ23 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.3e-58
Identity = 134/206 (65.05%), Postives = 146/206 (70.87%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+RVYVGNLDPRV+ RE+EDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA DAI +LDG
Sbjct: 1   MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120
           KNGWRVELS  +   G GR   GR RSGGSD+KCYECGEPGHFARECRLR G GG G+GR
Sbjct: 61  KNGWRVELSTKA---GSGR---GRDRSGGSDMKCYECGEPGHFARECRLRIGSGGLGSGR 120

Query: 121 R---------------RSRSPRYRRSPSYGRSYSPRGRSPRRRSLS-----PRGRSFSRS 174
           R               RSRSPRYRRSPSYGR  SPR RSP+RRS S      R RS+SRS
Sbjct: 121 RRSRSRSRSPRYRGRSRSRSPRYRRSPSYGR--SPRDRSPKRRSYSRSPPPARARSYSRS 180

[Close]

BLAST of Cmc04g0090311 vs. ExPASy TrEMBL
Match: A0A1S3CQW5 (serine/arginine-rich splicing factor RSZ22A OS=Cucumis melo OX=3656 GN=LOC103503748 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120

Query: 121 RRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIKD 180
           RRSRSPRYRRSPSYG RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIKD
Sbjct: 121 RRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIKD 180

Query: 181 RRRSRS 186
           RRRSRS
Sbjct: 181 RRRSRS 186

[Close]

BLAST of Cmc04g0090311 vs. ExPASy TrEMBL
Match: A0A6J1BUF4 (serine/arginine-rich splicing factor RSZ22-like OS=Momordica charantia OX=3673 GN=LOC111005801 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 183/188 (97.34%), Postives = 185/188 (98.40%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR--GGGGGGGA 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR  GGGGGGGA
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120

Query: 121 GRRRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGI 180
           GRRRSRSPRYRRSPSYG RSYSPRGRSPRRRSLSPRGRS+SRSPPYRGREELPYANGNG+
Sbjct: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANGNGV 180

Query: 181 KDRRRSRS 186
           KDRRRSRS
Sbjct: 181 KDRRRSRS 188

[Close]

BLAST of Cmc04g0090311 vs. ExPASy TrEMBL
Match: A0A0A0LEI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881900 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.0e-94
Identity = 183/192 (95.31%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR------GGGG 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR      GGGG
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGG 120

Query: 121 GGGAGRRRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYAN 180
           GGGAGRRRSRSPRYRRSPSYG RSYSPRGRSPRRRS+SPRGRSFSRSPPYRGREE+PYAN
Sbjct: 121 GGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSVSPRGRSFSRSPPYRGREEIPYAN 180

Query: 181 GNGIKDRRRSRS 186
           GNGIKDRRRSRS
Sbjct: 181 GNGIKDRRRSRS 192

[Close]

BLAST of Cmc04g0090311 vs. ExPASy TrEMBL
Match: A0A6J1J0W6 (serine/arginine-rich splicing factor RSZ22-like OS=Cucurbita maxima OX=3661 GN=LOC111480893 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 179/187 (95.72%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR-GGGGGGGAG 120
           KNGWRVELSHNSRGGGGG  GGGRGRSGGSDLKCYECGEPGHFARECR R GGGGGGGAG
Sbjct: 61  KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRSRGGGGGGGGAG 120

Query: 121 RRRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNGIK 180
           RRRSRSPRYRRSPSYG RSYSPRGRSPRRRSLSPRGRS+SRSPPYRGREE+PYANGNG+K
Sbjct: 121 RRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREEVPYANGNGVK 180

Query: 181 DRRRSRS 186
           DRRRSRS
Sbjct: 181 DRRRSRS 187

[Close]

BLAST of Cmc04g0090311 vs. ExPASy TrEMBL
Match: A0A6J1FS77 (serine/arginine-rich splicing factor RSZ22-like OS=Cucurbita moschata OX=3662 GN=LOC111446389 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 179/189 (94.71%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLR---GGGGGGG 120
           KNGWRVELSHNSRGGGGG  GGGRGRSGGSDLKCYECGEPGHFARECR R   GGGGGGG
Sbjct: 61  KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRSRGGGGGGGGGG 120

Query: 121 AGRRRSRSPRYRRSPSYG-RSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANGNG 180
           AGRRRSRSPRYRRSPSYG RSYSPRGRSPRRRSLSPRGRS+SRSPPYRGREE+PYANGNG
Sbjct: 121 AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREEVPYANGNG 180

Query: 181 IKDRRRSRS 186
           +KDRRRSRS
Sbjct: 181 VKDRRRSRS 189

[Close]

BLAST of Cmc04g0090311 vs. TAIR 10
Match: AT2G24590.1 (RNA recognition motif and CCHC-type zinc finger domains containing protein )

HSP 1 Score: 274.6 bits (701), Expect = 5.7e-74
Identity = 156/198 (78.79%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGVIRSVWVARRPPGYAF+DF+D RDARDAI E+DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGG------GGRGRSGGSDLKCYECGEPGHFARECRLRGGGG 120
           KNGWRVE SHN RGGGGGRGG      GGRGR GGSDLKCYECGE GHFARECR RGG G
Sbjct: 61  KNGWRVEQSHN-RGGGGGRGGGRGGGDGGRGR-GGSDLKCYECGESGHFARECRSRGGSG 120

Query: 121 GGGAGRRRSRS-PRYRRSPSYG--RSYSPRGRS---PRRRSLSPRGRSFSRS-PPYRGRE 180
           G    R RSRS PRYR+SP+YG  RSYSPR RS   PRRRS SPRGR++SRS PPYR R+
Sbjct: 121 GRRRSRSRSRSPPRYRKSPTYGGRRSYSPRARSPPPPRRRSPSPRGRNYSRSPPPYRARD 180

Query: 181 ELPYANGNGIKDRRRSRS 186
           E+PYANGNG+KD RRSRS
Sbjct: 181 EVPYANGNGLKDVRRSRS 196

[Close]

BLAST of Cmc04g0090311 vs. TAIR 10
Match: AT4G31580.1 (serine/arginine-rich 22 )

HSP 1 Score: 271.9 bits (694), Expect = 3.7e-73
Identity = 157/205 (76.59%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SRGGGG-----GRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGG 120
           KNGWRVE SHN   RGGGG     G GGGGRG  GGSDLKCYECGE GHFARECR R   
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNR--- 120

Query: 121 GGGGAGRRRSRS-----PRYRRSPSYG-RSYSPRGRS---PRRRSLSP---RGRSFSRS- 180
             GG GRRRS+S     PRYRRSPSYG RSYSPR RS   PRRRS SP   RGRS+SRS 
Sbjct: 121 --GGTGRRRSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSP 180

Query: 181 PPYRGREELPYANGNGIKDRRRSRS 186
           PPYR REE+PYANGNG+K+RRRSRS
Sbjct: 181 PPYRAREEVPYANGNGLKERRRSRS 200

[Close]

BLAST of Cmc04g0090311 vs. TAIR 10
Match: AT4G31580.2 (serine/arginine-rich 22 )

HSP 1 Score: 271.9 bits (694), Expect = 3.7e-73
Identity = 157/205 (76.59%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SRGGGG-----GRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGG 120
           KNGWRVE SHN   RGGGG     G GGGGRG  GGSDLKCYECGE GHFARECR R   
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNR--- 120

Query: 121 GGGGAGRRRSRS-----PRYRRSPSYG-RSYSPRGRS---PRRRSLSP---RGRSFSRS- 180
             GG GRRRS+S     PRYRRSPSYG RSYSPR RS   PRRRS SP   RGRS+SRS 
Sbjct: 121 --GGTGRRRSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSP 180

Query: 181 PPYRGREELPYANGNGIKDRRRSRS 186
           PPYR REE+PYANGNG+K+RRRSRS
Sbjct: 181 PPYRAREEVPYANGNGLKERRRSRS 200

[Close]

BLAST of Cmc04g0090311 vs. TAIR 10
Match: AT1G23860.1 (RS-containing zinc finger protein 21 )

HSP 1 Score: 214.5 bits (545), Expect = 7.0e-56
Identity = 127/194 (65.46%), Postives = 139/194 (71.65%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+RVYVGNLDPRV+ERELEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI  LD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120
           KNGWRVELSH  +   GGRGGGG  R G  D KCYECGE GHFARECR      G G+ R
Sbjct: 61  KNGWRVELSHKDK---GGRGGGGGRRGGIEDSKCYECGELGHFARECR-----RGRGSVR 120

Query: 121 RRSRSPRYRRSPSYG---RSYSPRGR--SPRRRSLSP--RGRSFSRSPPYRGR------- 175
           RRS SPR RRSP YG   RS SPRGR   PRRRS++P  RGRS+SRSPPYRG        
Sbjct: 121 RRSPSPRRRRSPDYGYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSPRR 180

[Close]

BLAST of Cmc04g0090311 vs. TAIR 10
Match: AT1G23860.2 (RS-containing zinc finger protein 21 )

HSP 1 Score: 214.5 bits (545), Expect = 7.0e-56
Identity = 127/194 (65.46%), Postives = 139/194 (71.65%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+RVYVGNLDPRV+ERELEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI  LD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGAGR 120
           KNGWRVELSH  +   GGRGGGG  R G  D KCYECGE GHFARECR      G G+ R
Sbjct: 61  KNGWRVELSHKDK---GGRGGGGGRRGGIEDSKCYECGELGHFARECR-----RGRGSVR 120

Query: 121 RRSRSPRYRRSPSYG---RSYSPRGR--SPRRRSLSP--RGRSFSRSPPYRGR------- 175
           RRS SPR RRSP YG   RS SPRGR   PRRRS++P  RGRS+SRSPPYRG        
Sbjct: 121 RRSPSPRRRRSPDYGYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSPRR 180

The following BLAST results are available for this feature:

BLAST of Cmc04g0090311 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466294.1	2.9e-96	99.46	PREDICTED: serine/arginine-rich splicing factor RSZ22A [Cucumis melo]	[more]
XP_022133130.1	2.7e-94	97.34	serine/arginine-rich splicing factor RSZ22-like [Momordica charantia]	[more]
XP_004136307.1	1.0e-93	95.31	serine/arginine-rich splicing factor RSZ22 [Cucumis sativus] >XP_011652534.1 ser...	[more]
XP_022981880.1	1.3e-91	95.72	serine/arginine-rich splicing factor RSZ22-like [Cucurbita maxima]	[more]
XP_022940964.1	2.2e-91	94.71	serine/arginine-rich splicing factor RSZ22-like [Cucurbita moschata] >XP_0229409...	[more]

BLAST of Cmc04g0090311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJA6	8.0e-73	78.79	Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
O81126	5.2e-72	76.59	Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
Q69KL9	1.4e-61	71.79	Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=3...	[more]
Q6K4N0	9.2e-61	69.43	Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q6K9C3	7.3e-58	65.05	Serine/arginine-rich splicing factor RSZ23 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Cmc04g0090311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQW5	1.4e-96	99.46	serine/arginine-rich splicing factor RSZ22A OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A6J1BUF4	1.3e-94	97.34	serine/arginine-rich splicing factor RSZ22-like OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LEI3	5.0e-94	95.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881900 PE=4 SV=1	[more]
A0A6J1J0W6	6.1e-92	95.72	serine/arginine-rich splicing factor RSZ22-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FS77	1.0e-91	94.71	serine/arginine-rich splicing factor RSZ22-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cmc04g0090311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24590.1	5.7e-74	78.79	RNA recognition motif and CCHC-type zinc finger domains containing protein	[more]
AT4G31580.1	3.7e-73	76.59	serine/arginine-rich 22	[more]
AT4G31580.2	3.7e-73	76.59	serine/arginine-rich 22	[more]
AT1G23860.1	7.0e-56	65.46	RS-containing zinc finger protein 21	[more]
AT1G23860.2	7.0e-56	65.46	RS-containing zinc finger protein 21	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 93..109 e-value: 7.9E-5 score: 32.0
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 93..108 e-value: 7.2E-8 score: 32.2
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 93..108 score: 10.971343
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 3..69 e-value: 9.2E-18 score: 75.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 4..61 e-value: 6.4E-16 score: 58.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..73 score: 16.107859
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..73 e-value: 9.2E-20 score: 72.7
None	No IPR available	GENE3D	4.10.60.10		coord: 82..153 e-value: 1.3E-7 score: 33.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..185
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 2..177
None	No IPR available	PANTHER	PTHR23147:SF184	SERINE/ARGININE-RICH SPLICING FACTOR RSZ22A-LIKE ISOFORM X1	coord: 2..177
None	No IPR available	CDD	cd12373	RRM_SRSF3_like	coord: 3..71 e-value: 2.38832E-34 score: 114.255
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 86..109
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0090311.1	Cmc04g0090311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding