Cmc03g0081291 (gene) Melon (Charmono) v1.1

Overview
NameCmc03g0081291
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr03: 26884016 .. 26887000 (+)
RNA-Seq ExpressionCmc03g0081291
SyntenyCmc03g0081291
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGCTACAGAAAGCTGAGTTGTATGTGTGGAATTGATGAAAACCAGAAGAAAGTCCAATCAATGGAGCTTTCAAGAACAAGAACAAAGAAGAAGAAGAAGAAGAAGAAAAAGATGGAGAGGAAGAGGAAAACCCCAATTTGCCCCTCATAAATCCATTTCTGTACGTTACTTTTTACCTTTCCTTTTCAAATTCTCATTACCCTTTTCCAAAATTAACCAAATTTTACACAGTCAGTCAATCAATCCTCTGCCATTTCTAGAATCTCGCATTTTCAAAGCCGTGTAAATCCCCCACTCTACTAGTCAACGATTTTTTCATAATCGCCACTCTGGCAAGCTTCTCCGCCGCCCTCCACGCCGACGTCGGTGTTAACGGCTCTCCGTTTTCATCCACCATGGTCGGATTTTCCTTATCACCCCCTCGCCTTCGTGGCGTTGTTGTCACTAAAACTTGTTGTTGCTGCAGCTGCTGCTGCTGCTGCTGCTGATGTAATTCGAATTGTTGTTGCCTTCGCCAATGGAGTTCCGCCAGCTCAACTTCCAGCTCCCGCACGTACACGTCAGAACTCGGTGATCCGGATTGGATTAGTAATGCACGCGCCGAGGCGAGTAAATGATGAGCGCTCGTATGGTCTTCGTACTCGATCAATCTCCTGGATTCCGCCACAGCGCGAGTAGTTATGAACATGTCTCTAAGCCGTTCGATCTTAGGAGTGGATGATCCAACGGCTGTGGGTCGTGCAATGAGGATGTCTTGTTCTCGGCTGTACACTACTTCTTGTGTGGATGGGTCTTTGTAAAGACATTGCATCGTCATCACGTGGTGGGTCCCAGAAGCCGAGGTTGGAATCTTCAACTCTACGAGTAATTCCCTTTCTTCCTCGGCGTATAAATCTCCAAGCCGGACCGAACCCAAACTGCAAACCGTGGGCCTCCCGGTACATGAATAAATAGCGGAGATCACAACCGGAGATGAACCGGTTGAGAACCCGAGTTGAATACGGAGATCTTGAACCACCACGCTTAATAATCCACTTACACATTTTGCAAATGCGTCCTCCGCCGGTTCTTGACAGTATCCACCGCTCTTCCCGAACCCAAATGCATGAACCGGGATTTCTATGTGGGCGAACCGTGTAGATGACTCGTGTCGTGTCACCTGCCGTTGATTTGACTGGATCCGTTCATCTTGGCCGTCTGACAAAAGCATGATGCTAGCTACTGGGTTTCTCTCTCGCCGGTCCTCGAGTACTTTTGTGGCTTTTCTCAAAGCCTCTCCCACGCTCGTTCCTTGGCTGCAGACCAGAGTGTCAATCACGTGCCGGGCAGCGCGTTGGCCTTGAGCCGTCATTCTCCTCAACGGCAACACCCTTTTAGGAGTGGCAGAGAAAGCAACGATGGCGAGGCGGTCCGATGAGCCTAACGACGAAATAACCAATCGCATGGCACGCTTCAGCATCATTAATTTCGGCCCCGTCATGCTTCCGCTTACATCCAGCACTGTCACTAAATCAATCGGCGCACGGCGGGATGGGTCTAATAAATTGGCATTTGCTCTGTTTCTAGCCGGATGTGGCGGCGGTGCTTTTACTTTCAGAGCCACTGCGTAGGTCTCGTGGGTGTGTCCAGATGAAATCAACGCCGTTTCAGGGAGGAGTCGAACCTGTACATTGGTCCTCTGAATTGAAGATTTAACCGAACTGGAAGGCGGCTTTGGGTCAACGAAAAAGCCTTGAAATTCCTCCCCATCGTCTTGGTTCTCGTCGGCTTCAGGGATTGGGATAATCCGGCCACCAGAGGTTGGAGACAAAAGAGGCTCATCGTCATCATAGGATCTCAATTCCTTTTCTTTTGGGTTTAGTTTGGTTTTAACGGCTCTGGGGGAAGATTCAATCATGGTTTTATCTTCAATCTTGGGTTTGGGATCGTGTTGGGTCAATGGGCCCAAATTCTTATGGGCGGCGAGCAGAGGAACGTCCTTCCATGTGGTGTTGCAGACAGGGCAAACAAGAGAGGCATGGTTTCTGACATGAGCGGCAATACAAGGAAAATGAAACGCATGCCCACATTCCGCCGTGTAAATCGCCGTCCCATGCCCTGTTTTCACGCTATTCAAACAAATTCCACAGCTACTCTGTTTTTCAACAAATAAAAAAAACCCGTAAGTCAAGTTTCTAATGCTACATGAAAAAACACAGAGAAAGATAGAGAGAGAACAAAAATAAAAAAAAGAACGTACTCTGAACTTAAAGCTGTTCTTGAAAAGAGAGAGTTTAAGAGGGGAACGAGGAGAAGAAGGATTCGAACCCAAAATCCCTCGTTGGGATTTAGCAGATTTAGGGGTTGATGAAGAGGAAGATGAGGTTTTGCAATGAAGAGTGGGACTTTGATTAACAGTGGCATCTTGAGCAGTACGGCAACGAAGACCTGGACTACTCAATGGTTGATGAGATTGCATCCGAGGAGTAGAAGGGTTACTGAAGAAACCCAATCGAACACAGCTTCTAGGACTGGGATTAGGAGTAGCAGAGCTCCTCTGTTTCTCAGAAACATGATTAGATTCTGAATCTCGAGAAATGGTAGTACAAAACGCTTTCCTCCAACCAGTACCCATTTGAGGGAAGAAGAGGAAGAGAAAGGAGAAAACGTAATAGAGTAAGCAAAAAAGCGAAAAAGAGGTAGTTTAAATTAACGAAGAAGATAGATCTGAATTGTGGGAGAAAGGGGACAAAAGAAAAACAGAATATGGCATGGGGATCATCAGAAAGAAAAGGGGAAAAAAAAAAAGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATAATGAAGAAGAAGACAATGTAAAGTTTGGATTGTTGATTGTCCTTGGTTGGTGTTCGGAATGGAATGGGTATTTATTAAAATTTTAAAATGTTGGGTTATTTGGCTTTTCTCTTTTAGTTATCGAT

mRNA sequence

GAAAGCTACAGAAAGCTGAGTTGTATGTGTGGAATTGATGAAAACCAGAAGAAAGTCCAATCAATGGAGCTTTCAAGAACAAGAACAAAGAAGAAGAAGAAGAAGAAGAAAAAGATGGAGAGGAAGAGGAAAACCCCAATTTGCCCCTCATAAATCCATTTCTGTACGTTACTTTTTACCTTTCCTTTTCAAATTCTCATTACCCTTTTCCAAAATTAACCAAATTTTACACAGTCAGTCAATCAATCCTCTGCCATTTCTAGAATCTCGCATTTTCAAAGCCGTGTAAATCCCCCACTCTACTAGTCAACGATTTTTTCATAATCGCCACTCTGGCAAGCTTCTCCGCCGCCCTCCACGCCGACGTCGGTGTTAACGGCTCTCCGTTTTCATCCACCATGGTCGGATTTTCCTTATCACCCCCTCGCCTTCGTGGCGTTGTTGTCACTAAAACTTGTTGTTGCTGCAGCTGCTGCTGCTGCTGCTGCTGATGTAATTCGAATTGTTGTTGCCTTCGCCAATGGAGTTCCGCCAGCTCAACTTCCAGCTCCCGCACGTACACGTCAGAACTCGGTGATCCGGATTGGATTAGTAATGCACGCGCCGAGGCGAGTAAATGATGAGCGCTCGTATGGTCTTCGTACTCGATCAATCTCCTGGATTCCGCCACAGCGCGAGTAGTTATGAACATGTCTCTAAGCCGTTCGATCTTAGGAGTGGATGATCCAACGGCTGTGGGTCGTGCAATGAGGATGTCTTGTTCTCGGCTGTACACTACTTCTTGTGTGGATGGGTCTTTGTAAAGACATTGCATCGTCATCACGTGGTGGGTCCCAGAAGCCGAGGTTGGAATCTTCAACTCTACGAGTAATTCCCTTTCTTCCTCGGCGTATAAATCTCCAAGCCGGACCGAACCCAAACTGCAAACCGTGGGCCTCCCGGTACATGAATAAATAGCGGAGATCACAACCGGAGATGAACCGGTTGAGAACCCGAGTTGAATACGGAGATCTTGAACCACCACGCTTAATAATCCACTTACACATTTTGCAAATGCGTCCTCCGCCGGTTCTTGACAGTATCCACCGCTCTTCCCGAACCCAAATGCATGAACCGGGATTTCTATGTGGGCGAACCGTGTAGATGACTCGTGTCGTGTCACCTGCCGTTGATTTGACTGGATCCGTTCATCTTGGCCGTCTGACAAAAGCATGATGCTAGCTACTGGGTTTCTCTCTCGCCGGTCCTCGAGTACTTTTGTGGCTTTTCTCAAAGCCTCTCCCACGCTCGTTCCTTGGCTGCAGACCAGAGTGTCAATCACGTGCCGGGCAGCGCGTTGGCCTTGAGCCGTCATTCTCCTCAACGGCAACACCCTTTTAGGAGTGGCAGAGAAAGCAACGATGGCGAGGCGGTCCGATGAGCCTAACGACGAAATAACCAATCGCATGGCACGCTTCAGCATCATTAATTTCGGCCCCGTCATGCTTCCGCTTACATCCAGCACTGTCACTAAATCAATCGGCGCACGGCGGGATGGGTCTAATAAATTGGCATTTGCTCTGTTTCTAGCCGGATGTGGCGGCGGTGCTTTTACTTTCAGAGCCACTGCGTAGGTCTCGTGGGTGTGTCCAGATGAAATCAACGCCGTTTCAGGGAGGAGTCGAACCTGTACATTGGTCCTCTGAATTGAAGATTTAACCGAACTGGAAGGCGGCTTTGGGTCAACGAAAAAGCCTTGAAATTCCTCCCCATCGTCTTGGTTCTCGTCGGCTTCAGGGATTGGGATAATCCGGCCACCAGAGGTTGGAGACAAAAGAGGCTCATCGTCATCATAGGATCTCAATTCCTTTTCTTTTGGGTTTAGTTTGGTTTTAACGGCTCTGGGGGAAGATTCAATCATGGTTTTATCTTCAATCTTGGGTTTGGGATCGTGTTGGGTCAATGGGCCCAAATTCTTATGGGCGGCGAGCAGAGGAACGTCCTTCCATGTGGTGTTGCAGACAGGGCAAACAAGAGAGGCATGGTTTCTGACATGAGCGGCAATACAAGGAAAATGAAACGCATGCCCACATTCCGCCGTGTAAATCGCCGTCCCATGCCCTGTTTTCACGCTATTCAAACAAATTCCACAGCTACTCTGTTTTTCAACAAATAAAAAAAACCCGTAAGTCAAGTTTCTAATGCTACATGAAAAAACACAGAGAAAGATAGAGAGAGAACAAAAATAAAAAAAAGAACGTACTCTGAACTTAAAGCTGTTCTTGAAAAGAGAGAGTTTAAGAGGGGAACGAGGAGAAGAAGGATTCGAACCCAAAATCCCTCGTTGGGATTTAGCAGATTTAGGGGTTGATGAAGAGGAAGATGAGGTTTTGCAATGAAGAGTGGGACTTTGATTAACAGTGGCATCTTGAGCAGTACGGCAACGAAGACCTGGACTACTCAATGGTTGATGAGATTGCATCCGAGGAGTAGAAGGGTTACTGAAGAAACCCAATCGAACACAGCTTCTAGGACTGGGATTAGGAGTAGCAGAGCTCCTCTGTTTCTCAGAAACATGATTAGATTCTGAATCTCGAGAAATGGTAGTACAAAACGCTTTCCTCCAACCAGTACCCATTTGAGGGAAGAAGAGGAAGAGAAAGGAGAAAACGTAATAGAGTAAGCAAAAAAGCGAAAAAGAGGTAGTTTAAATTAACGAAGAAGATAGATCTGAATTGTGGGAGAAAGGGGACAAAAGAAAAACAGAATATGGCATGGGGATCATCAGAAAGAAAAGGGGAAAAAAAAAAAGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATAATGAAGAAGAAGACAATGTAAAGTTTGGATTGTTGATTGTCCTTGGTTGGTGTTCGGAATGGAATGGGTATTTATTAAAATTTTAAAATGTTGGGTTATTTGGCTTTTCTCTTTTAGTTATCGAT

Coding sequence (CDS)

ATGGCGAGGCGGTCCGATGAGCCTAACGACGAAATAACCAATCGCATGGCACGCTTCAGCATCATTAATTTCGGCCCCGTCATGCTTCCGCTTACATCCAGCACTGTCACTAAATCAATCGGCGCACGGCGGGATGGGTCTAATAAATTGGCATTTGCTCTGTTTCTAGCCGGATGTGGCGGCGGTGCTTTTACTTTCAGAGCCACTGCGTAG

Protein sequence

MARRSDEPNDEITNRMARFSIINFGPVMLPLTSSTVTKSIGARRDGSNKLAFALFLAGCGGGAFTFRATA
Homology
[Close]
BLAST of Cmc03g0081291 vs. NCBI nr
Match: GFA12997.1 (von Willebrand factor, type A [Tanacetum cinerariifolium])

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-04
Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 4   RSDEPNDEITNRMARFSIINFGPVMLPLTSSTVTKSIGARRDGSNKLAFALFLAGCGGGA 63
           RS EP++EITN +A F I N  P +L LTS+T TKSIGAR D  +  A        GGGA
Sbjct: 512 RSAEPSEEITNLIALFIICNLAPPILALTSNTATKSIGARADPLSTRA--------GGGA 570

Query: 64  FTFRATA 71
            T   TA
Sbjct: 572 LTLSTTA 570

[Close]
BLAST of Cmc03g0081291 vs. ExPASy TrEMBL
Match: A0A7N0UHH0 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04
Identity = 28/41 (68.29%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 4   RSDEPNDEITNRMARFSIINFGPVMLPLTSSTVTKSIGARR 45
           RSD P  EIT R+ARFS+ N  P MLPLTS T TKSIGA R
Sbjct: 66  RSDVPRKEITRRIARFSMCNLEPPMLPLTSRTATKSIGAAR 106

The following BLAST results are available for this feature:
BLAST of Cmc03g0081291 vs. NCBI nr
Match NameE-valueIdentityDescription
GFA12997.11.7e-0450.75von Willebrand factor, type A [Tanacetum cinerariifolium][more]
BLAST of Cmc03g0081291 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc03g0081291 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7N0UHH01.1e-0468.29Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1[more]
BLAST of Cmc03g0081291 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc03g0081291.1Cmc03g0081291.1mRNA