Cmc03g0080261 (gene) Melon (Charmono) v1.1

Overview
NameCmc03g0080261
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionselenoprotein H
LocationCMiso1.1chr03: 26197970 .. 26203141 (+)
RNA-Seq ExpressionCmc03g0080261
SyntenyCmc03g0080261
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAAGAAAAATAAAAAGAGACGACGTGACAATAAATGATAGTGGAGACTGGCGCCATTTCTGGGACTTCGTGCCGCCACTTTCTTCCAAAGAAGAAACCAAGTGGAACTGCGTGGGCGTCGTACGACCACCCAGTCAACGGCCTCGATCCATTCCCACACTCAAAATCCATCTCCACCGTTTCTTCAAATTCCCACCGCCGTCCCATAGCGCGGGAAAACCCCCCCAACTCCGCTTCTGTAAATCACTACAAACCAACGGTCACACCTTCGAAACCACCCATAACTTTACCTTCTTCCTCATACGACCTCCTTTTCTTTTCCTTTCTAGGGTTTCATTTCTCCTATTATGGCGCCTAGGAAGCGAAGCAAGAACCAAGAAGAAGAGTCGGCGATGGAGAAGCCGGCCCCGGCGACGTCCAGGGTGACTCGGAGTTCCGCTCGGCTGGCGGCGAACTCCAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAAGTCGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATGTTGGTTTGGAGAAACCTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGGTGAGTTTTTCCTTTTCCGTTTGTTGTTTGTAATTGAGAATATGTTGGTTAATTTGAAGATGAACTTTCGAGGGTTTGGGATGCTTGCTTGCTTGCTTTCTAGTTTTGTCTTCGTCGAATTTGTTGGTTCCTTTTGTGAGCTTTTTTGTTAGGTTAAACTTTTTTCGCTTGAAACGTGGGTTCATTTCTAGGGTTTCGTAGAATAAAAGTTTTGACTTTCTTTCTTGAAACGTGGATTCATTTCTAGCCTGCGCCTCTCATGGCTTCTTCTCCTTCCTTCTTCTACCACTGCCATTTTCTCTCCTCATCTCGGGGTTCGCCCATCTTTTCAGCTTTCTCCATGAAATTTTACATATTAACATCGAGTTTACCTGCCGCTTTTGATGCATTCTGTTGGCGGAATTTTTAATTGCTCACAATTTTGGGAATTTAATTTTTGTTAGCTTATTGGACACCGTATATCCGAAACATGCGTACTTTCTAATTCAGGGCATTGCTAGAGATTTTGGTTTGAAGAAAGCCAACTTTCAATATAAATAATCTTTGAACTTTAATAATCAGAGGCGAATTAGGGGGGAAAAACATTATTTTCTTTTGTTCTATGAAAACCTAAGTCAGAGTAAGGGACCATTTCTTTTTTATTCTTGGCTTCGCCTTTGCTTTTTGCAATGTATCATCTAATGAATGGAAAAGGAAAAAGGATAATACAATCGGGGCGTTTCATGGTTGTGAAAATCCCTATAATATGGATGCTTCTGCCTATCTCATGTCATGTGCGGCGTTTGTCTTATGACACTTTTCCCCATATTTTTGTTCCCTTGTAGCAAACAGTGTCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCCGATAAGGTATTTTTCTGACATCGTCAACTTTTACGTCCTATTCTTCATAAAAAGGATCAATTTGAGTTCATTTTGTTATCCTAGCAAAATTTTAATTTAATACACATGATACTGGTCTGTTGATTTGATCGTCCTTTGAATTTGTTCTTCATTTTTCTTCCATTTTGTGGAATGTGGAGGTTTTGGTTACCAAGCATTTCTACTTTGAACAACCAGAAAATGCATTATTTGTTCATTTTAAGCCTATAAGTTCGCTGCTGGGCTGGAGTCACAGTGGGACTTGGAAACGCCTTATGGGTCTTATTTATAAGCCTAGACATGATCCTAGTATTATTTTTTTATTACTTACAATTCAATTTTTGCTGTCAAAGAGTTGTTTGTCTTTGTTTTTATGGTGTTTTGATGTCCAAAAGAAGGAAAGCTTGAGTTTGAATTATTGAGAATTGGGTCTTCAGTTGATTCACAAGTTAACTTATAGATAGATTTTGTGTCATGAGCAGTGAAGCAGTTAGAATTCTCATTTGATAGTCAAGGAAGATCTTTTAGTTCTGTTTTTTTTTTGTTGGTAAGCATCAAAGCTAATCTCCATATTCCATCCGAAGTATAATATGTCAGGGACTAGTTCGAACTCCTTGTTGACCATTTATCTCTCTATGTAGTTTGAGAATGCAACCAAAGTATCACATTGATTATGGGTAAATAACTAGGTGACATCTCCATTAGTAAGAGGCTTTTTGGCAGTATTGGTTTTGTTGCTTTGCTGAAGAGGAGTTAACTTGATTAAAGGTGATTGTTAGAGAGTAAACATGATTAAAGGTGATTGTTAGAGAGTAAACCCAAACGAACGAATATTTGAAAGGAGGCTTGGTGGTTCTTTCGAGCGGTGAACTGTCGGGCATGTGACCAAAGTCTTACACTAACTAGAAAAGGAGGAGATCATGGGTACATGAGTGAGTGACAGGATCTCTGGTCTCCACCACTGTATGAAATCTTTTGGGTGATCCTGAAAACAAAACTGCGAGAGCTTATGTCCATAGTGAACAATATCCTACTGTGGGGATATGTCGGTGGGATATTTTGATCCTGGGAGTTTCTTGAGATAATCGCTTCTTATATTTATATTTTATTACCTGATTGGATTTTGGTATTTTTCTATTTTATTTTAAGAAACTGCTACATATCAGTGAAAATTTTATTCAGAAAATTGATTACTGAAAACTAAATAGTTGATATGTCTATTTGATGAAATCATTTTTCCACAATTTTAACTACCTTACTTGAGCAAGATCTCTTCTATAGGTTGTACAACTATGTCCTTGAGTTTTAAATATTATTTTATTTTTCTTACTATGCAGCCAAGAAGGGGTTGCTTTGAGATCCGAAGCGAAGATGGCAAGAAATTTATCAGTCTTCTGGTAATTATTACCTTTAACTTCAATTATAAAAAAATTATTTCCGGTTATAAGACATTTGTCGAGTATTCAAGTTCAACGATTTAGGATCTATTTACTGATAGGCAAGCACATCTTTACTCTTTAGTTAAATTTTGATCGGTTTTTAGACCATGTAATCTTCACTGCTATATCTTGTTGTAAATTGTCAAAATTATTCCATTCTTGTAGTTTTGATTCTCTTTTGACTAATTATAGATGTCTTTTGTAACTCCTTTGGTTTAGGGTTTTCCCTTCTTCTTTTGCTCGTACATCAATGGAACTGTTTCGTACAATAAAAGAGTTAAAAGAAAAATGTTCTCCTTTTTGGTGTTAAAATTTAGTTGTTTTTAATGATTTATATAGCTGTTCTTTTTTTGTTCATCTTGGTCTGTATTATTTTTCCTAATTATTATATTTTTTATCTAGGCTTGCTCTGTTTTTTACTAGCCAATTGGAGTAGTTTTTCCTAACTCATAGGTCCTTTTGAGTTATATCCAAGCTTTCTTCTTTACGTTAATCCTTCAATTTAGTTATACTTGTGTTCCCCATAAAATTTCCCTCGATTCATTTTGTTGACCAGTGTTAATAAATTTCTATTTCTAGTTCAACGAAGTTACATGATTAAATGAGTTTACCAAGTATTTTACATATGTTATTTCTTGGTGAAATATGAAATTGTTGGCTACTAAAAACTGATCTATACTTGCTAGATCATGCAATGCTTAGATTTTTGTTTGATATTCCAAGTAGTATAAATACTTAGTACTATTACATTTATTTTTGGAATAACAACTAAATTAATACTGATAATTTATTTTTTTTAGTATTACATTAACAAGTGAGAGTGATGATCTGAACCTTCAACTTCGACACAAATAGTTGATGTCCTTCAACTGGATATTGGCCTGAAATTTGGATTTTAAAACTTTACCATACCAATTGCAGAATTGGATAGATGTATAGGTGTAAGGCTTCCTCGATTTGATGCCCTTAGGTTGATTCTTGTCATTCGTTCTAAACTCTTCTTTGAGTTAGCCCTCTTCCCTCTTTAAGACAATGATCTCTTTTCTTTGTTTTAGATCAAGAACAATTGTCTTGCACTAGTGGCACCTAGAGGTCCATATCTGAATTCCGTTTTTTGTATTCCTCTTTTTTTATTATTATTTGTTTAATGTGCCTATGATTATATGCTACTTTTTACACCAAAGAGATTCCTCGACCTTTGTACATCTTTTGATTATGAGTTTGTAATCTGTCAAGCCATCTAGTTTTGCTATTTAATCATAAGGTGACTCATAACTTTTTTGCAACTATGCGCTTAAAATGATTGATAAAGCTTTCATATAACATTTTACATTTCATTTATAGGACATGAAGCGTCCATTTACCCGCATGAAGGAACTGGACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGATGAAAGGCTTTGATGAAAAATTTGCTTTTCTAAGGATGCAATGGTTTTTTTTGTGGTGGTTTGAAGCTAACCAACTAGAGTAGCTTTGATGGTGGAAAACTCGCTAATGATCATTTGCCAATGTCAATATTGTCTCCTCACTTGAGATAACTGCAATGGTAAAGCCATCAGGTTTGAACAAACATGGTGAAATATTTTTTTGGTTTAAGCTTCATAATGAACGAGTCTATCTTTGAAGAAGGCTTGTCCTTTGTATTAGTAGTAGTAGAAACCTACCCTTACCTAATAGGAGGGTGGCTCTATATTGCATCCTTGAATTGTGTATTTTTGTGTGAATCAATGGAGTTTTATTTGCACCTTTCTTTTTCTTACAAGAGTTCTAAGCCAGAAAACTAGGGGAGATTCCTTTGGCCCAACTATGTCCCTAGGCAAGATAAGGATTAGAGATGAGCATTGGTCAGTCAGCATTCGTTCTATGCTCAAATTGTTGCTGAACGTCAATTTGTTGATTTTGTAAGTCGTGGTTGTTGATTTTGAGAGAATCTATTGAACCGACTGGTCGACTACATGGATGGTTGGTCAGTTGGTTTTAGTTAGTTGTTTATGGAACGAAACTTTGTCGGAGCTGAGAAGAAAATGGTGGTGTTGGCCTCCAATAAGGAGATGATTGGGGCACTTGAAGAAAAAATTTAATCAATTAATTAATTCAAATAGGTATTTATTACCTATCAAAATCTTGTTTTTGA

mRNA sequence

GAGAAGAAAAATAAAAAGAGACGACGTGACAATAAATGATAGTGGAGACTGGCGCCATTTCTGGGACTTCGTGCCGCCACTTTCTTCCAAAGAAGAAACCAAGTGGAACTGCGTGGGCGTCGTACGACCACCCAGTCAACGGCCTCGATCCATTCCCACACTCAAAATCCATCTCCACCGTTTCTTCAAATTCCCACCGCCGTCCCATAGCGCGGGAAAACCCCCCCAACTCCGCTTCTGTAAATCACTACAAACCAACGGTCACACCTTCGAAACCACCCATAACTTTACCTTCTTCCTCATACGACCTCCTTTTCTTTTCCTTTCTAGGGTTTCATTTCTCCTATTATGGCGCCTAGGAAGCGAAGCAAGAACCAAGAAGAAGAGTCGGCGATGGAGAAGCCGGCCCCGGCGACGTCCAGGGTGACTCGGAGTTCCGCTCGGCTGGCGGCGAACTCCAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAAGTCGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATGTTGGTTTGGAGAAACCTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGCAAACAGTGTCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCCGATAAGCCAAGAAGGGGTTGCTTTGAGATCCGAAGCGAAGATGGCAAGAAATTTATCAGTCTTCTGGACATGAAGCGTCCATTTACCCGCATGAAGGAACTGGACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGATGAAAGGCTTTGATGAAAAATTTGCTTTTCTAAGGATGCAATGGTTTTTTTTGTGGTGGTTTGAAGCTAACCAACTAGAGTAGCTTTGATGGTGGAAAACTCGCTAATGATCATTTGCCAATGTCAATATTGTCTCCTCACTTGAGATAACTGCAATGGTAAAGCCATCAGGTTTGAACAAACATGGTGAAATATTTTTTTGGTTTAAGCTTCATAATGAACGAGTCTATCTTTGAAGAAGGCTTGTCCTTTGTATTAGTAGTAGTAGAAACCTACCCTTACCTAATAGGAGGGTGGCTCTATATTGCATCCTTGAATTGTGTATTTTTGTGTGAATCAATGGAGTTTTATTTGCACCTTTCTTTTTCTTACAAGAGTTCTAAGCCAGAAAACTAGGGGAGATTCCTTTGGCCCAACTATGTCCCTAGGCAAGATAAGGATTAGAGATGAGCATTGGTCAGTCAGCATTCGTTCTATGCTCAAATTGTTGCTGAACGTCAATTTGTTGATTTTGTAAGTCGTGGTTGTTGATTTTGAGAGAATCTATTGAACCGACTGGTCGACTACATGGATGGTTGGTCAGTTGGTTTTAGTTAGTTGTTTATGGAACGAAACTTTGTCGGAGCTGAGAAGAAAATGGTGGTGTTGGCCTCCAATAAGGAGATGATTGGGGCACTTGAAGAAAAAATTTAATCAATTAATTAATTCAAATAGGTATTTATTACCTATCAAAATCTTGTTTTTGA

Coding sequence (CDS)

ATGGCGCCTAGGAAGCGAAGCAAGAACCAAGAAGAAGAGTCGGCGATGGAGAAGCCGGCCCCGGCGACGTCCAGGGTGACTCGGAGTTCCGCTCGGCTGGCGGCGAACTCCAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAAGTCGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATGTTGGTTTGGAGAAACCTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGCAAACAGTGTCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCCGATAAGCCAAGAAGGGGTTGCTTTGAGATCCGAAGCGAAGATGGCAAGAAATTTATCAGTCTTCTGGACATGAAGCGTCCATTTACCCGCATGAAGGAACTGGACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGA

Protein sequence

MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
Homology
[Close]
BLAST of Cmc03g0080261 vs. NCBI nr
Match: XP_008445096.1 (PREDICTED: selenoprotein H [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 3.7e-85
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG
Sbjct: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60

Query: 61  KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120
           KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL
Sbjct: 61  KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120

Query: 121 LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
Sbjct: 121 LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 172

[Close]
BLAST of Cmc03g0080261 vs. NCBI nr
Match: XP_004138763.1 (selenoprotein H [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 1.8e-79
Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENG
Sbjct: 1   MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60

Query: 61  KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120
           KVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL
Sbjct: 61  KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120

Query: 121 LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           LNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Sbjct: 121 LNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 172

[Close]
BLAST of Cmc03g0080261 vs. NCBI nr
Match: KAE8652181.1 (hypothetical protein Csa_022241 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 1.8e-79
Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENG
Sbjct: 77  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 136

Query: 61  KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120
           KVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL
Sbjct: 137 KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 196

Query: 121 LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           LNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Sbjct: 197 LNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 248

[Close]
BLAST of Cmc03g0080261 vs. NCBI nr
Match: XP_038886764.1 (selenoprotein H [Benincasa hispida])

HSP 1 Score: 273.1 bits (697), Expect = 1.7e-69
Identity = 149/176 (84.66%), Postives = 158/176 (89.77%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADL----TVTELPKSKKAKRAP 60
           MAPRKRSKNQE+E A EK APA+SRVTRSSARLAANSKAD      VTE  KSKKAKRAP
Sbjct: 1   MAPRKRSKNQEDEPAAEKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAKRAP 60

Query: 61  KENGKVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPG 120
           KENGKV+EVEN+ V+VD  LEK DKD K+RTVVIEHCKQCQSFKKRAIQVQ GLENGVPG
Sbjct: 61  KENGKVKEVENEGVEVDAALEKLDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPG 120

Query: 121 ITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           ITV+LNPD PRRGCFEIRSEDG+KFISLLDMKRPFTRMKELDM+EVISDIIEKIKG
Sbjct: 121 ITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 176

[Close]
BLAST of Cmc03g0080261 vs. NCBI nr
Match: XP_023536837.1 (selenoprotein H-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.0 bits (650), Expect = 4.7e-64
Identity = 139/176 (78.98%), Postives = 150/176 (85.23%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAP 60
           MAP+KRSK QE+E+A  KP PA+SR TR S RLAANSKADLTV E    LPK KKAKRAP
Sbjct: 1   MAPKKRSKIQEDETAAAKPVPASSRATRRSPRLAANSKADLTVEEPVVKLPKRKKAKRAP 60

Query: 61  KENGKVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPG 120
           KENGK EEVEN+   +D   EK   +AK+R VVIEHCKQCQSFKKRAI+VQ GLE GVPG
Sbjct: 61  KENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQCQSFKKRAIEVQNGLEKGVPG 120

Query: 121 ITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           ITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKELDM+EVISDIIEKIKG
Sbjct: 121 ITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 176

[Close]
BLAST of Cmc03g0080261 vs. ExPASy Swiss-Prot
Match: Q3UQA7 (Selenoprotein H OS=Mus musculus OX=10090 GN=Selenoh PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06
Identity = 30/94 (31.91%), Postives = 52/94 (55.32%), Query Frame = 0 

Query: 76  LEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI-- 135
           ++K +K A+  TVVIEHC   + + + A  +   L+   P + V +NP KPRRG FE+  
Sbjct: 18  VDKREKLAEGATVVIEHCTSXRVYGRHAAALSQALQLEAPELPVQVNPSKPRRGSFEVTL 77

Query: 136 -RSEDGKKFISLLDMKRPFTRMKELDMDEVISDI 167
            RS++ +  +     K P  ++K  +  EV+ ++
Sbjct: 78  LRSDNSRVELWTGIKKGPPRKLKFPEPQEVVEEL 111

[Close]
BLAST of Cmc03g0080261 vs. ExPASy TrEMBL
Match: A0A1S3BBW1 (selenoprotein H OS=Cucumis melo OX=3656 GN=LOC103488240 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.8e-85
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG
Sbjct: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60

Query: 61  KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120
           KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL
Sbjct: 61  KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120

Query: 121 LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
Sbjct: 121 LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 172

[Close]
BLAST of Cmc03g0080261 vs. ExPASy TrEMBL
Match: A0A0A0LPC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379100 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.5e-80
Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENG
Sbjct: 1   MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60

Query: 61  KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120
           KVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL
Sbjct: 61  KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120

Query: 121 LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           LNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Sbjct: 121 LNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 172

[Close]
BLAST of Cmc03g0080261 vs. ExPASy TrEMBL
Match: A0A6J1GHF7 (selenoprotein H-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453972 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.6e-64
Identity = 137/176 (77.84%), Postives = 150/176 (85.23%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAP 60
           MAP+KRSK QE+E+A+ KP PA+SRVTR S RLA NSKADLTV E    LPK KKAKR P
Sbjct: 1   MAPKKRSKIQEDETAVAKPVPASSRVTRRSPRLAGNSKADLTVEETVVKLPKRKKAKRGP 60

Query: 61  KENGKVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPG 120
           KENGK EEVEN+   +D   EK   +AK+R VVIEHCKQCQSFKKRA++VQ GLE GVPG
Sbjct: 61  KENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQCQSFKKRAMEVQNGLEKGVPG 120

Query: 121 ITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           ITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKELDM+EVISDIIEKIKG
Sbjct: 121 ITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 176

[Close]
BLAST of Cmc03g0080261 vs. ExPASy TrEMBL
Match: A0A6J1KP64 (selenoprotein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496337 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.0e-62
Identity = 135/176 (76.70%), Postives = 148/176 (84.09%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAP 60
           MAP+KRSK QE+E+A  KP P +SRVTR S RLAANSKADLTV E    LPK KKAKRAP
Sbjct: 1   MAPKKRSKIQEDETAAAKPVPVSSRVTRRSPRLAANSKADLTVEEPVVKLPKKKKAKRAP 60

Query: 61  KENGKVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPG 120
           KEN K EEVEN+   +D   EK   +AK+R VVIEHCKQCQSFKKRA++VQ GLE GVPG
Sbjct: 61  KENEKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQCQSFKKRAMEVQNGLEKGVPG 120

Query: 121 ITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           ITVLLNPDK RRGCFEIRSEDG+KFISLLDMKRPFT+MKELDM+EVISDIIEKIKG
Sbjct: 121 ITVLLNPDKSRRGCFEIRSEDGEKFISLLDMKRPFTQMKELDMEEVISDIIEKIKG 176

[Close]
BLAST of Cmc03g0080261 vs. ExPASy TrEMBL
Match: A0A6J1K9R2 (selenoprotein H-like OS=Cucurbita maxima OX=3661 GN=LOC111492377 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.0e-61
Identity = 135/179 (75.42%), Postives = 152/179 (84.92%), Query Frame = 0 

Query: 1   MAPRKRSKNQEEE---SAMEKPAPATSRVTRSSARLAANSKADL----TVTELPKSKKAK 60
           MAPRKRSKNQE++   +A EKPAP +S VTR S RLA NS ADL     VTELPKSKK K
Sbjct: 1   MAPRKRSKNQEDKPAAAAEEKPAPVSSMVTRRSPRLAVNSMADLVVEEAVTELPKSKKVK 60

Query: 61  RAPKENGKVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENG 120
           RAPKENGK +EV N+  ++D   +K  KDAK+RTVVIE CKQCQSFKKRAIQVQ+GLENG
Sbjct: 61  RAPKENGKAKEVGNEGEEIDAASKKLSKDAKNRTVVIEFCKQCQSFKKRAIQVQSGLENG 120

Query: 121 VPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 173
           V GITVLLNP+KPR+GCFEIRS+DG+KFISLLDMKRPFTRMKEL+M+EVISDIIEKIKG
Sbjct: 121 VSGITVLLNPNKPRKGCFEIRSDDGEKFISLLDMKRPFTRMKELNMEEVISDIIEKIKG 179

[Close]
BLAST of Cmc03g0080261 vs. TAIR 10
Match: AT4G31360.1 (selenium binding )

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-35
Identity = 97/186 (52.15%), Postives = 120/186 (64.52%), Query Frame = 0 

Query: 3   PRKRSKNQEEESAMEKPAPATSRVTRS------SARLAANSKADLTVTELPKSKKAKR-- 62
           P K+SK   EE A      A+SRVTRS      S      +KA  + T+ P +KKAKR  
Sbjct: 2   PPKKSKADGEEKAKPLTTLASSRVTRSMDSRTRSQTQQNGAKAAGSATK-PATKKAKRKN 61

Query: 63  ------APKENGKVEEVENKE--VKVDVGLEKPDKDAKSRT-VVIEHCKQCQSFKKRAIQ 122
                   K+  K EEVE  E  V+ +V  E+P+ +  +RT +VIEHCKQC +FK RAIQ
Sbjct: 62  SAIETGRAKKGKKEEEVEEPEEAVEEEVEKEEPEVEDPTRTKIVIEHCKQCNAFKTRAIQ 121

Query: 123 VQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISD 172
           V+  LE  VPG+TV LNP+KPRRGCFEIR E G+ FISLL+MKRPF  MK LDM+EVI D
Sbjct: 122 VKEALEGAVPGVTVSLNPEKPRRGCFEIREEGGQTFISLLEMKRPFAPMKALDMEEVIED 181

[Close]
BLAST of Cmc03g0080261 vs. TAIR 10
Match: AT2G24440.1 (selenium binding )

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-33
Identity = 86/159 (54.09%), Postives = 105/159 (66.04%), Query Frame = 0 

Query: 25  RVTRSSARLAANSKADLTVTELPKSKKAKR-------APKENGKVEEV----ENKEVKVD 84
           R TRS  +    S + L   E P+ KK K        A K+  K EEV    E +E + D
Sbjct: 26  RKTRSDTK-RDGSSSKLMKIESPEKKKRKTTKAKNVGAAKKKVKKEEVAVKIEKEEEEDD 85

Query: 85  VGLEK-PDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFE 144
              EK  D D+  + +VIEHCKQC+SFK+RA +V+ GLE  VPGI V +NPDKPRRGCFE
Sbjct: 86  DAAEKEEDDDSDKKKIVIEHCKQCKSFKERANEVKEGLEEAVPGIIVTVNPDKPRRGCFE 145

Query: 145 IRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIK 172
           IR E G+ FISLL MKRPFT MKEL+M+EVI+DI+EKIK
Sbjct: 146 IREEGGETFISLLAMKRPFTPMKELNMEEVIADIVEKIK 183

The following BLAST results are available for this feature:
BLAST of Cmc03g0080261 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445096.13.7e-85100.00PREDICTED: selenoprotein H [Cucumis melo][more]
XP_004138763.11.8e-7994.19selenoprotein H [Cucumis sativus][more]
KAE8652181.11.8e-7994.19hypothetical protein Csa_022241 [Cucumis sativus][more]
XP_038886764.11.7e-6984.66selenoprotein H [Benincasa hispida][more]
XP_023536837.14.7e-6478.98selenoprotein H-like [Cucurbita pepo subsp. pepo][more]
BLAST of Cmc03g0080261 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3UQA71.6e-0631.91Selenoprotein H OS=Mus musculus OX=10090 GN=Selenoh PE=1 SV=2[more]
BLAST of Cmc03g0080261 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BBW11.8e-85100.00selenoprotein H OS=Cucumis melo OX=3656 GN=LOC103488240 PE=4 SV=1[more]
A0A0A0LPC98.5e-8094.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379100 PE=4 SV=1[more]
A0A6J1GHF78.6e-6477.84selenoprotein H-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453972 PE... [more]
A0A6J1KP648.0e-6276.70selenoprotein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496337 PE=4... [more]
A0A6J1K9R24.0e-6175.42selenoprotein H-like OS=Cucurbita maxima OX=3661 GN=LOC111492377 PE=4 SV=1[more]
BLAST of Cmc03g0080261 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G31360.14.8e-3552.15selenium binding [more]
AT2G24440.14.5e-3354.09selenium binding [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 83..158
e-value: 3.0E-6
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR33638SELENOPROTEIN Hcoord: 1..171
IPR011893Selenoprotein, Rdx-typeTIGRFAMTIGR02174TIGR02174coord: 88..139
e-value: 4.9E-9
score: 34.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc03g0080261.1Cmc03g0080261.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005794 Golgi apparatus