Cmc03g0077101 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0077101
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	leucine-rich repeat extensin-like protein 3
Location	CMiso1.1chr03: 24164788 .. 24165958 (+)
RNA-Seq Expression	Cmc03g0077101
Synteny	Cmc03g0077101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGTTTCGATTGAATTTCAAAAACTATATTTTTCAGTAGAAATAGTTTAAAATTAAATACGCATTCGTTATCAAATAGTTTATTTTTTTCGATGACTTATATTTTAAATTTAATCATCGAACCTGTATTCCAAACACATTTATGGAATCCGATTAAGGAAGATTAATGGAATCCGAGTACAAGTGTATAAGAAGGCAAACAAAAAAAAAATTGAAGTGTAAAAGTGCAATGAAGGCAAATTCATAACCAACCCCCTTTGTTCTAACTCTTCTTCTCCACTTCAATTCCCTCCTCTTCTTATTCATTACGAAGCTTCCTCTTTTCCACAGCCTATTCATCCATGGAACATTTCTCCAAAACCCTCCATTTCTCTTCCATTCTCATTCTTCTTATCCTCCCCCTCGCTGGGGCGGCGCCCGAGGACGGCCGTGTCGTCCAGGTCGTTCCTCCGGTTAGCCTACTTTGTATCAGCGAATGTTCAACTTGTCCCACCATTTGCGCTCCACCACCGCCACCGCCCACTGTGCTCAAGTCACCTCCGCCGGTGCCTCACGTGCCACCACTGGCTTACTTTCCACTCAATTCACCCCCACCTCGACCAACCTCATCTCCACCCCCGCCGTCGCCTTCACCTCCGCCACCTCCGGCTACGGCGACGGCGGTTTCTTCTCATTCCCCGCCACCACCCGCATTCAGATATTACTTCAACTTGCCACCACCACCGCCAGTGCTGATTCCGGTACCTGTGCCGCCGTCGGCGACTGCTGCACCTCGTGGAAATACGAATAGTAATGCTTATAATTACTACTTTTATGCTCCGGCATCATCGTCTGCTCCTCCGTCTCTTCCGACGGCGTTTTTTTGGGGTTTGTTTCTCTTCCACTTGATCTTGTGTTCATGGTGAAAGGTTTGTATATTAATTTTCATGGAGGTATGGGGTGAAGAAAACTTTGATTGGGACTCTCTTAATTAATTGGCTTAATTGTAACTAAGGGTTTATTGTTTTGGTTAGTCGAATTTTGGGAATTATTATTTTTTAAAGTTTGGATTTTTTTTTTCTTTTTGATTTGAAATTAAAGCATAGTGATTTTCAAGTGCCTAATGGGTTATGTAAATCTATAAACATTTGTGTTTTTTATTTGAATTGTGTACTGATCTCATATTTAGTA

mRNA sequence

TCTTGTTTCGATTGAATTTCAAAAACTATATTTTTCAGTAGAAATAGTTTAAAATTAAATACGCATTCGTTATCAAATAGTTTATTTTTTTCGATGACTTATATTTTAAATTTAATCATCGAACCTGTATTCCAAACACATTTATGGAATCCGATTAAGGAAGATTAATGGAATCCGAGTACAAGTGTATAAGAAGGCAAACAAAAAAAAAATTGAAGTGTAAAAGTGCAATGAAGGCAAATTCATAACCAACCCCCTTTGTTCTAACTCTTCTTCTCCACTTCAATTCCCTCCTCTTCTTATTCATTACGAAGCTTCCTCTTTTCCACAGCCTATTCATCCATGGAACATTTCTCCAAAACCCTCCATTTCTCTTCCATTCTCATTCTTCTTATCCTCCCCCTCGCTGGGGCGGCGCCCGAGGACGGCCGTGTCGTCCAGGTCGTTCCTCCGGTTAGCCTACTTTGTATCAGCGAATGTTCAACTTGTCCCACCATTTGCGCTCCACCACCGCCACCGCCCACTGTGCTCAAGTCACCTCCGCCGGTGCCTCACGTGCCACCACTGGCTTACTTTCCACTCAATTCACCCCCACCTCGACCAACCTCATCTCCACCCCCGCCGTCGCCTTCACCTCCGCCACCTCCGGCTACGGCGACGGCGGTTTCTTCTCATTCCCCGCCACCACCCGCATTCAGATATTACTTCAACTTGCCACCACCACCGCCAGTGCTGATTCCGGTACCTGTGCCGCCGTCGGCGACTGCTGCACCTCGTGGAAATACGAATAGTAATGCTTATAATTACTACTTTTATGCTCCGGCATCATCGTCTGCTCCTCCGTCTCTTCCGACGGCGTTTTTTTGGGGTTTGTTTCTCTTCCACTTGATCTTGTGTTCATGGTGAAAGGTTTGTATATTAATTTTCATGGAGGTATGGGGTGAAGAAAACTTTGATTGGGACTCTCTTAATTAATTGGCTTAATTGTAACTAAGGGTTTATTGTTTTGGTTAGTCGAATTTTGGGAATTATTATTTTTTAAAGTTTGGATTTTTTTTTTCTTTTTGATTTGAAATTAAAGCATAGTGATTTTCAAGTGCCTAATGGGTTATGTAAATCTATAAACATTTGTGTTTTTTATTTGAATTGTGTACTGATCTCATATTTAGTA

Coding sequence (CDS)

ATGGAACATTTCTCCAAAACCCTCCATTTCTCTTCCATTCTCATTCTTCTTATCCTCCCCCTCGCTGGGGCGGCGCCCGAGGACGGCCGTGTCGTCCAGGTCGTTCCTCCGGTTAGCCTACTTTGTATCAGCGAATGTTCAACTTGTCCCACCATTTGCGCTCCACCACCGCCACCGCCCACTGTGCTCAAGTCACCTCCGCCGGTGCCTCACGTGCCACCACTGGCTTACTTTCCACTCAATTCACCCCCACCTCGACCAACCTCATCTCCACCCCCGCCGTCGCCTTCACCTCCGCCACCTCCGGCTACGGCGACGGCGGTTTCTTCTCATTCCCCGCCACCACCCGCATTCAGATATTACTTCAACTTGCCACCACCACCGCCAGTGCTGATTCCGGTACCTGTGCCGCCGTCGGCGACTGCTGCACCTCGTGGAAATACGAATAGTAATGCTTATAATTACTACTTTTATGCTCCGGCATCATCGTCTGCTCCTCCGTCTCTTCCGACGGCGTTTTTTTGGGGTTTGTTTCTCTTCCACTTGATCTTGTGTTCATGGTGA

Protein sequence

MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPPTVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLFLFHLILCSW

Homology

[Close]

BLAST of Cmc03g0077101 vs. NCBI nr
Match: KAA0064726.1 (classical arabinogalactan protein 9-like [Cucumis melo var. makuwa])

HSP 1 Score: 357.8 bits (917), Expect = 5.5e-95
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP 60
           MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP 60

Query: 61  TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY 120
           TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY
Sbjct: 61  TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY 120

Query: 121 YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLFLF 180
           YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLFLF
Sbjct: 121 YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLFLF 180

Query: 181 HLILCSW 188
           HLILCSW
Sbjct: 181 HLILCSW 187

[Close]

BLAST of Cmc03g0077101 vs. NCBI nr
Match: XP_011657382.1 (extensin [Cucumis sativus] >KGN47605.1 hypothetical protein Csa_018938 [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 4.3e-87
Identity = 177/189 (93.65%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICA--PPPP 60
           MEHFSKTLHFSSILILLIL LA A PEDGRVV+VVPPVSLLCISECSTCPTICA  PPPP
Sbjct: 1   MEHFSKTLHFSSILILLILRLARAVPEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPP 60

Query: 61  PPTVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAF 120
           PP VLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPP PSPPPPPATATAVSSHSPPPPAF
Sbjct: 61  PPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPWPSPPPPPATATAVSSHSPPPPAF 120

Query: 121 RYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLF 180
           RYYFNLPPPPPVLIPVPVPPSATA P GNTNSNAYNYYFYAPASSSAPPSLPTA FWGLF
Sbjct: 121 RYYFNLPPPPPVLIPVPVPPSATAGPHGNTNSNAYNYYFYAPASSSAPPSLPTALFWGLF 180

Query: 181 LFHLILCSW 188
           LFHL+LCSW
Sbjct: 181 LFHLMLCSW 189

[Close]

BLAST of Cmc03g0077101 vs. NCBI nr
Match: XP_008445508.1 (PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo])

HSP 1 Score: 328.2 bits (840), Expect = 4.7e-86
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP 60
           MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP 60

Query: 61  TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY 120
           TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY
Sbjct: 61  TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY 120

Query: 121 YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF 175
           YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF
Sbjct: 121 YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF 174

[Close]

BLAST of Cmc03g0077101 vs. NCBI nr
Match: XP_022132157.1 (leucine-rich repeat extensin-like protein 3 [Momordica charantia])

HSP 1 Score: 211.5 bits (537), Expect = 6.4e-51
Identity = 128/190 (67.37%), Postives = 139/190 (73.16%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAG--AAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPP 60
           MEHF +  HFS + ILLI+ LAG  AA ED R+V+VVPPVSLLCISECSTCP IC+PPPP
Sbjct: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60

Query: 61  PPTVLKSPPPVPHVPPLAYFPLNSPP-PRPTSSPPPPSPSPPPPPATATAVSSHSPPPPA 120
           P   LKSPP  PH PPLAY PLN+PP P P    P PSP PPPPP+   A  SH PPPPA
Sbjct: 61  PTAALKSPP--PHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPA 120

Query: 121 FRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGL 180
           F YYFNLPPPPPVLIPVPVPP  TAAP GNTNSNAYNYYFYA  SSS   SLP  +   L
Sbjct: 121 FNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWLCAL 180

Query: 181 FLFHLILCSW 188
           F+F  +   W
Sbjct: 181 FVFQFMFSCW 185

[Close]

BLAST of Cmc03g0077101 vs. NCBI nr
Match: XP_023536686.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-47
Identity = 127/185 (68.65%), Postives = 140/185 (75.68%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAG--AAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPP 60
           MEH + T  F    ILLI PLAG   A +D R+V+VVPPVSLLCISECSTCP ICAPPPP
Sbjct: 1   MEHSTTTTLF---FILLIFPLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPP 60

Query: 61  PPTVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAF 120
           P   LKSPPPVPH PP+A FPLN PP     SPP P+PSPPPPP  A A SSHSPPPPAF
Sbjct: 61  PTVTLKSPPPVPHSPPMASFPLNPPP-----SPPRPTPSPPPPPVPA-ATSSHSPPPPAF 120

Query: 121 RYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLF 180
           +YYF+LPPPPPVLIP P+PP+ TAAP GNT  NAYNYYFY  AS+S   + P AF W LF
Sbjct: 121 KYYFSLPPPPPVLIPEPLPPT-TAAPHGNT--NAYNYYFY--ASNSCSLNSP-AFLWALF 170

Query: 181 LFHLI 184
           LFHL+
Sbjct: 181 LFHLV 170

[Close]

BLAST of Cmc03g0077101 vs. ExPASy Swiss-Prot
Match: O65375 (Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRX1 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 9.4e-05
Identity = 53/135 (39.26%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 50  PTICAPPPPPPTVLKSPPPVPHV---PPLAYFPLNSPPPRPTSSPPPPSPSP-------- 109
           P + + PPPPP V  SPPP P+V   PP  Y   + PPP   SSPPPP PSP        
Sbjct: 478 PYVYSSPPPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPYVYSSPPPPPPSPPPPCPESS 537

Query: 110 PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFY 169
           PPPP    A  + SPPPP+  YY  +   PP   PV  PP   + P  +         +Y
Sbjct: 538 PPPPVVYYAPVTQSPPPPSPVYYPPVTQSPPPPSPVYYPPVTNSPPPPSP-------VYY 597

Query: 170 APASSSAPPSLPTAF 174
            P + S PP  P  +
Sbjct: 598 PPVTYSPPPPSPVYY 605

[Close]

BLAST of Cmc03g0077101 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 50/102 (49.02%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 47  STCPTICAPPPP-PPTVLKSPPPVPHVPPLAYF---PLNSPPPRPTSSPPPPSPSPPPPP 106
           ST PT+ +PPPP PP  + SPPP P  PP  Y    P   PPP P  SPPPP P PPPPP
Sbjct: 418 STPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPP 477

Query: 107 ATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSATAAP 145
                   +SPPPP+       PPPPPV  P P PP     P
Sbjct: 478 PV------YSPPPPS-----PPPPPPPVYSPPPPPPPPPPPP 508

[Close]

BLAST of Cmc03g0077101 vs. ExPASy TrEMBL
Match: A0A5A7VEH7 (Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00300 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.7e-95
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP 60
           MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP 60

Query: 61  TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY 120
           TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY
Sbjct: 61  TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY 120

Query: 121 YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLFLF 180
           YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLFLF
Sbjct: 121 YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLFLF 180

Query: 181 HLILCSW 188
           HLILCSW
Sbjct: 181 HLILCSW 187

[Close]

BLAST of Cmc03g0077101 vs. ExPASy TrEMBL
Match: A0A0A0KD44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87
Identity = 177/189 (93.65%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICA--PPPP 60
           MEHFSKTLHFSSILILLIL LA A PEDGRVV+VVPPVSLLCISECSTCPTICA  PPPP
Sbjct: 1   MEHFSKTLHFSSILILLILRLARAVPEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPP 60

Query: 61  PPTVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAF 120
           PP VLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPP PSPPPPPATATAVSSHSPPPPAF
Sbjct: 61  PPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPWPSPPPPPATATAVSSHSPPPPAF 120

Query: 121 RYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLF 180
           RYYFNLPPPPPVLIPVPVPPSATA P GNTNSNAYNYYFYAPASSSAPPSLPTA FWGLF
Sbjct: 121 RYYFNLPPPPPVLIPVPVPPSATAGPHGNTNSNAYNYYFYAPASSSAPPSLPTALFWGLF 180

Query: 181 LFHLILCSW 188
           LFHL+LCSW
Sbjct: 181 LFHLMLCSW 189

[Close]

BLAST of Cmc03g0077101 vs. ExPASy TrEMBL
Match: A0A1S3BCX5 (classical arabinogalactan protein 9-like OS=Cucumis melo OX=3656 GN=LOC103488504 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.3e-86
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP 60
           MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPP 60

Query: 61  TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY 120
           TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY
Sbjct: 61  TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRY 120

Query: 121 YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF 175
           YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF
Sbjct: 121 YFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF 174

[Close]

BLAST of Cmc03g0077101 vs. ExPASy TrEMBL
Match: A0A6J1BT26 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111005088 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 3.1e-51
Identity = 128/190 (67.37%), Postives = 139/190 (73.16%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAG--AAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPP 60
           MEHF +  HFS + ILLI+ LAG  AA ED R+V+VVPPVSLLCISECSTCP IC+PPPP
Sbjct: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60

Query: 61  PPTVLKSPPPVPHVPPLAYFPLNSPP-PRPTSSPPPPSPSPPPPPATATAVSSHSPPPPA 120
           P   LKSPP  PH PPLAY PLN+PP P P    P PSP PPPPP+   A  SH PPPPA
Sbjct: 61  PTAALKSPP--PHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPA 120

Query: 121 FRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGL 180
           F YYFNLPPPPPVLIPVPVPP  TAAP GNTNSNAYNYYFYA  SSS   SLP  +   L
Sbjct: 121 FNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWLCAL 180

Query: 181 FLFHLILCSW 188
           F+F  +   W
Sbjct: 181 FVFQFMFSCW 185

[Close]

BLAST of Cmc03g0077101 vs. ExPASy TrEMBL
Match: A0A6J1GGS2 (extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.1e-46
Identity = 125/185 (67.57%), Postives = 139/185 (75.14%), Query Frame = 0


Query: 1   MEHFSKTLHFSSILILLILPLAGA--APEDGRVVQVVPPVSLLCISECSTCPTICAPPPP 60
           MEH + T  F    ILLI+ LAGA  A ++ R+V+VVPPVSLLCISECSTCP ICAPPPP
Sbjct: 1   MEHSTTTTLF---FILLIVHLAGAAMASDNHRLVEVVPPVSLLCISECSTCPVICAPPPP 60

Query: 61  PPTVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAF 120
           P   LKSPPPVPH PP+A FPLN PP     SPP PSPSPPPPP    A SSHSPPPPAF
Sbjct: 61  PTVTLKSPPPVPHSPPMASFPLNPPP-----SPPRPSPSPPPPP-VPVAASSHSPPPPAF 120

Query: 121 RYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLF 180
           +YYF+LPPPPPVLIP P+PP+ TAAP GNT  NAYNYYFY  AS+S   + P  F W LF
Sbjct: 121 KYYFSLPPPPPVLIPEPLPPT-TAAPHGNT--NAYNYYFY--ASNSCSLNSP-VFLWALF 170

Query: 181 LFHLI 184
           LFHL+
Sbjct: 181 LFHLV 170

[Close]

BLAST of Cmc03g0077101 vs. TAIR 10
Match: AT5G11990.1 (proline-rich family protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.8e-09
Identity = 73/183 (39.89%), Postives = 96/183 (52.46%), Query Frame = 0


Query: 13  ILILLILPLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPPTVLKSPPPVPHV 72
           I+ L+++ +  ++P D     V+ P   LCISECSTCPTIC+PPP  P+   SPPP P +
Sbjct: 7   IIALVMVMVVASSPSD--QTNVLTP---LCISECSTCPTICSPPPSKPSPSMSPPPSPSL 66

Query: 73  PPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLI 132
           P  +  P   PPP    SPPP S S  PPP     ++   PPPP F YYF   PPPP L 
Sbjct: 67  PLSSSPP---PPPPHKHSPPPLSQSLSPPP----LITVIHPPPPRF-YYFESTPPPPPLS 126

Query: 133 P-----VPVPPSATAAPRGNTNSN---AYNY-YFYAPASSSAPPSLPTAFFWGLFLFHLI 187
           P      P  PS+  +P+G +       Y + YFY   +S+A     T  F   FL  L+
Sbjct: 127 PDGKGSPPSVPSSPPSPKGQSQGQQQPPYPFPYFYFYTASNA-----TLLFSSSFLIALV 171

[Close]

BLAST of Cmc03g0077101 vs. TAIR 10
Match: AT1G12040.1 (leucine-rich repeat/extensin 1 )

HSP 1 Score: 48.5 bits (114), Expect = 6.7e-06
Identity = 53/135 (39.26%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 50  PTICAPPPPPPTVLKSPPPVPHV---PPLAYFPLNSPPPRPTSSPPPPSPSP-------- 109
           P + + PPPPP V  SPPP P+V   PP  Y   + PPP   SSPPPP PSP        
Sbjct: 478 PYVYSSPPPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPYVYSSPPPPPPSPPPPCPESS 537

Query: 110 PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFY 169
           PPPP    A  + SPPPP+  YY  +   PP   PV  PP   + P  +         +Y
Sbjct: 538 PPPPVVYYAPVTQSPPPPSPVYYPPVTQSPPPPSPVYYPPVTNSPPPPSP-------VYY 597

Query: 170 APASSSAPPSLPTAF 174
            P + S PP  P  +
Sbjct: 598 PPVTYSPPPPSPVYY 605

[Close]

BLAST of Cmc03g0077101 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 48.1 bits (113), Expect = 8.8e-06
Identity = 50/102 (49.02%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 47  STCPTICAPPPP-PPTVLKSPPPVPHVPPLAYF---PLNSPPPRPTSSPPPPSPSPPPPP 106
           ST PT+ +PPPP PP  + SPPP P  PP  Y    P   PPP P  SPPPP P PPPPP
Sbjct: 418 STPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPP 477

Query: 107 ATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSATAAP 145
                   +SPPPP+       PPPPPV  P P PP     P
Sbjct: 478 PV------YSPPPPS-----PPPPPPPVYSPPPPPPPPPPPP 508

[Close]

BLAST of Cmc03g0077101 vs. TAIR 10
Match: AT2G15880.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 54/130 (41.54%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 50  PTICAPPPP---PPTVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATAT 109
           P + +PPPP   PP  + SPPP  H PP    P++SPPP P  SPPPP  SPPPPP  + 
Sbjct: 540 PPVHSPPPPVHSPPPPVHSPPPPVHSPPP---PVHSPPP-PVHSPPPPVYSPPPPPVHSP 599

Query: 110 AVSSHSPPPPAFR---YYFNLPPPPPVLIPVP---VPPSATAAPRGNTNSNAYNYYFYAP 169
               HSPPPP        ++ PPPPPV  P P    PP    +P     S     Y   P
Sbjct: 600 PPPVHSPPPPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSPPP 659

Query: 170 ASSSAPPSLP 171
               +PP  P
Sbjct: 660 PPVKSPPPPP 665

[Close]

BLAST of Cmc03g0077101 vs. TAIR 10
Match: AT1G26250.1 (Proline-rich extensin-like family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.7e-04
Identity = 53/127 (41.73%), Postives = 62/127 (48.82%), Query Frame = 0


Query: 20  PLAGAAPEDGRVVQVVPPVSLLCISECSTCPTICAPPPPPPTVLKSPPPVPHV---PPLA 79
           P   ++P     V   PP            P + +PPPPPP V +SPPP P+V   PP  
Sbjct: 134 PYVYSSPPPPPYVYSSPPPPPYVYKSPPPPPYVYSPPPPPPYVYQSPPPPPYVYSSPPPP 193

Query: 80  YFPLNSPPPRP--TSSPPPPS---PSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVL 139
            +   SPPP P   SSPPPP     SPPPPP     V S  PPPP   Y +  PPPPP +
Sbjct: 194 PYVYKSPPPPPYVYSSPPPPPYVYKSPPPPP----YVYSSPPPPP---YVYKSPPPPPYV 253

The following BLAST results are available for this feature:

BLAST of Cmc03g0077101 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064726.1	5.5e-95	100.00	classical arabinogalactan protein 9-like [Cucumis melo var. makuwa]	[more]
XP_011657382.1	4.3e-87	93.65	extensin [Cucumis sativus] >KGN47605.1 hypothetical protein Csa_018938 [Cucumis ...	[more]
XP_008445508.1	4.7e-86	100.00	PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo]	[more]
XP_022132157.1	6.4e-51	67.37	leucine-rich repeat extensin-like protein 3 [Momordica charantia]	[more]
XP_023536686.1	3.3e-47	68.65	leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc03g0077101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65375	9.4e-05	39.26	Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9T0K5	1.2e-04	49.02	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of Cmc03g0077101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEH7	2.7e-95	100.00	Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0KD44	2.1e-87	93.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1	[more]
A0A1S3BCX5	2.3e-86	100.00	classical arabinogalactan protein 9-like OS=Cucumis melo OX=3656 GN=LOC103488504...	[more]
A0A6J1BT26	3.1e-51	67.37	leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1GGS2	5.1e-46	67.57	extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1	[more]

BLAST of Cmc03g0077101 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11990.1	3.8e-09	39.89	proline-rich family protein	[more]
AT1G12040.1	6.7e-06	39.26	leucine-rich repeat/extensin 1	[more]
AT4G13340.1	8.8e-06	49.02	Leucine-rich repeat (LRR) family protein	[more]
AT2G15880.1	1.3e-04	41.54	Leucine-rich repeat (LRR) family protein	[more]
AT1G26250.1	3.7e-04	41.73	Proline-rich extensin-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0077101.1	Cmc03g0077101.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane