Cmc03g0081181 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0081181
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Epidermal patterning factor-like protein
Location	CMiso1.1chr03: 26799673 .. 26800579 (+)
RNA-Seq Expression	Cmc03g0081181
Synteny	Cmc03g0081181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGCACTCACTCAATCTCTGATACTCTTTTTCTTTCATTTTACCCCTTTTCTTTTCTTTTTTGGTTCTGTCATCAAAATTCTTCATCTCGTTTCTTATTTAAACACTTCTTCGTCTTTCCATTCCCTTTAACCTTTAAAACCCATATCCACTTTTTAACTGAAAAAAGATGGGCAGCTTTCAAATTTGGCACAGAAACAGAAACAAACATGTTTCAATTCTCTTGCTGTTCCTCTCTGTTTTCATTCTCATTCTTGTCACATCCATTGAAGGTAAGTCATTGTAAAAGTTGAGCTTTTTTTTTTTTTTTTTTTTAATAGAGATTGTTGAGTTTTTTAGTTGTAAGGATATTGTAGGTAGGGGAATTCAAGCAATGGAGGGAGAAAGGAAGTCAGCAGAGACGGTGGCGGTAGCGACGGAGGAGGAGGAGGAGAAGATGGGGATGATGATGAGGAATCAAATAGGGTCAAGGCCACCAAGCTGTAGAAGGAAGTGTATGGAATGTGGAGGACATTGCGAAGCAGTACAAGTACCAGTGGCATTACATGATTCAAATCAGAATCAAAAAAAAGGAAGAAGAAGAAGAAGAAGTAGTAGGAGATATTTCTCTGATCATTCAAAACATGATGTTGCTTTATCTAGTGAAGATGAGACCTCTAATTATAAGCCTATAAGCTGGAAATGCAAATGTGGAAATTTCATCTTCAACCCTTGAATTTTGATTTTCTTTCATTTCTTCTTCTTTTTTTAATATAAACGGTAACTTGTAAAGATCAAAAAGATGGAAAATCATCACTTCTTCTCTTCCCAAGTTTCATTCTGTTGTGTTTTTACAAATGCTTGAATTTCCGTGTCTTTTGTATTGAGACTCAATCTTATAACTAATTGATAACGAGATTAATAACTG

mRNA sequence

TGGGCACTCACTCAATCTCTGATACTCTTTTTCTTTCATTTTACCCCTTTTCTTTTCTTTTTTGGTTCTGTCATCAAAATTCTTCATCTCGTTTCTTATTTAAACACTTCTTCGTCTTTCCATTCCCTTTAACCTTTAAAACCCATATCCACTTTTTAACTGAAAAAAGATGGGCAGCTTTCAAATTTGGCACAGAAACAGAAACAAACATGTTTCAATTCTCTTGCTGTTCCTCTCTGTTTTCATTCTCATTCTTGTCACATCCATTGAAGGTAGGGGAATTCAAGCAATGGAGGGAGAAAGGAAGTCAGCAGAGACGGTGGCGGTAGCGACGGAGGAGGAGGAGGAGAAGATGGGGATGATGATGAGGAATCAAATAGGGTCAAGGCCACCAAGCTGTAGAAGGAAGTGTATGGAATGTGGAGGACATTGCGAAGCAGTACAAGTACCAGTGGCATTACATGATTCAAATCAGAATCAAAAAAAAGGAAGAAGAAGAAGAAGAAGTAGTAGGAGATATTTCTCTGATCATTCAAAACATGATGTTGCTTTATCTAGTGAAGATGAGACCTCTAATTATAAGCCTATAAGCTGGAAATGCAAATGTGGAAATTTCATCTTCAACCCTTGAATTTTGATTTTCTTTCATTTCTTCTTCTTTTTTTAATATAAACGGTAACTTGTAAAGATCAAAAAGATGGAAAATCATCACTTCTTCTCTTCCCAAGTTTCATTCTGTTGTGTTTTTACAAATGCTTGAATTTCCGTGTCTTTTGTATTGAGACTCAATCTTATAACTAATTGATAACGAGATTAATAACTG

Coding sequence (CDS)

ATGGGCAGCTTTCAAATTTGGCACAGAAACAGAAACAAACATGTTTCAATTCTCTTGCTGTTCCTCTCTGTTTTCATTCTCATTCTTGTCACATCCATTGAAGGTAGGGGAATTCAAGCAATGGAGGGAGAAAGGAAGTCAGCAGAGACGGTGGCGGTAGCGACGGAGGAGGAGGAGGAGAAGATGGGGATGATGATGAGGAATCAAATAGGGTCAAGGCCACCAAGCTGTAGAAGGAAGTGTATGGAATGTGGAGGACATTGCGAAGCAGTACAAGTACCAGTGGCATTACATGATTCAAATCAGAATCAAAAAAAAGGAAGAAGAAGAAGAAGAAGTAGTAGGAGATATTTCTCTGATCATTCAAAACATGATGTTGCTTTATCTAGTGAAGATGAGACCTCTAATTATAAGCCTATAAGCTGGAAATGCAAATGTGGAAATTTCATCTTCAACCCTTGA

Protein sequence

MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEEKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSDHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

Homology

[Close]

BLAST of Cmc03g0081181 vs. NCBI nr
Match: XP_008444980.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60
           MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60

Query: 61  KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSD 120
           KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSD
Sbjct: 61  KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSD 120

Query: 121 HSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           HSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 HSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153

[Close]

BLAST of Cmc03g0081181 vs. NCBI nr
Match: KAA0065061.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 305.4 bits (781), Expect = 2.7e-79
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVAT-EEEE 60
           MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVAT EEEE
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60

Query: 61  EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFS 120
           EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFS
Sbjct: 61  EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFS 120

Query: 121 DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154

[Close]

BLAST of Cmc03g0081181 vs. NCBI nr
Match: XP_004148430.2 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus] >KGN62787.1 hypothetical protein Csa_022255 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 142/153 (92.81%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60
           MGSFQIWHRNRNKH+SILLLFLSVFILILVTSIEGRGIQAMEGERKSAE   VAT EEEE
Sbjct: 1   MGSFQIWHRNRNKHISILLLFLSVFILILVTSIEGRGIQAMEGERKSAE---VAT-EEEE 60

Query: 61  KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSD 120
           KMGMMMRNQIGSRPPSCRRKC ECGGHCEAVQVPVALHDSNQNQ+KGRR+RRSS RYFS 
Sbjct: 61  KMGMMMRNQIGSRPPSCRRKCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRSSSRYFSV 120

Query: 121 HSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 149

[Close]

BLAST of Cmc03g0081181 vs. NCBI nr
Match: XP_038886514.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida])

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48
Identity = 117/157 (74.52%), Postives = 123/157 (78.34%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSI-EGRGIQA--MEGERKSAETVAVATEE 60
           MGSFQ WH  R KHVSI LLFLSV ILI VTSI EGRGIQ     G  +S ET A     
Sbjct: 1   MGSFQNWH--RIKHVSISLLFLSVSILIHVTSIVEGRGIQGSLTTGRSESPETAAA---- 60

Query: 61  EEEKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHD-SNQNQKKGRRRRRSSRR 120
            EEK GMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALHD S+QNQ+K R  R S   
Sbjct: 61  -EEKAGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDLSHQNQRKKRTSRSS--- 120

Query: 121 YFSDHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           +FS +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 HFSVNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 147

[Close]

BLAST of Cmc03g0081181 vs. NCBI nr
Match: XP_022131875.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia] >XP_022131876.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia])

HSP 1 Score: 169.9 bits (429), Expect = 1.8e-38
Identity = 98/157 (62.42%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSI-EGRGIQA--MEGERKSAETVAVATEE 60
           MGS Q WHRN+ +H+SI LL LSV I + V S+ EGRGI    MEG +  A   A +  E
Sbjct: 1   MGSLQNWHRNK-QHISISLLLLSVSIFVDVISMAEGRGIPTPLMEGRKVEA---AGSWPE 60

Query: 61  EEEKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRR-RSSRR 120
             EK+G M+R+QIGSRPPSCRR+C ECGGHCEA+QVPVALHDS QNQ+K R     ++  
Sbjct: 61  LPEKVG-MIRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAA 120

Query: 121 YFSDHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
             +  S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 TSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP 152

[Close]

BLAST of Cmc03g0081181 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.7e-13
Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 22  LSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEEKMGMMMRNQIGSRPPSCRR-K 81
           +S F+LIL+  +       M   R   ++V   T+  ++ + MMMR  IGSRPP C R +
Sbjct: 7   MSSFLLILLI-LNSTHFSLMANGRPEPDSVEF-TKSGDQDVKMMMRGLIGSRPPRCERVR 66

Query: 82  CMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSDHSKHDVALSSEDETSNYKPI 141
           C  C GHCEA+QVP     +N   K       SS    S      +  +  D+++NYKP+
Sbjct: 67  CRSC-GHCEAIQVP-----TNPQTKLHSPLTTSSS---SSSETIHLDYTRGDDSTNYKPM 126

Query: 142 SWKCKCGNFIFNP 154
           SWKCKCGN I+NP
Sbjct: 127 SWKCKCGNSIYNP 128

[Close]

BLAST of Cmc03g0081181 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.0e-04
Identity = 29/85 (34.12%), Postives = 39/85 (45.88%), Query Frame = 0


Query: 69  QIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSDHSKHDVAL 128
           ++GS PPSC  +C  C   C A+QVP         + +  R    S  +    S     L
Sbjct: 47  RLGSTPPSCHNRCNNC-HPCMAIQVPTL-----PTRSRFTRVNPFSGGFVRPPSSLTTVL 106

Query: 129 SSEDETSNYKPISWKCKCGNFIFNP 154
              D+ SNYKP+ WKC C    +NP
Sbjct: 107 ---DQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Cmc03g0081181 vs. ExPASy TrEMBL
Match: A0A1S3BBM2 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103488159 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.3e-81
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60
           MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60

Query: 61  KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSD 120
           KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSD
Sbjct: 61  KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSD 120

Query: 121 HSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           HSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 HSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153

[Close]

BLAST of Cmc03g0081181 vs. ExPASy TrEMBL
Match: A0A5A7VH43 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003900 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.3e-79
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVAT-EEEE 60
           MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVAT EEEE
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60

Query: 61  EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFS 120
           EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFS
Sbjct: 61  EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFS 120

Query: 121 DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154

[Close]

BLAST of Cmc03g0081181 vs. ExPASy TrEMBL
Match: A0A0A0LPQ0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G372820 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.8e-72
Identity = 142/153 (92.81%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60
           MGSFQIWHRNRNKH+SILLLFLSVFILILVTSIEGRGIQAMEGERKSAE   VAT EEEE
Sbjct: 1   MGSFQIWHRNRNKHISILLLFLSVFILILVTSIEGRGIQAMEGERKSAE---VAT-EEEE 60

Query: 61  KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSD 120
           KMGMMMRNQIGSRPPSCRRKC ECGGHCEAVQVPVALHDSNQNQ+KGRR+RRSS RYFS 
Sbjct: 61  KMGMMMRNQIGSRPPSCRRKCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRSSSRYFSV 120

Query: 121 HSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 149

[Close]

BLAST of Cmc03g0081181 vs. ExPASy TrEMBL
Match: A0A6J1BQW9 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111004910 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 8.5e-39
Identity = 98/157 (62.42%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSI-EGRGIQA--MEGERKSAETVAVATEE 60
           MGS Q WHRN+ +H+SI LL LSV I + V S+ EGRGI    MEG +  A   A +  E
Sbjct: 1   MGSLQNWHRNK-QHISISLLLLSVSIFVDVISMAEGRGIPTPLMEGRKVEA---AGSWPE 60

Query: 61  EEEKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRR-RSSRR 120
             EK+G M+R+QIGSRPPSCRR+C ECGGHCEA+QVPVALHDS QNQ+K R     ++  
Sbjct: 61  LPEKVG-MIRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAA 120

Query: 121 YFSDHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
             +  S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 TSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP 152

[Close]

BLAST of Cmc03g0081181 vs. ExPASy TrEMBL
Match: A0A6J1GIN2 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454528 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.2e-38
Identity = 101/164 (61.59%), Postives = 117/164 (71.34%), Query Frame = 0


Query: 1   MGSFQIWHRNRNKHVSI-LLLFLSVFILILVTSI-EGRGIQA-MEGERKSAETVAVATEE 60
           MGS QIWH  RNKH+SI  L FLSVF+ I +TSI EGRG Q  +  +RK  E  + A   
Sbjct: 1   MGSLQIWH--RNKHLSIPFLFFLSVFLFIHLTSIAEGRGFQTPLMEDRKVEEQPSTA--- 60

Query: 61  EEEKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRY 120
             E + M  R+QIGS+PPSCRR+C ECGG CEA+QVPVA+HDS  +QK+ RR RR  R +
Sbjct: 61  --ELVRMRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDST-HQKQRRRTRRRIRSH 120

Query: 121 FSDH-------SKHD-VALSSEDETSNYKPISWKCKCGNFIFNP 154
           FS         SKH+ VALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 FSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP 156

[Close]

BLAST of Cmc03g0081181 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 5.5e-14
Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 22  LSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEEKMGMMMRNQIGSRPPSCRR-K 81
           +S F+LIL+  +       M   R   ++V   T+  ++ + MMMR  IGSRPP C R +
Sbjct: 7   MSSFLLILLI-LNSTHFSLMANGRPEPDSVEF-TKSGDQDVKMMMRGLIGSRPPRCERVR 66

Query: 82  CMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSDHSKHDVALSSEDETSNYKPI 141
           C  C GHCEA+QVP     +N   K       SS    S      +  +  D+++NYKP+
Sbjct: 67  CRSC-GHCEAIQVP-----TNPQTKLHSPLTTSSS---SSSETIHLDYTRGDDSTNYKPM 126

Query: 142 SWKCKCGNFIFNP 154
           SWKCKCGN I+NP
Sbjct: 127 SWKCKCGNSIYNP 128

[Close]

BLAST of Cmc03g0081181 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 7.2e-06
Identity = 29/85 (34.12%), Postives = 39/85 (45.88%), Query Frame = 0


Query: 69  QIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFSDHSKHDVAL 128
           ++GS PPSC  +C  C   C A+QVP         + +  R    S  +    S     L
Sbjct: 47  RLGSTPPSCHNRCNNC-HPCMAIQVPTL-----PTRSRFTRVNPFSGGFVRPPSSLTTVL 106

Query: 129 SSEDETSNYKPISWKCKCGNFIFNP 154
              D+ SNYKP+ WKC C    +NP
Sbjct: 107 ---DQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Cmc03g0081181 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 41.6 bits (96), Expect = 6.7e-04
Identity = 32/109 (29.36%), Postives = 44/109 (40.37%), Query Frame = 0


Query: 38  IQAMEGERKSAETVAVATEEEEEKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVAL 97
           I+    E  S   +    E +EE   +  R +IGS+PPSC +KC  C   CEA+Q P   
Sbjct: 27  IKPQAAEENSRRRILNPNENKEEI--VKRRRRIGSKPPSCEKKCYGC-EPCEAIQFPTI- 86

Query: 98  HDSNQNQKKGRRRRRSSRRYFSDHSKHDVALSSEDETSNYKPISWKCKC 147
                          SS  + S H             +NY+P  W+C C
Sbjct: 87  ---------------SSIPHLSPH------------YANYQPEGWRCHC 104

The following BLAST results are available for this feature:

BLAST of Cmc03g0081181 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444980.1	1.1e-80	100.00	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo]	[more]
KAA0065061.1	2.7e-79	99.35	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa]	[more]
XP_004148430.2	1.2e-71	92.81	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus] >KGN62787.1 hypothe...	[more]
XP_038886514.1	1.1e-48	74.52	EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida]	[more]
XP_022131875.1	1.8e-38	62.42	EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia] >XP_022131876.1...	[more]

BLAST of Cmc03g0081181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T068	7.7e-13	39.10	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	1.0e-04	34.12	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Cmc03g0081181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBM2	5.3e-81	100.00	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103488159...	[more]
A0A5A7VH43	1.3e-79	99.35	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0LPQ0	5.8e-72	92.81	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G372...	[more]
A0A6J1BQW9	8.5e-39	62.42	Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1GIN2	4.2e-38	61.59	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Cmc03g0081181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37810.1	5.5e-14	39.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G10310.1	7.2e-06	34.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13898.1	6.7e-04	29.36	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..58
None	No IPR available	PFAM	PF17181	EPF	coord: 69..153 e-value: 3.9E-18 score: 65.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..132
None	No IPR available	PANTHER	PTHR33109:SF68	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2	coord: 6..153
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 6..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0081181.1	Cmc03g0081181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region