Cmc04g0088821 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0088821
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Auxin-responsive protein
Location	CMiso1.1chr04: 1316066 .. 1319442 (+)
RNA-Seq Expression	Cmc04g0088821
Synteny	Cmc04g0088821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCAAAATTTTTCTGTTTTGCTTCTTCACACACACACACACACACACATATATTTATTTTTGAGAAGATGGTTTGAAGCATAACAATAACTCTTTTTTCTTTTTCTTTCAAGCTCAATTTATAACCTTTTCTTAGAAGAGAGAAATGGTCAGATGTCCTGAGCTTCTTGACCTGATCTCCAGGGACAGGGAATGGGATTTGACTAGAAATGGTGTTGGAAGTTCTGTTATTGAGAATAATAAACTTGAATTGAGACTTGGATTGCCAGGAGAAGAGGGGCTTGCAGAAGCAAGTAGTTGTTTGAATAGTAACCATGAAAATGGTGAAATCTCTCTTTCTTCTGCCAGGCCATTTTCTTCTTGTTTGAACATAAGAAGCAATAAAAGGGCTCTTTATGCAAAAACTGAAGGAATAGCAGGAGATGGAAATCGGTTGGATAGAAATGATGAATTCCAACCCCACAAGCTGATTTTCTATGAGAAAACAGCTGAGAAGGTGTCTCCTTTCACTCCTTGTCTGAGTGCTTCCTTACCATCTTCAGCTTTTCAGAGGGAAGCTCAGAAGTTATCTCAACCATCACAATCTTCATATTTGAAACATTTATTGATGCCTCAGAACTTGGATTTGGTGTCAGAGGAGCCATCAAAGCCAAAAGCAACTGAGTTGAACTCATGTCTCAACAGTAATTCAGTTCCTGCAGAATCATCTGAAACTAAACACCATGACAAAAGGTTAGTCAGCTTTATCTTCTTTTATATCCTATTTTCTAATCATTCATATCAAACTCTACTTTTTAAGCGATGATATCTCATTTCAGTTATAATTTGTATCTCCGAACTATTATTACGTGTTTCATCAACCTAAATAATCCACCAACTTTCTTAAATTGGTTTTTGTTAAGTTGAAATGAAGGTTGGACTTTCTTTAGTGCCTTTTCTGTTTAAACTGTTTCTTGAAATCTTGGAAGGTTGAATTCACTTGCAGCTGAAGTTTTGTATGGATTATATTACAAGGGAAAAACAGGTTCTGATATCCTAAGAAGTATCCATGATATCACGAAGCGGACATGGCGACACATCCTATTTTAAAAATCTAGGACATAACACAAATACTTTAAAAAATATACATTATTTTTACTCTAAAAGAAAATTCAAAGTCAACGGTTTGATCCATTTCTAAGTTTGAAAAACTTATCTCAATGTAGTTTACACTAAAAAGTTATTTATTATTGTCTCGGTTCTATGCATATCTAACACATTTGTTACGTCCTATCTGTGTCAAACAAGCGTGGGAGTGTCCAAGTATCCGACAAGGGTCAAACAGAAACAAGCTAGCCAAACGAAAATTTTTGTGCTTCTTTGCTGATATCCAAGCCTCTATACCTCTATCTGGCTTAAGATCACTTCAAATACACAAGTTTCAGCTACAACGGGTTGGTTTCATGTAGCTCGGGAACTTGTTGTGGAAGATTCTAAAAGTGATCTAGTTGATAACCAAACTAAATATTGGAAAAATAGATTTCTTTTTGCTGATAATTAGGCATTTTCTCATTTCAGAACTAGTTTTAACTTCAAAATGCATATGGCTTACAAGTTTTTTCAAGAAAACAAGTAATGCTAAGTTGCTAATTGTAAGGAATTATTCAACATCTTGTCAATAGGGCTTCAGTTGCAGCAGCCGTTGGTTGGCCTCCCATCCCTTCTTTCAGGAAAAACTTCGCTGTTCCCCGCTCTTCAAAGCCTAACTCTCTGGAATTGTCAAAAGAAACTTTGCAGGATGAAAATGGCTCAAGATTATCTGACTGCTCCAATGGACAAATGTTTGTGAAAGTTTGTATGGATGGGGTTCCCATTGGAAGAAAACTAAATCTCCAAGCCTATAATAGTTATGATCAACTCTCTGCTGGAATAGACGAACTCTTCCACAGTCTTCTTGCAGGTATAATCCCTCAATGCCCTGCATTTCATTGATATTTGTCCAACACTACATATATATGATAATATTAAGCTTCCTGTTTGATAGTTTTTTTCTTTCGTCGAATCTTATGTTTGTTTCTTCCCAATTTTCTTAATCTTAGTTTTCTTCGTTATTAAGTAAACATTTAAATTCTTAGTTGAATTTCAAAAACAAAAACTACGTTTGTTTAGTTCAGTTTGGTAACCATTTGTTTTTTGTTTTTAGTTTTTGAAAATCAAGCCTATAAAAAACCTCTAAATTTCGTGTTTTGTTATCTACTTTGAAAGAATTAGTTTTTTTTTTTTTGAAATTTAGCTAAGAATTCAACTTTTGCATTTAAGAAAGACTAAGAAATTGAGAGTAAATACGCTTAATTTTCTAAAACCGAAAACAAAAGATGGATTGGTTACCAATTTTGTAAGGTTGGTTTGGTTTTTGAGAAATGAGTAGCAAGTGGATAATATAAAAGAAATTAACTTATAGTAGAAAGTAGACTTTATAAGCCTCAGTTTCAAATGCTAAAACCAAAAAACCAAATAGTAATCAAACCTGGCCTGAATTTGAAATCTCTACCTCCTTGTTCTTATTTTCTTCTTCCTTATTAACTACAGCTCAGAGAAACTATCTAGCAGCTGAAGATGGGAGAAAGATGGAGGAAACAACTTCAGTATCTGATTCCAAACACAAAAATGGGCTGTATACTCTAGTTTACTACGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAAGTAAGCATTTCCCACTACTGGTGTTGTAGCTTAAGTCATCTAGCATTTCTTGATCAAATCCGACGCAATCTTAGAAAAAAGGGTCCTTTTTAGCGTTATTTTGCATCAATCTTAACAGTTTGTTAAAATGCTTCCTTCCTTGCTGTACAGTATATGAAATAAGAACTTTCTTGGTGTAGTAGATTTATTTGCTTCATTTTCATGCAGGATGTTTGTTTCCACTGTGAAGAGGCTACGTGTATTGAAGAGTTCTGTTTTTGCCACTGAAATGAAATGAAACTCCTTTCAAAATTCAAACACAAACATCTGAAAGGTACAAGAAATGTTCTTGTCAAAAAGCAATTTTGAGTAGCAATGGCAACAGTTTATGTCAAAGAGTGAATGTCAGCTAGGATTTTCCCATGTAGATTTTTTGTTTTCCCTCACTTCTATAGATTTTGGCAGTGATATCAAGCTGCAAGGTGTAAGCGCAGCCTTGGCTTTCAAGGTTGAGGCAACTGCTGTTGTGTGTATATATATTCTGTTTCTTCAGAAATATGAGTTTTGATTTTGAATTCTTCTTGGGAATTTACTGCATCCTATATAAGTCTTGATTCTAAACTTAAATTTCAGACATCTTGGGTAACAGAAATTCCTTTACCAGTGTACGAAATATTTCAA

mRNA sequence

CATCCAAAATTTTTCTGTTTTGCTTCTTCACACACACACACACACACACATATATTTATTTTTGAGAAGATGGTTTGAAGCATAACAATAACTCTTTTTTCTTTTTCTTTCAAGCTCAATTTATAACCTTTTCTTAGAAGAGAGAAATGGTCAGATGTCCTGAGCTTCTTGACCTGATCTCCAGGGACAGGGAATGGGATTTGACTAGAAATGGTGTTGGAAGTTCTGTTATTGAGAATAATAAACTTGAATTGAGACTTGGATTGCCAGGAGAAGAGGGGCTTGCAGAAGCAAGTAGTTGTTTGAATAGTAACCATGAAAATGGTGAAATCTCTCTTTCTTCTGCCAGGCCATTTTCTTCTTGTTTGAACATAAGAAGCAATAAAAGGGCTCTTTATGCAAAAACTGAAGGAATAGCAGGAGATGGAAATCGGTTGGATAGAAATGATGAATTCCAACCCCACAAGCTGATTTTCTATGAGAAAACAGCTGAGAAGGTGTCTCCTTTCACTCCTTGTCTGAGTGCTTCCTTACCATCTTCAGCTTTTCAGAGGGAAGCTCAGAAGTTATCTCAACCATCACAATCTTCATATTTGAAACATTTATTGATGCCTCAGAACTTGGATTTGGTGTCAGAGGAGCCATCAAAGCCAAAAGCAACTGAGTTGAACTCATGTCTCAACAGTAATTCAGTTCCTGCAGAATCATCTGAAACTAAACACCATGACAAAAGGGCTTCAGTTGCAGCAGCCGTTGGTTGGCCTCCCATCCCTTCTTTCAGGAAAAACTTCGCTGTTCCCCGCTCTTCAAAGCCTAACTCTCTGGAATTGTCAAAAGAAACTTTGCAGGATGAAAATGGCTCAAGATTATCTGACTGCTCCAATGGACAAATGTTTGTGAAAGTTTGTATGGATGGGGTTCCCATTGGAAGAAAACTAAATCTCCAAGCCTATAATAGTTATGATCAACTCTCTGCTGGAATAGACGAACTCTTCCACAGTCTTCTTGCAGCTCAGAGAAACTATCTAGCAGCTGAAGATGGGAGAAAGATGGAGGAAACAACTTCAGTATCTGATTCCAAACACAAAAATGGGCTGTATACTCTAGTTTACTACGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAAGATGTTTGTTTCCACTGTGAAGAGGCTACGTGTATTGAAGAGTTCTGTTTTTGCCACTGAAATGAAATGAAACTCCTTTCAAAATTCAAACACAAACATCTGAAAGGTACAAGAAATGTTCTTGTCAAAAAGCAATTTTGAGTAGCAATGGCAACAGTTTATGTCAAAGAGTGAATGTCAGCTAGGATTTTCCCATGTAGATTTTTTGTTTTCCCTCACTTCTATAGATTTTGGCAGTGATATCAAGCTGCAAGGTGTAAGCGCAGCCTTGGCTTTCAAGGTTGAGGCAACTGCTGTTGTGTGTATATATATTCTGTTTCTTCAGAAATATGAGTTTTGATTTTGAATTCTTCTTGGGAATTTACTGCATCCTATATAAGTCTTGATTCTAAACTTAAATTTCAGACATCTTGGGTAACAGAAATTCCTTTACCAGTGTACGAAATATTTCAA

Coding sequence (CDS)

ATGGTCAGATGTCCTGAGCTTCTTGACCTGATCTCCAGGGACAGGGAATGGGATTTGACTAGAAATGGTGTTGGAAGTTCTGTTATTGAGAATAATAAACTTGAATTGAGACTTGGATTGCCAGGAGAAGAGGGGCTTGCAGAAGCAAGTAGTTGTTTGAATAGTAACCATGAAAATGGTGAAATCTCTCTTTCTTCTGCCAGGCCATTTTCTTCTTGTTTGAACATAAGAAGCAATAAAAGGGCTCTTTATGCAAAAACTGAAGGAATAGCAGGAGATGGAAATCGGTTGGATAGAAATGATGAATTCCAACCCCACAAGCTGATTTTCTATGAGAAAACAGCTGAGAAGGTGTCTCCTTTCACTCCTTGTCTGAGTGCTTCCTTACCATCTTCAGCTTTTCAGAGGGAAGCTCAGAAGTTATCTCAACCATCACAATCTTCATATTTGAAACATTTATTGATGCCTCAGAACTTGGATTTGGTGTCAGAGGAGCCATCAAAGCCAAAAGCAACTGAGTTGAACTCATGTCTCAACAGTAATTCAGTTCCTGCAGAATCATCTGAAACTAAACACCATGACAAAAGGGCTTCAGTTGCAGCAGCCGTTGGTTGGCCTCCCATCCCTTCTTTCAGGAAAAACTTCGCTGTTCCCCGCTCTTCAAAGCCTAACTCTCTGGAATTGTCAAAAGAAACTTTGCAGGATGAAAATGGCTCAAGATTATCTGACTGCTCCAATGGACAAATGTTTGTGAAAGTTTGTATGGATGGGGTTCCCATTGGAAGAAAACTAAATCTCCAAGCCTATAATAGTTATGATCAACTCTCTGCTGGAATAGACGAACTCTTCCACAGTCTTCTTGCAGCTCAGAGAAACTATCTAGCAGCTGAAGATGGGAGAAAGATGGAGGAAACAACTTCAGTATCTGATTCCAAACACAAAAATGGGCTGTATACTCTAGTTTACTACGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAAGATGTTTGTTTCCACTGTGAAGAGGCTACGTGTATTGAAGAGTTCTGTTTTTGCCACTGAAATGAAATGA

Protein sequence

MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENGEISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSPFTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK

Homology

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BLAST of Cmc04g0088821 vs. NCBI nr
Match: XP_008466078.1 (PREDICTED: auxin-responsive protein IAA18-like [Cucumis melo] >KAA0038627.1 auxin-responsive protein IAA18-like [Cucumis melo var. makuwa] >TYK31226.1 auxin-responsive protein IAA18-like [Cucumis melo var. makuwa])

HSP 1 Score: 712.6 bits (1838), Expect = 1.7e-201
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP
Sbjct: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS 180
           FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS
Sbjct: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS 180

Query: 181 NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR 240
           NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR
Sbjct: 181 NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR 240

Query: 241 LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR 300
           LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR
Sbjct: 241 LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR 300

Query: 301 KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK 360
           KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK
Sbjct: 301 KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK 360

[Close]

BLAST of Cmc04g0088821 vs. NCBI nr
Match: XP_004136228.1 (auxin-responsive protein IAA26 isoform X1 [Cucumis sativus] >KGN60312.1 hypothetical protein Csa_002077 [Cucumis sativus])

HSP 1 Score: 661.8 bits (1706), Expect = 3.5e-186
Identity = 339/363 (93.39%), Postives = 345/363 (95.04%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG     EASSCLN NHENG
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG-----EASSCLNGNHENG 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           EISLSSA+PFSSC NIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIF+EKTAEKVSP
Sbjct: 61  EISLSSAKPFSSCFNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFHEKTAEKVSP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATELNSC 180
           FTPCLSASLPSSAF REAQKLSQPSQSSYLKH+LMPQNLDLVSEE SKP   KATELNSC
Sbjct: 121 FTPCLSASLPSSAFHREAQKLSQPSQSSYLKHVLMPQNLDLVSEESSKPCSLKATELNSC 180

Query: 181 LNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDEN 240
           LN  SVPAESSETKHHDKRASV+AAVGWPPI SFRKNFAVPRSSKPNSLE SKET+QDEN
Sbjct: 181 LNDGSVPAESSETKHHDKRASVSAAVGWPPIRSFRKNFAVPRSSKPNSLESSKETVQDEN 240

Query: 241 GSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE 300
           GS+LSDC NGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE
Sbjct: 241 GSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE 300

Query: 301 DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFAT 360
           DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSV AT
Sbjct: 301 DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVVAT 358

[Close]

BLAST of Cmc04g0088821 vs. NCBI nr
Match: XP_038896900.1 (auxin-responsive protein IAA6-like [Benincasa hispida])

HSP 1 Score: 641.7 bits (1654), Expect = 3.7e-180
Identity = 328/363 (90.36%), Postives = 332/363 (91.46%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           MVRCPELLDLISRDREWDLTRNGVGSSV ENNKLELRLGLPGE GLAE SSCLNSNHENG
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVSENNKLELRLGLPGEVGLAEGSSCLNSNHENG 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           E  LSSA+PF SCLNIRSNKRALY K EGI GDGN LDRNDEFQPHKLIFYEKTAEKVSP
Sbjct: 61  EFPLSSAKPFPSCLNIRSNKRALYEKAEGITGDGNWLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATELNSC 180
            TPCLSASLPSSAFQREAQKLSQP+QSSYLK   MPQ LDLVSEEP KP   K  EL SC
Sbjct: 121 PTPCLSASLPSSAFQREAQKLSQPAQSSYLKQFFMPQKLDLVSEEPLKPCSLKTAELKSC 180

Query: 181 LNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDEN 240
           LNS SVPAESSE KHHDKRASVAAAVGWPPI SFRKNFA PRSSKPNSLELSKET+QDEN
Sbjct: 181 LNSGSVPAESSEPKHHDKRASVAAAVGWPPIRSFRKNFAAPRSSKPNSLELSKETVQDEN 240

Query: 241 GSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE 300
           GS+LSDCS GQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFH LLAAQRNYLA E
Sbjct: 241 GSKLSDCSKGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHCLLAAQRNYLATE 300

Query: 301 DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFAT 360
           DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPW MFVSTVKRLRVLKSSV AT
Sbjct: 301 DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLKSSVVAT 360

[Close]

BLAST of Cmc04g0088821 vs. NCBI nr
Match: XP_031738423.1 (auxin-responsive protein IAA26 isoform X2 [Cucumis sativus])

HSP 1 Score: 570.5 bits (1469), Expect = 1.0e-158
Identity = 301/363 (82.92%), Postives = 306/363 (84.30%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG     EASSCLN NHENG
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG-----EASSCLNGNHENG 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           EISLSSA+PFSSC NIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIF+EKTAEK   
Sbjct: 61  EISLSSAKPFSSCFNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFHEKTAEK--- 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATELNSC 180
                                                NLDLVSEE SKP   KATELNSC
Sbjct: 121 -------------------------------------NLDLVSEESSKPCSLKATELNSC 180

Query: 181 LNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDEN 240
           LN  SVPAESSETKHHDKRASV+AAVGWPPI SFRKNFAVPRSSKPNSLE SKET+QDEN
Sbjct: 181 LNDGSVPAESSETKHHDKRASVSAAVGWPPIRSFRKNFAVPRSSKPNSLESSKETVQDEN 240

Query: 241 GSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE 300
           GS+LSDC NGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE
Sbjct: 241 GSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE 300

Query: 301 DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFAT 360
           DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSV AT
Sbjct: 301 DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVVAT 318

[Close]

BLAST of Cmc04g0088821 vs. NCBI nr
Match: KAG7024609.1 (Auxin-responsive protein IAA18 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 539.7 bits (1389), Expect = 2.0e-149
Identity = 287/368 (77.99%), Postives = 305/368 (82.88%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           M R PELLDLIS DREW+L R GVGSSV ENNKLELRLGLPGEE LAE SSCLN +HE+ 
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           E  LSSA+ F SCLNIRSNKRAL                 DEF+PHKL+F EKTAEKV+P
Sbjct: 61  ESHLSSAKLFPSCLNIRSNKRALC----------------DEFRPHKLVFSEKTAEKVAP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATEL--- 180
              CL ASLPSSAFQREAQKLSQPSQS YL+HLLMPQ LDLVSEEPSK    K  E    
Sbjct: 121 LIHCLGASLPSSAFQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYS 180

Query: 181 --NSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKET 240
              SCLN+ SVPAESSE KHHDKRASVA+AVGWPPI SFRKNFA PRSSKPNSL LSKE 
Sbjct: 181 TGKSCLNNGSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEA 240

Query: 241 LQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300
           LQDENGS+LS CSNGQMFVKVCMDG+PIGRKLNLQAYN YDQLSAGIDELFH LLA QRN
Sbjct: 241 LQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRN 300

Query: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 360
           YLAAEDGRK+EETTS+SDSKH+NGLYTLVYYDNEGDRMLVGDVPW MFVSTVKRLRVL++
Sbjct: 301 YLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRN 352

[Close]

BLAST of Cmc04g0088821 vs. ExPASy Swiss-Prot
Match: Q8LQ74 (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.9e-35
Identity = 120/368 (32.61%), Postives = 167/368 (45.38%), Query Frame = 0


Query: 5   PELLDLISRDREWDLTR-------NGVGSSVIENNKLELRLGLPG--EEGLAEASSCLNS 64
           P+LLDLI  ++EW L            G    E+ KL+L+LGLPG  E+  AE       
Sbjct: 13  PQLLDLIPDEKEWKLREALGLGRSRNAGFDGEEDKKLDLKLGLPGFIEDDEAETLRDYRL 72

Query: 65  NHENGEISLS----SARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFY 124
             E+  +SLS     ++  SS       KR      E         D+ + +   K    
Sbjct: 73  QQESPSLSLSFFPKHSKTTSSTTTTTGAKRGFIDTVE---------DKTEGYNDQK---- 132

Query: 125 EKTAEKVSPFTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEE-----P 184
                                          Q +++   K L + + +  VSE      P
Sbjct: 133 -------------------------------QQARAGCGKELAVEEMIAAVSERKKGCCP 192

Query: 185 SKPKATELNSCLNSNSVPAESSETKHHDK-RASVAAAVGWPPIPSFRKNFAVPRSSKPNS 244
             P           +  PA  +  +   + R + A  VGWPPI SFR+N A   SSK   
Sbjct: 193 PPPP---------PHGAPATPARNRPQTQGRGAAAPVVGWPPIRSFRRNLASSSSSKH-- 252

Query: 245 LELSKETLQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHS 304
              S E   D   ++++        VK+ MDG+PIGRK++L AYNSYD LS+ + +LFH 
Sbjct: 253 ---SPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHG 312

Query: 305 LLAAQRNYLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVK 354
            L AQ++   A+  ++  +          +G YTLVY D+EGDRMLVGDVPWK+FVST K
Sbjct: 313 FLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAK 322

[Close]

BLAST of Cmc04g0088821 vs. ExPASy Swiss-Prot
Match: Q8LAL2 (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-34
Identity = 98/230 (42.61%), Postives = 130/230 (56.52%), Query Frame = 0


Query: 146 QSSYLKHLLMPQNLDLVSEEPSKPKATELNS-----------CLNSNSV-PAESSETKHH 205
           Q   L+  L P   D       K K TE+ +           C N N   P+  + +  H
Sbjct: 34  QEKKLELRLGPPGGDEEDHSAIKKKNTEIRNIKKETEDKSFHCFNGNHFSPSNKTTSVPH 93

Query: 206 --DKRASVAAAVGWPPIPSFRKNFAVPRSSK-PNSLELSKETLQDENGSRLSDCSNGQMF 265
              KR +    VGWPP+ SFRKN A   SSK  N      +  + ++G +  +     MF
Sbjct: 94  ISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMF 153

Query: 266 VKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGRKMEE-TTSVS 325
           VK+ MDGVPIGRK++L AYNSY+QLS  +D+LF  LLAAQR+     DG+  E+    + 
Sbjct: 154 VKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD---ISDGQGEEKPIIGLL 213

Query: 326 DSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEM 360
           D K   G +TL Y DNEGD+MLVGDVPW+MFVS+VKRLRV+KSS  ++ +
Sbjct: 214 DGK---GEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSAL 257

[Close]

BLAST of Cmc04g0088821 vs. ExPASy Swiss-Prot
Match: O24408 (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-34
Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 0


Query: 161 LVSEEPSKPKATELNSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRS 220
           ++     +PK   + S       P+ +  T H  KR +    VGWPP+ SFRKN A   S
Sbjct: 58  MIRHMKKEPKDKSILSLAGKYFSPSSTKTTSH--KRTAPGPVVGWPPVRSFRKNLASGSS 117

Query: 221 SK--PNSLELSKETLQDENGSRLSDCS----NGQMFVKVCMDGVPIGRKLNLQAYNSYDQ 280
           SK   +S   +  TL+++     +  +     G MFVK+ M GVPIGRK++L A+NSY+Q
Sbjct: 118 SKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQ 177

Query: 281 LSAGIDELFHSLLAAQRNYLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGD 340
           LS  +D+LF  LLAAQR++ ++     +E+   ++     NG YTL Y DNEGD+MLVGD
Sbjct: 178 LSFTVDKLFRGLLAAQRDFPSS-----IEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGD 237

Query: 341 VPWKMFVSTVKRLRVLKSSVFATEM 360
           VPW+MFVS+VKRLRV+K+S  ++ +
Sbjct: 238 VPWQMFVSSVKRLRVIKTSEISSAL 255

[Close]

BLAST of Cmc04g0088821 vs. ExPASy Swiss-Prot
Match: Q5W670 (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.4e-33
Identity = 74/164 (45.12%), Postives = 101/164 (61.59%), Query Frame = 0


Query: 196 RASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSRLSDCSNGQMFVKVCM 255
           R ++   VGWPPI SFR+N      +  +S + S E   DE   +       +  VK+ M
Sbjct: 162 RGAIPPVVGWPPIRSFRRNL-----TNGSSFKQSPERQNDEADDKAKPICKKRPLVKINM 221

Query: 256 DGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGRKMEETTSVSDSKHKN 315
           DG+PIGRK++LQ Y+SY +LS+ ++ELF   L AQ++   AE G +  E    S      
Sbjct: 222 DGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGT 281

Query: 316 GLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEM 360
           G+YTLVY DN+GDRML GD+PWK+FVSTVKRLRV++ S    +M
Sbjct: 282 GVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDM 320

[Close]

BLAST of Cmc04g0088821 vs. ExPASy Swiss-Prot
Match: Q9LG86 (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA2 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-31
Identity = 93/222 (41.89%), Postives = 123/222 (55.41%), Query Frame = 0


Query: 134 FQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNSNSVPAESSETKHH 193
           F RE +  +   +S     L +P      S   SKP  +E ++   + ++ +  +     
Sbjct: 7   FGREEEDAAAAGESGLELCLGLPAYFS--SSSSSKP--SEGSTAAPAFALRSNGTNASKP 66

Query: 194 DKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSRLSDCSNGQ--MFV 253
              A+ A  VGWPP+ SFR+N A   SS          +   +NG + S     +  MFV
Sbjct: 67  SGAAAAAPVVGWPPVRSFRRNLASSSSSSSKQAP-PPPSSSPQNGDKASKDGGAEKGMFV 126

Query: 254 KVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGRKMEETTSVSDS 313
           K+ MDGVPIGRK++L AY  Y QLSA +D+LF  LLAAQ    AA DG   E   + +  
Sbjct: 127 KINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQS---AAADG---EADAAAAGE 186

Query: 314 KHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSS 354
               G YTLVY D+EGDRMLVGDVPW+MF++T KRLRVLKSS
Sbjct: 187 MVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSS 217

[Close]

BLAST of Cmc04g0088821 vs. ExPASy TrEMBL
Match: A0A5D3E6G7 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005120 PE=3 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 8.3e-202
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP
Sbjct: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS 180
           FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS
Sbjct: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS 180

Query: 181 NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR 240
           NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR
Sbjct: 181 NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR 240

Query: 241 LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR 300
           LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR
Sbjct: 241 LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR 300

Query: 301 KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK 360
           KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK
Sbjct: 301 KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK 360

[Close]

BLAST of Cmc04g0088821 vs. ExPASy TrEMBL
Match: A0A1S3CRT9 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103503610 PE=3 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 8.3e-202
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP
Sbjct: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS 180
           FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS
Sbjct: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKPKATELNSCLNS 180

Query: 181 NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR 240
           NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR
Sbjct: 181 NSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSR 240

Query: 241 LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR 300
           LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR
Sbjct: 241 LSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGR 300

Query: 301 KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK 360
           KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK
Sbjct: 301 KMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEMK 360

[Close]

BLAST of Cmc04g0088821 vs. ExPASy TrEMBL
Match: A0A0A0LHU0 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G895090 PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.7e-186
Identity = 339/363 (93.39%), Postives = 345/363 (95.04%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG     EASSCLN NHENG
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG-----EASSCLNGNHENG 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           EISLSSA+PFSSC NIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIF+EKTAEKVSP
Sbjct: 61  EISLSSAKPFSSCFNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFHEKTAEKVSP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATELNSC 180
           FTPCLSASLPSSAF REAQKLSQPSQSSYLKH+LMPQNLDLVSEE SKP   KATELNSC
Sbjct: 121 FTPCLSASLPSSAFHREAQKLSQPSQSSYLKHVLMPQNLDLVSEESSKPCSLKATELNSC 180

Query: 181 LNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDEN 240
           LN  SVPAESSETKHHDKRASV+AAVGWPPI SFRKNFAVPRSSKPNSLE SKET+QDEN
Sbjct: 181 LNDGSVPAESSETKHHDKRASVSAAVGWPPIRSFRKNFAVPRSSKPNSLESSKETVQDEN 240

Query: 241 GSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE 300
           GS+LSDC NGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE
Sbjct: 241 GSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAE 300

Query: 301 DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFAT 360
           DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSV AT
Sbjct: 301 DGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVVAT 358

[Close]

BLAST of Cmc04g0088821 vs. ExPASy TrEMBL
Match: A0A6J1FE39 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443144 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.6e-149
Identity = 286/368 (77.72%), Postives = 306/368 (83.15%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           M R PELLDLIS DREW+L R GVGSSV ENNKLELRLGLPGE+ LAE S+CLN +HE+ 
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEDRLAEGSNCLNFSHESD 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           E  LSSA+ F SCLNIRSNKRAL                 DEF+PHKL+F EKTAEKV+P
Sbjct: 61  ESHLSSAKLFPSCLNIRSNKRALC----------------DEFRPHKLVFSEKTAEKVAP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATEL--- 180
              CL ASLPSSAFQREAQKLSQPSQS YL+HLLMPQ LDLVSEEPSK    K  E    
Sbjct: 121 LIHCLGASLPSSAFQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYS 180

Query: 181 --NSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKET 240
              SCLN+ SVPAESSE KHHDKRASVA+AVGWPPI SFRKNFA PRSSKPNSL LSKE 
Sbjct: 181 TGKSCLNNGSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEA 240

Query: 241 LQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300
           LQDENGS+LS CSNGQMFVKVCMDG+PIGRKLNLQAYN YDQLSAGIDELFH LLAAQRN
Sbjct: 241 LQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAAQRN 300

Query: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 360
           YLAAEDGRK+EETTS+SDSKH+NGLYTLVYYDNEGDRMLVGDVPW MFVSTVKRLRVL++
Sbjct: 301 YLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRN 352

[Close]

BLAST of Cmc04g0088821 vs. ExPASy TrEMBL
Match: A0A6J1CE85 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111009901 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.4e-148
Identity = 289/369 (78.32%), Postives = 306/369 (82.93%), Query Frame = 0


Query: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60
           MVRCPELLDLISRDREWDL RNG  SSV ENNKLELRLGLPGE GL E SSCLNSNHE+G
Sbjct: 1   MVRCPELLDLISRDREWDLIRNGAESSVSENNKLELRLGLPGEGGLVEGSSCLNSNHESG 60

Query: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120
           E+ LSSA  F SCLNIRSNKRALY K EG+A  G  L+RNDEFQPHKLIF EKTAEKVSP
Sbjct: 61  ELPLSSAELFPSCLNIRSNKRALYEKAEGMAEGGIWLNRNDEFQPHKLIFSEKTAEKVSP 120

Query: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATEL--- 180
            TPC SASL SSAFQREAQKLS  S+SSYL+HLLMPQ LD VSEE SK    K  E    
Sbjct: 121 PTPCPSASLSSSAFQREAQKLSLQSKSSYLQHLLMPQKLDKVSEEASKSGCLKTAEFPYL 180

Query: 181 --NSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKET 240
              S  N+ SVPA SSE +H DKR SVA AVGWPPI SFR N A PRSSKPNSL LSKET
Sbjct: 181 DGKSYPNTVSVPANSSEPQHSDKRTSVAPAVGWPPIRSFRMNLAAPRSSKPNSLGLSKET 240

Query: 241 LQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300
           +Q++NGS+ SDC NGQMFVKVCMDGVPIGRKLNLQAY+SY++LSAGIDELFH LLA+QRN
Sbjct: 241 VQEDNGSK-SDCCNGQMFVKVCMDGVPIGRKLNLQAYDSYEKLSAGIDELFHYLLASQRN 300

Query: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 360
           YL AEDGRKMEETTS SDSKH+N LYTLVYYDNEGDRMLVGDVPW MFVSTVKRL VLKS
Sbjct: 301 YLVAEDGRKMEETTSFSDSKHENRLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLHVLKS 360

[Close]

BLAST of Cmc04g0088821 vs. TAIR 10
Match: AT3G16500.1 (phytochrome-associated protein 1 )

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-35
Identity = 98/230 (42.61%), Postives = 130/230 (56.52%), Query Frame = 0


Query: 146 QSSYLKHLLMPQNLDLVSEEPSKPKATELNS-----------CLNSNSV-PAESSETKHH 205
           Q   L+  L P   D       K K TE+ +           C N N   P+  + +  H
Sbjct: 34  QEKKLELRLGPPGGDEEDHSAIKKKNTEIRNIKKETEDKSFHCFNGNHFSPSNKTTSVPH 93

Query: 206 --DKRASVAAAVGWPPIPSFRKNFAVPRSSK-PNSLELSKETLQDENGSRLSDCSNGQMF 265
              KR +    VGWPP+ SFRKN A   SSK  N      +  + ++G +  +     MF
Sbjct: 94  ISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMF 153

Query: 266 VKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGRKMEE-TTSVS 325
           VK+ MDGVPIGRK++L AYNSY+QLS  +D+LF  LLAAQR+     DG+  E+    + 
Sbjct: 154 VKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD---ISDGQGEEKPIIGLL 213

Query: 326 DSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSSVFATEM 360
           D K   G +TL Y DNEGD+MLVGDVPW+MFVS+VKRLRV+KSS  ++ +
Sbjct: 214 DGK---GEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSAL 257

[Close]

BLAST of Cmc04g0088821 vs. TAIR 10
Match: AT1G51950.1 (indole-3-acetic acid inducible 18 )

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-35
Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 0


Query: 161 LVSEEPSKPKATELNSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRS 220
           ++     +PK   + S       P+ +  T H  KR +    VGWPP+ SFRKN A   S
Sbjct: 58  MIRHMKKEPKDKSILSLAGKYFSPSSTKTTSH--KRTAPGPVVGWPPVRSFRKNLASGSS 117

Query: 221 SK--PNSLELSKETLQDENGSRLSDCS----NGQMFVKVCMDGVPIGRKLNLQAYNSYDQ 280
           SK   +S   +  TL+++     +  +     G MFVK+ M GVPIGRK++L A+NSY+Q
Sbjct: 118 SKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQ 177

Query: 281 LSAGIDELFHSLLAAQRNYLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGD 340
           LS  +D+LF  LLAAQR++ ++     +E+   ++     NG YTL Y DNEGD+MLVGD
Sbjct: 178 LSFTVDKLFRGLLAAQRDFPSS-----IEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGD 237

Query: 341 VPWKMFVSTVKRLRVLKSSVFATEM 360
           VPW+MFVS+VKRLRV+K+S  ++ +
Sbjct: 238 VPWQMFVSSVKRLRVIKTSEISSAL 255

[Close]

BLAST of Cmc04g0088821 vs. TAIR 10
Match: AT5G25890.1 (indole-3-acetic acid inducible 28 )

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-27
Identity = 74/180 (41.11%), Postives = 98/180 (54.44%), Query Frame = 0


Query: 175 NSCLNSNSVPAESSETKH-HDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETL 234
           N+ +N +   + + ET    + R  VA  VGWPP+ S R+N                  L
Sbjct: 21  NNNINGSKQKSSTKETSFLSNNRVEVAPVVGWPPVRSSRRNLTA--------------QL 80

Query: 235 QDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNY 294
           ++E   + SD    +++VK+ M+GVPIGRK+NL AYN+Y QLS  +D+LF          
Sbjct: 81  KEEMKKKESD-EEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF---------- 140

Query: 295 LAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSS 354
                        S  DS   N  YTLVY D EGD++LVGDVPW+MFVSTVKRL VLK+S
Sbjct: 141 -------------SKKDSWDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTS 162

[Close]

BLAST of Cmc04g0088821 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 103.2 bits (256), Expect = 4.4e-22
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 197 ASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSRL-SDCSNGQMFVKVCM 256
           A+    VGWPPI ++R N  V ++    + + + E  Q  N +R  S      MFVKV M
Sbjct: 84  ATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTM 143

Query: 257 DGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGRKMEETTSVSDSKHKN 316
           DG+PIGRK++L A+  Y+ LS  ++E+F       R      DG        + D    +
Sbjct: 144 DGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT--LETDGHMETPVKILPDG--SS 203

Query: 317 GLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSS 354
           GL  L Y D EGD MLVGDVPW MF+ +V+RLR++K+S
Sbjct: 204 GL-VLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of Cmc04g0088821 vs. TAIR 10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 103.2 bits (256), Expect = 4.4e-22
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 197 ASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKETLQDENGSRL-SDCSNGQMFVKVCM 256
           A+    VGWPPI ++R N  V ++    + + + E  Q  N +R  S      MFVKV M
Sbjct: 84  ATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTM 143

Query: 257 DGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRNYLAAEDGRKMEETTSVSDSKHKN 316
           DG+PIGRK++L A+  Y+ LS  ++E+F       R      DG        + D    +
Sbjct: 144 DGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT--LETDGHMETPVKILPDG--SS 203

Query: 317 GLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKSS 354
           GL  L Y D EGD MLVGDVPW MF+ +V+RLR++K+S
Sbjct: 204 GL-VLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

The following BLAST results are available for this feature:

BLAST of Cmc04g0088821 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466078.1	1.7e-201	100.00	PREDICTED: auxin-responsive protein IAA18-like [Cucumis melo] >KAA0038627.1 auxi...	[more]
XP_004136228.1	3.5e-186	93.39	auxin-responsive protein IAA26 isoform X1 [Cucumis sativus] >KGN60312.1 hypothet...	[more]
XP_038896900.1	3.7e-180	90.36	auxin-responsive protein IAA6-like [Benincasa hispida]	[more]
XP_031738423.1	1.0e-158	82.92	auxin-responsive protein IAA26 isoform X2 [Cucumis sativus]	[more]
KAG7024609.1	2.0e-149	77.99	Auxin-responsive protein IAA18 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cmc04g0088821 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LQ74	9.9e-35	32.61	Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 P...	[more]
Q8LAL2	2.2e-34	42.61	Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=...	[more]
O24408	2.9e-34	42.44	Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=...	[more]
Q5W670	2.4e-33	45.12	Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18...	[more]
Q9LG86	1.0e-31	41.89	Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA2 P...	[more]

BLAST of Cmc04g0088821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E6G7	8.3e-202	100.00	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRT9	8.3e-202	100.00	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103503610 PE=3 SV=1	[more]
A0A0A0LHU0	1.7e-186	93.39	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G895090 PE=3 SV=1	[more]
A0A6J1FE39	1.6e-149	77.72	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443144 PE=3 SV=1	[more]
A0A6J1CE85	1.4e-148	78.32	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111009901 PE=3 SV=...	[more]

BLAST of Cmc04g0088821 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16500.1	1.6e-35	42.61	phytochrome-associated protein 1	[more]
AT1G51950.1	2.0e-35	42.44	indole-3-acetic acid inducible 18	[more]
AT5G25890.1	1.2e-27	41.11	indole-3-acetic acid inducible 28	[more]
AT4G28640.1	4.4e-22	39.87	indole-3-acetic acid inducible 11	[more]
AT4G28640.2	4.4e-22	39.87	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 34..353 e-value: 6.8E-57 score: 193.1
None	No IPR available	GENE3D	3.10.20.90		coord: 243..359 e-value: 5.1E-34 score: 118.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..186
None	No IPR available	PANTHER	PTHR31734:SF191	AUXIN-RESPONSIVE PROTEIN	coord: 7..359
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 240..351
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 7..359
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 248..357 score: 22.472439

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0088821.1	Cmc04g0088821.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding