Cmc03g0080721 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0080721
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	two-on-two hemoglobin-3
Location	CMiso1.1chr03: 26444218 .. 26446761 (+)
RNA-Seq Expression	Cmc03g0080721
Synteny	Cmc03g0080721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGTGTCTCTGTTCAGGACCTCATCCCGAAGAAATGTAGAGAGAGAGATAGCTATTTTTCTCCTTATCAATTGTTCTTGAGGTAGAAACTCTTGTTATCTAAGTAAATCCCAAATAGACATTCCGTTCAAAAACAAAAATTGAGTATTGATTTGAGAACGAGAACCCAAGAAAGACATGTTATGAATTCCACATCGAAAAAATTAAGGTACCTTACAACTCAACTACTCCTCTAGTTATCAATTGGTTTTGAGTGACAACCCCATGTTATCTAATAGTCTTCCACAAAAATGTTGTTTATTATCTTTTGGTTTATTTATTTTGTATTTCTAAAAATCAAGCTTCTAAAAACTACTTAGAACTTTGCTTCAAACTAAAATAATATTTTAACTTTTTTGTTTTTTGAAAATCGATAAGAATTTACAAGTCTCAAATGTTCTGGTAAGAAAAATGAAAATCATATAAGAAAACAGAGAACACACATAAATTTCAAAAGCAAAAAAATTAAAACAAAATCGAACGTGTCTACCTTCTCAATCTTTTCGTTATATTCTGATTCGTCATGAGTTTGGATAGTTAATCAGTTTGATCTATGAGACTGTAGAACGAATGAAATAAGAGATGGAACACCGTTTTACAGGTTATGAATCTTGACCTCCTACAAACTTAGCAACGAATATAGTATCATTTTTTGTTGTAATTGAGCACCAGCAGTGTTCTTCATGGCTTATTAAGTGACATACGCAAAACAGTATTATGATCGTGATTCCTGTTTGATCCCTTAATATTTATTTATGAGAGTCTGTCGAACCCTCATATGAGTTGAGGCAATCAATGAATCATGCCTTCAACATGTTCTAAACTCTTTACCCACAATTTATCGTTGAGACCTCAATATGGGCCTTTTGCCATCCATTGTTGATGCATTAGCATAAGAAATTTGGTTGTCTTGCAAGTATGTGAGCAGTCTGCAGTTTGGTTAGTTTAAGGATGAAAAACAACGTATTAAATGATGAAAGATATGCTCGTACTTTTCTGATGTTTAAAAACACTTTTGATAGGTTCAAAATAGTTCTTTCCAGTCATCTTGGTTTGATAATAACATAAAATTATCATCATTAGTAAAAACAAACGATATTTAAATACTTGTGTAGCGTATAGTGCTTGTGTCTTAGTGCAATGTTAAAGTGATTTACTATCAAGCAATTTTTATAATGATGCATATAATTCAAGTACTTTTGTCAAAAGAGAAAAGAAGGGAAAAAAATAAAAATAAAAAGAGCTGTGTACTGTGGGTTACTCGTGAACATACCCCATCAGCCCAATGGTGATTTAACAATTTGTCAAGTCTCTGATGACTGGTAGAGTGCAACTTTACGAGTACATGAAAAGGTAATCTATTTGCAGCATGATTGTTATGATCCTTACAAAAATTGGTGTCATTTCAGGTCATCCAGCTCTTATAGGTCGACATCGACCATTCCCAGTAACGCATAGAGCAGCAGAGAGATGGTTACATCACATGCAACTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGATAAATTTTTTCAGGCATGTATTCTTCTCTTGTTTTGTTCCTTCTACCCTCATTCATAGACGTCTACGGCTTTTTGTTTATACATACGTATATACTATAAGCAACCACAATTCCATTGAAAACAAAACAGAAAGAATACAAGGATGTCCAAATAAGCAAACTCCTAAAAAGATCCAAACTAAAACACAAAAAATCTTGTACACCAAAAAATGATAAATGAAATTTAACTAGGGGTCATACCTCTTTGAGGACCTCTCAGTCTATCTAAAAATTATATGGTTTCTCTCAAGTCAAGTCCCCTATGAAACGACACAGAATCTCGTATACGTTTATCTCGAAAAAGGCAAATGGGGAAGAAACTCTTCTGCCATTAAGCTACCAATGAACTACACTCTTTCTTTCTCGTGTCTTGAGTTTCCATTATTAGGTATGCTTGTTTTCTGGTTGTATGCAGACACACAGCTTTCTTTCTAGTGGCTGGAGATGAGATGAAGAATCAAAACCTACAAACTCAATGCAAGCATGGTATCCAGCAATCTGCTGCGCCGTAGACATTCTAGAACAGAAACATAGCTTACACACAAACAAATAATTATGAAGCAGAAGATTGTTGGATCTAGGTGATTCTTCGTGTATTTCCATGTCCGACTGACCTTTAATCTTTATAACGAAGGGAGGTATCTCCTCAATTTGACTTGAAATGAAGGCAGCTTATTTTCAAATGGTTAATTCAAACCATTTTGTAATATGATGCAATTATATATTTCATTTAGGTGCCTTTGGTTGAAATTCAATTGTGTTAGGTTTTTGTTCTTTTACTCAAACATGTGATTGTCTATTAGGATTTACTTCCTATGTGTTTATTTACTTCATTTTTAAAAGTCAACGAATACCGTCTAAATTGTTTAAAAGTCAGTATGGCAATGTCCGTTAAAATTATGGCAAATTACAAAAGTTCTGATGTT

mRNA sequence

GCCGTGTCTCTGTTCAGGACCTCATCCCGAAGAAATGTAGAGAGAGAGATAGCTATTTTTCTCCTTATCAATTGTTCTTGAGGTAGAAACTCTTGTTATCTAAGTAAATCCCAAATAGACATTCCGTTCAAAAACAAAAATTGAGTATTGATTTGAGAACGAGAACCCAAGAAAGACATGTTATGAATTCCACATCGAAAAAATTAAGGTCATCCAGCTCTTATAGGTCGACATCGACCATTCCCAGTAACGCATAGAGCAGCAGAGAGATGGTTACATCACATGCAACTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGATAAATTTTTTCAGACACACAGCTTTCTTTCTAGTGGCTGGAGATGAGATGAAGAATCAAAACCTACAAACTCAATGCAAGCATGGTATCCAGCAATCTGCTGCGCCGTAGACATTCTAGAACAGAAACATAGCTTACACACAAACAAATAATTATGAAGCAGAAGATTGTTGGATCTAGGTGATTCTTCGTGTATTTCCATGTCCGACTGACCTTTAATCTTTATAACGAAGGGAGGTATCTCCTCAATTTGACTTGAAATGAAGGCAGCTTATTTTCAAATGGTTAATTCAAACCATTTTGTAATATGATGCAATTATATATTTCATTTAGGTGCCTTTGGTTGAAATTCAATTGTGTTAGGTTTTTGTTCTTTTACTCAAACATGTGATTGTCTATTAGGATTTACTTCCTATGTGTTTATTTACTTCATTTTTAAAAGTCAACGAATACCGTCTAAATTGTTTAAAAGTCAGTATGGCAATGTCCGTTAAAATTATGGCAAATTACAAAAGTTCTGATGTT

Coding sequence (CDS)

ATGCAACTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGATAAATTTTTTCAGACACACAGCTTTCTTTCTAGTGGCTGGAGATGAGATGAAGAATCAAAACCTACAAACTCAATGCAAGCATGGTATCCAGCAATCTGCTGCGCCGTAG

Protein sequence

MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP

Homology

[Close]

BLAST of Cmc03g0080721 vs. NCBI nr
Match: KAA0065023.1 (two-on-two hemoglobin-3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP
Sbjct: 115 MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Cmc03g0080721 vs. NCBI nr
Match: XP_008445043.1 (PREDICTED: two-on-two hemoglobin-3 isoform X2 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP
Sbjct: 115 MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Cmc03g0080721 vs. NCBI nr
Match: XP_022996482.1 (two-on-two hemoglobin-3 [Cucurbita maxima])

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSKVRM NFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQ AAP
Sbjct: 115 MQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQPAAP 169

[Close]

BLAST of Cmc03g0080721 vs. NCBI nr
Match: XP_004138784.1 (two-on-two hemoglobin-3 [Cucumis sativus] >KGN62837.1 hypothetical protein Csa_022410 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 4.5e-21
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSK RMI FFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP
Sbjct: 115 MQLALDETPDIDADSKDRMIKFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Cmc03g0080721 vs. NCBI nr
Match: XP_022131302.1 (two-on-two hemoglobin-3 [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 7.7e-21
Identity = 52/55 (94.55%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSKVRM NFFRHTAFFLVAGDEMKNQ LQTQCKHGIQQ AAP
Sbjct: 115 MQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQGLQTQCKHGIQQQAAP 169

[Close]

BLAST of Cmc03g0080721 vs. ExPASy Swiss-Prot
Match: Q67XG0 (Two-on-two hemoglobin-3 OS=Arabidopsis thaliana OX=3702 GN=GLB3 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.0e-11
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQN------LQTQCKHGIQQSA 54
           MQ ALD++ DID DSK++M+ FFRHTAFFLVAG+E+KNQN       Q  CKH   + A
Sbjct: 115 MQNALDDSVDIDQDSKIKMMKFFRHTAFFLVAGNELKNQNEKPKHKPQCACKHAANKPA 173

[Close]

BLAST of Cmc03g0080721 vs. ExPASy TrEMBL
Match: A0A5A7VA21 (Two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003480 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP
Sbjct: 115 MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Cmc03g0080721 vs. ExPASy TrEMBL
Match: A0A1S3BCI0 (two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488203 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP
Sbjct: 115 MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Cmc03g0080721 vs. ExPASy TrEMBL
Match: A0A6J1K220 (two-on-two hemoglobin-3 OS=Cucurbita maxima OX=3661 GN=LOC111491717 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.9e-22
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSKVRM NFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQ AAP
Sbjct: 115 MQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQPAAP 169

[Close]

BLAST of Cmc03g0080721 vs. ExPASy TrEMBL
Match: A0A0A0LPU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375770 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSK RMI FFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP
Sbjct: 115 MQLALDETPDIDADSKDRMIKFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 169

[Close]

BLAST of Cmc03g0080721 vs. ExPASy TrEMBL
Match: A0A6J1BQM7 (two-on-two hemoglobin-3 OS=Momordica charantia OX=3673 GN=LOC111004565 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21
Identity = 52/55 (94.55%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQNLQTQCKHGIQQSAAP 56
           MQLALDETPDIDADSKVRM NFFRHTAFFLVAGDEMKNQ LQTQCKHGIQQ AAP
Sbjct: 115 MQLALDETPDIDADSKVRMTNFFRHTAFFLVAGDEMKNQGLQTQCKHGIQQQAAP 169

[Close]

BLAST of Cmc03g0080721 vs. TAIR 10
Match: AT4G32690.1 (hemoglobin 3 )

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-12
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 1   MQLALDETPDIDADSKVRMINFFRHTAFFLVAGDEMKNQN------LQTQCKHGIQQSA 54
           MQ ALD++ DID DSK++M+ FFRHTAFFLVAG+E+KNQN       Q  CKH   + A
Sbjct: 115 MQNALDDSVDIDQDSKIKMMKFFRHTAFFLVAGNELKNQNEKPKHKPQCACKHAANKPA 173

The following BLAST results are available for this feature:

BLAST of Cmc03g0080721 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065023.1	1.4e-22	100.00	two-on-two hemoglobin-3 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_008445043.1	1.4e-22	100.00	PREDICTED: two-on-two hemoglobin-3 isoform X2 [Cucumis melo]	[more]
XP_022996482.1	2.0e-21	96.36	two-on-two hemoglobin-3 [Cucurbita maxima]	[more]
XP_004138784.1	4.5e-21	96.36	two-on-two hemoglobin-3 [Cucumis sativus] >KGN62837.1 hypothetical protein Csa_0...	[more]
XP_022131302.1	7.7e-21	94.55	two-on-two hemoglobin-3 [Momordica charantia]	[more]

BLAST of Cmc03g0080721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XG0	2.0e-11	57.63	Two-on-two hemoglobin-3 OS=Arabidopsis thaliana OX=3702 GN=GLB3 PE=1 SV=1	[more]

BLAST of Cmc03g0080721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VA21	6.8e-23	100.00	Two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BCI0	6.8e-23	100.00	two-on-two hemoglobin-3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488203 PE=4 ...	[more]
A0A6J1K220	9.9e-22	96.36	two-on-two hemoglobin-3 OS=Cucurbita maxima OX=3661 GN=LOC111491717 PE=4 SV=1	[more]
A0A0A0LPU3	2.2e-21	96.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375770 PE=4 SV=1	[more]
A0A6J1BQM7	3.7e-21	94.55	two-on-two hemoglobin-3 OS=Momordica charantia OX=3673 GN=LOC111004565 PE=4 SV=1	[more]

BLAST of Cmc03g0080721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32690.1	1.4e-12	57.63	hemoglobin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012292	Globin/Protoglobin	GENE3D	1.10.490.10	Globins	coord: 1..37 e-value: 3.3E-7 score: 32.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0080721.1	Cmc03g0080721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015671	oxygen transport
molecular_function	GO:0020037	heme binding
molecular_function	GO:0019825	oxygen binding
molecular_function	GO:0005344	oxygen carrier activity