Cmc03g0085041 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0085041
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	GATA type zinc finger transcription factor family protein
Location	CMiso1.1chr03: 28969998 .. 28971395 (+)
RNA-Seq Expression	Cmc03g0085041
Synteny	Cmc03g0085041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTTGCTTCCCCACTGACATTAATCATCTATATATCCTCTGCTTCATCTCTCCATTCTTCTAAATTAAAGCTCACTTCTTCCATTGAAGCCTCCACAGACAAGAATAGATCTTCGTTCTTGTAGTGAACAACACTCCAAAACCATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTTGTCGACAAGCTGACCGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCACCATTGCAAAGGCACTCTGAAGGTGAAACCAATGGTTCCACCCCCCTTATTTTTTTGTTTGTGACTGATGAGGGAAATGGAACTTTGAAACTGATGTCGTTGATCTGTTTTCAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTATTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGACAAAAGCTTTGAAGGTACAAATTATAAGTTCTGTTGGATGGATGGATCTGATTTCTCAGATTTTTCATTTTCGGTTTCTGTTGATAACTGAATCATTTTGGTTTTTTCTTTTTTCTTGTTTTCTATTTTGTGTGTGTTTTTAGGAACGCCAAAGATCGTAAAGCCAGAGAAACCGATTGATAGCGAGGTAATTCCCTGTTTGCTTGTACTTGAGCCTGTTACAGCTGATGTAATTCTTCTAATTCTACCATTGATCTTGAAAATACATCAACAGAAACCGACAGCAAACAAGGTTGCTAGCATGTTTGGAGGAACCAGAGATAAGTGTCTTGGCTGTGACAACACTGTTTATCCAACAGAAAAGGTAACAACAATATACAAAAGTTTTCTTTTCTGCTTCCTGCATTTCATTTTATTAACTGAACGAGAAAATCCAACCTCTGTAAATGGTCTACGTTTCAAGGTTACTGTGAACGGAATTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCGAACTATATTGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTAATCAAAGAGAAAGGAAACTTGAGTCAACTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGATTTTTCAGAATCAAGCTTTATCAGAATCAAAGGCTGTACACTAAGAGAAGTACTGGCATCCATTGCGTTTCGTGTTAAAAGTGTGTTTTTGGCCTGTCTGTTTCCCAAATATTCAAATAACATGCTCAAACAGATGCCAAGATCTGTTTGATTTTCACCATCTTTCGTCTTAAAAGAAGTGTGGCATGTTTGTAGATTTGAATCATATTCCTATCAATTCCAATGGATACTTATTATTATAAGTACATT

mRNA sequence

TTGTTTGCTTCCCCACTGACATTAATCATCTATATATCCTCTGCTTCATCTCTCCATTCTTCTAAATTAAAGCTCACTTCTTCCATTGAAGCCTCCACAGACAAGAATAGATCTTCGTTCTTGTAGTGAACAACACTCCAAAACCATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTTGTCGACAAGCTGACCGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCACCATTGCAAAGGCACTCTGAAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTATTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGACAAAAGCTTTGAAGGAACGCCAAAGATCGTAAAGCCAGAGAAACCGATTGATAGCGAGAAACCGACAGCAAACAAGGTTGCTAGCATGTTTGGAGGAACCAGAGATAAGTGTCTTGGCTGTGACAACACTGTTTATCCAACAGAAAAGGTTACTGTGAACGGAATTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCGAACTATATTGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTAATCAAAGAGAAAGGAAACTTGAGTCAACTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGATTTTTCAGAATCAAGCTTTATCAGAATCAAAGGCTGTACACTAAGAGAAGTACTGGCATCCATTGCGTTTCGTGTTAAAAGTGTGTTTTTGGCCTGTCTGTTTCCCAAATATTCAAATAACATGCTCAAACAGATGCCAAGATCTGTTTGATTTTCACCATCTTTCGTCTTAAAAGAAGTGTGGCATGTTTGTAGATTTGAATCATATTCCTATCAATTCCAATGGATACTTATTATTATAAGTACATT

Coding sequence (CDS)

ATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTTGTCGACAAGCTGACCGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCACCATTGCAAAGGCACTCTGAAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTATTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGACAAAAGCTTTGAAGGAACGCCAAAGATCGTAAAGCCAGAGAAACCGATTGATAGCGAGAAACCGACAGCAAACAAGGTTGCTAGCATGTTTGGAGGAACCAGAGATAAGTGTCTTGGCTGTGACAACACTGTTTATCCAACAGAAAAGGTTACTGTGAACGGAATTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCGAACTATATTGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTAATCAAAGAGAAAGGAAACTTGAGTCAACTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGA

Protein sequence

MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA

Homology

[Close]

BLAST of Cmc03g0085041 vs. NCBI nr
Match: XP_008444540.1 (PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo])

HSP 1 Score: 427.2 bits (1097), Expect = 7.9e-116
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGEVVASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of Cmc03g0085041 vs. NCBI nr
Match: XP_004142897.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >XP_031737336.1 LIM domain-containing protein WLIM1 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 3.3e-114
Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE+PTANKVAS FGGTRDKCLGCDNTVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGEVVASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of Cmc03g0085041 vs. NCBI nr
Match: XP_038886389.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 417.5 bits (1072), Expect = 6.2e-113
Identity = 192/198 (96.97%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPID EKPTANKVAS FGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGEKPTANKVASKFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGE+VASEA
Sbjct: 181 KITAKEKINGGEMVASEA 198

[Close]

BLAST of Cmc03g0085041 vs. NCBI nr
Match: XP_022131363.1 (LIM domain-containing protein WLIM1-like [Momordica charantia])

HSP 1 Score: 413.3 bits (1061), Expect = 1.2e-111
Identity = 192/198 (96.97%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPID EKPTANKVASMFGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGEKPTANKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITA+EKINGGE VASEA
Sbjct: 181 KITAREKINGGE-VASEA 197

[Close]

BLAST of Cmc03g0085041 vs. NCBI nr
Match: XP_022962514.1 (LIM domain-containing protein WLIM1-like [Cucurbita moschata] >XP_022997596.1 LIM domain-containing protein WLIM1-like [Cucurbita maxima] >XP_023545896.1 LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.9 bits (1047), Expect = 4.9e-110
Identity = 189/198 (95.45%), Postives = 193/198 (97.47%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKP+DSEKPTA KVASMFGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDSEKPTAKKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KI +KEKIN GE VASEA
Sbjct: 181 KIPSKEKIN-GEAVASEA 197

[Close]

BLAST of Cmc03g0085041 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 8.0e-95
Identity = 156/188 (82.98%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQ FKRTGSL+KSFEGTPKI KP++P++ E+P   KV++MFGGTR+KC+GCD TVYP 
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKV+VNG  YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHHIQLIKEKGNLSQLEG  E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 181 KITAKEKI 189
              AK+K+
Sbjct: 181 N-AAKDKV 187

[Close]

BLAST of Cmc03g0085041 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-77
Identity = 127/175 (72.57%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 2   AFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61
           +F GTTQKC  CEKTVYLVDKL A+ R+YHKACFRCHHC  TLKLSN+NSF+GV+YCR H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 62  FDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPTE 121
           FDQ+FKRTGSL+KSF+GTPK  KPE+    E  +AN+++S F GTRDKC  C   VYP E
Sbjct: 63  FDQLFKRTGSLEKSFDGTPKF-KPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIE 122

Query: 122 KVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLE 177
           +V V+G  YH++CFKCCHGGCTISPSNYIAHEGRLYCKHHHIQL K+KGN SQLE
Sbjct: 123 RVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLE 176

[Close]

BLAST of Cmc03g0085041 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.4e-60
Identity = 106/175 (60.57%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHKACF+C HCK  L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HF+Q+FK +GS  K+F+   K +  +KP      T +++A MF GT+DKC  C  TVYP 
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPL-TDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of Cmc03g0085041 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.0e-57
Identity = 104/179 (58.10%), Postives = 125/179 (69.83%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKP----TANKVASMFGGTRDKCLGCDNT 120
           HF+Q+FK +GS +K+F+       P K  D   P    T ++VA  F GT++KC  C  T
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           VYP EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of Cmc03g0085041 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.4e-53
Identity = 92/175 (52.57%), Postives = 122/175 (69.71%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT  KC AC+KTVY++D LT +   YHK+CFRC HCKGTL +SNY+S +GVLYC+P
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HF+Q+FK +G+  K+F+      K EKP D    T +K++S F GT+DKC  C  TVYP 
Sbjct: 61  HFEQLFKESGNYSKNFQAG----KTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPL 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           EKVT+ G  YHK+CF+C H GC ++ S+Y +  G LYCK H  QL  EKG+ + +
Sbjct: 121 EKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]

BLAST of Cmc03g0085041 vs. ExPASy TrEMBL
Match: A0A1S3BBD7 (LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 3.8e-116
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGEVVASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of Cmc03g0085041 vs. ExPASy TrEMBL
Match: A0A0A0LNS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354680 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.6e-114
Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE+PTANKVAS FGGTRDKCLGCDNTVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGEVVASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of Cmc03g0085041 vs. ExPASy TrEMBL
Match: A0A6J1BT53 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111004606 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 5.7e-112
Identity = 192/198 (96.97%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPID EKPTANKVASMFGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGEKPTANKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITA+EKINGGE VASEA
Sbjct: 181 KITAREKINGGE-VASEA 197

[Close]

BLAST of Cmc03g0085041 vs. ExPASy TrEMBL
Match: A0A6J1K7W9 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111492481 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 189/198 (95.45%), Postives = 193/198 (97.47%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKP+DSEKPTA KVASMFGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDSEKPTAKKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KI +KEKIN GE VASEA
Sbjct: 181 KIPSKEKIN-GEAVASEA 197

[Close]

BLAST of Cmc03g0085041 vs. ExPASy TrEMBL
Match: A0A6J1HHA7 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111462919 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 189/198 (95.45%), Postives = 193/198 (97.47%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKP+DSEKPTA KVASMFGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDSEKPTAKKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KI +KEKIN GE VASEA
Sbjct: 181 KIPSKEKIN-GEAVASEA 197

[Close]

BLAST of Cmc03g0085041 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 347.8 bits (891), Expect = 5.7e-96
Identity = 156/188 (82.98%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HFDQ FKRTGSL+KSFEGTPKI KP++P++ E+P   KV++MFGGTR+KC+GCD TVYP 
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKV+VNG  YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHHIQLIKEKGNLSQLEG  E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 181 KITAKEKI 189
              AK+K+
Sbjct: 181 N-AAKDKV 187

[Close]

BLAST of Cmc03g0085041 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 231.9 bits (590), Expect = 4.5e-61
Identity = 106/175 (60.57%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHKACF+C HCK  L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120
           HF+Q+FK +GS  K+F+   K +  +KP      T +++A MF GT+DKC  C  TVYP 
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPL-TDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of Cmc03g0085041 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 224.6 bits (571), Expect = 7.2e-59
Identity = 104/179 (58.10%), Postives = 125/179 (69.83%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKP----TANKVASMFGGTRDKCLGCDNT 120
           HF+Q+FK +GS +K+F+       P K  D   P    T ++VA  F GT++KC  C  T
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           VYP EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of Cmc03g0085041 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 224.6 bits (571), Expect = 7.2e-59
Identity = 104/179 (58.10%), Postives = 125/179 (69.83%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKP----TANKVASMFGGTRDKCLGCDNT 120
           HF+Q+FK +GS +K+F+       P K  D   P    T ++VA  F GT++KC  C  T
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           VYP EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of Cmc03g0085041 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 224.6 bits (571), Expect = 7.2e-59
Identity = 104/179 (58.10%), Postives = 125/179 (69.83%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKP----TANKVASMFGGTRDKCLGCDNT 120
           HF+Q+FK +GS +K+F+       P K  D   P    T ++VA  F GT++KC  C  T
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           VYP EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

The following BLAST results are available for this feature:

BLAST of Cmc03g0085041 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444540.1	7.9e-116	100.00	PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo]	[more]
XP_004142897.1	3.3e-114	98.48	LIM domain-containing protein WLIM1 [Cucumis sativus] >XP_031737336.1 LIM domain...	[more]
XP_038886389.1	6.2e-113	96.97	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]
XP_022131363.1	1.2e-111	96.97	LIM domain-containing protein WLIM1-like [Momordica charantia]	[more]
XP_022962514.1	4.9e-110	95.45	LIM domain-containing protein WLIM1-like [Cucurbita moschata] >XP_022997596.1 LI...	[more]

BLAST of Cmc03g0085041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	8.0e-95	82.98	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	1.2e-77	72.57	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	6.4e-60	60.57	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	1.0e-57	58.10	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O80839	3.4e-53	52.57	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of Cmc03g0085041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBD7	3.8e-116	100.00	LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4...	[more]
A0A0A0LNS7	1.6e-114	98.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354680 PE=4 SV=1	[more]
A0A6J1BT53	5.7e-112	96.97	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1K7W9	2.4e-110	95.45	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1HHA7	2.4e-110	95.45	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Cmc03g0085041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	5.7e-96	82.98	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	4.5e-61	60.57	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	7.2e-59	58.10	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	7.2e-59	58.10	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	7.2e-59	58.10	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 5.2E-10 score: 49.3 coord: 109..161 e-value: 2.7E-11 score: 53.5
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 110..164 e-value: 3.8E-11 score: 43.0 coord: 10..63 e-value: 1.3E-9 score: 38.1
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 108..168 score: 12.1474
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.0285
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 105..174 e-value: 1.9E-17 score: 65.2 coord: 4..74 e-value: 4.6E-19 score: 70.4
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..185
None	No IPR available	PANTHER	PTHR24206:SF77	LIM DOMAIN-CONTAINING PROTEIN WLIM1-LIKE	coord: 1..185
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 3.23216E-40 score: 129.507
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 110..170 e-value: 4.64756E-37 score: 121.423
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 102..135
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 136..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0085041.1	Cmc03g0085041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding