Cmc03g0078901 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0078901
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome b5 heme-binding domain-containing protein
Location	CMiso1.1chr03: 25357934 .. 25361474 (+)
RNA-Seq Expression	Cmc03g0078901
Synteny	Cmc03g0078901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTAATGAAAAAAAAAAAAGTAAGTAGTTGATAACTCTTTCTCTTGTAATAACAATTCTTTAATATGGCAAATCACAGTTGTGGAAATGTCATAAATTTGGTTGATATGACTCAAAATTGGAGGTTCAAATTCAATTGACCTAACCAAGATCAAGTGGATGGCCCGGTGCCTTTTCCAAAATGATATTCCTTTGGGTCCCCATTTAATTTTGGGTGAGTCATTTGAATTATTCGGAATGGGACATATCTAAAAATCTTTTGTTCCATTGTTTTCCTTCGATTAAAGATAAAATAAAAAGGAGAAAGTGATTGAATTCTTCACTTTCAGTTGAAGCTACCGTCCGGCGTCCCTCATTCCGATCAATCCCCTCCAAGCTAATGGAGCTTACGCCTCGGCAACTGTTGGCCTACAATGGCACCGACCCATCAAAGCCCATCTATGTTGCTATGAAGGGCCAAATCTACGACGTCACATCAGGCGGTTCTTTCTACGGCCCCGGTGGTCCCTACGCCATGTTTGCCGGCAAGGACGCGAGCAGAGCTCTGGCCAAGATGACCAAGAATGAGGAGGACATCACGTCTTCGCTCGAAGGCCTCTCTGAGAAAGAGATCGGTGTTCTCAACGACTGGGAGAACAAATTTCAAGCTAAGTACCCTATTGTTGGCCGTGTTGTTTCTTAAACATGCAAGTTTACGAGTTTCGCTGTGTGGTGTTTGTTGAGTCATCGTAGTTTTCAGAAGTATTAAATGAATAATCGTTCAACTCTGAATATGGGATTGTTAAAATGACTGTAAAGTTTGTTGTGCTTGGTTTAATAAGGGTCTTCAATGGCGGATTGGTATCAGTCTGAACTGCTTGGTGAAATAAGAACTTGCTTACTTATCTCAGCTTAGTTTATTATCAATTATCATATGATTTCTTATGGTTTGGAGTCACTGATTCTGTACAGACTCTTGTTATTCTCGATTGTTTCTGGTCATTTGTCGGGTTTTATTTGTTTCAAAATCCTAAACTATGTTTGTCTATGTATACCTAGTTCTTGTCCAATTTTATCTTTAAAGAAAAAAGTTAAAAAACCTGGGTTTAGTTTTTGGGACAGTATAAGGTTGATTCTGAACACTCGAGTGACAATTTCTTCGAAGTCTGTGTACCTTTCAAATTCATGAACTCCACAGTGTTTTTCATCCATCTTTTCTCTCAATAGGAAACAAAAGTTCACTAGAATTGCTATTACAAGAGAAAGAGTTCACTAGAATTCTAGTTATTACAAAAGTTCACTAGCCTTGAACTCCAAATATTCAAGAAGAACTGAAGAAGATTGAGAGGACAGCCAAGTGAACAGAAATCTAGAAAAACCTGGTTTTGATTCTGAAAGGTTGTCCACATAACATTCATAGAATGAAGTTTTTAAGATACTAGGGAAAACCGCCAAGCTTCTTCCAACATGGAAATAGGACCCAATGCATAAAATTATTGACATCCTCCAGAGTAAAATTTTACAACTATGTCCACCACACCACCCCAGAGACAAGTAGATATGTAGGCTCCTGTTGTAGGGTTGTATAATTTGGATTTTAGGGTTGGTCATAAAAGGGAGTTCCATTTCCATAGGGAACAAATGTACTTCATTGTGGGTCATGGGCCATGGGAAAGGTCTGGAGGATAGTTAATGTACAGACTAAGATTAAGGATTTCAGTATAAAAGAATTTTACATGGTCTTTTTTTCTCTTTTGAGGGGGGGATAGGGAACAAAATTTATTAAAAAAAAATGACATTCAACCTAGGTCAGGGGGAAAAGAAGTAACCCACTAATCAAAATGAAAGATAGGATGATTACAAAAAATCTGATTAAGGGTGCTTCAAATGGAAGCTCTATACTGTACAAAATCAACCCCGAATAGAAGGAAAAAACCATACGTTGCTGTTCATCAATGAAGTCTTTAGTTTCCTTTTATTCAAGTAGACTATAAAAGGTTTCTAGTACATAACAGACACTAGCCAAGAAAATTACCTCTAGTGAGGACTGAGGAGCTCCGGAAGGCAGTCTGTAATATTATTTACTGAGCATTCTGGCAAGCCAACCCTTAGACGCAGAATCAAAAGGGATAAATTAGTGGTTTGAAACTAAGAAAATTAGGATTCCTTCCTTGTTCTCACTCTAAATTGGGCATATAAACTTCAATATGTAAGAAACCAATGGAAAGACTTTCCTCTCTGTGGCTCTTTTCCTTCACAAACTAGCTTAATCATTGGCAAATATGATCATGGGGCTCTATTATTCAGCTTGTAGAAGATGGACTTGCTTGAAAGGAACCCTGATGCTTCCAGATTTCAAGGTCTTACTATATCAATTTATTCTTCAGGCAAATTCAAGTATCAAACAAGTTTCTTCTCAGTCCTAAATCCCACCCTCGATTGCCAGAGTTTCAGCATTCTGAATAAAAAGGATTTTTTAGTAGACCAACAAGAGGGGAAGGAAGGGAAGGGGAGAGAAGCCTACTCCCAACTAGCTAGAAGATGGGTTGTAACTGGTACCAGAGCGTTTCCCCACCCCACCCCACCCCACCCACCATTTGAAAAATAAAATCCAATCCAATAATATTCTTCATTGTTGTTAAGTAGTTGCCTAATCTCTGTCGACTTAGGTTCCAAAAATTGTTTGCGTGGGAGTTACCCCCACGAAGAAAGCCAAGAGAAGTAGGCTGGAAAGTGTTTATTCAATGATGTTGCCACCTTGAATCTGAACCTATATGGTCAACATATCCCGAAACATATGAGAATTCACCTTCATGCTGTAGAATGCATTTGAAGAGAAAACTCAACAAATACAATGGTTAGTGAACAAAGGTAAATTTTATCAACAGTAGAAACCTACCCAAAATGAAACTTTGTGAAGAGTGGTTTATGCCATTTGAAGTAGATTCTTTCACGTTTTTAATCTCGTCATTTAAGGGAGAAAAACAAGCTCAGATCCCTCTCGATCTCTGGTTTTTCTTAATTAATCAATTAATTTTTTTATAGCCATAAAACTCTCATTTTCATGGTCATAAAGTTATTGGTTTATGTCGTAAACTCTTTTCTCCCCTTCTGTTGTAGCATATCACTTCACACAGGTAAGAACGGAATAATTCAGATTGGTTATTCTTTTTATGTTGGTCAAATTGGCTGTTTAATATCTTCAAAGATCATCAGATAATCCATTCAATTCAATCGAAGGTAGAGAGGGCAGCCTCTGGTCTTCACTGTTATTGCTTATTGTCCATAAACCAAGCCTGCCCAAAGACCAGCTCCATCTAACAATCTTCTGAGCCAATGTGGATATCCACTAAAAAGGGGAAATTGTAATAGAAACCAATATATCGATGTATGACACGTAGAATTCATGAATGAGAGTTGTATGTACTATTATATTACTAAGTTTTTAGGAAAATCGTCAATAAGCTTTCCAGTTAACAATTACATGTGTTCATCCGGATTTAAATAATAACAATAACATGCAGCCCCATTGGGAAGACAAAAAATGTAGTGTATGAGCTTC

mRNA sequence

GGTTAATGAAAAAAAAAAAAGTAAGTAGTTGATAACTCTTTCTCTTGTAATAACAATTCTTTAATATGGCAAATCACAGTTGTGGAAATGTCATAAATTTGGTTGATATGACTCAAAATTGGAGGTTCAAATTCAATTGACCTAACCAAGATCAAGTGGATGGCCCGGTGCCTTTTCCAAAATGATATTCCTTTGGGTCCCCATTTAATTTTGGTTGAAGCTACCGTCCGGCGTCCCTCATTCCGATCAATCCCCTCCAAGCTAATGGAGCTTACGCCTCGGCAACTGTTGGCCTACAATGGCACCGACCCATCAAAGCCCATCTATGTTGCTATGAAGGGCCAAATCTACGACGTCACATCAGGCGGTTCTTTCTACGGCCCCGGTGGTCCCTACGCCATGTTTGCCGGCAAGGACGCGAGCAGAGCTCTGGCCAAGATGACCAAGAATGAGGAGGACATCACGTCTTCGCTCGAAGGCCTCTCTGAGAAAGAGATCGGTGTTCTCAACGACTGGGAGAACAAATTTCAAGCTAAGTACCCTATTGTTGGCCGTGTTGTTTCTTAAACATGCAAGTTTACGAGTTTCGCTGTGTGGTGTTTGTTGAGTCATCGTAGTTTTCAGAAGTATTAAATGAATAATCGTTCAACTCTGAATATGGGATTGTTAAAATGACTGTAAAGTTTGTTGTGCTTGGTTTAATAAGGGTCTTCAATGGCGGATTGGTATCAGTCTGAACTGCTTGGTGAAATAAGAACTTGCTTACTTATCTCAGCTTAGTTTATTATCAATTATCATATGATTTCTTATGGTTTGGAGTCACTGATTCTGTACAGACTCTTGTTATTCTCGATTGTTTCTGGTCATTTGTCGGGTTTTATTTGTTTCAAAATCCTAAACTATGTTTGTCTATGTATACCTAGTTCTTGTCCAATTTTATCTTTAAAGAAAAAAGTTAAAAAACCTGGGTTTAGTTTTTGGGACAGTATAAGGTTGATTCTGAACACTCGAGTGACAATTTCTTCGAAGTCTGTGTACCTTTCAAATTCATGAACTCCACAGTGTTTTTCATCCATCTTTTCTCTCAATAGGAAACAAAAGTTCACTAGAATTGCTATTACAAGAGAAAGAGTTCACTAGAATTCTAGTTATTACAAAAGTTCACTAGCCTTGAACTCCAAATATTCAAGAAGAACTGAAGAAGATTGAGAGGACAGCCAAGTGAACAGAAATCTAGAAAAACCTGGTTTTGATTCTGAAAGGTTGTCCACATAACATTCATAGAATGAAGTTTTTAAGATACTAGGGAAAACCGCCAAGCTTCTTCCAACATGGAAATAGGACCCAATGCATAAAATTATTGACATCCTCCAGAGTAAAATTTTACAACTATGTCCACCACACCACCCCAGAGACAAGTAGATATGTAGGCTCCTGTTGTAGGGTTGTATAATTTGGATTTTAGGGTTGGTCATAAAAGGGAGTTCCATTTCCATAGGGAACAAATGTACTTCATTGTGGGTCATGGGCCATGGGAAAGGTCTGGAGGATAGTTAATGTACAGACTAAGATTAAGGATTTCAGTATAAAAGAATTTTACATGGTCTTTTTTTCTCTTTTGAGGGGGGGATAGGGAACAAAATTTATTAAAAAAAAATGACATTCAACCTAGGTCAGGGGGAAAAGAAGTAACCCACTAATCAAAATGAAAGATAGGATGATTACAAAAAATCTGATTAAGGGTGCTTCAAATGGAAGCTCTATACTGTACAAAATCAACCCCGAATAGAAGGAAAAAACCATACGTTGCTGTTCATCAATGAAGTCTTTAGTTTCCTTTTATTCAAGTAGACTATAAAAGGTTTCTAGTACATAACAGACACTAGCCAAGAAAATTACCTCTAGTGAGGACTGAGGAGCTCCGGAAGGCAGTCTGTAATATTATTTACTGAGCATTCTGGCAAGCCAACCCTTAGACGCAGAATCAAAAGGGATAAATTAGTGGTTTGAAACTAAGAAAATTAGGATTCCTTCCTTGTTCTCACTCTAAATTGGGCATATAAACTTCAATATGTAAGAAACCAATGGAAAGACTTTCCTCTCTGTGGCTCTTTTCCTTCACAAACTAGCTTAATCATTGGCAAATATGATCATGGGGCTCTATTATTCAGCTTGTAGAAGATGGACTTGCTTGAAAGGAACCCTGATGCTTCCAGATTTCAAGGTCTTACTATATCAATTTATTCTTCAGGCAAATTCAAGTATCAAACAAGTTTCTTCTCAGTCCTAAATCCCACCCTCGATTGCCAGAGTTTCAGCATTCTGAATAAAAAGGATTTTTTAGTAGACCAACAAGAGGGGAAGGAAGGGAAGGGGAGAGAAGCCTACTCCCAACTAGCTAGAAGATGGGTTGTAACTGGTACCAGAGCGTTTCCCCACCCCACCCCACCCCACCCACCATTTGAAAAATAAAATCCAATCCAATAATATTCTTCATTGTTGTTAAGTAGTTGCCTAATCTCTGTCGACTTAGGTTCCAAAAATTGTTTGCGTGGGAGTTACCCCCACGAAGAAAGCCAAGAGAAGTAGGCTGGAAAGTGTTTATTCAATGATGTTGCCACCTTGAATCTGAACCTATATGGTCAACATATCCCGAAACATATGAGAATTCACCTTCATGCTGTAGAATGCATTTGAAGAGAAAACTCAACAAATACAATGGTTAGTGAACAAAGGTAAATTTTATCAACAGTAGAAACCTACCCAAAATGAAACTTTGTGAAGAGTGGTTTATGCCATTTGAAGTAGATTCTTTCACGTTTTTAATCTCGTCATTTAAGGGAGAAAAACAAGCTCAGATCCCTCTCGATCTCTGGTTTTTCTTAATTAATCAATTAATTTTTTTATAGCCATAAAACTCTCATTTTCATGGTCATAAAGTTATTGGTTTATGTCGTAAACTCTTTTCTCCCCTTCTGTTGTAGCATATCACTTCACACAGGTAAGAACGGAATAATTCAGATTGGTTATTCTTTTTATGTTGGTCAAATTGGCTGTTTAATATCTTCAAAGATCATCAGATAATCCATTCAATTCAATCGAAGGTAGAGAGGGCAGCCTCTGGTCTTCACTGTTATTGCTTATTGTCCATAAACCAAGCCTGCCCAAAGACCAGCTCCATCTAACAATCTTCTGAGCCAATGTGGATATCCACTAAAAAGGGGAAATTGTAATAGAAACCAATATATCGATGTATGACACGTAGAATTCATGAATGAGAGTTGTATGTACTATTATATTACTAAGTTTTTAGGAAAATCGTCAATAAGCTTTCCAGTTAACAATTACATGTGTTCATCCGGATTTAAATAATAACAATAACATGCAGCCCCATTGGGAAGACAAAAAATGTAGTGTATGAGCTTC

Coding sequence (CDS)

ATGGCCCGGTGCCTTTTCCAAAATGATATTCCTTTGGGTCCCCATTTAATTTTGGTTGAAGCTACCGTCCGGCGTCCCTCATTCCGATCAATCCCCTCCAAGCTAATGGAGCTTACGCCTCGGCAACTGTTGGCCTACAATGGCACCGACCCATCAAAGCCCATCTATGTTGCTATGAAGGGCCAAATCTACGACGTCACATCAGGCGGTTCTTTCTACGGCCCCGGTGGTCCCTACGCCATGTTTGCCGGCAAGGACGCGAGCAGAGCTCTGGCCAAGATGACCAAGAATGAGGAGGACATCACGTCTTCGCTCGAAGGCCTCTCTGAGAAAGAGATCGGTGTTCTCAACGACTGGGAGAACAAATTTCAAGCTAAGTACCCTATTGTTGGCCGTGTTGTTTCTTAA

Protein sequence

MARCLFQNDIPLGPHLILVEATVRRPSFRSIPSKLMELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS

Homology

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BLAST of Cmc03g0078901 vs. NCBI nr
Match: XP_008445274.1 (PREDICTED: probable steroid-binding protein 3 [Cucumis melo] >KAA0064879.1 putative steroid-binding protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 204.5 bits (519), Expect = 5.7e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT
Sbjct: 1   MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS
Sbjct: 61  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 100

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BLAST of Cmc03g0078901 vs. NCBI nr
Match: XP_038885033.1 (probable steroid-binding protein 3 [Benincasa hispida])

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MELTP QLLAYNGT+PSKPIYVA+KGQIYDV +G SFYGPGGPYAMFAGKDASRALAKMT
Sbjct: 1   MELTPGQLLAYNGTNPSKPIYVALKGQIYDVAAGVSFYGPGGPYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDITSSLEGLSEKEIGVLNDWE KFQAKYPIVGRVVS
Sbjct: 61  KNEEDITSSLEGLSEKEIGVLNDWEKKFQAKYPIVGRVVS 100

[Close]

BLAST of Cmc03g0078901 vs. NCBI nr
Match: XP_004138698.1 (probable steroid-binding protein 3 [Cucumis sativus] >KGN63002.1 hypothetical protein Csa_021837 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 7.2e-44
Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MELTP QL  YNGTDP+KPIYVA+KGQIY+VTSG SFYG GGPYAMFAGKDASRALAKMT
Sbjct: 1   MELTPLQLSVYNGTDPTKPIYVALKGQIYNVTSGRSFYGSGGPYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS
Sbjct: 61  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 100

[Close]

BLAST of Cmc03g0078901 vs. NCBI nr
Match: XP_022997574.1 (probable steroid-binding protein 3 [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 4.6e-43
Identity = 89/100 (89.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MELTP+QL+AYNGTDPSKPIYVA+KG+I+DVT+G SFYGPGG YAMFAGKDASRALAKMT
Sbjct: 1   MELTPQQLIAYNGTDPSKPIYVALKGRIFDVTTGVSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDI SSLEGLSEKEIGVLNDWE KF+AKYPIVGRVVS
Sbjct: 61  KNEEDINSSLEGLSEKEIGVLNDWEKKFEAKYPIVGRVVS 100

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BLAST of Cmc03g0078901 vs. NCBI nr
Match: XP_022131551.1 (probable steroid-binding protein 3 [Momordica charantia])

HSP 1 Score: 182.2 bits (461), Expect = 3.0e-42
Identity = 86/100 (86.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MEL+P+QL+AYNGTDPSKPIYVA+KG+++DVT+G SFYGPGG YAMFAGKDASRALAKMT
Sbjct: 1   MELSPQQLIAYNGTDPSKPIYVAVKGRVFDVTTGSSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDI SSL+GLSEKEIGVLNDWE KF+AKYPIVGRVVS
Sbjct: 61  KNEEDIISSLDGLSEKEIGVLNDWEKKFEAKYPIVGRVVS 100

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BLAST of Cmc03g0078901 vs. ExPASy Swiss-Prot
Match: Q9SK39 (Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.1e-38
Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           ME T  QL  YNGTD SKPIYVA+KG+++DVT+G SFYG GG Y+MFAGKDASRAL KM+
Sbjct: 1   MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMS 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEED++ SLEGL+EKEI  LNDWE KF+AKYP+VGRVVS
Sbjct: 61  KNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100

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BLAST of Cmc03g0078901 vs. ExPASy Swiss-Prot
Match: Q9FVZ9 (Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 32  PSKLMELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRAL 91
           P ++ E+T  +LL Y+G+DP KP+ +A+KGQIYDV+    FYGPGGPYA+FAGKDASRAL
Sbjct: 115 PVQVGEITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALFAGKDASRAL 174

Query: 92  AKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRV 134
           AKM+   +D+T  + GLS  E+  L DWE KF +KY  VG +
Sbjct: 175 AKMSFEPQDLTDDISGLSLLELSALQDWEYKFSSKYVKVGTI 216

[Close]

BLAST of Cmc03g0078901 vs. ExPASy Swiss-Prot
Match: Q9FVZ7 (Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.3e-27
Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 32  PSKLMELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRAL 91
           P +L E++  +L  Y+G+DP KP+ +A+KGQIYDVT    FYGPGGPYA+FAGKDASRAL
Sbjct: 68  PVQLGEVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRAL 127

Query: 92  AKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRV 134
           AKM+   +D+T  + GL   E+  L DWE KF  KY  VG V
Sbjct: 128 AKMSFEPQDLTGDISGLGPFELDALQDWEYKFMGKYVKVGTV 169

[Close]

BLAST of Cmc03g0078901 vs. ExPASy Swiss-Prot
Match: Q9XFM6 (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 32  PSKLMELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRAL 91
           P ++ E+T  +L  Y+G+DP KP+ +A+K QIYDVT    FYGPGGPYA+FAGKDASRAL
Sbjct: 69  PVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRAL 128

Query: 92  AKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRV 134
           AKM+  E+D+T  + GL   E+  L DWE KF +KY  VG V
Sbjct: 129 AKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170

[Close]

BLAST of Cmc03g0078901 vs. ExPASy Swiss-Prot
Match: Q9M2Z4 (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.1e-26
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 32  PSKLMELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRAL 91
           P +L E+T  +L  Y+G+D  KP+ +A+KGQIYDV+    FYGPGGPYA+FAGKDASRAL
Sbjct: 65  PVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRAL 124

Query: 92  AKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRV 134
           AKM+  ++D+T  + GL   E+  L DWE KF +KY  VG +
Sbjct: 125 AKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166

[Close]

BLAST of Cmc03g0078901 vs. ExPASy TrEMBL
Match: A0A5A7VHD3 (Putative steroid-binding protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001920 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT
Sbjct: 1   MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS
Sbjct: 61  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 100

[Close]

BLAST of Cmc03g0078901 vs. ExPASy TrEMBL
Match: A0A1S3BD16 (probable steroid-binding protein 3 OS=Cucumis melo OX=3656 GN=LOC103488356 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT
Sbjct: 1   MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS
Sbjct: 61  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 100

[Close]

BLAST of Cmc03g0078901 vs. ExPASy TrEMBL
Match: A0A0A0LQG3 (Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382750 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.5e-44
Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MELTP QL  YNGTDP+KPIYVA+KGQIY+VTSG SFYG GGPYAMFAGKDASRALAKMT
Sbjct: 1   MELTPLQLSVYNGTDPTKPIYVALKGQIYNVTSGRSFYGSGGPYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS
Sbjct: 61  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 100

[Close]

BLAST of Cmc03g0078901 vs. ExPASy TrEMBL
Match: A0A6J1KBX0 (probable steroid-binding protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111492464 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.2e-43
Identity = 89/100 (89.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MELTP+QL+AYNGTDPSKPIYVA+KG+I+DVT+G SFYGPGG YAMFAGKDASRALAKMT
Sbjct: 1   MELTPQQLIAYNGTDPSKPIYVALKGRIFDVTTGVSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDI SSLEGLSEKEIGVLNDWE KF+AKYPIVGRVVS
Sbjct: 61  KNEEDINSSLEGLSEKEIGVLNDWEKKFEAKYPIVGRVVS 100

[Close]

BLAST of Cmc03g0078901 vs. ExPASy TrEMBL
Match: A0A6J1BPT6 (probable steroid-binding protein 3 OS=Momordica charantia OX=3673 GN=LOC111004708 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42
Identity = 86/100 (86.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           MEL+P+QL+AYNGTDPSKPIYVA+KG+++DVT+G SFYGPGG YAMFAGKDASRALAKMT
Sbjct: 1   MELSPQQLIAYNGTDPSKPIYVAVKGRVFDVTTGSSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEEDI SSL+GLSEKEIGVLNDWE KF+AKYPIVGRVVS
Sbjct: 61  KNEEDIISSLDGLSEKEIGVLNDWEKKFEAKYPIVGRVVS 100

[Close]

BLAST of Cmc03g0078901 vs. TAIR 10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2 )

HSP 1 Score: 158.3 bits (399), Expect = 4.3e-39
Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 36  MELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRALAKMT 95
           ME T  QL  YNGTD SKPIYVA+KG+++DVT+G SFYG GG Y+MFAGKDASRAL KM+
Sbjct: 1   MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMS 60

Query: 96  KNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRVVS 136
           KNEED++ SLEGL+EKEI  LNDWE KF+AKYP+VGRVVS
Sbjct: 61  KNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100

[Close]

BLAST of Cmc03g0078901 vs. TAIR 10
Match: AT5G52240.1 (membrane steroid binding protein 1 )

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 32  PSKLMELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRAL 91
           P ++ E+T  +L  Y+G+DP KP+ +A+K QIYDVT    FYGPGGPYA+FAGKDASRAL
Sbjct: 69  PVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRAL 128

Query: 92  AKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRV 134
           AKM+  E+D+T  + GL   E+  L DWE KF +KY  VG V
Sbjct: 129 AKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170

[Close]

BLAST of Cmc03g0078901 vs. TAIR 10
Match: AT5G52240.2 (membrane steroid binding protein 1 )

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 32  PSKLMELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRAL 91
           P ++ E+T  +L  Y+G+DP KP+ +A+K QIYDVT    FYGPGGPYA+FAGKDASRAL
Sbjct: 69  PVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRAL 128

Query: 92  AKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRV 134
           AKM+  E+D+T  + GL   E+  L DWE KF +KY  VG V
Sbjct: 129 AKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170

[Close]

BLAST of Cmc03g0078901 vs. TAIR 10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3 )

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-27
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 32  PSKLMELTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFYGPGGPYAMFAGKDASRAL 91
           P +L E+T  +L  Y+G+D  KP+ +A+KGQIYDV+    FYGPGGPYA+FAGKDASRAL
Sbjct: 65  PVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRAL 124

Query: 92  AKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRV 134
           AKM+  ++D+T  + GL   E+  L DWE KF +KY  VG +
Sbjct: 125 AKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166

[Close]

BLAST of Cmc03g0078901 vs. TAIR 10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4 )

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16
Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 16  LILVEATVRRPSFRSIPSKLME--LTPRQLLAYNGTDPSKPIYVAMKGQIYDVTSGGSFY 75
           ++++ +   R SF+S   +  +   +  +L  YNGTD + PI + + G ++DVT G   Y
Sbjct: 18  IVVLVSLYFRSSFKSPQHQYQKRLFSAEELALYNGTDETLPILLGILGSVFDVTKGKFHY 77

Query: 76  GPGGPYAMFAGKDASRALAKMTKNEEDITSSLEGLSEKEIGVLNDWENKFQAKYPIVGRV 135
           G GG Y  FAG+DASRA        + +T SL+GLS  E+  + DW   +   Y  VG++
Sbjct: 78  GSGGGYNHFAGRDASRAFVSGNFTGDGLTDSLQGLSSSEVKSIVDWRGFYSRTYTPVGKL 137

The following BLAST results are available for this feature:

BLAST of Cmc03g0078901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445274.1	5.7e-49	100.00	PREDICTED: probable steroid-binding protein 3 [Cucumis melo] >KAA0064879.1 putat...	[more]
XP_038885033.1	1.4e-44	93.00	probable steroid-binding protein 3 [Benincasa hispida]	[more]
XP_004138698.1	7.2e-44	92.00	probable steroid-binding protein 3 [Cucumis sativus] >KGN63002.1 hypothetical pr...	[more]
XP_022997574.1	4.6e-43	89.00	probable steroid-binding protein 3 [Cucurbita maxima]	[more]
XP_022131551.1	3.0e-42	86.00	probable steroid-binding protein 3 [Momordica charantia]	[more]

BLAST of Cmc03g0078901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK39	6.1e-38	74.00	Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 S...	[more]
Q9FVZ9	1.3e-27	55.88	Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=M...	[more]
Q9FVZ7	8.3e-27	55.88	Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=M...	[more]
Q9XFM6	1.8e-26	55.88	Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1...	[more]
Q9M2Z4	3.1e-26	53.92	Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1...	[more]

BLAST of Cmc03g0078901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHD3	2.7e-49	100.00	Putative steroid-binding protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BD16	2.7e-49	100.00	probable steroid-binding protein 3 OS=Cucumis melo OX=3656 GN=LOC103488356 PE=4 ...	[more]
A0A0A0LQG3	3.5e-44	92.00	Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 ...	[more]
A0A6J1KBX0	2.2e-43	89.00	probable steroid-binding protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111492464 P...	[more]
A0A6J1BPT6	1.5e-42	86.00	probable steroid-binding protein 3 OS=Momordica charantia OX=3673 GN=LOC11100470...	[more]

BLAST of Cmc03g0078901 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24940.1	4.3e-39	74.00	membrane-associated progesterone binding protein 2	[more]
AT5G52240.1	1.3e-27	55.88	membrane steroid binding protein 1	[more]
AT5G52240.2	1.3e-27	55.88	membrane steroid binding protein 1	[more]
AT3G48890.1	2.2e-27	53.92	membrane-associated progesterone binding protein 3	[more]
AT4G14965.1	3.0e-16	35.54	membrane-associated progesterone binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001199	Cytochrome b5-like heme/steroid binding domain	SMART	SM01117	Cyt_b5_2	coord: 38..134 e-value: 5.6E-21 score: 85.7
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 39..133 e-value: 2.9E-14 score: 53.0
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 35..135 e-value: 7.1E-39 score: 134.1
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 32..134
None	No IPR available	PANTHER	PTHR10281:SF76	CALCUTTA CUP-RELATED	coord: 29..134
None	No IPR available	PANTHER	PTHR10281	MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED	coord: 29..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0078901.1	Cmc03g0078901.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016020	membrane