Cmc04g0088681 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0088681
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein Tat like
LocationCMiso1.1chr04: 1207844 .. 1208617 (+)
RNA-Seq ExpressionCmc04g0088681
SyntenyCmc04g0088681
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCGTCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCTCTGTTTTCAGTATTTGTGAGTGACTTGTATGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTATGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGCGTACAAAATCTCTTCTCCGACAGCAAAATCTAATATTGAAAAACATAAGGCAACAACAGATGAAGGTAAAAGAAAAATGGAGGTTTGAGTTTGGCATGCTTGAGGAGCTATGAATGTTGTTCACCCTTACTTTTCAGAAAACTCTCTTCTCAGTAATAATGATCCTCGTGCTTCACCTGATTCTCTGCCTTCTGTTGCCATCATCGTCTTTTTCCTTTCTCAAATTATGGAGCTAACAACAACAAACATGGTGCCATTACATCAATTTCAACTTCTGTTCTTTTGTTGTACATCCAATTATTTTGTTAGGATAGGGAAAATAAAGGGCCAATTTTTATTTTTTATTTTTTAAAAAAATTCTTGTACCTAATTAAATGTTACCTTTTTTCTTATATATATATATATTTGTGGCCAGATAAAAATGTATATAATTTCTTTGAACTCAATAAAGGTAGGCATGAGGATCAATCTTCATCTTAAGAGATTGGGTGCCTACTGCCTTTATATATTG

mRNA sequence

GATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCGTCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCTCTGTTTTCAGTATTTGTGAGTGACTTGTATGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTATGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGCGTACAAAATCTCTTCTCCGACAGCAAAATCTAATATTGAAAAACATAAGGCAACAACAGATGAAGGTAAAAGAAAAATGGAGGTTTGAGTTTGGCATGCTTGAGGAGCTATGAATGTTGTTCACCCTTACTTTTCAGAAAACTCTCTTCTCAGTAATAATGATCCTCGTGCTTCACCTGATTCTCTGCCTTCTGTTGCCATCATCGTCTTTTTCCTTTCTCAAATTATGGAGCTAACAACAACAAACATGGTGCCATTACATCAATTTCAACTTCTGTTCTTTTGTTGTACATCCAATTATTTTGTTAGGATAGGGAAAATAAAGGGCCAATTTTTATTTTTTATTTTTTAAAAAAATTCTTGTACCTAATTAAATGTTACCTTTTTTCTTATATATATATATATTTGTGGCCAGATAAAAATGTATATAATTTCTTTGAACTCAATAAAGGTAGGCATGAGGATCAATCTTCATCTTAAGAGATTGGGTGCCTACTGCCTTTATATATTG

Coding sequence (CDS)

ATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCGTCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCTCTGTTTTCAGTATTTGTGAGTGACTTGTATGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTATGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGCGTACAAAATCTCTTCTCCGACAGCAAAATCTAATATTGAAAAACATAAGGCAACAACAGATGAAGGTAAAAGAAAAATGGAGGTTTGAGTTTGGCATGCTTGAGGAGCTATGA

Protein sequence

MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYYEDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGMLEEL
Homology
BLAST of Cmc04g0088681 vs. NCBI nr
Match: KAA0038615.1 (hypothetical protein E6C27_scaffold92G001450 [Cucumis melo var. makuwa] >TYK31214.1 hypothetical protein E5676_scaffold455G005000 [Cucumis melo var. makuwa])

HSP 1 Score: 215.7 bits (548), Expect = 2.3e-52
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0

Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM
Sbjct: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

BLAST of Cmc04g0088681 vs. NCBI nr
Match: KGN60326.1 (hypothetical protein Csa_001171 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 4.9e-47
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0

Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLL+IFFLLIVLFLSSSLALFSVFVSDL+DAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           EDVKAEIELGLSLI+FGVMGFGVDVVL TKSLLRQQNL LKNIRQQQMK KE WR  FGM
Sbjct: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

BLAST of Cmc04g0088681 vs. NCBI nr
Match: KAG6591737.1 (putative beta-1,4-xylosyltransferase IRX9H, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131.3 bits (329), Expect = 5.6e-27
Identity = 82/120 (68.33%), Postives = 96/120 (80.00%), Query Frame = 0

Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVP+LDL+ALACLYG FIAL LLL+I  LL+V FLS++LALFSVFV DLYDAYSV+  YY
Sbjct: 525 MVPSLDLIALACLYGCFIALTLLLLISSLLVVFFLSATLALFSVFVGDLYDAYSVLCPYY 584

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           E++KAE ELG+ L+M+GVMGFGVDVVL  KSL RQQNL    +R  QMK KEK    FG+
Sbjct: 585 EELKAETELGVCLMMYGVMGFGVDVVLGIKSLFRQQNLRF-TVRLPQMKGKEKRWLGFGL 643

BLAST of Cmc04g0088681 vs. NCBI nr
Match: KAG7024618.1 (hypothetical protein SDJN02_13436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.3 bits (329), Expect = 5.6e-27
Identity = 82/120 (68.33%), Postives = 96/120 (80.00%), Query Frame = 0

Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVP+LDL+ALACLYG FIAL LLL+I  LL+V FLS++LALFSVFV DLYDAYSV+  YY
Sbjct: 136 MVPSLDLIALACLYGCFIALTLLLLISSLLVVFFLSATLALFSVFVGDLYDAYSVLCPYY 195

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           E++KAE ELG+ L+M+GVMGFGVDVVL  KSL RQQNL    +R  QMK KEK    FG+
Sbjct: 196 EELKAETELGVCLMMYGVMGFGVDVVLGIKSLFRQQNLRF-TVRLPQMKGKEKRWLGFGL 254

BLAST of Cmc04g0088681 vs. NCBI nr
Match: KAB1204378.1 (hypothetical protein CJ030_MR8G014171 [Morella rubra])

HSP 1 Score: 72.0 bits (175), Expect = 4.0e-09
Identity = 50/108 (46.30%), Postives = 77/108 (71.30%), Query Frame = 0

Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           M+PNLDLL LA LYGSFIA +LL V+  +L+ L L+ S+ LFS+ V DL+  +SV SL+Y
Sbjct: 1   MIPNLDLLLLAFLYGSFIACVLLAVLSVILLSLCLAFSVTLFSIVVIDLHYVFSVCSLHY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQM 109
             +KA ++LG  LI++ +M + V +VL +K+ L Q+   + NIR++++
Sbjct: 61  ITLKANLQLGSVLILYIIMRYSVPMVLASKASLEQK---IYNIRKKRL 105

BLAST of Cmc04g0088681 vs. ExPASy TrEMBL
Match: A0A5A7TB69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005000 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0

Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM
Sbjct: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

BLAST of Cmc04g0088681 vs. ExPASy TrEMBL
Match: A0A0A0LJX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895720 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0

Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLL+IFFLLIVLFLSSSLALFSVFVSDL+DAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           EDVKAEIELGLSLI+FGVMGFGVDVVL TKSLLRQQNL LKNIRQQQMK KE WR  FGM
Sbjct: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

BLAST of Cmc04g0088681 vs. ExPASy TrEMBL
Match: A0A6A1UX23 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G014171 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-09
Identity = 50/108 (46.30%), Postives = 77/108 (71.30%), Query Frame = 0

Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           M+PNLDLL LA LYGSFIA +LL V+  +L+ L L+ S+ LFS+ V DL+  +SV SL+Y
Sbjct: 1   MIPNLDLLLLAFLYGSFIACVLLAVLSVILLSLCLAFSVTLFSIVVIDLHYVFSVCSLHY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQM 109
             +KA ++LG  LI++ +M + V +VL +K+ L Q+   + NIR++++
Sbjct: 61  ITLKANLQLGSVLILYIIMRYSVPMVLASKASLEQK---IYNIRKKRL 105

BLAST of Cmc04g0088681 vs. ExPASy TrEMBL
Match: A0A2R6QZJ5 (Protein Tat like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12507 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-09
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 0

Query: 1  MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
          MVPNLDL+ LA L+GSFI+ ILLLVIF  LI L L+ S+ALFS+ + D Y  +S++SLY+
Sbjct: 1  MVPNLDLILLAFLHGSFISCILLLVIFLTLICLLLAFSIALFSIVLIDSYHIFSLVSLYF 60

Query: 61 EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLL 94
            ++A +E+G ++ +F +M F V+  L +K L+
Sbjct: 61 GTLRANVEMGFAIGVFTLMHFMVNAALDSKPLV 93

BLAST of Cmc04g0088681 vs. ExPASy TrEMBL
Match: A0A4S4DYY3 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013584 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.7e-09
Identity = 42/90 (46.67%), Postives = 65/90 (72.22%), Query Frame = 0

Query: 1  MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
          MVPNLDL+ +A L+GSFI+ ILL+  F +LI L L+ S+ LFS+ + D YD +S++SLY+
Sbjct: 1  MVPNLDLILIAVLHGSFISCILLVFTFLMLICLLLAFSITLFSIVIIDSYDVFSMISLYF 60

Query: 61 EDVKAEIELGLSLIMFGVMGFGVDVVLRTK 91
            ++A +ELG  L++F ++ F V+  L +K
Sbjct: 61 GTLRANVELGFVLVLFTLLHFMVNAGLASK 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0038615.12.3e-52100.00hypothetical protein E6C27_scaffold92G001450 [Cucumis melo var. makuwa] >TYK3121... [more]
KGN60326.14.9e-4792.74hypothetical protein Csa_001171 [Cucumis sativus][more]
KAG6591737.15.6e-2768.33putative beta-1,4-xylosyltransferase IRX9H, partial [Cucurbita argyrosperma subs... [more]
KAG7024618.15.6e-2768.33hypothetical protein SDJN02_13436, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAB1204378.14.0e-0946.30hypothetical protein CJ030_MR8G014171 [Morella rubra][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TB691.1e-52100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LJX12.4e-4792.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895720 PE=4 SV=1[more]
A0A6A1UX232.0e-0946.30Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G014171 PE=4 SV=1[more]
A0A2R6QZJ53.3e-0949.46Protein Tat like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12... [more]
A0A4S4DYY39.7e-0946.67Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0135... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0088681.1Cmc04g0088681.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane