Cmc03g0077361 (gene) Melon (Charmono) v1.1

Overview
NameCmc03g0077361
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description6,7-dimethyl-8-ribityllumazine synthase
LocationCMiso1.1chr03: 24316914 .. 24320155 (+)
RNA-Seq ExpressionCmc03g0077361
SyntenyCmc03g0077361
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGAAAAGAATGTGAGTGTATATATATATATATATAGGCATAATTCTGATCGAGAAAGTCAAGCGAGGAGAATCCCCACACTGTGCTTCTTCTTCTTCTTTTTCTTCTTTTTCTTCTAGTTGTTATTGGAGTTGATAATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGCTTGGTTCATCGTCAAAATCTCACGCTCTCATTTTCCAATTCCAACTTCAAACCCACTCAACTTCAGTTTCAGGGCTCACTTTCTTCTAAATCTCAACCCCTCTCCTTCTCTTCTCGACTCAACCTTCTTAACCATGCCTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGTTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTCATTTCTCTTTCCCCCTCTTTTTTTTTTTTTTTTTTTCTTCCTTTTTTCTCCTTGTTCTTCTAATTCATGACGTTCTGTTCGTTCTCGAGGCTACTTAGCCGTTTTTGTTCATAATTTTGAACTCTTAAGTGGTTTTTCCTTATCGTTTACCTAAAAACGTGTAGTAAATGTAATGATGTATCGTCTGAGAATTTATTCGCTTCTAAGCACCGTTCTATTGATTTGTTGCCTGCATTCAATTCAAAAATTATGCGACAATGATTAATATCTGTGATGTATTAAATTGAACTTCTTACAATTTTTTTCGATGCGGCTGTTCTTGTGAGTTCTGTTATCATGAATCTAAACTGAGTCTTTTTTTTTTTTTTTTTTTACTCCCTTGTAATTTATGTGTGTGGACTCGTGGGATTTAATCGTAACATCATTCATGCTTGCATATCTCGTTAACGGGTTTTTGATTATTGAAAGGATTGTTTTTCTTTGATGAAGGTTGTGGGGCGGTTCAATGAAATTGTGACAAGGCCAATGCTCGAGGGAGCCTTGTCTACTTTCAAAAGCTATTCAGTTCAAGACGAGGACGTTGATGTAAGTGTTTCGTTATACAACATGTGAAACTCGCAATTTATCTACATATTATGGGTACAAGTAAAATAGGGTGGCTGAACTTGATTGGCAGACAACAAGTATAATAGCATACACCTTTCATCAGATTTGCATTGAGAGTGAACGTGTATCTGACCTTGCTAGTTGACAAACAGCTTAACTTTGCTTGACATATTGACTTTATTATTTACCTCGCCATCATATTAGGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAAGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGGTATGATTTTCTGTAACATTTATCAAGTCCTTTTATATATTATAGGCTTGAATGCACTTATTAATACCATGAACCACTTCATTATGATAGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAACTCTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGTTGGCTTTCATGTTTTTGTAGTTTAGTAGAACTTTATATTCTTTTATCCTATTAATTTAAGTTTTCTAACCAATTTTTGTTCTGTATTGCTTATCTTTTATGAGTTCAACTCAAGGCTTTTGATTTGAGTCCATCATTTATAGGAGTTTCTAAATTCTAAATATTGCAGTCGAGTTGACTTAATTATTCCAATCTTGGCAACTATGAACCGATTTAAGGAATATCAGGGTATGAAGATGACAAGAAGCACCTGGTTCTTATAGATCTATATAAATTGTGTGATTACGTGCACATTCCCAGCCTTTTATTGAAAGAAAAAATATTGGTTTCCCCGATTAAAGCTTAACATTAATTTCATATGATAACATCAAGGGCCTTGGTCATCAGTCGAAGTATCTCCTTTTAAAGGTTATAGGTTATATTTCAGTAAATCGAGACCCCTTTTAAAGCATTCCAATATAAGCCTTAGTAATAGTTTGAGTTGGAACAATAATGATTTATGTTTAAGCTGTTGGGACTTGGGAGCTATAGTGAACTATGTTCTTGTTCTTGTATAACCGACATGCGAATTATCTTTTGCTCCTTATATGTGCAAACCTGTGTTAAAATTATTGATAGTAATCTCTGTAACCATATTTTTAGAGAAGTACCATTTATATCAATGCTTCCATCTTAGTTCTACTCTTTCTTCATCTTTGAGTTGTTGCTACATGAAGCTAAAGCCATTTTCTTATGCCTGTGTAGGAGTCCCATGCGTATTTAGCGTCTTGACTTGTGACACCCTAGAACAGGTAAATATGATCTAAACTGACTGTTACAAGTATTATCCCGCCTAGAGAATTGTTCTCAAAAGGAGCTACGTGATTTCTGGTCGTTACTTGCTTTTCACCACTTCTTAATTTTTCTAAAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTGTAAGTTGTTTTAGTTAGTTTATACTGTTCAAACGGTTGATTGTTCTAAGAAAAGAGACTGATTACTAACATATTTACTATTCAAACGGTTTGCCAAAGCAAAAGTATATGGGAAAAATGTCTAATATGTGAACGAAAAGCTCTAAATTCGTTTTCTTTCAATGCATATATATAGGTTTATATTTGACTTTGAATTTTATTGACATATGCAAGTGGTACTGCTAGGATTTATCTTTTTGAACTTTATGATTATTATTATTATTATTATTTCTGATTTGTGAAAAAATCTTTTGTTATAAGATTTTGCATCATTTTGGTCAATTTCACTTCTTCTGCAGATGGAGCTGGCGTCTATGTTTGAGTACGATCTGAAGTAGTGGAGAAATAAGATCTAACAATTTCCATTATCCTTAGTGTTGCGGTTTCTTGCTTTTTCCCTGTTGTCTTTAGTAATGGTAGAATGCTTCATCAAAATGCAAAAAGAAAAAAAAAAAAGAAAGAAAGAAAAGCCACATGATGTCTCAAACTGAAGTCGGCTGAAACTGGTCTAGAGGAAGGAGAAGGTTCCATGATTTCAATTTTCAAAGTTTCTTTTCTCAGCTTTGCCTTTTAACCGTTTATGTTAGAATAAAGATGTGAGGAATTTTATTTGTGATGCACAATGAACAGAGTTTATATTATTTAAGAGGCCATGATGATAATCATTAATAAGTTCAACTCGGGTTACTTTGATATTTTGATGTTTTCTATTATTCAAATTCATCTTGTTTTCCAGGTTGACCCTT

mRNA sequence

TGTGAAAAGAATGTGAGTGTATATATATATATATATAGGCATAATTCTGATCGAGAAAGTCAAGCGAGGAGAATCCCCACACTGTGCTTCTTCTTCTTCTTTTTCTTCTTTTTCTTCTAGTTGTTATTGGAGTTGATAATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGCTTGGTTCATCGTCAAAATCTCACGCTCTCATTTTCCAATTCCAACTTCAAACCCACTCAACTTCAGTTTCAGGGCTCACTTTCTTCTAAATCTCAACCCCTCTCCTTCTCTTCTCGACTCAACCTTCTTAACCATGCCTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGTTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTCAATGAAATTGTGACAAGGCCAATGCTCGAGGGAGCCTTGTCTACTTTCAAAAGCTATTCAGTTCAAGACGAGGACGTTGATGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAAGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAACTCTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGAGTCCCATGCGTATTTAGCGTCTTGACTTGTGACACCCTAGAACAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTATGGAGCTGGCGTCTATGTTTGAGTACGATCTGAAGTAGTGGAGAAATAAGATCTAACAATTTCCATTATCCTTAGTGTTGCGGTTTCTTGCTTTTTCCCTGTTGTCTTTAGTAATGGTAGAATGCTTCATCAAAATGCAAAAAGAAAAAAAAAAAAGAAAGAAAGAAAAGCCACATGATGTCTCAAACTGAAGTCGGCTGAAACTGGTCTAGAGGAAGGAGAAGGTTCCATGATTTCAATTTTCAAAGTTTCTTTTCTCAGCTTTGCCTTTTAACCGTTTATGTTAGAATAAAGATGTGAGGAATTTTATTTGTGATGCACAATGAACAGAGTTTATATTATTTAAGAGGCCATGATGATAATCATTAATAAGTTCAACTCGGGTTACTTTGATATTTTGATGTTTTCTATTATTCAAATTCATCTTGTTTTCCAGGTTGACCCTT

Coding sequence (CDS)

ATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGCTTGGTTCATCGTCAAAATCTCACGCTCTCATTTTCCAATTCCAACTTCAAACCCACTCAACTTCAGTTTCAGGGCTCACTTTCTTCTAAATCTCAACCCCTCTCCTTCTCTTCTCGACTCAACCTTCTTAACCATGCCTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGTTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTCAATGAAATTGTGACAAGGCCAATGCTCGAGGGAGCCTTGTCTACTTTCAAAAGCTATTCAGTTCAAGACGAGGACGTTGATGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAAGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAACTCTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGAGTCCCATGCGTATTTAGCGTCTTGACTTGTGACACCCTAGAACAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTATGGAGCTGGCGTCTATGTTTGAGTACGATCTGAAGTAG

Protein sequence

MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSPNNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDVDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNSGVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK
Homology
BLAST of Cmc03g0077361 vs. NCBI nr
Match: XP_008445594.1 (PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 2.3e-119
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS
Sbjct: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYD 227
           GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYD
Sbjct: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYD 226

BLAST of Cmc03g0077361 vs. NCBI nr
Match: KAE8647237.1 (hypothetical protein Csa_018989 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 216/228 (94.74%), Postives = 223/228 (97.81%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTLSFSN NFKPTQLQFQG+LS+KSQPLSFSS+ NLLNH SSP
Sbjct: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           NNHRSSFAHTAAVRHI GSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           +DVVWVPGSFDIPVVAQ+LGQSGKYHAVLCIGAVIRGDTSHYDAVVN SASGVLSAGLNS
Sbjct: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           GVPC+FSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFE+DLK
Sbjct: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 269

BLAST of Cmc03g0077361 vs. NCBI nr
Match: ADQ00634.1 (6,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 216/228 (94.74%), Postives = 223/228 (97.81%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTLSFSN NFKPTQLQFQG+LS+KSQPLSFSS+ NLLNH SSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 60

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           NNHRSSFAHTAAVRHI GSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           +DVVWVPGSFDIPVVAQ+LGQSGKYHAVLCIGAVIRGDTSHYDAVVN SASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 180

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           GVPC+FSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFE+DLK
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 228

BLAST of Cmc03g0077361 vs. NCBI nr
Match: NP_001295819.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Cucumis sativus] >ABZ88150.1 6,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus])

HSP 1 Score: 421.4 bits (1082), Expect = 5.0e-114
Identity = 214/228 (93.86%), Postives = 222/228 (97.37%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTLSFSN NFKPTQLQFQG+L +KSQPLSFSS+ NLLNH SSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLPAKSQPLSFSSQFNLLNHPSSP 60

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           NNHRSSFAHTAAVRHI GSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           +DVVWVPGSFDIPVVAQ+LGQSGKYHAVLCIGAVIRGDTS+YDAVVN SASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSYYDAVVNCSASGVLSAGLNS 180

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           GVPC+FSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFE+DLK
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 228

BLAST of Cmc03g0077361 vs. NCBI nr
Match: XP_038884169.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Benincasa hispida])

HSP 1 Score: 400.2 bits (1027), Expect = 1.2e-107
Identity = 207/228 (90.79%), Postives = 215/228 (94.30%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTL+FSNSNF  TQLQFQG+LS+KSQP SFSS+L L N AS  
Sbjct: 1   MAASFAAPAQGLVHRQNLTLAFSNSNFNRTQLQFQGTLSAKSQPFSFSSQLKLPNVASPT 60

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           N+HRSSF  TAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NDHRSSFVQTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           VDVVWVPGSFDIPVVA++LG+SGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS
Sbjct: 121 VDVVWVPGSFDIPVVAERLGRSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           GVPCVFSVLTCD LEQ FDRAGGK GNKGSEGALTAMELASMFEYDLK
Sbjct: 181 GVPCVFSVLTCDNLEQAFDRAGGKAGNKGSEGALTAMELASMFEYDLK 228

BLAST of Cmc03g0077361 vs. ExPASy Swiss-Prot
Match: O80575 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44050 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.4e-65
Identity = 124/194 (63.92%), Postives = 157/194 (80.93%), Query Frame = 0

Query: 36  GSLSSKSQPLSFSSRLN-LLNHASSPNNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGR 95
           GS  +KS  LSFSS  +   +  +     RSSF  TAAVRH+ GSL +  GLRFA+VV R
Sbjct: 34  GSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQTAAVRHVTGSLIRGEGLRFAIVVAR 93

Query: 96  FNEIVTRPMLEGALSTFKSYSVQDEDVDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAV 155
           FNE+VT+ +LEGA+ TFK YSV++ED++V+WVPGSF+I VVAQ LG+SGK+HAVLCIGAV
Sbjct: 94  FNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAV 153

Query: 156 IRGDTSHYDAVVNSSASGVLSAGLNSGVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGAL 215
           IRGDT+HYDAV NS+ASGVLSA +NSGVPC+F VLTC+ ++Q  +R+GGK GNKG+E AL
Sbjct: 154 IRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLTCEDMDQALNRSGGKAGNKGAETAL 213

Query: 216 TAMELASMFEYDLK 229
           TA+E+AS+FE+ LK
Sbjct: 214 TALEMASLFEHHLK 227

BLAST of Cmc03g0077361 vs. ExPASy Swiss-Prot
Match: Q9XH32 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-61
Identity = 130/228 (57.02%), Postives = 164/228 (71.93%), Query Frame = 0

Query: 3   ASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLN--LLNHASSP 62
           ASFAA        Q   L+ + +  KP   Q   +    S PLS SS      L H +S 
Sbjct: 2   ASFAA-------SQTCFLTTNPTCLKPNSPQKSSTFLPFSAPLSSSSSFPGCGLVHVASN 61

Query: 63  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 122
             +R+SF  T AVR + G + KA   RFA+VV RFNE VTR ++EGAL TFK YSV +ED
Sbjct: 62  KKNRASFVVTNAVRELEGYVTKAQSFRFAIVVARFNEFVTRRLMEGALDTFKKYSV-NED 121

Query: 123 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 182
           +DVVWVPG++++ V AQ LG+SGKYHA++C+GAV++GDTSHYDAVVNS++SGVLSAGLNS
Sbjct: 122 IDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVVNSASSGVLSAGLNS 181

Query: 183 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           GVPCVF VLTCD ++Q  +RAGGK GNKG+E ALTA+E+AS+FE+ LK
Sbjct: 182 GVPCVFGVLTCDNMDQAINRAGGKAGNKGAESALTAIEMASLFEHHLK 221

BLAST of Cmc03g0077361 vs. ExPASy Swiss-Prot
Match: A5D1C7 (6,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=ribH PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-39
Identity = 74/150 (49.33%), Postives = 105/150 (70.00%), Query Frame = 0

Query: 75  HIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDVDVVWVPGSFDIPV 134
           H++G      GLRF +V+GRFNE +T  +L GAL     + V D+D++V WVPG+F+IP+
Sbjct: 8   HLIGQ-----GLRFGIVIGRFNEFITNKLLSGALDALNRHGVADQDIEVAWVPGAFEIPM 67

Query: 135 VAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNSGVPCVFSVLTCDTL 194
           VA+K+  + KY AV+C+GAVIRG T H+D V    A GV   GL SGVP +F V+T D++
Sbjct: 68  VARKMASAMKYDAVICLGAVIRGATPHFDYVAGEVAKGVARIGLESGVPTIFGVITADSI 127

Query: 195 EQGFDRAGGKVGNKGSEGALTAMELASMFE 225
           EQ  +RAG K GNKG + A+TA+E+A++ +
Sbjct: 128 EQAIERAGAKAGNKGWDAAVTAIEMANLMK 152

BLAST of Cmc03g0077361 vs. ExPASy Swiss-Prot
Match: A6LSS9 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=ribH PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-38
Identity = 70/138 (50.72%), Postives = 103/138 (74.64%), Query Frame = 0

Query: 85  GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDVDVVWVPGSFDIPVVAQKLGQSGK 144
           GL+F +VVGRFNE +   +LEGA+   K + V++ED+D+ WVPG+F+IP++A+K+ +S K
Sbjct: 12  GLKFGIVVGRFNEFIGGKLLEGAIDGLKRHGVKEEDIDIAWVPGAFEIPLIAKKMAKSPK 71

Query: 145 YHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNSGVPCVFSVLTCDTLEQGFDRAGGK 204
           Y  V+C+GAVI+G TSHYD V +  + G+ S  L SG P +F VLT +T+EQ  +RAG K
Sbjct: 72  YDGVICLGAVIKGSTSHYDYVCSEVSKGIASVSLESGKPVIFGVLTTNTIEQAIERAGTK 131

Query: 205 VGNKGSEGALTAMELASM 223
            GNKG E A++A+E+A++
Sbjct: 132 AGNKGYESAVSAIEMANL 149

BLAST of Cmc03g0077361 vs. ExPASy Swiss-Prot
Match: B7GKI1 (6,7-dimethyl-8-ribityllumazine synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) OX=491915 GN=ribH PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.6e-38
Identity = 75/138 (54.35%), Postives = 101/138 (73.19%), Query Frame = 0

Query: 85  GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDVDVVWVPGSFDIPVVAQKLGQSGK 144
           GL+  +VV RFNE +T  +L GAL   K + V+++ +DV WVPG+F+IP+VA+K+ +S K
Sbjct: 12  GLKIGIVVARFNEFITSKLLSGALDGLKRHGVEEQHIDVAWVPGAFEIPLVAKKMAESKK 71

Query: 145 YHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNSGVPCVFSVLTCDTLEQGFDRAGGK 204
           Y AV+ +GAVIRG TSHYD V N  A G   A L+SGVP +F VLT DT+EQ  +RAG K
Sbjct: 72  YDAVITLGAVIRGATSHYDYVCNEVAKGTSHAALSSGVPVIFGVLTTDTIEQAIERAGTK 131

Query: 205 VGNKGSEGALTAMELASM 223
            GNKG E AL+A+E+A++
Sbjct: 132 AGNKGWEAALSAIEMANV 149

BLAST of Cmc03g0077361 vs. ExPASy TrEMBL
Match: A0A1S3BDY2 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis melo OX=3656 GN=LOC103488575 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS
Sbjct: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYD 227
           GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYD
Sbjct: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYD 226

BLAST of Cmc03g0077361 vs. ExPASy TrEMBL
Match: E7BRS1 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 216/228 (94.74%), Postives = 223/228 (97.81%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTLSFSN NFKPTQLQFQG+LS+KSQPLSFSS+ NLLNH SSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 60

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           NNHRSSFAHTAAVRHI GSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           +DVVWVPGSFDIPVVAQ+LGQSGKYHAVLCIGAVIRGDTSHYDAVVN SASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 180

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           GVPC+FSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFE+DLK
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 228

BLAST of Cmc03g0077361 vs. ExPASy TrEMBL
Match: A0A0A0KGW6 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 GN=Csa_6G366300 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 216/228 (94.74%), Postives = 223/228 (97.81%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTLSFSN NFKPTQLQFQG+LS+KSQPLSFSS+ NLLNH SSP
Sbjct: 36  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 95

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           NNHRSSFAHTAAVRHI GSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 96  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 155

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           +DVVWVPGSFDIPVVAQ+LGQSGKYHAVLCIGAVIRGDTSHYDAVVN SASGVLSAGLNS
Sbjct: 156 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 215

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           GVPC+FSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFE+DLK
Sbjct: 216 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 263

BLAST of Cmc03g0077361 vs. ExPASy TrEMBL
Match: B7SIS4 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.4e-114
Identity = 214/228 (93.86%), Postives = 222/228 (97.37%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MAASFAAPAQGLVHRQNLTLSFSN NFKPTQLQFQG+L +KSQPLSFSS+ NLLNH SSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLPAKSQPLSFSSQFNLLNHPSSP 60

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
           NNHRSSFAHTAAVRHI GSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           +DVVWVPGSFDIPVVAQ+LGQSGKYHAVLCIGAVIRGDTS+YDAVVN SASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSYYDAVVNCSASGVLSAGLNS 180

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           GVPC+FSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFE+DLK
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 228

BLAST of Cmc03g0077361 vs. ExPASy TrEMBL
Match: A0A6J1KRP6 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucurbita maxima OX=3661 GN=LOC111496605 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99
Identity = 193/228 (84.65%), Postives = 206/228 (90.35%), Query Frame = 0

Query: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60
           MA SFA  AQGLV+RQNLTL+FSNSNF  TQLQFQG   +KSQ LSFSS+L L N AS  
Sbjct: 1   MAVSFAGAAQGLVYRQNLTLAFSNSNFNRTQLQFQGQNPAKSQSLSFSSQLKLANDASPR 60

Query: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120
            +HRSSFA T AVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  KHHRSSFAQTDAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180
           +DVVWVPGSFDIPVVA++LG+SGKYHAVLCIGAVIRGDTSHYDAVVNS+ASGVLSAGL S
Sbjct: 121 IDVVWVPGSFDIPVVAERLGRSGKYHAVLCIGAVIRGDTSHYDAVVNSAASGVLSAGLKS 180

Query: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYDLK 229
           G+PCVFSVLT + LEQ FDRAGGK GNKGSEGALTAMELAS+FEYDLK
Sbjct: 181 GIPCVFSVLTTENLEQAFDRAGGKAGNKGSEGALTAMELASVFEYDLK 228

BLAST of Cmc03g0077361 vs. TAIR 10
Match: AT2G44050.1 (6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase )

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-66
Identity = 124/194 (63.92%), Postives = 157/194 (80.93%), Query Frame = 0

Query: 36  GSLSSKSQPLSFSSRLN-LLNHASSPNNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGR 95
           GS  +KS  LSFSS  +   +  +     RSSF  TAAVRH+ GSL +  GLRFA+VV R
Sbjct: 34  GSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQTAAVRHVTGSLIRGEGLRFAIVVAR 93

Query: 96  FNEIVTRPMLEGALSTFKSYSVQDEDVDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAV 155
           FNE+VT+ +LEGA+ TFK YSV++ED++V+WVPGSF+I VVAQ LG+SGK+HAVLCIGAV
Sbjct: 94  FNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAV 153

Query: 156 IRGDTSHYDAVVNSSASGVLSAGLNSGVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGAL 215
           IRGDT+HYDAV NS+ASGVLSA +NSGVPC+F VLTC+ ++Q  +R+GGK GNKG+E AL
Sbjct: 154 IRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLTCEDMDQALNRSGGKAGNKGAETAL 213

Query: 216 TAMELASMFEYDLK 229
           TA+E+AS+FE+ LK
Sbjct: 214 TALEMASLFEHHLK 227

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008445594.12.3e-119100.00PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucu... [more]
KAE8647237.12.6e-11594.74hypothetical protein Csa_018989 [Cucumis sativus][more]
ADQ00634.12.6e-11594.746,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus][more]
NP_001295819.15.0e-11493.866,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Cucumis sativus] >ABZ881... [more]
XP_038884169.11.2e-10790.796,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Benincasa hispida][more]
Match NameE-valueIdentityDescription
O805753.4e-6563.926,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9XH321.3e-6157.026,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea OX=3... [more]
A5D1C72.5e-3949.336,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (stra... [more]
A6LSS92.7e-3850.726,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC... [more]
B7GKI14.6e-3854.356,7-dimethyl-8-ribityllumazine synthase OS=Anoxybacillus flavithermus (strain DS... [more]
Match NameE-valueIdentityDescription
A0A1S3BDY21.1e-119100.006,7-dimethyl-8-ribityllumazine synthase OS=Cucumis melo OX=3656 GN=LOC103488575 ... [more]
E7BRS11.3e-11594.746,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 PE=3 SV=1[more]
A0A0A0KGW61.3e-11594.746,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 GN=Csa_6G3663... [more]
B7SIS42.4e-11493.866,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
A0A6J1KRP61.7e-9984.656,7-dimethyl-8-ribityllumazine synthase OS=Cucurbita maxima OX=3661 GN=LOC111496... [more]
Match NameE-valueIdentityDescription
AT2G44050.12.4e-6663.926,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / ri... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002180Lumazine/riboflavin synthasePFAMPF00885DMRL_synthasecoord: 85..222
e-value: 1.4E-45
score: 154.6
IPR036467Lumazine/riboflavin synthase superfamilyGENE3D3.40.50.960Lumazine/riboflavin synthasecoord: 73..228
e-value: 1.0E-58
score: 199.3
IPR036467Lumazine/riboflavin synthase superfamilySUPERFAMILY52121Lumazine synthasecoord: 78..224
IPR034964Lumazine synthaseTIGRFAMTIGR00114TIGR00114coord: 86..222
e-value: 2.9E-40
score: 135.5
IPR034964Lumazine synthasePANTHERPTHR210586,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASEcoord: 19..228
IPR034964Lumazine synthaseHAMAPMF_00178Lumazine_synthcoord: 81..226
score: 26.650753
IPR034964Lumazine synthaseCDDcd09209Lumazine_synthase-Icoord: 88..220
e-value: 1.31393E-69
score: 207.682
NoneNo IPR availablePANTHERPTHR21058:SF16,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASEcoord: 19..228

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc03g0077361.1Cmc03g0077361.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009231 riboflavin biosynthetic process
cellular_component GO:0009349 riboflavin synthase complex
molecular_function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function GO:0042802 identical protein binding