
Cmc03g0077921 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACTCGGGCCCGGATCCATTTACCTATGTCAGTTGTAGTGATGAAGGTTTCTAGGAGATTTGACACTATACCAAGTGGCACATTATACCCAAACGGTGATGAAATCAAGTACTTGCAAAGGCTTGTCAAGTACACGGCGAGTATTGAGTTTAACTTGCATTCTCCAAATTGTTGTTTGCATCAATTCTCCTATTTGTTGTTTTATTCATTGATATACAAGTTGTTGCTATATAACGTGTACTCATTTTCTTATGTACTGTCAGTTACCTAAGTTCATATTGATGGTTAATTTCCTTCTATATATTGCTAAATTTACCTTGGCATATGATTTTTGTTGTATGCTAAAGGTGATTTCATTTGTTTCTTAATTTTGACAATTTATAGATTATGCTATTATCGTGTTAAATAAACCACCCAAACTACCGGTGAAGGTTTTCCTTCTTATTCTTTTTTATTTTATGTATTTTTTTTTTTGGTGGTGGGCAGGTGGGGTTGGAGGTTCGTACTCTGGATTTTGAAACAATTATGGTATTGTCAGGGGAATGTTCTAGTTCACAATAGTATAGATGCATTGGCGACTGTAGCATTATCTTATGATTACAATGATGGACCCAAGTTGGTAGGCTTCTTGTTTGCGTTTGAGCAACTAAGTAGATGTTTGTTATCAAAAGATTCTATGTTGATAATGAAAACAGCAAAGACACTATCCGTTAACCATTTGCCCTTTGATTTTGTACTTTTAGTTTTTTGA ATGGAGACTCGGGCCCGGATCCATTTACCTATGTCAGTTGTAGTGATGAAGGTTTCTAGGAGATTTGACACTATACCAAGTGGCACATTATACCCAAACGGTGATGAAATCAAGTACTTGCAAAGGCTTGTCAAGTACACGGCGAGTATTGAGTTTAACTTGCATTCTCCAAATTGTTGTTTGCATCAATTCTCCTATTTGTTGTTTTATTCATTGATATACAAGTTGTGGGGTTGGAGGTTCGTACTCTGGATTTTGAAACAATTATGGTATTGTCAGGGGAATGTTCTAGTTCACAATAGTATAGATGCATTGGCGACTGTAGCATTATCTTATGATTACAATGATGGACCCAAGTTGGTAGGCTTCTTGTTTGCGTTTGAGCAACTAAGTAGATGTTTGTTATCAAAAGATTCTATGTTGATAATGAAAACAGCAAAGACACTATCCGTTAACCATTTGCCCTTTGATTTTGTACTTTTAGTTTTTTGA ATGGAGACTCGGGCCCGGATCCATTTACCTATGTCAGTTGTAGTGATGAAGGTTTCTAGGAGATTTGACACTATACCAAGTGGCACATTATACCCAAACGGTGATGAAATCAAGTACTTGCAAAGGCTTGTCAAGTACACGGCGAGTATTGAGTTTAACTTGCATTCTCCAAATTGTTGTTTGCATCAATTCTCCTATTTGTTGTTTTATTCATTGATATACAAGTTGTGGGGTTGGAGGTTCGTACTCTGGATTTTGAAACAATTATGGTATTGTCAGGGGAATGTTCTAGTTCACAATAGTATAGATGCATTGGCGACTGTAGCATTATCTTATGATTACAATGATGGACCCAAGTTGGTAGGCTTCTTGTTTGCGTTTGAGCAACTAAGTAGATGTTTGTTATCAAAAGATTCTATGTTGATAATGAAAACAGCAAAGACACTATCCGTTAACCATTTGCCCTTTGATTTTGTACTTTTAGTTTTTTGA METRARIHLPMSVVVMKVSRRFDTIPSGTLYPNGDEIKYLQRLVKYTASIEFNLHSPNCCLHQFSYLLFYSLIYKLWGWRFVLWILKQLWYCQGNVLVHNSIDALATVALSYDYNDGPKLVGFLFAFEQLSRCLLSKDSMLIMKTAKTLSVNHLPFDFVLLVF Homology
BLAST of Cmc03g0077921 vs. NCBI nr
Match: TYK06632.1 (RNA pseudouridine synthase 3 [Cucumis melo var. makuwa]) HSP 1 Score: 130.2 bits (326), Expect = 1.6e-26 Identity = 82/158 (51.90%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of Cmc03g0077921 vs. NCBI nr
Match: XP_011649894.1 (RNA pseudouridine synthase 3, mitochondrial [Cucumis sativus] >KGN63305.2 hypothetical protein Csa_022127 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 5.5e-22 Identity = 76/158 (48.10%), Postives = 88/158 (55.70%), Query Frame = 0
BLAST of Cmc03g0077921 vs. NCBI nr
Match: XP_022131829.1 (RNA pseudouridine synthase 3, mitochondrial isoform X5 [Momordica charantia] >XP_022131830.1 RNA pseudouridine synthase 3, mitochondrial isoform X5 [Momordica charantia] >XP_022131831.1 RNA pseudouridine synthase 3, mitochondrial isoform X5 [Momordica charantia]) HSP 1 Score: 114.4 bits (285), Expect = 9.3e-22 Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Cmc03g0077921 vs. NCBI nr
Match: XP_022131828.1 (RNA pseudouridine synthase 3, mitochondrial isoform X4 [Momordica charantia]) HSP 1 Score: 114.4 bits (285), Expect = 9.3e-22 Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Cmc03g0077921 vs. NCBI nr
Match: XP_022131826.1 (RNA pseudouridine synthase 3, mitochondrial isoform X2 [Momordica charantia]) HSP 1 Score: 114.4 bits (285), Expect = 9.3e-22 Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Cmc03g0077921 vs. ExPASy Swiss-Prot
Match: Q5XET6 (RNA pseudouridine synthase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g78910 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16 Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of Cmc03g0077921 vs. ExPASy Swiss-Prot
Match: Q0J4D4 (RNA pseudouridine synthase 3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0520100 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.8e-13 Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 0
BLAST of Cmc03g0077921 vs. ExPASy TrEMBL
Match: A0A5D3C5S8 (RNA pseudouridine synthase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001080 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 7.9e-27 Identity = 82/158 (51.90%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of Cmc03g0077921 vs. ExPASy TrEMBL
Match: A0A0A0LQ04 (PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G402020 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.6e-22 Identity = 76/158 (48.10%), Postives = 88/158 (55.70%), Query Frame = 0
BLAST of Cmc03g0077921 vs. ExPASy TrEMBL
Match: A0A6J1BQK2 (RNA pseudouridine synthase 3, mitochondrial isoform X5 OS=Momordica charantia OX=3673 GN=LOC111004890 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 4.5e-22 Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Cmc03g0077921 vs. ExPASy TrEMBL
Match: A0A6J1BQS0 (RNA pseudouridine synthase 3, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004890 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 4.5e-22 Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Cmc03g0077921 vs. ExPASy TrEMBL
Match: A0A6J1BQJ8 (RNA pseudouridine synthase 3, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004890 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 4.5e-22 Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Cmc03g0077921 vs. TAIR 10
Match: AT1G78910.1 (Pseudouridine synthase family protein ) HSP 1 Score: 87.8 bits (216), Expect = 8.7e-18 Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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