Cmc04g0089591 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0089591
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptioncircumsporozoite protein-like
LocationCMiso1.1chr04: 1959905 .. 1961299 (+)
RNA-Seq ExpressionCmc04g0089591
SyntenyCmc04g0089591
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAAAACATTAGAAGACGAAAAAAGAAAATGAGAAAATATAATCCGAAGAATGAAGAAATTAAATGGGCCCGGTCCAAAAAGGCCCAAAAGCTGTGGGCCCAAAGAGGAAGCTGAAGCTGTTTATGTGTTTTTTGAAAAAGACGAAGTACTGTTGAAATGCACATGGGGAAAGCGTAGGGGCACACAAAGCGACAACCCTACAAATCCCTTTGCGTTTGTTTTCTTCCTTTTTCATTATGGAAAGGAAACCCCAATTCATTTTTATTTAGGAAAAGAAGAAAAAGCTACAATCTCCAGCTGTATTCGACTCCATTATTATTACCTTCCATTAAAGCGTTTTTTCATTTCTCAAGGTTAGTTTAGTTTAGTACCTTCTTCGCCAGTTTCGCCGCCGCTATCGTCTCTCCGATTCGCGGAAGCTCGGCCGGAAGAGGAAAATGTGAACATAGAGATAGATCCGGCAGATTAAGAGATGATATAAGATCTAATTAGTAATGATAGTAACAATGAGAATGGAGTACAAATCGACTAAAGAACGGTAATAAAACAAAGAAATTCAAATAAATAACAATAATCATCAAGCGGCCACCGTCTAATCCTCTCGGTCCCTAAGTACACCAAAAATAAGAGTAGAATAAAAAATATACTAAGAAAACTACAACAACGACTAATGCCGACAATGAAACCCTAAGATCTGCGTCTCCAGAGGAAAGCGAAGAGTGAAGATAGACTGATTGCATTTTAAAATAGTAGAGCGGAGGAAATTATAGCGGCTATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCAGGGGTGGAGGTTGGCGACGGAGCCAGTGCAGGAGGATTTGAGATGGAAGAAGATGGAACCGGAGTCATGACTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTATGGTGGAAGGAGAGGGAGCAAAGCCGGACGGAGCGAGGGATGAAGATGGAGGAGTGGCCACTGCTGGTGGAGGAGCAGATTTAGGAGAGGAGACTGGCGGCGATTTGGTTGGAGAAGAGGCCGGTGCGGCGCCCGGAGCTTGGCCAAGAGAGGCGGCGATTAAAGCTAAGAGAACAACGAAGACGAAGGCTGAGGATGAAGCCATGGTCGTGAAGAAGAATGGGAAGAGCAGAGAGAGGAAGATGGAAGAGAGAAGAGAGAAGTTTGAGCTGAAGAGGTTGAAGATGAGAGAAGAGGAGGGTTTTGCAATTGCTTATACCTATATATAATATCAACAAACACACGCGTCGGCGCGTGTGAATTGTGGAGGGAAGAAGGGAGACTGAGTCAGTCGTCGCATTGGTCAAAGTTAGTTTGACGGTGTTAAG

mRNA sequence

TTGAAAACATTAGAAGACGAAAAAAGAAAATGAGAAAATATAATCCGAAGAATGAAGAAATTAAATGGGCCCGGTCCAAAAAGGCCCAAAAGCTGTGGGCCCAAAGAGGAAGCTGAAGCTGTTTATGTGTTTTTTGAAAAAGACGAAGTACTGTTGAAATGCACATGGGGAAAGCGTAGGGGCACACAAAGCGACAACCCTACAAATCCCTTTGCGTTTGTTTTCTTCCTTTTTCATTATGGAAAGGAAACCCCAATTCATTTTTATTTAGGAAAAGAAGAAAAAGCTACAATCTCCAGCTGTATTCGACTCCATTATTATTACCTTCCATTAAAGCGTTTTTTCATTTCTCAAGGTTAGTTTAGTTTAGTACCTTCTTCGCCAGTTTCGCCGCCGCTATCGTCTCTCCGATTCGCGGAAGCTCGGCCGGAAGAGGAAAATGTGAACATAGAGATAGATCCGGCAGATTAAGAGATGATATAAGATCTAATTAGTAATGATAGTAACAATGAGAATGGAGTACAAATCGACTAAAGAACGGTAATAAAACAAAGAAATTCAAATAAATAACAATAATCATCAAGCGGCCACCGTCTAATCCTCTCGGTCCCTAAGTACACCAAAAATAAGAGTAGAATAAAAAATATACTAAGAAAACTACAACAACGACTAATGCCGACAATGAAACCCTAAGATCTGCGTCTCCAGAGGAAAGCGAAGAGTGAAGATAGACTGATTGCATTTTAAAATAGTAGAGCGGAGGAAATTATAGCGGCTATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCAGGGGTGGAGGTTGGCGACGGAGCCAGTGCAGGAGGATTTGAGATGGAAGAAGATGGAACCGGAGTCATGACTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTATGGTGGAAGGAGAGGGAGCAAAGCCGGACGGAGCGAGGGATGAAGATGGAGGAGTGGCCACTGCTGGTGGAGGAGCAGATTTAGGAGAGGAGACTGGCGGCGATTTGGTTGGAGAAGAGGCCGGTGCGGCGCCCGGAGCTTGGCCAAGAGAGGCGGCGATTAAAGCTAAGAGAACAACGAAGACGAAGGCTGAGGATGAAGCCATGGTCGTGAAGAAGAATGGGAAGAGCAGAGAGAGGAAGATGGAAGAGAGAAGAGAGAAGTTTGAGCTGAAGAGGTTGAAGATGAGAGAAGAGGAGGGTTTTGCAATTGCTTATACCTATATATAATATCAACAAACACACGCGTCGGCGCGTGTGAATTGTGGAGGGAAGAAGGGAGACTGAGTCAGTCGTCGCATTGGTCAAAGTTAGTTTGACGGTGTTAAG

Coding sequence (CDS)

ATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCAGGGGTGGAGGTTGGCGACGGAGCCAGTGCAGGAGGATTTGAGATGGAAGAAGATGGAACCGGAGTCATGACTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTATGGTGGAAGGAGAGGGAGCAAAGCCGGACGGAGCGAGGGATGAAGATGGAGGAGTGGCCACTGCTGGTGGAGGAGCAGATTTAGGAGAGGAGACTGGCGGCGATTTGGTTGGAGAAGAGGCCGGTGCGGCGCCCGGAGCTTGGCCAAGAGAGGCGGCGATTAAAGCTAAGAGAACAACGAAGACGAAGGCTGAGGATGAAGCCATGGTCGTGAAGAAGAATGGGAAGAGCAGAGAGAGGAAGATGGAAGAGAGAAGAGAGAAGTTTGAGCTGAAGAGGTTGAAGATGAGAGAAGAGGAGGGTTTTGCAATTGCTTATACCTATATATAA

Protein sequence

MIDPETAILFTEAPLPGVEVGDGASAGGFEMEEDGTGVMTGESEGAVGGAGGEEAGAIAGGEVMVEGEGAKPDGARDEDGGVATAGGGADLGEETGGDLVGEEAGAAPGAWPREAAIKAKRTTKTKAEDEAMVVKKNGKSRERKMEERREKFELKRLKMREEEGFAIAYTYI
Homology
BLAST of Cmc04g0089591 vs. NCBI nr
Match: KGN60236.1 (hypothetical protein Csa_001434 [Cucumis sativus])

HSP 1 Score: 224.9 bits (572), Expect = 5.2e-55
Identity = 127/145 (87.59%), Postives = 136/145 (93.79%), Query Frame = 0

Query: 1   MIDPETAILFTEAPLPGVEVGDGASAGGFEMEEDGTGVMTGESEGAVGGAGGEEAGAIAG 60
           MIDPETAILFT+APLPGV+VGDGASAGGFEMEEDGTGV+ GESEGAVGGAGGEEAGAIAG
Sbjct: 1   MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAG 60

Query: 61  GEVMVEGEGAKPDGAR-DEDGGVATAGGGADLGEETGGDLVGEEAGAAPGAWPREAAIKA 120
           GEV V+G GA PDGAR ++DGGVAT GGGADLGEE G DLVGEEAGAAPGAWPREAAIKA
Sbjct: 61  GEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKA 120

Query: 121 KRTTKTKAEDEAMVVKKNGKSRERK 145
           KRTTKTKAE+EAMVVKKNGK RE++
Sbjct: 121 KRTTKTKAEEEAMVVKKNGKRREKR 145

BLAST of Cmc04g0089591 vs. NCBI nr
Match: XP_022136125.1 (circumsporozoite protein-like [Momordica charantia])

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32
Identity = 102/154 (66.23%), Postives = 107/154 (69.48%), Query Frame = 0

Query: 1   MIDPETAILFTEAPLPGVEVGDGASAGGFEMEEDGTGVMTGESEGAVGGAGGEEAGAIAG 60
           MIDP  A LF  APLPGVE GDGA  GGF +E  G GV  GESEGAVGGAGGEEAGA AG
Sbjct: 1   MIDPVPATLFKAAPLPGVEAGDGACDGGFAIEVSGVGVDAGESEGAVGGAGGEEAGAEAG 60

Query: 61  GEVMVEGEGAKPDGARDED----GGVATAGGGADLGEETGGDLVGEEAGAAPGAWPREAA 120
           GEV VEG G  P GA DED    GGVATA GGA  G++ GG LVGEEAGAAPGAWP+E A
Sbjct: 61  GEVPVEGAGETPAGAGDEDGVDAGGVATAVGGAAFGDDAGGGLVGEEAGAAPGAWPKEPA 120

Query: 121 IKAKRTTKTKAEDEAMVVKKNGKSRERKMEERRE 151
            KA  T  TKAE EAM V KN + RE     R E
Sbjct: 121 TKANSTKNTKAE-EAMAV-KNAQRREENGRRRSE 152

BLAST of Cmc04g0089591 vs. NCBI nr
Match: KAF5444827.1 (hypothetical protein F2P56_033926 [Juglans regia])

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-05
Identity = 61/113 (53.98%), Postives = 67/113 (59.29%), Query Frame = 0

Query: 3   DPETAILFTEAPL-PGVEVGDGASAGGFEMEEDGT-GVMTGESEGA--VGGAGGEEAGAI 62
           DP   ILFT APL PG  VGD  S GG  +E  GT G + G   G   V GAGGE AGA+
Sbjct: 6   DPVVVILFTAAPLPPGEPVGD--SVGGLPIEVVGTVGELVGTFAGGDDVRGAGGELAGAL 65

Query: 63  AGGEVMVEGEGAKPDGAR-DEDGGVATAGGGADLGEETGGDLVGEEAGAAPGA 111
           AG  V+V G GA+  G    ED GV   GGG  +GEE GGDLV    GAAPGA
Sbjct: 66  AGALVVV-GAGAEAGGDMVGEDVGVKVRGGGEAVGEEAGGDLV----GAAPGA 111

BLAST of Cmc04g0089591 vs. ExPASy TrEMBL
Match: A0A0A0LJM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889920 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.5e-55
Identity = 127/145 (87.59%), Postives = 136/145 (93.79%), Query Frame = 0

Query: 1   MIDPETAILFTEAPLPGVEVGDGASAGGFEMEEDGTGVMTGESEGAVGGAGGEEAGAIAG 60
           MIDPETAILFT+APLPGV+VGDGASAGGFEMEEDGTGV+ GESEGAVGGAGGEEAGAIAG
Sbjct: 1   MIDPETAILFTKAPLPGVDVGDGASAGGFEMEEDGTGVIIGESEGAVGGAGGEEAGAIAG 60

Query: 61  GEVMVEGEGAKPDGAR-DEDGGVATAGGGADLGEETGGDLVGEEAGAAPGAWPREAAIKA 120
           GEV V+G GA PDGAR ++DGGVAT GGGADLGEE G DLVGEEAGAAPGAWPREAAIKA
Sbjct: 61  GEVAVKGAGATPDGARGEDDGGVATVGGGADLGEEAGDDLVGEEAGAAPGAWPREAAIKA 120

Query: 121 KRTTKTKAEDEAMVVKKNGKSRERK 145
           KRTTKTKAE+EAMVVKKNGK RE++
Sbjct: 121 KRTTKTKAEEEAMVVKKNGKRREKR 145

BLAST of Cmc04g0089591 vs. ExPASy TrEMBL
Match: A0A6J1C301 (circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111007891 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.8e-33
Identity = 102/154 (66.23%), Postives = 107/154 (69.48%), Query Frame = 0

Query: 1   MIDPETAILFTEAPLPGVEVGDGASAGGFEMEEDGTGVMTGESEGAVGGAGGEEAGAIAG 60
           MIDP  A LF  APLPGVE GDGA  GGF +E  G GV  GESEGAVGGAGGEEAGA AG
Sbjct: 1   MIDPVPATLFKAAPLPGVEAGDGACDGGFAIEVSGVGVDAGESEGAVGGAGGEEAGAEAG 60

Query: 61  GEVMVEGEGAKPDGARDED----GGVATAGGGADLGEETGGDLVGEEAGAAPGAWPREAA 120
           GEV VEG G  P GA DED    GGVATA GGA  G++ GG LVGEEAGAAPGAWP+E A
Sbjct: 61  GEVPVEGAGETPAGAGDEDGVDAGGVATAVGGAAFGDDAGGGLVGEEAGAAPGAWPKEPA 120

Query: 121 IKAKRTTKTKAEDEAMVVKKNGKSRERKMEERRE 151
            KA  T  TKAE EAM V KN + RE     R E
Sbjct: 121 TKANSTKNTKAE-EAMAV-KNAQRREENGRRRSE 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN60236.15.2e-5587.59hypothetical protein Csa_001434 [Cucumis sativus][more]
XP_022136125.11.6e-3266.23circumsporozoite protein-like [Momordica charantia][more]
KAF5444827.11.3e-0553.98hypothetical protein F2P56_033926 [Juglans regia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJM12.5e-5587.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889920 PE=4 SV=1[more]
A0A6J1C3017.8e-3366.23circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111007891 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0089591.1Cmc04g0089591.1mRNA