Cmc03g0081961 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0081961
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr03: 27363362 .. 27365124 (+)
RNA-Seq Expression	Cmc03g0081961
Synteny	Cmc03g0081961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATTTGTTTTTTCTATTGGAGTCTATACTCAGATATTTAAATATAATTTTTTTTTAAATAAGTCAGTAACATTATAAATATTTAATCATCGATCAAACATATATAAAAAAAATTCTCTCAATGATCTCATATGATAATAACAATTAACCACTCCATCCTCCATCCGATAATCTTTTTCTTTCTTGTTTTATAATCCATTTTTTTAAAAAAAGAAAGAAATAAATAAAACTTTACTCGTATTTTAAAAATACGAAACTTTCGTACACATATCATACAAAATGATCTAATAATCATTAACCTCTAAGATTAAAATCGGATAAAACATCCCCTTCTTCATTTTCACATATGCACAAACCTCTCCTGGAAAATGATAACAATGGAATCAAAACGTCTATTTTACAACCAAACTAAAAATCAATCATAAAAGAATGAAATAAAAAGAAAGAAGATGAAAAAATAATTGTGGGAGCTTTTTCACTTTGAAAAAAGAAAAAGGAAAAATAATTTTAATGAAATTTAAAGTTAAAAGGAGTAGACGAAGCTCCAAACTATCCTACCGTTGAAACGGTCAGTGGAAGCAGAGCCGGGCCCATGGGTCCATCCCCCCCTGGGACCCACACCAATTGACCCGGTTCAACAAACGGATTCCATAACCGAGTCGACTCGACCGAGTCCACCACCATTACCATCCTCTTCTCCTCTTTCAACCGCTTCTTCTCCGCCACTTTCCCTTTCGTAATTTTCACCAATTCCCAAAATTCCTCGTTCTTCCCTCTGTTCACAAACAACACACTCACTTTCCATCTGCAGTTTTCCAACCGTATCAAAATACCTACCAACTCACTCAACTCGTCCACACTCAATCTCTCAACTCTCTCTCCGATTTCTTTAACTCGTACCCAAATCTCCCTCTGAACCAATCTGTAATTCTCAAGAACCAATCTCACGACCTCGTAAACCAAATCCTTCTTCTGAAGATGCAGCGATTCCGGAACTTCGCAAATTCGTTCCACAAAACCCACAAGAACCACCAACTCCTCCGCTAAATCAACCTTCCACTTCCTCCCACCTTCGTCAATTTCGCAATTTCTCGAACGAAAATACAGAATCCGATCCAATTTCCTGTCCACAATCACGTTATGCTCCACGACCCCTGCATACCATCTTACCCATGACGACAAGTCGTTCATCTCCGAGTCCGATACGTCGCGAAACGCGGACAAGTTGAGAAAATTCCGCCCACCGTAACTGGGGAAAAACGACACCTGATCCCTCAGATTGAACGGACCTCGAATAACAATTATATGGAGAGTGAAAAGCGATTTCATGGCCACGGCGGCGCTCGAGGTCGTATGAAGCCGGTTCATTAGCGCTTCGATGCAGGCGAATGCAGTGGAGGAACGGAAGTCATTCCCAAGGGCTAGCACGGCAGCGACTCGGGCATCGGAAGGTGGGTTTCGAGCGCCGTGCGTGGTAGCACGGACGACGGCGACTTTGATGGAAGACGAACGGCGGTTAATGGAGAAATTGGCTTTGATTATGGAAGCTTTGTCTTTGAGAGCGTGTGTGAGATTCTTGAGTTTCTTGCTTTGGTGTATAGCCATCGCATATTTTTAGATGATTTCAAAGTAGGAGAGAGAGGCTAAATAAATTGATGTTCAAATTTGACTAACTTTTGTAATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTAATATATTTGTAAAGGAAA

mRNA sequence

TTTTAATTTGTTTTTTCTATTGGAGTCTATACTCAGATATTTAAATATAATTTTTTTTTAAATAAGTCAGTAACATTATAAATATTTAATCATCGATCAAACATATATAAAAAAAATTCTCTCAATGATCTCATATGATAATAACAATTAACCACTCCATCCTCCATCCGATAATCTTTTTCTTTCTTGTTTTATAATCCATTTTTTTAAAAAAAGAAAGAAATAAATAAAACTTTACTCGTATTTTAAAAATACGAAACTTTCGTACACATATCATACAAAATGATCTAATAATCATTAACCTCTAAGATTAAAATCGGATAAAACATCCCCTTCTTCATTTTCACATATGCACAAACCTCTCCTGGAAAATGATAACAATGGAATCAAAACGTCTATTTTACAACCAAACTAAAAATCAATCATAAAAGAATGAAATAAAAAGAAAGAAGATGAAAAAATAATTGTGGGAGCTTTTTCACTTTGAAAAAAGAAAAAGGAAAAATAATTTTAATGAAATTTAAAGTTAAAAGGAGTAGACGAAGCTCCAAACTATCCTACCGTTGAAACGGTCAGTGGAAGCAGAGCCGGGCCCATGGGTCCATCCCCCCCTGGGACCCACACCAATTGACCCGGTTCAACAAACGGATTCCATAACCGAGTCGACTCGACCGAGTCCACCACCATTACCATCCTCTTCTCCTCTTTCAACCGCTTCTTCTCCGCCACTTTCCCTTTCGTAATTTTCACCAATTCCCAAAATTCCTCGTTCTTCCCTCTGTTCACAAACAACACACTCACTTTCCATCTGCAGTTTTCCAACCGTATCAAAATACCTACCAACTCACTCAACTCGTCCACACTCAATCTCTCAACTCTCTCTCCGATTTCTTTAACTCGTACCCAAATCTCCCTCTGAACCAATCTGTAATTCTCAAGAACCAATCTCACGACCTCGTAAACCAAATCCTTCTTCTGAAGATGCAGCGATTCCGGAACTTCGCAAATTCGTTCCACAAAACCCACAAGAACCACCAACTCCTCCGCTAAATCAACCTTCCACTTCCTCCCACCTTCGTCAATTTCGCAATTTCTCGAACGAAAATACAGAATCCGATCCAATTTCCTGTCCACAATCACGTTATGCTCCACGACCCCTGCATACCATCTTACCCATGACGACAAGTCGTTCATCTCCGAGTCCGATACGTCGCGAAACGCGGACAAGTTGAGAAAATTCCGCCCACCGTAACTGGGGAAAAACGACACCTGATCCCTCAGATTGAACGGACCTCGAATAACAATTATATGGAGAGTGAAAAGCGATTTCATGGCCACGGCGGCGCTCGAGGTCGTATGAAGCCGGTTCATTAGCGCTTCGATGCAGGCGAATGCAGTGGAGGAACGGAAGTCATTCCCAAGGGCTAGCACGGCAGCGACTCGGGCATCGGAAGGTGGGTTTCGAGCGCCGTGCGTGGTAGCACGGACGACGGCGACTTTGATGGAAGACGAACGGCGGTTAATGGAGAAATTGGCTTTGATTATGGAAGCTTTGTCTTTGAGAGCGTGTGTGAGATTCTTGAGTTTCTTGCTTTGGTGTATAGCCATCGCATATTTTTAGATGATTTCAAAGTAGGAGAGAGAGGCTAAATAAATTGATGTTCAAATTTGACTAACTTTTGTAATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTAATATATTTGTAAAGGAAA

Coding sequence (CDS)

ATGCAGGCGAATGCAGTGGAGGAACGGAAGTCATTCCCAAGGGCTAGCACGGCAGCGACTCGGGCATCGGAAGGTGGGTTTCGAGCGCCGTGCGTGGTAGCACGGACGACGGCGACTTTGATGGAAGACGAACGGCGGTTAATGGAGAAATTGGCTTTGATTATGGAAGCTTTGTCTTTGAGAGCGTGTGTGAGATTCTTGAGTTTCTTGCTTTGGTGTATAGCCATCGCATATTTTTAG

Protein sequence

MQANAVEERKSFPRASTAATRASEGGFRAPCVVARTTATLMEDERRLMEKLALIMEALSLRACVRFLSFLLWCIAIAYF

Homology

The following BLAST results are available for this feature:

BLAST of Cmc03g0081961 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc03g0081961 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc03g0081961 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc03g0081961 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0081961.1	Cmc03g0081961.1	mRNA