Cmc03g0077171 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTTCGTAATTCTGGATCGAAAGCCATTTTTCGGCAGCCATCACTTCATTCAGATTCCGGATATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTCTAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGTCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAGG TTTGTTCGTAATTCTGGATCGAAAGCCATTTTTCGGCAGCCATCACTTCATTCAGATTCCGGATATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTCTAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGTCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAGG ATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTCTAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGTCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAG MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTRRIDDFFRRPTKTTSAETNES Homology
BLAST of Cmc03g0077171 vs. NCBI nr
Match: XP_008445504.1 (PREDICTED: dr1-associated corepressor [Cucumis melo]) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cmc03g0077171 vs. NCBI nr
Match: KAA0064731.1 (dr1-associated corepressor [Cucumis melo var. makuwa]) HSP 1 Score: 260.8 bits (665), Expect = 6.9e-66 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Cmc03g0077171 vs. NCBI nr
Match: XP_004144200.1 (DNA polymerase epsilon subunit C [Cucumis sativus] >KGN47612.1 hypothetical protein Csa_018931 [Cucumis sativus]) HSP 1 Score: 242.3 bits (617), Expect = 2.5e-60 Identity = 130/137 (94.89%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of Cmc03g0077171 vs. NCBI nr
Match: XP_038884228.1 (NCT transcriptional regulatory complex subunit A [Benincasa hispida]) HSP 1 Score: 240.7 bits (613), Expect = 7.4e-60 Identity = 128/140 (91.43%), Postives = 130/140 (92.86%), Query Frame = 0
BLAST of Cmc03g0077171 vs. NCBI nr
Match: XP_022997291.1 (DNA polymerase epsilon subunit C [Cucurbita maxima]) HSP 1 Score: 239.2 bits (609), Expect = 2.2e-59 Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy Swiss-Prot
Match: B0XTT5 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=nctA PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.9e-08 Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy Swiss-Prot
Match: Q4X095 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=nctA PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.9e-08 Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy Swiss-Prot
Match: Q9W256 (DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06 Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy Swiss-Prot
Match: Q14919 (Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3) HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06 Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy TrEMBL
Match: A0A1S3BDL4 (dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 5.2e-67 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy TrEMBL
Match: A0A5A7VG98 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00350 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 3.3e-66 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy TrEMBL
Match: A0A0A0KGV1 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G365140 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60 Identity = 130/137 (94.89%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy TrEMBL
Match: A0A6J1K737 (DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.0e-59 Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0
BLAST of Cmc03g0077171 vs. ExPASy TrEMBL
Match: A0A6J1HCT3 (DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 6.8e-59 Identity = 124/140 (88.57%), Postives = 130/140 (92.86%), Query Frame = 0
BLAST of Cmc03g0077171 vs. TAIR 10
Match: AT5G43250.1 (nuclear factor Y, subunit C13 ) HSP 1 Score: 149.8 bits (377), Expect = 1.6e-36 Identity = 89/139 (64.03%), Postives = 103/139 (74.10%), Query Frame = 0
BLAST of Cmc03g0077171 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 ) HSP 1 Score: 55.8 bits (133), Expect = 3.1e-08 Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Cmc03g0077171 vs. TAIR 10
Match: AT1G07980.1 (nuclear factor Y, subunit C10 ) HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07 Identity = 28/91 (30.77%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Cmc03g0077171 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein ) HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07 Identity = 34/105 (32.38%), Postives = 58/105 (55.24%), Query Frame = 0
BLAST of Cmc03g0077171 vs. TAIR 10
Match: AT5G27910.1 (nuclear factor Y, subunit C8 ) HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06 Identity = 39/106 (36.79%), Postives = 56/106 (52.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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