Cmc04g0088971 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0088971
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr04: 1374526 .. 1375464 (-)
RNA-Seq Expression	Cmc04g0088971
Synteny	Cmc04g0088971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAAAGTGTGGTTTTTATTTGTCAAATGCTTGAAGGATTTAAGAAATGTGACTCGTGTTTACAAGAATGGGCAATTTGCATAGTCCAATTACGGATAATCGTTCTAAATGATGATCAAAACTATAAGTCTAATGGAAACACTAAAACGAATTCGCACAACGAATAACCAACGGTTCTAAATTTCATCGAATTGTTTTCATGAGTTCTATGGATTGATTCATTGCTTGAGTATAGTTAGATAGATTTTCTATTAATAAATTTGATTCTTCTTTTTTTTTTTTTCTTAAATGCAGAAAGAACTCCTAGGGTTCTACTCCGGAGCAAGAAGCAACAACATCCAATTCTTGATTCAAACACATCAATCGAGATGCAATTCGTTAAAGAAAACAGTTTCCAGATACCATAGTTAACAAAAATAGAGATTGAAAAACCACACAATTGCCTCAACAAAAGTTCAATCAAAACGTCGATGATACAGATGATAATACAGGAAAAACAAAAGAAAAGAGGAATTACTAGTGTTACTCGCTAGTAAGCGGTGCTTGAGCAGATGAAGAAGTCGAGACTATCTCGACATTTTCATCGCCGGAGACGGATGAAATCAAGGTCCAGTCTGGTGGAAGAGGCGGCAGAGGAGGGTACACAGTCGGCTTACGCCGAATGTCCCATGGCTGAGATTTCTTTGGCCTTGTTTTCATGTGATGTGCTGTCGCCTTCTTGTTTGGCCTCGACGAACATTCAATCAGCAAATTTCCGCCGGAGCATGGAGCTGCTTTGCTTGCAGATGAGTTCAACAATGGCGGAACCGAAATCTTACAGCCCAAAAATGTGGAAATCGACATTGTTCCTTCAGAGCGAGAGCGTCAGAAAGGCAAATACAAACCTATCAAATGGGATTACATTCGTTATCTTCGTTTTTCTTTTTTTTCTCATTTGA

mRNA sequence

TTTCAAAGTGTGGTTTTTATTTGTCAAATGCTTGAAGGATTTAAGAAATGTGACTCGTGTTTACAAGAATGGGCAATTTGCATAGTCCAATTACGGATAATCGTTCTAAATGATGATCAAAACTATAAGTCTAATGGAAACACTAAAACGAATTCGCACAACGAATAACCAACGAAAGAACTCCTAGGGTTCTACTCCGGAGCAAGAAGCAACAACATCCAATTCTTGATTCAAACACATCAATCGAGATGCAATTCGTTAAAGAAAACAGTTTCCAGATACCATAGTTAACAAAAATAGAGATTGAAAAACCACACAATTGCCTCAACAAAAGTTCAATCAAAACGTCGATGATACAGATGATAATACAGGAAAAACAAAAGAAAAGAGGAATTACTAGTGTTACTCGCTAGTAAGCGGTGCTTGAGCAGATGAAGAAGTCGAGACTATCTCGACATTTTCATCGCCGGAGACGGATGAAATCAAGGTCCAGTCTGGTGGAAGAGGCGGCAGAGGAGGGTACACAGTCGGCTTACGCCGAATGTCCCATGGCTGAGATTTCTTTGGCCTTGTTTTCATGTGATGTGCTGTCGCCTTCTTGTTTGGCCTCGACGAACATTCAATCAGCAAATTTCCGCCGGAGCATGGAGCTGCTTTGCTTGCAGATGAGTTCAACAATGGCGGAACCGAAATCTTACAGCCCAAAAATGTGGAAATCGACATTGTTCCTTCAGAGCGAGAGCGTCAGAAAGGCAAATACAAACCTATCAAATGGGATTACATTCGTTATCTTCGTTTTTCTTTTTTTTCTCATTTGA

Coding sequence (CDS)

ATGAAGAAGTCGAGACTATCTCGACATTTTCATCGCCGGAGACGGATGAAATCAAGGTCCAGTCTGGTGGAAGAGGCGGCAGAGGAGGGTACACAGTCGGCTTACGCCGAATGTCCCATGGCTGAGATTTCTTTGGCCTTGTTTTCATGTGATGTGCTGTCGCCTTCTTGTTTGGCCTCGACGAACATTCAATCAGCAAATTTCCGCCGGAGCATGGAGCTGCTTTGCTTGCAGATGAGTTCAACAATGGCGGAACCGAAATCTTACAGCCCAAAAATGTGGAAATCGACATTGTTCCTTCAGAGCGAGAGCGTCAGAAAGGCAAATACAAACCTATCAAATGGGATTACATTCGTTATCTTCGTTTTTCTTTTTTTTCTCATTTGA

Protein sequence

MKKSRLSRHFHRRRRMKSRSSLVEEAAEEGTQSAYAECPMAEISLALFSCDVLSPSCLASTNIQSANFRRSMELLCLQMSSTMAEPKSYSPKMWKSTLFLQSESVRKANTNLSNGITFVIFVFLFFLI

Homology

The following BLAST results are available for this feature:

BLAST of Cmc04g0088971 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0088971 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0088971 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0088971 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0088971.1	Cmc04g0088971.1	mRNA