Cmc03g0082871 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0082871
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr03: 27892719 .. 27895757 (+)
RNA-Seq Expression	Cmc03g0082871
Synteny	Cmc03g0082871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCCTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACAACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAATCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAATCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGCCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCTTCTACCCCTCTATTTCCCACTCCTGATTCACCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACATTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACGTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

mRNA sequence

ATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCCTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACAACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAATCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAATCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGCCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCTTCTACCCCTCTATTTCCCACTCCTGATTCACCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACATTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACGTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

Coding sequence (CDS)

ATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCCTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACAACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAATCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAATCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGCCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCTTCTACCCCTCTATTTCCCACTCCTGATTCACCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACATTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACGTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

Protein sequence

MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS

Homology

[Close]

BLAST of Cmc03g0082871 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1012/1012 (100.00%), Postives = 1012/1012 (100.00%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG
Sbjct: 335  MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 394

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL
Sbjct: 395  QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 454

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG
Sbjct: 455  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 514

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS
Sbjct: 515  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 574

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
            KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Sbjct: 575  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 634

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
            GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH
Sbjct: 635  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 694

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS
Sbjct: 695  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 754

Query: 421  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 480
            PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS
Sbjct: 755  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 814

Query: 481  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 540
            TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP
Sbjct: 815  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 874

Query: 541  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 600
            PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
Sbjct: 875  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 934

Query: 601  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 660
            IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF
Sbjct: 935  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 994

Query: 661  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 720
            ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH
Sbjct: 995  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 1054

Query: 721  FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 780
            FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF
Sbjct: 1055 FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 1114

Query: 781  DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 840
            DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT
Sbjct: 1115 DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 1174

Query: 841  LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 900
            LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
Sbjct: 1175 LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 1234

Query: 901  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 960
            ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND
Sbjct: 1235 ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 1294

Query: 961  CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1013
            CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1295 CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]

BLAST of Cmc03g0082871 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1012/1012 (100.00%), Postives = 1012/1012 (100.00%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG
Sbjct: 303  MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 362

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL
Sbjct: 363  QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 422

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG
Sbjct: 423  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 482

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS
Sbjct: 483  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 542

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
            KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Sbjct: 543  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 602

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
            GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH
Sbjct: 603  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 662

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS
Sbjct: 663  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 722

Query: 421  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 480
            PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS
Sbjct: 723  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 782

Query: 481  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 540
            TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP
Sbjct: 783  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 842

Query: 541  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 600
            PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
Sbjct: 843  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 902

Query: 601  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 660
            IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF
Sbjct: 903  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 962

Query: 661  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 720
            ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH
Sbjct: 963  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 1022

Query: 721  FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 780
            FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF
Sbjct: 1023 FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 1082

Query: 781  DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 840
            DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT
Sbjct: 1083 DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 1142

Query: 841  LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 900
            LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
Sbjct: 1143 LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 1202

Query: 901  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 960
            ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND
Sbjct: 1203 ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 1262

Query: 961  CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1013
            CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1263 CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1314

[Close]

BLAST of Cmc03g0082871 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1012/1012 (100.00%), Postives = 1012/1012 (100.00%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG
Sbjct: 335  MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 394

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL
Sbjct: 395  QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 454

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG
Sbjct: 455  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 514

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS
Sbjct: 515  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 574

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
            KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Sbjct: 575  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 634

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
            GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH
Sbjct: 635  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 694

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS
Sbjct: 695  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 754

Query: 421  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 480
            PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS
Sbjct: 755  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 814

Query: 481  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 540
            TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP
Sbjct: 815  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 874

Query: 541  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 600
            PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
Sbjct: 875  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 934

Query: 601  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 660
            IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF
Sbjct: 935  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 994

Query: 661  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 720
            ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH
Sbjct: 995  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 1054

Query: 721  FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 780
            FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF
Sbjct: 1055 FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 1114

Query: 781  DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 840
            DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT
Sbjct: 1115 DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 1174

Query: 841  LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 900
            LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
Sbjct: 1175 LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 1234

Query: 901  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 960
            ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND
Sbjct: 1235 ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 1294

Query: 961  CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1013
            CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1295 CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]

BLAST of Cmc03g0082871 vs. NCBI nr
Match: KAA0058316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1838.9 bits (4762), Expect = 0.0e+00
Identity = 923/1012 (91.21%), Postives = 924/1012 (91.30%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG
Sbjct: 335  MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 394

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL
Sbjct: 395  QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 454

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG
Sbjct: 455  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 514

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAPCPTVN                                            
Sbjct: 515  LIHSDIWGPAPCPTVN-------------------------------------------- 574

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
                   DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS       
Sbjct: 575  -------DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS------- 634

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
                                     VIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH
Sbjct: 635  -------------------------VIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 694

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS
Sbjct: 695  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 754

Query: 421  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 480
            PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS
Sbjct: 755  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 814

Query: 481  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 540
            TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQAL KTHTWDYVDLP
Sbjct: 815  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALDKTHTWDYVDLP 874

Query: 541  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 600
            PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
Sbjct: 875  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 934

Query: 601  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 660
            IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF
Sbjct: 935  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 994

Query: 661  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 720
            ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH
Sbjct: 995  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 1054

Query: 721  FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 780
            FEMKDLGNLNYF+GLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF
Sbjct: 1055 FEMKDLGNLNYFIGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 1114

Query: 781  DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 840
            DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT
Sbjct: 1115 DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 1174

Query: 841  LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 900
            LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
Sbjct: 1175 LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 1234

Query: 901  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 960
            ESEYRALADATSELIWLRWLLTDM APQTSP ILHCDNHSAIQIAHNDVFHERTKHIEND
Sbjct: 1235 ESEYRALADATSELIWLRWLLTDMRAPQTSPIILHCDNHSAIQIAHNDVFHERTKHIEND 1263

Query: 961  CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1013
            CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKV STLPS
Sbjct: 1295 CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVFSTLPS 1263

[Close]

BLAST of Cmc03g0082871 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1638.2 bits (4241), Expect = 0.0e+00
Identity = 810/1015 (79.80%), Postives = 891/1015 (87.78%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSD SL+++  P +SLPPI++ADGN M+I+H+GT+NTP++ L +TY VPNLTFNL SVG
Sbjct: 330  MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLG T+ FSS+GCQVQD QTGQ IGTGRKVGRLFEL SLQ     P+ISAPVTD+  
Sbjct: 390  QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPS--PSISAPVTDSDT 449

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            +QWHLRLGHAS  KLR L S   LN++++F  F+CL+CK+AKQPALSF  S S+CDKPF 
Sbjct: 450  YQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFD 509

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAP  TV+GYRY+VLFIDD+SRFTWIYFL++RS L + Y++FANMI+TQFS 
Sbjct: 510  LIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSC 569

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
             IK LRTDNA+EYKDS  LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILDSVRA LLS
Sbjct: 570  PIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLS 629

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
             SCPEKFWGEAALTSVY INRLPS V+ NISPFERLYGTPP YS+LKVFGCACFVLL  H
Sbjct: 630  ASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPH 689

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDP+S RLRISRHVTFWEH MFS LSSFHAS SS
Sbjct: 690  EHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSS 749

Query: 421  PHSFFTDPSTPLFPTPDS-PSNTTSCPPLTSELTESHTTSALPELPSVP---CEEPEHAP 480
            P SFFTD S  LFP  +S P N         EL +S  TSA  +  S+     + P   P
Sbjct: 750  PQSFFTDTSIDLFPLSESTPGN---------ELAQSAPTSATSDQSSISDGNPDPPPDIP 809

Query: 481  VRRSTRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDY 540
             RRSTRVRE P HL++YHCFSTI+SL+EP+SY+EAST+PLWQ+AM++ELQAL K HTWDY
Sbjct: 810  PRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDY 869

Query: 541  VDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVR 600
            VDLPPGK+PIGCKWI+KIKTHSDG+IERYKARLVAKGYSQEYGIDYEETFAPVARMTSVR
Sbjct: 870  VDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVR 929

Query: 601  SLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAP 660
            SLLA+AAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGT+ PP KVCLLRRALYGLKQAP
Sbjct: 930  SLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAP 989

Query: 661  RAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCY 720
            RAWFATFSSTITQLGFTSS HD+ALFTR TP GIVLLLLYVDDMIITG+DP AISDLQ Y
Sbjct: 990  RAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHY 1049

Query: 721  LGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVR 780
            LG+HFEMKDLG+LNYFLGLE+S  S GY LSQAKYASDLL RSGITDS T STPLDPNV 
Sbjct: 1050 LGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVH 1109

Query: 781  LTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY 840
            LTP+DGVPLE+ +LYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY
Sbjct: 1110 LTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY 1169

Query: 841  IKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVS 900
            +KGTLGHGLQFSSQSSLVLSG+SDADWAGDPTDRRSTTGYCFYLGD+LISWRSKKQSVVS
Sbjct: 1170 VKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS 1229

Query: 901  RSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKH 960
            RSSTESEYRALADAT+EL+WLRWLL DMG PQ  PT+LHCDN SAIQIAHNDVFHERTKH
Sbjct: 1230 RSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKH 1289

Query: 961  IENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLP 1012
            IENDCHF+RHHL S+TL LQ ISTT+QPADIFTKAL S RF Q+  KLK+ +TLP
Sbjct: 1290 IENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTATLP 1333

[Close]

BLAST of Cmc03g0082871 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.4e-195
Identity = 421/1130 (37.26%), Postives = 601/1130 (53.19%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNL 60
            +TSD + LS H P      +  ADG+++ ISH G+ +  T    + L N  +VPN+  NL
Sbjct: 341  ITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNL 400

Query: 61   ASVGQLCDL-GLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPV 120
             SV +LC+  G+++ F     QV+D  TG  +  G+    L+E       PV    ++P 
Sbjct: 401  ISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPV-SLFASPS 460

Query: 121  TDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASL 180
            +  T   WH RLGH + + L S+ S   L+ ++  + F  C  C + K   + F +S   
Sbjct: 461  SKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTIN 520

Query: 181  CDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMI 240
              +P   I+SD+W  +P  + + YRY+V+F+D ++R+TW+Y L+ +S + + ++ F N++
Sbjct: 521  STRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLL 580

Query: 241  QTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV 300
            + +F ++I    +DN  E+       + +Q G     S PHT + NG +ERKHRHI+++ 
Sbjct: 581  ENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETG 640

Query: 301  RAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACF 360
               L   S P+ +W  A   +VY+INRLP+ ++   SPF++L+GT P Y  L+VFGCAC+
Sbjct: 641  LTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACY 700

Query: 361  VLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEH--------- 420
              L  +   KL+ ++R C FLGY      + C    + RL ISRHV F E+         
Sbjct: 701  PWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLA 760

Query: 421  ---------RMFSSLSSFHASL------------SSPHSFFTDPSTPLF----------- 480
                     R  S + S H +L            S PH   T PS+P             
Sbjct: 761  TLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSN 820

Query: 481  ----------------------------------------------PTPDSPS---NTTS 540
                                                          PT +SPS    + S
Sbjct: 821  LDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLS 880

Query: 541  CPPLTSELTESHTTSA-----LPELPSVPCEEP----------EHAPVR-RSTRVRETPS 600
             P  +S  + S TTSA      P  PS+    P            AP+   S   R    
Sbjct: 881  TPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAG 940

Query: 601  HLKEYHCFSTIMSLV---EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKP 660
             +K    +S  +SL    EP +  +A  +  W+ AM +E+ A    HTWD V  PP    
Sbjct: 941  IIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVT 1000

Query: 661  I-GCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAA 720
            I GC+WIF  K +SDGS+ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L +A  
Sbjct: 1001 IVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVD 1060

Query: 721  KQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TTPPPQKVCLLRRALYGLKQAPRAWFAT 780
            + WP+ Q+DV NAFL GTL+++VYM  PPG      P  VC LR+ALYGLKQAPRAW+  
Sbjct: 1061 RSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVE 1120

Query: 781  FSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFE 840
              + +  +GF +S  D++LF  Q    IV +L+YVDD++ITG+DP  + +    L + F 
Sbjct: 1121 LRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFS 1180

Query: 841  MKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDG 900
            +KD   L+YFLG+E     +G +LSQ +Y  DLL R+ +  +   +TP+ P+ +L+ + G
Sbjct: 1181 VKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSG 1240

Query: 901  VPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLG 960
              L DPT YR +VGSL YL  TRPDI+YAV+ +SQFM  P   H  A+ RILRY+ GT  
Sbjct: 1241 TKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPN 1300

Query: 961  HGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTES 1013
            HG+     ++L L  +SDADWAGD  D  ST GY  YLG   ISW SKKQ  V RSSTE+
Sbjct: 1301 HGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEA 1360

[Close]

BLAST of Cmc03g0082871 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 1.4e-190
Identity = 410/1135 (36.12%), Postives = 593/1135 (52.25%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNL 60
            +TSD + LS H P      +  ADG+++ I+H G+ + PT    + L+   +VPN+  NL
Sbjct: 320  ITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNL 379

Query: 61   ASVGQLCDLG-LTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPV 120
             SV +LC+   +++ F     QV+D  TG  +  G+    L+E   +  S      ++P 
Sbjct: 380  ISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE-WPIASSQAVSMFASPC 439

Query: 121  TDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASL 180
            +  T   WH RLGH S   L S+ S   L  ++       C  C + K   + F  S   
Sbjct: 440  SKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTIT 499

Query: 181  CDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMI 240
              KP   I+SD+W  +P  +++ YRY+V+F+D ++R+TW+Y L+ +S +   ++ F +++
Sbjct: 500  SSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLV 559

Query: 241  QTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV 300
            + +F ++I  L +DN  E+   R   +L+Q G     S PHT + NG +ERKHRHI++  
Sbjct: 560  ENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMG 619

Query: 301  RAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACF 360
               L   S P+ +W  A   +VY+INRLP+ ++   SPF++L+G PP Y  LKVFGCAC+
Sbjct: 620  LTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACY 679

Query: 361  VLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSF 420
              L  +   KLE +++ C F+GY      + C    + RL  SRHV F E     S ++F
Sbjct: 680  PWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNF 739

Query: 421  HASLSSPH---------SFFTDPSTPLF--------------PTPDS------------- 480
              S S            S  T P+TPL               P P S             
Sbjct: 740  GVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSS 799

Query: 481  --PSNTTSCPPLTSELTESHT------------------------------------TSA 540
              PS++ S P  +     SH                                      S 
Sbjct: 800  NLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSP 859

Query: 541  LPE---------LPSVPCEEPEHAPVRRSTRVRETPSHL--------------------- 600
            LP+          PS    EP ++P   ST     P  L                     
Sbjct: 860  LPQSPISSPHIPTPSTSISEP-NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMAT 919

Query: 601  ----------KEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 660
                      ++Y   +++ +  EP +  +A  +  W+QAM +E+ A    HTWD V  P
Sbjct: 920  RAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPP 979

Query: 661  PGKKPI-GCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL 720
            P    I GC+WIF  K +SDGS+ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L
Sbjct: 980  PPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1039

Query: 721  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP--PQKVCLLRRALYGLKQAPR 780
             +A  + WP+ Q+DV NAFL GTL++EVYM  PPG      P  VC LR+A+YGLKQAPR
Sbjct: 1040 GVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1099

Query: 781  AWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYL 840
            AW+    + +  +GF +S  D++LF  Q    I+ +L+YVDD++ITG+D   +      L
Sbjct: 1100 AWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDAL 1159

Query: 841  GKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRL 900
             + F +K+  +L+YFLG+E      G +LSQ +Y  DLL R+ +  +   +TP+  + +L
Sbjct: 1160 SQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKL 1219

Query: 901  TPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYI 960
            T   G  L DPT YR +VGSL YL  TRPD++YAV+ +SQ+M  P   H+ A+ R+LRY+
Sbjct: 1220 TLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYL 1279

Query: 961  KGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSR 1013
             GT  HG+     ++L L  +SDADWAGD  D  ST GY  YLG   ISW SKKQ  V R
Sbjct: 1280 AGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVR 1339

[Close]

BLAST of Cmc03g0082871 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.1e-160
Identity = 355/986 (36.00%), Postives = 533/986 (54.06%), Query Frame = 0


Query: 40   TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFEL 99
            T+ L +  HVP+L  NL S   L   G    F++   ++  ++   VI  G   G L+  
Sbjct: 347  TLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRL--TKGSLVIAKGVARGTLYRT 406

Query: 100  TSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCK 159
             +         ++A   + ++  WH R+GH S   L+ L    L++         C +C 
Sbjct: 407  NA---EICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCL 466

Query: 160  MAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRN 219
              KQ  +SF  S+        L++SD+ GP    ++ G +YFV FIDD SR  W+Y L+ 
Sbjct: 467  FGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKT 526

Query: 220  RSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQ 279
            +  ++Q++  F  +++ +   K+K LR+DN  EY    F  + +  G   +++ P T Q 
Sbjct: 527  KDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQH 586

Query: 280  NGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGT 339
            NG AER +R I++ VR+ L     P+ FWGEA  T+ Y+INR PS  +    P       
Sbjct: 587  NGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNK 646

Query: 340  PPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRH 399
              +YSHLKVFGC  F  +   + TKL+ ++  C F+GYG E  G+R WDP+ +++  SR 
Sbjct: 647  EVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRD 706

Query: 400  VTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPT-PDSPSNTTSCPPLTSELTE---- 459
            V F E  + ++     A +S       +   P F T P + +N TS    T E++E    
Sbjct: 707  VVFRESEVRTA-----ADMSEK---VKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQ 766

Query: 460  --------SHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 519
                          + E+      E +H P+RRS R R           +  I    EP 
Sbjct: 767  PGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTE-YVLISDDREPE 826

Query: 520  SYKEASTNPLWQQ---AMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIE 579
            S KE  ++P   Q   AM  E+++L K  T+  V+LP GK+P+ CKW+FK+K   D  + 
Sbjct: 827  SLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLV 886

Query: 580  RYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTL 639
            RYKARLV KG+ Q+ GID++E F+PV +MTS+R++L++AA+    + Q+DVK AFL+G L
Sbjct: 887  RYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDL 946

Query: 640  SEEVYMKPPPGTTPPPQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSAL 699
             EE+YM+ P G     +K  VC L ++LYGLKQAPR W+  F S +    +  +  D  +
Sbjct: 947  EEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCV 1006

Query: 700  -FTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEI--S 759
             F R + N  ++LLLYVDDM+I G D   I+ L+  L K F+MKDLG     LG++I   
Sbjct: 1007 YFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRE 1066

Query: 760  SSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRL------TPFDGVPLEDPTLYR 819
             +S   +LSQ KY   +L R  + ++   STPL  +++L      T  +         Y 
Sbjct: 1067 RTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYS 1126

Query: 820  QLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 879
              VGSL+Y  V TRPDIA+AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S
Sbjct: 1127 SAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-S 1186

Query: 880  SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 939
              +L G++DAD AGD  +R+S+TGY F      ISW+SK Q  V+ S+TE+EY A  +  
Sbjct: 1187 DPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETG 1246

Query: 940  SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 998
             E+IWL+  L ++G  Q    +++CD+ SAI ++ N ++H RTKHI+   H++R  +   
Sbjct: 1247 KEMIWLKRFLQELGLHQ-KEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDE 1306

[Close]

BLAST of Cmc03g0082871 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 481.5 bits (1238), Expect = 2.4e-134
Identity = 337/1119 (30.12%), Postives = 538/1119 (48.08%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSA---DGNSMSISHIGTV---NTPTIKLSNTYHVPNLTF 60
            + +D SL +  + V  +PP+  A    G  +  +  G V   N   I L +         
Sbjct: 299  LINDESLYTDSVEV--VPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAG 358

Query: 61   NLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPV--FPAIS 120
            NL SV +L + G++I F   G  +  +    V  +G           L + PV  F A S
Sbjct: 359  NLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSG----------MLNNVPVINFQAYS 418

Query: 121  APVTDNTLFQ-WHLRLGHASSNKLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPAL 180
                    F+ WH R GH S  KL  +    + ++ S  N  +     C  C   KQ  L
Sbjct: 419  INAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARL 478

Query: 181  SFP--KSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLY 240
             F   K  +   +P  ++HSD+ GP    T++   YFV+F+D ++ +   Y ++ +S ++
Sbjct: 479  PFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVF 538

Query: 241  QIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAE 300
             ++ DF    +  F+ K+  L  DN  EY  +    F  ++G     + PHT Q NG +E
Sbjct: 539  SMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSE 598

Query: 301  RKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNIS--PFERLYGTPPT 360
            R  R I +  R  +      + FWGEA LT+ Y+INR+PS+ + + S  P+E  +   P 
Sbjct: 599  RMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPY 658

Query: 361  YSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTF 420
              HL+VFG   +V +  ++  K + ++    F+GY  E  GF+ WD ++++  ++R V  
Sbjct: 659  LKHLRVFGATVYVHI-KNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVV 718

Query: 421  WEHRMFSS------------------------------------------LSSFHASLSS 480
             E  M +S                                          +     S  S
Sbjct: 719  DETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKES 778

Query: 481  PHSFFTDPSTPLFPTPDSPSNTTSCPPL-------------------------------- 540
             +  F + S  +  T + P+ +  C  +                                
Sbjct: 779  ENKNFPNDSRKIIQT-EFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGS 838

Query: 541  --TSELTESHTTSALPELPSVPCEEPEHAPV--RRSTRVRETPS-------------HLK 600
               +E  ES T   L E+      + +   +  RRS R++  P               L 
Sbjct: 839  GNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLN 898

Query: 601  EYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWI 660
             +  F+ + +  +   Y++  ++  W++A++ EL A    +TW     P  K  +  +W+
Sbjct: 899  AHTIFNDVPNSFDEIQYRDDKSS--WEEAINTELNAHKINNTWTITKRPENKNIVDSRWV 958

Query: 661  FKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQ 720
            F +K +  G+  RYKARLVA+G++Q+Y IDYEETFAPVAR++S R +L++       + Q
Sbjct: 959  FSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQ 1018

Query: 721  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 780
            MDVK AFLNGTL EE+YM+ P G +     VC L +A+YGLKQA R WF  F   + +  
Sbjct: 1019 MDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECE 1078

Query: 781  FTSSSHDSALF--TRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNL 840
            F +SS D  ++   +   N  + +LLYVDD++I   D   +++ + YL + F M DL  +
Sbjct: 1079 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1138

Query: 841  NYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPT 900
             +F+G+ I       YLSQ+ Y   +L++  + +    STPL   +     +    +  T
Sbjct: 1139 KHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS-DEDCNT 1198

Query: 901  LYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFS 960
              R L+G L+Y+ + TRPD+  AV+I+S++ +   +  +  + R+LRY+KGT+   L F 
Sbjct: 1199 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFK 1258

Query: 961  SQSSL--VLSGFSDADWAGDPTDRRSTTGYCFYLGD-ALISWRSKKQSVVSRSSTESEYR 1005
               +    + G+ D+DWAG   DR+STTGY F + D  LI W +K+Q+ V+ SSTE+EY 
Sbjct: 1259 KNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYM 1318

[Close]

BLAST of Cmc03g0082871 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 3.9e-52
Identity = 110/224 (49.11%), Postives = 146/224 (65.18%), Query Frame = 0


Query: 693 LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYA 752
           LLLYVDD+++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 753 SDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAV 812
             +LN +G+ D    STPL P    +        DP+ +R +VG+L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 813 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRS 872
           +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 873 TTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIW 917
           TTG+C +LG  +ISW +K+Q  VSRSSTE+EYRALA   +EL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc03g0082871 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1012/1012 (100.00%), Postives = 1012/1012 (100.00%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG
Sbjct: 335  MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 394

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL
Sbjct: 395  QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 454

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG
Sbjct: 455  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 514

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS
Sbjct: 515  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 574

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
            KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Sbjct: 575  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 634

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
            GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH
Sbjct: 635  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 694

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS
Sbjct: 695  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 754

Query: 421  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 480
            PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS
Sbjct: 755  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 814

Query: 481  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 540
            TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP
Sbjct: 815  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 874

Query: 541  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 600
            PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
Sbjct: 875  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 934

Query: 601  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 660
            IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF
Sbjct: 935  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 994

Query: 661  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 720
            ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH
Sbjct: 995  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 1054

Query: 721  FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 780
            FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF
Sbjct: 1055 FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 1114

Query: 781  DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 840
            DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT
Sbjct: 1115 DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 1174

Query: 841  LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 900
            LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
Sbjct: 1175 LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 1234

Query: 901  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 960
            ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND
Sbjct: 1235 ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 1294

Query: 961  CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1013
            CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1295 CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]

BLAST of Cmc03g0082871 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1012/1012 (100.00%), Postives = 1012/1012 (100.00%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG
Sbjct: 335  MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 394

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL
Sbjct: 395  QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 454

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG
Sbjct: 455  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 514

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS
Sbjct: 515  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 574

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
            KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Sbjct: 575  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 634

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
            GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH
Sbjct: 635  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 694

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS
Sbjct: 695  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 754

Query: 421  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 480
            PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS
Sbjct: 755  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 814

Query: 481  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 540
            TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP
Sbjct: 815  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 874

Query: 541  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 600
            PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
Sbjct: 875  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 934

Query: 601  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 660
            IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF
Sbjct: 935  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 994

Query: 661  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 720
            ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH
Sbjct: 995  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 1054

Query: 721  FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 780
            FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF
Sbjct: 1055 FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 1114

Query: 781  DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 840
            DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT
Sbjct: 1115 DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 1174

Query: 841  LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 900
            LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
Sbjct: 1175 LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 1234

Query: 901  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 960
            ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND
Sbjct: 1235 ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 1294

Query: 961  CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1013
            CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1295 CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]

BLAST of Cmc03g0082871 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1012/1012 (100.00%), Postives = 1012/1012 (100.00%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG
Sbjct: 303  MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 362

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL
Sbjct: 363  QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 422

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG
Sbjct: 423  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 482

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS
Sbjct: 483  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 542

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
            KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Sbjct: 543  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 602

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
            GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH
Sbjct: 603  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 662

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS
Sbjct: 663  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 722

Query: 421  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 480
            PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS
Sbjct: 723  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 782

Query: 481  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 540
            TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP
Sbjct: 783  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 842

Query: 541  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 600
            PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
Sbjct: 843  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 902

Query: 601  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 660
            IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF
Sbjct: 903  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 962

Query: 661  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 720
            ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH
Sbjct: 963  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 1022

Query: 721  FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 780
            FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF
Sbjct: 1023 FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 1082

Query: 781  DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 840
            DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT
Sbjct: 1083 DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 1142

Query: 841  LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 900
            LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
Sbjct: 1143 LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 1202

Query: 901  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 960
            ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND
Sbjct: 1203 ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 1262

Query: 961  CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1013
            CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1263 CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1314

[Close]

BLAST of Cmc03g0082871 vs. ExPASy TrEMBL
Match: A0A5A7UVX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006520 PE=4 SV=1)

HSP 1 Score: 1838.9 bits (4762), Expect = 0.0e+00
Identity = 923/1012 (91.21%), Postives = 924/1012 (91.30%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG
Sbjct: 335  MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 394

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL
Sbjct: 395  QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 454

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG
Sbjct: 455  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 514

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAPCPTVN                                            
Sbjct: 515  LIHSDIWGPAPCPTVN-------------------------------------------- 574

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
                   DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS       
Sbjct: 575  -------DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS------- 634

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
                                     VIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH
Sbjct: 635  -------------------------VIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 694

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS
Sbjct: 695  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 754

Query: 421  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 480
            PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS
Sbjct: 755  PHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRS 814

Query: 481  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLP 540
            TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQAL KTHTWDYVDLP
Sbjct: 815  TRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALDKTHTWDYVDLP 874

Query: 541  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 600
            PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
Sbjct: 875  PGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA 934

Query: 601  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 660
            IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF
Sbjct: 935  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWF 994

Query: 661  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 720
            ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH
Sbjct: 995  ATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKH 1054

Query: 721  FEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 780
            FEMKDLGNLNYF+GLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF
Sbjct: 1055 FEMKDLGNLNYFIGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPF 1114

Query: 781  DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 840
            DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT
Sbjct: 1115 DGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGT 1174

Query: 841  LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 900
            LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
Sbjct: 1175 LGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST 1234

Query: 901  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIEND 960
            ESEYRALADATSELIWLRWLLTDM APQTSP ILHCDNHSAIQIAHNDVFHERTKHIEND
Sbjct: 1235 ESEYRALADATSELIWLRWLLTDMRAPQTSPIILHCDNHSAIQIAHNDVFHERTKHIEND 1263

Query: 961  CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1013
            CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKV STLPS
Sbjct: 1295 CHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVFSTLPS 1263

[Close]

BLAST of Cmc03g0082871 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 1638.2 bits (4241), Expect = 0.0e+00
Identity = 810/1015 (79.80%), Postives = 891/1015 (87.78%), Query Frame = 0


Query: 1    MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVG 60
            MTSD SL+++  P +SLPPI++ADGN M+I+H+GT+NTP++ L +TY VPNLTFNL SVG
Sbjct: 330  MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389

Query: 61   QLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTL 120
            QLCDLG T+ FSS+GCQVQD QTGQ IGTGRKVGRLFEL SLQ     P+ISAPVTD+  
Sbjct: 390  QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPS--PSISAPVTDSDT 449

Query: 121  FQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFG 180
            +QWHLRLGHAS  KLR L S   LN++++F  F+CL+CK+AKQPALSF  S S+CDKPF 
Sbjct: 450  YQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFD 509

Query: 181  LIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSS 240
            LIHSDIWGPAP  TV+GYRY+VLFIDD+SRFTWIYFL++RS L + Y++FANMI+TQFS 
Sbjct: 510  LIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSC 569

Query: 241  KIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS 300
             IK LRTDNA+EYKDS  LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILDSVRA LLS
Sbjct: 570  PIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLS 629

Query: 301  GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSH 360
             SCPEKFWGEAALTSVY INRLPS V+ NISPFERLYGTPP YS+LKVFGCACFVLL  H
Sbjct: 630  ASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPH 689

Query: 361  EHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSS 420
            EHTKLEPRARLCCFLGYGTEHKGFRCWDP+S RLRISRHVTFWEH MFS LSSFHAS SS
Sbjct: 690  EHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSS 749

Query: 421  PHSFFTDPSTPLFPTPDS-PSNTTSCPPLTSELTESHTTSALPELPSVP---CEEPEHAP 480
            P SFFTD S  LFP  +S P N         EL +S  TSA  +  S+     + P   P
Sbjct: 750  PQSFFTDTSIDLFPLSESTPGN---------ELAQSAPTSATSDQSSISDGNPDPPPDIP 809

Query: 481  VRRSTRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDY 540
             RRSTRVRE P HL++YHCFSTI+SL+EP+SY+EAST+PLWQ+AM++ELQAL K HTWDY
Sbjct: 810  PRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDY 869

Query: 541  VDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVR 600
            VDLPPGK+PIGCKWI+KIKTHSDG+IERYKARLVAKGYSQEYGIDYEETFAPVARMTSVR
Sbjct: 870  VDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVR 929

Query: 601  SLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAP 660
            SLLA+AAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGT+ PP KVCLLRRALYGLKQAP
Sbjct: 930  SLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAP 989

Query: 661  RAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCY 720
            RAWFATFSSTITQLGFTSS HD+ALFTR TP GIVLLLLYVDDMIITG+DP AISDLQ Y
Sbjct: 990  RAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHY 1049

Query: 721  LGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVR 780
            LG+HFEMKDLG+LNYFLGLE+S  S GY LSQAKYASDLL RSGITDS T STPLDPNV 
Sbjct: 1050 LGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVH 1109

Query: 781  LTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY 840
            LTP+DGVPLE+ +LYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY
Sbjct: 1110 LTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY 1169

Query: 841  IKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVS 900
            +KGTLGHGLQFSSQSSLVLSG+SDADWAGDPTDRRSTTGYCFYLGD+LISWRSKKQSVVS
Sbjct: 1170 VKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS 1229

Query: 901  RSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKH 960
            RSSTESEYRALADAT+EL+WLRWLL DMG PQ  PT+LHCDN SAIQIAHNDVFHERTKH
Sbjct: 1230 RSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKH 1289

Query: 961  IENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLP 1012
            IENDCHF+RHHL S+TL LQ ISTT+QPADIFTKAL S RF Q+  KLK+ +TLP
Sbjct: 1290 IENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTATLP 1333

[Close]

BLAST of Cmc03g0082871 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 484.6 bits (1246), Expect = 2.0e-136
Identity = 257/552 (46.56%), Postives = 351/552 (63.59%), Query Frame = 0


Query: 448 LTSELTESHTTSALPELPSVPCEEPEHAP-VRRSTRVRETPSHLKEYHCFST-------- 507
           + S+   S ++S++  +PS   +     P V  S R    P++L++Y+C S         
Sbjct: 1   MVSDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDI 60

Query: 508 -------------------IMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDL 567
                              I    EPS+Y EA    +W  AMD+E+ A+  THTW+   L
Sbjct: 61  SQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTL 120

Query: 568 PPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL 627
           PP KKPIGCKW++KIK +SDG+IERYKARLVAKGY+Q+ GID+ ETF+PV ++TSV+ +L
Sbjct: 121 PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLIL 180

Query: 628 AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPP------GTTPPPQKVCLLRRALYGLK 687
           AI+A   + L Q+D+ NAFLNG L EE+YMK PP      G + PP  VC L++++YGLK
Sbjct: 181 AISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLK 240

Query: 688 QAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDL 747
           QA R WF  FS T+   GF  S  D   F + T    + +L+YVDD+II  ++  A+ +L
Sbjct: 241 QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 300

Query: 748 QCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDP 807
           +  L   F+++DLG L YFLGLEI+ S++G  + Q KYA DLL+ +G+      S P+DP
Sbjct: 301 KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360

Query: 808 NVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRI 867
           +V  +   G    D   YR+L+G L+YL +TR DI++AV+ +SQF  APR  H  AV++I
Sbjct: 361 SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 420

Query: 868 LRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQS 927
           L YIKGT+G GL +SSQ+ + L  FSDA +      RRST GYC +LG +LISW+SKKQ 
Sbjct: 421 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480

Query: 928 VVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHER 966
           VVS+SS E+EYRAL+ AT E++WL     ++  P + PT+L CDN +AI IA N VFHER
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540

[Close]

BLAST of Cmc03g0082871 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 2.7e-53
Identity = 110/224 (49.11%), Postives = 146/224 (65.18%), Query Frame = 0


Query: 693 LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYA 752
           LLLYVDD+++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 753 SDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAV 812
             +LN +G+ D    STPL P    +        DP+ +R +VG+L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 813 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRS 872
           +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 873 TTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIW 917
           TTG+C +LG  +ISW +K+Q  VSRSSTE+EYRALA   +EL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc03g0082871 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-22
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 504 EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIE 563
           EP S   A  +P W QAM  EL AL++  TW  V  P  +  +GCKW+FK K HSDG+++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 564 RYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA 603
           R KARLVAKG+ QE GI + ET++PV R  ++R++L +A
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of Cmc03g0082871 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 90.9 bits (224), Expect = 6.4e-18
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 799 IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGF 858
           +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 859 SDADWAGDPTDRRSTTGYC 878
           +D+DWA  P  RRS TG+C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc03g0082871 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043149.1	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0065380.1	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0036574.1	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0058316.1	0.0e+00	91.21	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	0.0e+00	79.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc03g0082871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.4e-195	37.26	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.4e-190	36.12	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	1.1e-160	36.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.4e-134	30.12	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	3.9e-52	49.11	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc03g0082871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DG18	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SZ66	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VDW0	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UVX4	0.0e+00	91.21	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VIT8	0.0e+00	79.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc03g0082871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.0e-136	46.56	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.7e-53	49.11	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	4.3e-22	49.49	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	6.4e-18	51.90	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 532..771 e-value: 2.1E-75 score: 253.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 173..349 e-value: 4.2E-37 score: 129.4
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 177..276 e-value: 4.8E-13 score: 49.3
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 174..340 score: 20.299007
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 109..163 e-value: 1.9E-9 score: 37.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 429..462
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 429..483
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 22..891
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 857..995 e-value: 1.15258E-79 score: 253.545
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 531..962
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 176..349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0082871.1	Cmc03g0082871.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding