Cmc04g0089211 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0089211
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Poly(A)-specific ribonuclease
Location	CMiso1.1chr04: 1616334 .. 1617062 (+)
RNA-Seq Expression	Cmc04g0089211
Synteny	Cmc04g0089211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTCACCCAAGAATTGGCCATTCTCAACGACCAACTTTTCAAGTTGCCAATGATCGTGATGGACACTGAGTTCCTTGGCTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATAAGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACATCAATCCAATATTTGAAGAACAACAAATGGTTTGAATTCAAGAAACATAGGAAATACAGAATTCCATCGGCTGAATTTCGACGTGCATTTTTGCCGATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTCCATGGCATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGCCAGAGTCCATGGTGGAATTTGCCACCATAGCTCAACGTCAGCTTGGTACAGTGAACGACCTCAAGCACATGATTTGCAATTGTGAACACTTAATGAACGGTGAACTGGGACTTAAGAGACTTGCTGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGTTTGCTGATAGCTTTGGCGTATGTGAAGATGAAGAAGATGCTCAAGTGGCTTTGGCGTATGCGAAGATGA

mRNA sequence

ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTCACCCAAGAATTGGCCATTCTCAACGACCAACTTTTCAAGTTGCCAATGATCGTGATGGACACTGAGTTCCTTGGCTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATAAGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACATCAATCCAATATTTGAAGAACAACAAATGGTTTGAATTCAAGAAACATAGGAAATACAGAATTCCATCGGCTGAATTTCGACGTGCATTTTTGCCGATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTCCATGGCATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGCCAGAGTCCATGGTGGAATTTGCCACCATAGCTCAACGTCAGCTTGGTACAGTGAACGACCTCAAGCACATGATTTGCAATTGTGAACACTTAATGAACGGTGAACTGGGACTTAAGAGACTTGCTGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGTTTGCTGATAGCTTTGGCGTATGTGAAGATGAAGAAGATGCTCAAGTGGCTTTGGCGTATGCGAAGATGA

Coding sequence (CDS)

ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTCACCCAAGAATTGGCCATTCTCAACGACCAACTTTTCAAGTTGCCAATGATCGTGATGGACACTGAGTTCCTTGGCTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATAAGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACATCAATCCAATATTTGAAGAACAACAAATGGTTTGAATTCAAGAAACATAGGAAATACAGAATTCCATCGGCTGAATTTCGACGTGCATTTTTGCCGATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTCCATGGCATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGCCAGAGTCCATGGTGGAATTTGCCACCATAGCTCAACGTCAGCTTGGTACAGTGAACGACCTCAAGCACATGATTTGCAATTGTGAACACTTAATGAACGGTGAACTGGGACTTAAGAGACTTGCTGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGTTTGCTGATAGCTTTGGCGTATGTGAAGATGAAGAAGATGCTCAAGTGGCTTTGGCGTATGCGAAGATGA

Protein sequence

MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR

Homology

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BLAST of Cmc04g0089211 vs. NCBI nr
Match: XP_008466654.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >KAA0038652.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa] >TYK31255.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 493.4 bits (1269), Expect = 1.1e-135
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60
           MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN
Sbjct: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60

Query: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120
           HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI
Sbjct: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120

Query: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180
           PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV
Sbjct: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180

Query: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM 240
           NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM
Sbjct: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM 240

Query: 241 RR 243
           RR
Sbjct: 241 RR 242

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BLAST of Cmc04g0089211 vs. NCBI nr
Match: KAA0044544.1 (putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 429.9 bits (1104), Expect = 1.5e-116
Identity = 216/236 (91.53%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60
           MSFVRQVWYHNLTQEL ILNDQLFK P+I MDTEF GFLRST RGAPEEH YQDLKFNLN
Sbjct: 1   MSFVRQVWYHNLTQELVILNDQLFKFPVIAMDTEFPGFLRSTLRGAPEEHFYQDLKFNLN 60

Query: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120
           HLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN K FEFKK RK  I
Sbjct: 61  HLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGI 120

Query: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180
           PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTV
Sbjct: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTV 180

Query: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW 237
           NDLKHMI NCE+LMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Sbjct: 181 NDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKF 236

[Close]

BLAST of Cmc04g0089211 vs. NCBI nr
Match: XP_008454486.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >TYK17039.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 429.9 bits (1104), Expect = 1.5e-116
Identity = 215/236 (91.10%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60
           MSFVR+VWYHN  QELAILNDQLFK P+I MDTEF GFLRSTPRGAPEEH YQDLKFNLN
Sbjct: 1   MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLN 60

Query: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120
           HLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN K FEFKK RK  I
Sbjct: 61  HLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGI 120

Query: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180
           PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTV
Sbjct: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTV 180

Query: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW 237
           NDLKHMI NCE+LMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Sbjct: 181 NDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKF 236

[Close]

BLAST of Cmc04g0089211 vs. NCBI nr
Match: XP_004151393.1 (putative CCR4-associated factor 1 homolog 8 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 2.1e-110
Identity = 203/231 (87.88%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 3   FVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHL 62
           FVRQVWYHNL QELAILND LFK P+IVMDTEF GFLRSTPRGAP+EHLYQDLKFN+NHL
Sbjct: 4   FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHL 63

Query: 63  KILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPS 122
           KILQLGLTLMD+NEHVGLSWVFTFSDFDEQTD SSPTS+QYLKNNK FEFKK RK  IPS
Sbjct: 64  KILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPS 123

Query: 123 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVND 182
           AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFA IAQR LGTVND
Sbjct: 124 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVND 183

Query: 183 LKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKM 234
           LK+MI +CE LM GELGLKRLAELL+VNDT+F+GGSDSLLIALAYVKMKK+
Sbjct: 184 LKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKL 234

[Close]

BLAST of Cmc04g0089211 vs. NCBI nr
Match: KAE8649090.1 (hypothetical protein Csa_014788 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 2.1e-110
Identity = 203/231 (87.88%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 3   FVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHL 62
           FVRQVWYHNL QELAILND LFK P+IVMDTEF GFLRSTPRGAP+EHLYQDLKFN+NHL
Sbjct: 4   FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHL 63

Query: 63  KILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPS 122
           KILQLGLTLMD+NEHVGLSWVFTFSDFDEQTD SSPTS+QYLKNNK FEFKK RK  IPS
Sbjct: 64  KILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPS 123

Query: 123 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVND 182
           AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFA IAQR LGTVND
Sbjct: 124 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVND 183

Query: 183 LKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKM 234
           LK+MI +CE LM GELGLKRLAELL+VNDT+F+GGSDSLLIALAYVKMKK+
Sbjct: 184 LKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKL 234

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BLAST of Cmc04g0089211 vs. ExPASy Swiss-Prot
Match: O64773 (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.0e-27
Identity = 83/229 (36.24%), Postives = 121/229 (52.84%), Query Frame = 0


Query: 6   QVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKIL 65
           +VW  N   E+  + D L     I +DTEF G L+ TP  A +E  Y+D+KFN+++  ++
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 66  QLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEF 125
           QLGLTL  K   +  +W    SDF+E     +  SI +LKNN   +  K R+  I   EF
Sbjct: 64  QLGLTLFGKG--ITKTWEINLSDFNESKSLKNDKSIAFLKNN-GLDLDKIREEGIGIEEF 123

Query: 126 RRAFLPIFSSNR-ITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGT-VNDL 185
              F  I +      +W+TF G YD AYLLK +  + +PE+  EF    Q+ LG  V D+
Sbjct: 124 FMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDV 183

Query: 186 KHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKM 231
           K M   C  L +   GL+R+A++L +       + GSDS L A  + K+
Sbjct: 184 KKMAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228

[Close]

BLAST of Cmc04g0089211 vs. ExPASy Swiss-Prot
Match: Q9SHJ0 (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.7e-27
Identity = 76/233 (32.62%), Postives = 125/233 (53.65%), Query Frame = 0


Query: 5   RQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKI 64
           R+VW  N+ +E+A + + L + P+I  DTE+ G +  T   +  +  Y+ +K N+ + K+
Sbjct: 10  RRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENTKL 69

Query: 65  LQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAE 124
           +Q G TL +    +G  W   FS+F + +D  +  SI++L+ +   + +K R   +    
Sbjct: 70  IQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRH-GLDLQKIRDEGVDM-- 129

Query: 125 FRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 184
           F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFAT   +  G V
Sbjct: 130 FGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQV 189

Query: 185 NDLKHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMK 232
            D K M   CE L    LGL +LA+LL +       + GSDSL+ AL ++K+K
Sbjct: 190 YDTKVMAGFCEGL-GEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLK 238

[Close]

BLAST of Cmc04g0089211 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.7e-27
Identity = 79/248 (31.85%), Postives = 131/248 (52.82%), Query Frame = 0


Query: 4   VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDL 63
           +R+VW HNL QE+A++   +   P + MDTEF G +  T    P         E+ Y  L
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 64  KFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSDFDEQTDFSSPTSIQYLKNNK 123
           K N+N LK++QLGLTL D+  ++          W F F +F+  +D  +  SI+ L+ + 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSA 135

Query: 124 WFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESM 183
             + +K+ +  + +  F    +   +  +++I  W+TFH  YD  YLLKL+  + +PE +
Sbjct: 136 -IDLEKNNECGVDAKRFAELLMGSGVVLNDKI-HWVTFHCGYDFGYLLKLLSGKELPEEI 195

Query: 184 VEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIA 233
            +F    ++    V D+K+++  C +L     GL+++AELL V         GSDSLL  
Sbjct: 196 SDFFDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTL 255

[Close]

BLAST of Cmc04g0089211 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 8.7e-27
Identity = 80/243 (32.92%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 4   VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRG---APEEHLYQDLKFNLN 63
           +R+VW  NL  E+A++ + +   P + MDTEF G +   P G      E+ Y+ LK N+N
Sbjct: 12  IREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIV-CRPVGTFKTNTEYHYETLKTNVN 71

Query: 64  HLKILQLGLTLMDKNEHVGLS--------WVFTFSDFDEQTDFSSPTSIQYLKNNKWFEF 123
            LK++QLGLT  D+  ++           W F F +FD ++D  +  SI+ L+ +   +F
Sbjct: 72  ILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQS-GIDF 131

Query: 124 KKHRKYRIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAT 183
            K+ ++ I S  F    +      N    W+TFH  YD  YLLKL+  + +PE+   F  
Sbjct: 132 VKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFE 191

Query: 184 IAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVK 233
           +       V D+KH++  C  L     GL +LAELL+V         GSDSLL +  + K
Sbjct: 192 MISVYFPRVYDIKHLMKFCNSLHG---GLNKLAELLDVERVGICHQAGSDSLLTSCTFRK 249

[Close]

BLAST of Cmc04g0089211 vs. ExPASy Swiss-Prot
Match: Q9LXM4 (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.7e-27
Identity = 78/218 (35.78%), Postives = 117/218 (53.67%), Query Frame = 0


Query: 16  LAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKN 75
           ++++ D L     I +DTEF   LR T + A +E  Y D+ F+++  K++QLGLTL D N
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 76  EHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIP-SAEFRRAFLPIFS 135
             +G +W   FSDF    D  +  SI++L+ N   + +K R+  I     F   F  +  
Sbjct: 61  GRIGGTWEINFSDFGVD-DARNEKSIEFLRRN-GLDLRKIREEGIRIEGFFSEMFWMLKK 120

Query: 136 SNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLM 195
           + R   W+TFHG YD+AYLLK      +P +   F+    R LG+V DLK M   CE L 
Sbjct: 121 TRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL- 180

Query: 196 NGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKM 231
           +  LGL+ LA    +N   T  + GS++ L A+ + K+
Sbjct: 181 SSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKV 215

[Close]

BLAST of Cmc04g0089211 vs. ExPASy TrEMBL
Match: A0A5A7T5A7 (Putative CCR4-associated factor 1-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005440 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.3e-136
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60
           MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN
Sbjct: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60

Query: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120
           HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI
Sbjct: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120

Query: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180
           PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV
Sbjct: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180

Query: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM 240
           NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM
Sbjct: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM 240

Query: 241 RR 243
           RR
Sbjct: 241 RR 242

[Close]

BLAST of Cmc04g0089211 vs. ExPASy TrEMBL
Match: A0A1S3CRS2 (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103504009 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.3e-136
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60
           MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN
Sbjct: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60

Query: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120
           HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI
Sbjct: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120

Query: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180
           PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV
Sbjct: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180

Query: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM 240
           NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM
Sbjct: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM 240

Query: 241 RR 243
           RR
Sbjct: 241 RR 242

[Close]

BLAST of Cmc04g0089211 vs. ExPASy TrEMBL
Match: A0A5A7TN62 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002920 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.2e-117
Identity = 216/236 (91.53%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60
           MSFVRQVWYHNLTQEL ILNDQLFK P+I MDTEF GFLRST RGAPEEH YQDLKFNLN
Sbjct: 1   MSFVRQVWYHNLTQELVILNDQLFKFPVIAMDTEFPGFLRSTLRGAPEEHFYQDLKFNLN 60

Query: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120
           HLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN K FEFKK RK  I
Sbjct: 61  HLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGI 120

Query: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180
           PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTV
Sbjct: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTV 180

Query: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW 237
           NDLKHMI NCE+LMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Sbjct: 181 NDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKF 236

[Close]

BLAST of Cmc04g0089211 vs. ExPASy TrEMBL
Match: A0A5D3D333 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001870 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.2e-117
Identity = 215/236 (91.10%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60
           MSFVR+VWYHN  QELAILNDQLFK P+I MDTEF GFLRSTPRGAPEEH YQDLKFNLN
Sbjct: 1   MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLN 60

Query: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120
           HLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN K FEFKK RK  I
Sbjct: 61  HLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGI 120

Query: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180
           PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTV
Sbjct: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTV 180

Query: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW 237
           NDLKHMI NCE+LMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Sbjct: 181 NDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKF 236

[Close]

BLAST of Cmc04g0089211 vs. ExPASy TrEMBL
Match: A0A1S3BY95 (Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494884 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.2e-117
Identity = 215/236 (91.10%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN 60
           MSFVR+VWYHN  QELAILNDQLFK P+I MDTEF GFLRSTPRGAPEEH YQDLKFNLN
Sbjct: 1   MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLN 60

Query: 61  HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI 120
           HLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN K FEFKK RK  I
Sbjct: 61  HLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGI 120

Query: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 180
           PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTV
Sbjct: 121 PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTV 180

Query: 181 NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW 237
           NDLKHMI NCE+LMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Sbjct: 181 NDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKF 236

[Close]

BLAST of Cmc04g0089211 vs. TAIR 10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-28
Identity = 83/229 (36.24%), Postives = 121/229 (52.84%), Query Frame = 0


Query: 6   QVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKIL 65
           +VW  N   E+  + D L     I +DTEF G L+ TP  A +E  Y+D+KFN+++  ++
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 66  QLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEF 125
           QLGLTL  K   +  +W    SDF+E     +  SI +LKNN   +  K R+  I   EF
Sbjct: 64  QLGLTLFGKG--ITKTWEINLSDFNESKSLKNDKSIAFLKNN-GLDLDKIREEGIGIEEF 123

Query: 126 RRAFLPIFSSNR-ITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGT-VNDL 185
              F  I +      +W+TF G YD AYLLK +  + +PE+  EF    Q+ LG  V D+
Sbjct: 124 FMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDV 183

Query: 186 KHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKM 231
           K M   C  L +   GL+R+A++L +       + GSDS L A  + K+
Sbjct: 184 KKMAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228

[Close]

BLAST of Cmc04g0089211 vs. TAIR 10
Match: AT1G06450.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.7e-28
Identity = 76/233 (32.62%), Postives = 125/233 (53.65%), Query Frame = 0


Query: 5   RQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKI 64
           R+VW  N+ +E+A + + L + P+I  DTE+ G +  T   +  +  Y+ +K N+ + K+
Sbjct: 10  RRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENTKL 69

Query: 65  LQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAE 124
           +Q G TL +    +G  W   FS+F + +D  +  SI++L+ +   + +K R   +    
Sbjct: 70  IQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRH-GLDLQKIRDEGVDM-- 129

Query: 125 FRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV 184
           F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFAT   +  G V
Sbjct: 130 FGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQV 189

Query: 185 NDLKHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMK 232
            D K M   CE L    LGL +LA+LL +       + GSDSL+ AL ++K+K
Sbjct: 190 YDTKVMAGFCEGL-GEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLK 238

[Close]

BLAST of Cmc04g0089211 vs. TAIR 10
Match: AT1G15920.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 6.2e-28
Identity = 79/248 (31.85%), Postives = 131/248 (52.82%), Query Frame = 0


Query: 4   VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDL 63
           +R+VW HNL QE+A++   +   P + MDTEF G +  T    P         E+ Y  L
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 64  KFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSDFDEQTDFSSPTSIQYLKNNK 123
           K N+N LK++QLGLTL D+  ++          W F F +F+  +D  +  SI+ L+ + 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSA 135

Query: 124 WFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESM 183
             + +K+ +  + +  F    +   +  +++I  W+TFH  YD  YLLKL+  + +PE +
Sbjct: 136 -IDLEKNNECGVDAKRFAELLMGSGVVLNDKI-HWVTFHCGYDFGYLLKLLSGKELPEEI 195

Query: 184 VEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIA 233
            +F    ++    V D+K+++  C +L     GL+++AELL V         GSDSLL  
Sbjct: 196 SDFFDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTL 255

[Close]

BLAST of Cmc04g0089211 vs. TAIR 10
Match: AT1G15920.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 6.2e-28
Identity = 79/248 (31.85%), Postives = 131/248 (52.82%), Query Frame = 0


Query: 4   VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDL 63
           +R+VW HNL QE+A++   +   P + MDTEF G +  T    P         E+ Y  L
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 64  KFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSDFDEQTDFSSPTSIQYLKNNK 123
           K N+N LK++QLGLTL D+  ++          W F F +F+  +D  +  SI+ L+ + 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSA 135

Query: 124 WFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESM 183
             + +K+ +  + +  F    +   +  +++I  W+TFH  YD  YLLKL+  + +PE +
Sbjct: 136 -IDLEKNNECGVDAKRFAELLMGSGVVLNDKI-HWVTFHCGYDFGYLLKLLSGKELPEEI 195

Query: 184 VEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIA 233
            +F    ++    V D+K+++  C +L     GL+++AELL V         GSDSLL  
Sbjct: 196 SDFFDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTL 255

[Close]

BLAST of Cmc04g0089211 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 6.2e-28
Identity = 80/243 (32.92%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 4   VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRG---APEEHLYQDLKFNLN 63
           +R+VW  NL  E+A++ + +   P + MDTEF G +   P G      E+ Y+ LK N+N
Sbjct: 12  IREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIV-CRPVGTFKTNTEYHYETLKTNVN 71

Query: 64  HLKILQLGLTLMDKNEHVGLS--------WVFTFSDFDEQTDFSSPTSIQYLKNNKWFEF 123
            LK++QLGLT  D+  ++           W F F +FD ++D  +  SI+ L+ +   +F
Sbjct: 72  ILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQS-GIDF 131

Query: 124 KKHRKYRIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAT 183
            K+ ++ I S  F    +      N    W+TFH  YD  YLLKL+  + +PE+   F  
Sbjct: 132 VKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFE 191

Query: 184 IAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVK 233
           +       V D+KH++  C  L     GL +LAELL+V         GSDSLL +  + K
Sbjct: 192 MISVYFPRVYDIKHLMKFCNSLHG---GLNKLAELLDVERVGICHQAGSDSLLTSCTFRK 249

The following BLAST results are available for this feature:

BLAST of Cmc04g0089211 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466654.1	1.1e-135	100.00	PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >KAA003865...	[more]
KAA0044544.1	1.5e-116	91.53	putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]	[more]
XP_008454486.1	1.5e-116	91.10	PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >TYK17039....	[more]
XP_004151393.1	2.1e-110	87.88	putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]	[more]
KAE8649090.1	2.1e-110	87.88	hypothetical protein Csa_014788 [Cucumis sativus]	[more]

BLAST of Cmc04g0089211 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64773	3.0e-27	36.24	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SHJ0	6.7e-27	32.62	Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9S9P2	8.7e-27	31.85	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SKZ2	8.7e-27	32.92	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LXM4	8.7e-27	35.78	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Cmc04g0089211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5A7	5.3e-136	100.00	Putative CCR4-associated factor 1-like protein 8 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CRS2	5.3e-136	100.00	putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103504...	[more]
A0A5A7TN62	7.2e-117	91.53	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3D333	7.2e-117	91.10	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BY95	7.2e-117	91.10	Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494884 PE=3 SV=1	[more]

BLAST of Cmc04g0089211 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61470.1	2.1e-28	36.24	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G06450.1	4.7e-28	32.62	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G15920.2	6.2e-28	31.85	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G15920.1	6.2e-28	31.85	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G32070.1	6.2e-28	32.92	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..241 e-value: 9.4E-52 score: 177.7
None	No IPR available	PANTHER	PTHR10797:SF57	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 3-RELATED	coord: 3..236
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 3..236
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 4..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0089211.1	Cmc04g0089211.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity