Cmc03g0083311 (gene) Melon (Charmono) v1.1

Overview
NameCmc03g0083311
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr03: 28116444 .. 28119625 (+)
RNA-Seq ExpressionCmc03g0083311
SyntenyCmc03g0083311
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTATATATTTTATGGTGAATATAAAGGGTGTAATTAATTTTTGACTAGTTTTAAGAAAAACAATCCCTTTACAACATTGTTATTGTTCAATAAACCCAAAATGATCTACTCTCACACCTCATTCGAATGTGTGTGTTTTCTCACTGCAATAAATATATGTATATATATAATGTGACGAATGGGTTTTAAACCTATGTTATCCATGATGAAATTTAAACCTAAAATCTAATATGTAAATATAGATGACATAATGTTATTCCTTCCATGGAGTGCACTACAACCTTAAAGTTTTACGTACCCGCATCTAAAATAAATTTTCGGTACAACTCTTCCTAGGCCCCAATGTTTTTCTTTCCAAGAAAAAAAAAATCATAATAATACATACTCTATATCATCCATAACATCAAAGGCGCTTTATTGTTATTTCGTTCAAGTCAAAAAGACAAGATTTTGTTCAATGTTTTTGAAAAACAAAAAAGAATACATGCATTTTCTATTATCGACATTCATGTCTCTTTCGATATCTATTCTAATTATAGATGTATTTCAAGATGAATACTTTTTAATTAAAAAAAGCTAAATTAACATGTCACATCATCATTTTCGAAAGCTTGATTAGTAATAGTAAGAAAAAAAGTTAAAAGAATAACAAATATGAGTACTTAGGTCCTCTAGCTAGTTAATTATGAAAATTACTAAATAGAAGCATATTTGAGGACTAAACTAAAGATAGGATAAGAAACAATTATTTGATGCATAAACTAAATTGGCAAATTTTATTTTAAGAAACTGTTCTTAGAACAATCCTTGCTTCATGTGTTTTCTTTCCTTTTTTTCTCTAAGTTAAAAATGGTCCATATATATCCACAAATAATTTACTTAAATTTAAATAATAAAAAAGGGGGGTTTTTTTTGTTTATAAATACAATTAAAACATGGAGAAATTATTTAAACATGAAGACTACAATAATGTGAGTGTCAGAGTTAAGAGCATTGGAGTTAAGAAAGGATATTAATTAATTTTAATTGAAAGATGAATGAGATTAAAATTGGTCCCATTGGTCAGAAATGATGAAAAGCTGTTGAGGAAAAAAATGATTAAAAAAAATAAATAAATAAAAACGATAAATAATTGAGGGATTAAAATTAATTAAGATGAAGAAGAATCACAAGAAGGTCTCTGACATAAAATCGTCTCTCAATATTCCTTCAATTATATAAACGACGTTATATTCCTCTAATTTAACGTACGTGATTCTTACCTTCTTCAGCAGGCATTGGCCGCCATGGATTCCAAGTTACGATTCATTCGTAATGCCGGCACCGGCGCCGGTACCGGTGAGTTGATCAGGTTCGTGATTTTCGTTCTGCTTCTTCACAGTGTTCTTGTTGTTATGCATCCAGACTTTGAGAACTTGCCGTTTCACTCCGACTTCCGTACAGAATCTTTCCACTTCTTCTTCATCTTGCTTCTGAATCCTCCATCCGACTTTCTCAGCGAACTCGAGCATCCGATCCTTTTGCTCCTGTGTGAACTTTGTACGGAAACGCTTTTTCGACAAGGAGAAGGAAGACGGCGGCATAACCTCCGCATTGGAGTGGAAAACGTTTAAATCCTCACTGGAAGACTCGTTTCCGCCACCGCCGGCGAAGGCGACGTTCATCGGAGCGATGATTGGAGCAGTAGGACTAGAATGGAGGTTCAATGCCATGGAGAATTTATGGTGACCGTGAAGAGCGGAAGGAGAAGGTAATGGCGGAGGAAGCTGGAGATGGTTCAACATTAAGCCTCTTCTGTAATTAGGACTGATATTCAATTGAGTCTCACCGTCAATTTCTTTCCGGTGAAAATTCCGGTGACATTCACAAGCAGCACATTTCAAAGCCTCTAGGGTTCCGTCTTCACCACTCGGCATAAACTCTCCACATCCGTCGTAAATATTCCCCCCAACGCTCGCCGCGTGATTCTTCAAACATTCACGATATCTAACTCCAGAAACACCCCCTCGCGCCTTGGATCTACCGCCAGAGGAAAAATTACCACCACCACCTCCACCTCCTCCTCCTCCGCCACCGCCGCCGCCAACATTCTCACCGGCATCGTGGTGGTCTGTTTGGATATGGTGATGAGAACCATTATGAATCCTGTCGGAAGAAGTTTCCCCAAAAATATGACCATAAGCACCGGCACCAGAATTAGCTCCAGGCATTATTACTTCCTTCTCTTGTTCTCTCATATCCATACGAGTAAATTCCAAAACCCTAAACCACAGAAACACACACACACACAGAGAAAAAAAATTGGATAAAGGAAAAAGAGAGCTCAGATCTCAAAGAAGGCAGAGGGGTTCAAATCGAAGAATCAATCAGGTACATACATGTAATTAAAATTGAAAATCGAATTAAATTAAACTGCTAGTGGTGCATGCTCAATTAAATTAATTTCCACTTTCCCACTTTCCCCCATGAAATTAGAAAAAACAAGGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGGGACCAAGCTAGCTAGGGTTTGGGCGCCATTAAAGAGAGAGTGAAGAAATGAAAGGAGATTAGGGTTTTAGAGAGAGAGAGAGATAGATAGATAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGTAGAGAGGGGAATGCTTCAAGGGATCCAACAGGCCAGCTACATATCCAACAAGAGACAGGTTGGTTGCTTATGGAGAAGCGAAGGGAAGGAGAAAGAAGAAAGAAGAGAGAGATGGGAAGGGTATTTTGGGGAAAAATAGGAAAAGGGGGGTAAAAATGGCACCCAAAGGGAAGGGCAATACACAAAAACAACCGACAACGTCATGTTCATCCCTCTCCCACGCCCTGCCATAAATGGGACCCATAACCCCTCCCTCCCTTGGCCCCTTCATTATTATTCATTGCTTTCTATTTTCTCTCTCTCTTTCTATCTCTAAGCACTTGACCATGGTCCATCACCAATGCTCTGTACTACTACTCATAACCATACCCCCTTTTGATGCGACCTTACTTCGCTTTCATATTCCCATTTCCCCCCCCTTAAACCCTAATCTTCTTTATTCCTTCCTTCATTTTACTTAATAACCATTCCCCCATCACTCCTTCCCTTCTCTCGAAGTTAGAGGTTCATTCCTCATACTATTCT

mRNA sequence

TTGTATATATTTTATGGTGAATATAAAGGGTGTAATTAATTTTTGACTAGTTTTAAGAAAAACAATCCCTTTACAACATTGTTATTGTTCAATAAACCCAAAATGATCTACTCTCACACCTCATTCGAATGTGTGTGTTTTCTCACTGCAATAAATATATGTATATATATAATGTGACGAATGGGTTTTAAACCTATGTTATCCATGATGAAATTTAAACCTAAAATCTAATATGTAAATATAGATGACATAATGTTATTCCTTCCATGGAGTGCACTACAACCTTAAAGTTTTACGTACCCGCATCTAAAATAAATTTTCGGTACAACTCTTCCTAGGCCCCAATGTTTTTCTTTCCAAGAAAAAAAAAATCATAATAATACATACTCTATATCATCCATAACATCAAAGGCGCTTTATTGTTATTTCGTTCAAGTCAAAAAGACAAGATTTTGTTCAATGTTTTTGAAAAACAAAAAAGAATACATGCATTTTCTATTATCGACATTCATGTCTCTTTCGATATCTATTCTAATTATAGATGTATTTCAAGATGAATACTTTTTAATTAAAAAAAGCTAAATTAACATGTCACATCATCATTTTCGAAAGCTTGATTAGTAATAGTAAGAAAAAAAGTTAAAAGAATAACAAATATGAGTACTTAGGTCCTCTAGCTAGTTAATTATGAAAATTACTAAATAGAAGCATATTTGAGGACTAAACTAAAGATAGGATAAGAAACAATTATTTGATGCATAAACTAAATTGGCAAATTTTATTTTAAGAAACTGTTCTTAGAACAATCCTTGCTTCATGTGTTTTCTTTCCTTTTTTTCTCTAAGTTAAAAATGGTCCATATATATCCACAAATAATTTACTTAAATTTAAATAATAAAAAAGGGGGGTTTTTTTTGTTTATAAATACAATTAAAACATGGAGAAATTATTTAAACATGAAGACTACAATAATGTGAGTGTCAGAGTTAAGAGCATTGGAGTTAAGAAAGGATATTAATTAATTTTAATTGAAAGATGAATGAGATTAAAATTGGTCCCATTGGTCAGAAATGATGAAAAGCTGTTGAGGAAAAAAATGATTAAAAAAAATAAATAAATAAAAACGATAAATAATTGAGGGATTAAAATTAATTAAGATGAAGAAGAATCACAAGAAGGTCTCTGACATAAAATCGTCTCTCAATATTCCTTCAATTATATAAACGACGTTATATTCCTCTAATTTAACGTACGTGATTCTTACCTTCTTCAGCAGGCATTGGCCGCCATGGATTCCAAGTTACGATTCATTCGTAATGCCGGCACCGGCGCCGGTACCGGTGAGTTGATCAGGTTCGTGATTTTCGTTCTGCTTCTTCACAGTGTTCTTGTTGTTATGCATCCAGACTTTGAGAACTTGCCGTTTCACTCCGACTTCCGTACAGAATCTTTCCACTTCTTCTTCATCTTGCTTCTGAATCCTCCATCCGACTTTCTCAGCGAACTCGAGCATCCGATCCTTTTGCTCCTGTGTGAACTTTGTACGGAAACGCTTTTTCGACAAGGAGAAGGAAGACGGCGGCATAACCTCCGCATTGGAGTGGAAAACGTTTAAATCCTCACTGGAAGACTCGTTTCCGCCACCGCCGGCGAAGGCGACGTTCATCGGAGCGATGATTGGAGCAGTAGGACTAGAATGGAGGTTCAATGCCATGGAGAATTTATGGTGACCGTGAAGAGCGGAAGGAGAAGGTAATGGCGGAGGAAGCTGGAGATGGTTCAACATTAAGCCTCTTCTGTAATTAGGACTGATATTCAATTGAGTCTCACCGTCAATTTCTTTCCGGTGAAAATTCCGGTGACATTCACAAGCAGCACATTTCAAAGCCTCTAGGGTTCCGTCTTCACCACTCGGCATAAACTCTCCACATCCGTCGTAAATATTCCCCCCAACGCTCGCCGCGTGATTCTTCAAACATTCACGATATCTAACTCCAGAAACACCCCCTCGCGCCTTGGATCTACCGCCAGAGGAAAAATTACCACCACCACCTCCACCTCCTCCTCCTCCGCCACCGCCGCCGCCAACATTCTCACCGGCATCGTGGTGGTCTGTTTGGATATGGTGATGAGAACCATTATGAATCCTGTCGGAAGAAGTTTCCCCAAAAATATGACCATAAGCACCGGCACCAGAATTAGCTCCAGGCATTATTACTTCCTTCTCTTGTTCTCTCATATCCATACGAGTAAATTCCAAAACCCTAAACCACAGAAACACACACACACACAGAGAAAAAAAATTGGATAAAGGAAAAAGAGAGCTCAGATCTCAAAGAAGGCAGAGGGGTTCAAATCGAAGAATCAATCAGGTACATACATGTAATTAAAATTGAAAATCGAATTAAATTAAACTGCTAGTGGTGCATGCTCAATTAAATTAATTTCCACTTTCCCACTTTCCCCCATGAAATTAGAAAAAACAAGGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGGGACCAAGCTAGCTAGGGTTTGGGCGCCATTAAAGAGAGAGTGAAGAAATGAAAGGAGATTAGGGTTTTAGAGAGAGAGAGAGATAGATAGATAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGTAGAGAGGGGAATGCTTCAAGGGATCCAACAGGCCAGCTACATATCCAACAAGAGACAGGTTGGTTGCTTATGGAGAAGCGAAGGGAAGGAGAAAGAAGAAAGAAGAGAGAGATGGGAAGGGTATTTTGGGGAAAAATAGGAAAAGGGGGGTAAAAATGGCACCCAAAGGGAAGGGCAATACACAAAAACAACCGACAACGTCATGTTCATCCCTCTCCCACGCCCTGCCATAAATGGGACCCATAACCCCTCCCTCCCTTGGCCCCTTCATTATTATTCATTGCTTTCTATTTTCTCTCTCTCTTTCTATCTCTAAGCACTTGACCATGGTCCATCACCAATGCTCTGTACTACTACTCATAACCATACCCCCTTTTGATGCGACCTTACTTCGCTTTCATATTCCCATTTCCCCCCCCTTAAACCCTAATCTTCTTTATTCCTTCCTTCATTTTACTTAATAACCATTCCCCCATCACTCCTTCCCTTCTCTCGAAGTTAGAGGTTCATTCCTCATACTATTCT

Coding sequence (CDS)

ATGGATTCCAAGTTACGATTCATTCGTAATGCCGGCACCGGCGCCGGTACCGGTGAGTTGATCAGGTTCGTGATTTTCGTTCTGCTTCTTCACAGTGTTCTTGTTGTTATGCATCCAGACTTTGAGAACTTGCCGTTTCACTCCGACTTCCGTACAGAATCTTTCCACTTCTTCTTCATCTTGCTTCTGAATCCTCCATCCGACTTTCTCAGCGAACTCGAGCATCCGATCCTTTTGCTCCTGTGTGAACTTTGTACGGAAACGCTTTTTCGACAAGGAGAAGGAAGACGGCGGCATAACCTCCGCATTGGAGTGGAAAACGTTTAA

Protein sequence

MDSKLRFIRNAGTGAGTGELIRFVIFVLLLHSVLVVMHPDFENLPFHSDFRTESFHFFFILLLNPPSDFLSELEHPILLLLCELCTETLFRQGEGRRRHNLRIGVENV
Homology
[Close]
BLAST of Cmc03g0083311 vs. NCBI nr
Match: PON84777.1 (hypothetical protein TorRG33x02_194810 [Trema orientale])

HSP 1 Score: 54.3 bits (129), Expect = 7.6e-04
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 29 LLHSVLVVMHPDFENLPFHSDFRTESFHFFFILLLNPPSDFLSELEHPILLLLCELCTET 88
          L  SVLVVMHP+ E++       TE    F ILLLNPPS  L + +HP+LLLL +L  + 
Sbjct: 9  LTKSVLVVMHPNLEHVTLDPSLVTELLDQFLILLLNPPSQPLRQPQHPLLLLLAKLGPKP 68

Query: 89 LFRQGEG 96
          L  +  G
Sbjct: 69 LLIRRPG 75

[Close]
BLAST of Cmc03g0083311 vs. NCBI nr
Match: PON34552.1 (LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_343380 [Parasponia andersonii])

HSP 1 Score: 54.3 bits (129), Expect = 7.6e-04
Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 0 

Query: 24  VIFV-LLLHSVLVVMHPDFENLPFHSDFRTESFHFFFILLLNPPSDFLSELEHPILLLLC 83
           +IF+  L  SVLVVMHP+ E++       TE    F ILLLNPPS  L + +HP+LLLL 
Sbjct: 3   IIFLGFLTKSVLVVMHPNLEHVTLDPSLVTELLDQFIILLLNPPSQPLRQPQHPLLLLLA 62

Query: 84  ELCTETLFRQGEGRRRH 100
           +L  + L  +    R H
Sbjct: 63  KLGPKPLLIRRTRIRTH 79

[Close]
BLAST of Cmc03g0083311 vs. ExPASy TrEMBL
Match: A0A0A9J9T3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.7e-05
Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 0 

Query: 30  LHSVLVVMHPDFENLPFHSDFRTESFHFFFILLLNPPSDFLSELEHPILLLLCELCTETL 89
           L  VLVV+HP  E+ P  +D R E      + L++ P D + EL HPILLL  ELC E L
Sbjct: 51  LGEVLVVVHPHLEHAPGDADLRAEGVDGVGVGLVDAPPDAVRELPHPILLLRRELCPEPL 110

Query: 90  F--RQGEGRRRH-NLRIGV 106
              R+G  RR H + R+G+
Sbjct: 111 LARRRGSRRRPHGHQRVGL 129

[Close]
BLAST of Cmc03g0083311 vs. ExPASy TrEMBL
Match: A0A2P5ADE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_343380 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.7e-04
Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 0 

Query: 24  VIFV-LLLHSVLVVMHPDFENLPFHSDFRTESFHFFFILLLNPPSDFLSELEHPILLLLC 83
           +IF+  L  SVLVVMHP+ E++       TE    F ILLLNPPS  L + +HP+LLLL 
Sbjct: 3   IIFLGFLTKSVLVVMHPNLEHVTLDPSLVTELLDQFIILLLNPPSQPLRQPQHPLLLLLA 62

Query: 84  ELCTETLFRQGEGRRRH 100
           +L  + L  +    R H
Sbjct: 63  KLGPKPLLIRRTRIRTH 79

[Close]
BLAST of Cmc03g0083311 vs. ExPASy TrEMBL
Match: A0A2P5EGU1 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_194810 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.7e-04
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 29 LLHSVLVVMHPDFENLPFHSDFRTESFHFFFILLLNPPSDFLSELEHPILLLLCELCTET 88
          L  SVLVVMHP+ E++       TE    F ILLLNPPS  L + +HP+LLLL +L  + 
Sbjct: 9  LTKSVLVVMHPNLEHVTLDPSLVTELLDQFLILLLNPPSQPLRQPQHPLLLLLAKLGPKP 68

Query: 89 LFRQGEG 96
          L  +  G
Sbjct: 69 LLIRRPG 75

The following BLAST results are available for this feature:
BLAST of Cmc03g0083311 vs. NCBI nr
Match NameE-valueIdentityDescription
PON84777.17.6e-0446.27hypothetical protein TorRG33x02_194810 [Trema orientale][more]
PON34552.17.6e-0444.16LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_343380 [Parasponia anderson... [more]
BLAST of Cmc03g0083311 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc03g0083311 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A9J9T39.7e-0544.30Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A2P5ADE83.7e-0444.16Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_343380 PE... [more]
A0A2P5EGU13.7e-0446.27Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_194810 PE=4 SV... [more]
BLAST of Cmc03g0083311 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc03g0083311.1Cmc03g0083311.1mRNA