Cmc03g0075181 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0075181
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Glycine-rich RNA-binding family protein
Location	CMiso1.1chr03: 22605817 .. 22610471 (-)
RNA-Seq Expression	Cmc03g0075181
Synteny	Cmc03g0075181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTTAAATTTTTTTTTTCTTTTTTTTGCCGTTTATCTAAACACATGTCCATCACCAGAAAAGAAAAGAGTAAAGCCCAAGCCCAAGCTGAAATCAACTTTGAATTTAGTACGGACGGCGGAATAACTCGACCACGGACCTTAGACGCTAGGGTTTAAACGTTGGACCCTAAAAACCCTCAACCTTTTGGAGCTCATTGCTTCACTGCACATCACAAAGGTAAGTGTTAATTCTTTTCTATTTTTGCAACTCTTCAATTTTGATTTGAAATTGCCCATGTTGAATCCAACCAAGATGCTCCAGTTCTTTTTTTCTCAGTTTGTCTTATTCAGTTTTCGCTTCTGTCTCCGGTTTTCTGCAGGAATTTTATCTGATTGATAGTTGAAAACGGTAATGGCTGCGAAAGACGAGTTTCGAATATTTGTTGGAGGCCTCTCATGGAACATCTCAGAGTGTCAGCTCGAAAACGCTTTCAATCGCTTCGGAAAAATTCTCGAAACTCAAGTAAACTTTCGTTTTCTTTTTCTTTCTTTTTTCGTTATATGACGCCTCGTATTTGTTCATCAGTCTGTGGAATATTATGAAAATGTTTCGACATGCATGTGGTAGAAGATGAGCAATCTAATGTATTTTCTTAGCCAAGACTATCAAAGATGTGAAACCCTTGATTTTTTTATTTTTTATTTTTCAATGAAGATACCTGCTATTATTTGACGGTATTCCTTGCATTTTATGGGTTTTCCTTCTCTACACTGCATGCCAATTGAATTTTATTAGTTGTGTGAGTTTTGTTTATAATCTTATGTTTCTTATTTGTTTATAAATAAAAAAGTTTGCACATGAACGTTGGATGAAATTTCAAGATGTATTGATTTATTTAAGTTACATGAATCTGAATTATTCAGATCAGTTGTACTTACAAGATTATAGCAAATAGTTTGTTTCAGACTTTCTCTTTCTTACCATCCTTTGATCTTTTGTCCTGTAGAATATGGTTCAGGGAGTCAGCTTAAAGCTTAATACATGGATCTGTTCGTACATTTTCTACTGAATTCTTTCATAAAGTTAAGGAAATGGTGTTAGTAGACAAGAAATCTATCCATCAGTATACTTACATTGGAAGAAATTGGTTGAAATCTGATGGTTTTTTGTGTGAAAAACGTTGTCACAATAATGTTTCAGAAATTTTACTTGGTCCCCTCTCTTAGGATATCTGGGGACAAGAACAAACTTGGCACAATTTTTGAAAATTGATCAAGACTCTTTTCTCCCAAAACTAAAATTTTTGTGTCCAACATACGGTTTGTTGATGTAGTTTCCTACTCGTCAAAGTATATGAGAACGCAACACTTGTATTTCATGGAGATGTATCTGAGTGGGGTTCTCTTGGTCATCTTGCTGTCATTTGTTGTTAGTACACTGCACTTCACGACAATCCAGAGATTAGATTTGGGCATAAGTTATATTGAACAGATGCTTCTAGGATTCTTAAGGTTCATATTTTTTTAAAAAAAAAAACTATTTACACTGGGCCTCCTTGTTAAGAGATTTTGCACAGTTGTCCTCAATAGCATTGAAGATATATTTAACTTGATTTTATTGCCTAATGCATCTACAGAGTTTGATTATTTTCTTGCTCCATCAGTGTAAATATTGAATAAATGCATTCAAGGTGAGTACATTTTCACCTGCCTTGCTGTTGGCATACTGTCTAGGATTCCTACTTGGCTTTTCTCTGTGAATTGGGAACTTCTTATAACCAAATTAGAATTTACGGTTCTAGACTTCTAGTGCTTCTGTATGTTCAGGATTTGTTTTGGGTGCTTGGCTATGGAAGGAAGCTATTGTTAAAAACATTTTAGAGTTAGTTCACCAGAGAAAATGTGAGACATTGTATTGAAATTACCATTAGATGTCAGCACCAGCTTGTTTTGTTTTAGATGACCAGACTTTGCTGTAAATTGAATTAAATCGTGGAGATGACACCAGAATGCAGAAGAATCTGAAAATTGATTTTGCTGTATGGTTGTTCAATGAAATATCGAGGAGGAACTCAGTTTATATGGATAAGCTAAGAATTGCATTTCAGGCGAGGAATGTTATTAATGCATTGTTGTACTTGCTACGGTAATGAATTGGGTGGTGGTGTGATGTCGAGAAATACTATGGCAAAAAATTATATCTCCCCAAGATTTTCTTCTTCTTGATTTTCTCATGTTCTGGGTTCTGGACTCTAGAGTGAGTGAATTATTTGCCTGGGCTATTATTTTATTTTACCTTTTGGATAAGAAACAATTTTTTTTCCGACTGGGTTATGAAAAATGGAATATTTTCTGAATGCTGGTTAATCATCTCAATTAATTAGGGCTGTGCAATGGTGGTGGAGTAATTTCAGCAGATCAATAGAAATGTTGTCTTGGGTAATCATCTTAATGGATGACGTTCTTTTTAGCTTAAAGAGATTAAGATCCTGACTTTTTCATGGAACATTTCCTAGTTTGCACCCAAAGAGGTTGTGGGTATTGAGGTTAAATTTGCTCTTTAATGATAGATTTTAAGTCTTGAAGGCAACTTGTGTAACAAGGTTCAAGTTGTTGGACACACTGTAGAGGTTTGAAGGGAAAACGGAATCCTTCCAAGTATATCATTTAATTTCTCTTTAAATGATTTGCTTGGTAGGAAAAGTAAGTTGTCAAGAATTTTAATTGTATTCCACAAATTATATTCCCTGAATAACTATAAAACTTTTTCAGTCAGTCTGTTGGACGTGTACTGTGAACTAATTTAATACTGATTCACCTTTAATAATGAAAAATTGTTGGATGAGCTTCTCTTTTGATGTTTTTATGTAGATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTCGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGATGCAATCAGAGAGATGCATGGCCAGGAGCTTCGTGAGTGGATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGATGATGATACCGAGCCAGGCTTCAGGGGAGGAGGTTATTCATCTAGTGGTAGGGCTAGTTTTGGGAGAGGAAAAGATAAATCTGTGAGGCAGGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTATCCCTCTGTCAGTGGTGAACGTGGTGGGGGTAGAGGTTCATTTTCATCACGTTCTCAATTTGACAGTGATGGCCGTGGGGATCGTTTTGGAGGAGACCGTGATCGATATGTGGATGACCGTTATAATGGAGGGGCGATATGGTGATAGAGATCGTTTTGATCGTAGAGAAGACAAGTATGGAAGTCGAGACCGCTACTTCGACGACAGGTTGTTTTACATCCTTTCTTTGTTTTAATAACAATTACAATAGTGATCTACATGTGTTAACACCCATTCCAACTTTTCGTACTCGTACATTTGCTTTGAATTATGATTTGATTGACATGTTATTGAAATTTTGGCAATTCTATGCAAACTCTGCAGGTACCCATCTGCTGGAGATCGCTTTACTAGTAGTGATAGGTATGATGTTAGTAATCGTTATCCTCAGAATGGCTACGTCAAAGACCGCGGCTACGATAGGGATATTGGTCCAAGGAGTGGCAGTGATAGGTATGGTAGCGGAGGTCCTGGCCGGTTGGGTTTTATGTCTTAAAACTCGTAGATAGTAAATATAATTTTGGTTCCTTATTATATTTTCTATCAGAAAAAATTTTCTCTAAGAAAAGTTCCCTTATTCCAATTTTGGTTCCCACAAACCATCTCAATCAGAGAATAAGAAGGTTTCCAAGTGTTGGTGCCCCAAAATTTAGTGATTGGTAGATTCAGAGTCGTCAACGAGCGTAAGTTTTTTCTTCTCTGCATTTTTCTTCAAAGCATGTTTAACCATAAAAATTGTTTTTTTTTTTTTGCCAATGTATTGGTATTTTTAAGGTTCCAATTAAAATTGAGTTTTTGTAATTCTTCCGCTGTAAAGGGTTTTCATCCCTTCATGGCTGTCATGAGGGCAGAAGTTATAGATAGGACAGGTCCTTACGATCGCCCAAGCAGGGTGGGACGACCATCTTTCTACGACCGCTATTAAAATTCAAATATATGTATATCGATAGTTGTTGGTTAACATTTGCAAATCATTCTAGCTAGGATATGCACTTGCAAAGAACTGGCAGTTTTTATTGCTTTTGAAAATATTTAGTAATAGAAATTTTGGGATGTTACAACTTACAATAACTAATATCTAATGTTTGTAGGCAGGTTCTAACTCTACCTCCAGCCTCAGATATTTTAGTTCTCAATGTGGTGAATTACTCCGCTACCCCTGTTGACTTTGATTTGTTCTTTTCTTAGGAACTGAAGACAATTGACCCAACTTTCATTTTCTTGAATCTCTGAATTCATTATTTAAAAGATCTTTATCTTTATATGGAAAAATATTGTTGAATGTTATTTATTTATAAGACCAAAGACTAATGCTGATTCTTTGGCATTTTGTCAAATATGTAGGACTGTCGATTGAGAAAACCATTGCTGTATTGTGATAACCATTGACTCCTATCTTGCCTCTCACGACTCTATGATGGAACCCATTTTAGTAAATAATTAAGATTCTATTTGTTATCGATTTTGCT

mRNA sequence

GTGGTTAAATTTTTTTTTTCTTTTTTTTGCCGTTTATCTAAACACATGTCCATCACCAGAAAAGAAAAGAGTAAAGCCCAAGCCCAAGCTGAAATCAACTTTGAATTTAGTACGGACGGCGGAATAACTCGACCACGGACCTTAGACGCTAGGGTTTAAACGTTGGACCCTAAAAACCCTCAACCTTTTGGAGCTCATTGCTTCACTGCACATCACAAAGGAATTTTATCTGATTGATAGTTGAAAACGGTAATGGCTGCGAAAGACGAGTTTCGAATATTTGTTGGAGGCCTCTCATGGAACATCTCAGAGTGTCAGCTCGAAAACGCTTTCAATCGCTTCGGAAAAATTCTCGAAACTCAAATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTCGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGATGCAATCAGAGAGATGCATGGCCAGGAGCTTCGTGAGTGGATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGATGATGATACCGAGCCAGGCTTCAGGGGAGGAGGTTATTCATCTAGTGGTAGGGCTAGTTTTGGGAGAGGAAAAGATAAATCTGTGAGGCAGGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTATCCCTCTGTCAGTGGTGAACGTGGTGGGGGTAGAGGTTCATTTTCATCACGTTCTCAATTTGACAGTGATGGCCGTGGGGATCGTTTTGGAGGAGACCGTGATCGATATGTGGATGACCGTTATAATGGAGGGGCGATATGGTGATAGAGATCGTTTTGATCGTAGAGAAGACAAGTATGGAAGTCGAGACCGCTACTTCGACGACAGGTACCCATCTGCTGGAGATCGCTTTACTAGTAGTGATAGGTATGATGTTAGTAATCGTTATCCTCAGAATGGCTACGTCAAAGACCGCGGCTACGATAGGGATATTGGTCCAAGGAGTGGCAGTGATAGGTATGGTAGCGGAGGTCCTGGCCGGTTGGGTTTTATGTCTTAAAACTCGTAGATAGTAAATATAATTTTGGTTCCTTATTATATTTTCTATCAGAAAAAATTTTCTCTAAGAAAAGTTCCCTTATTCCAATTTTGGTTCCCACAAACCATCTCAATCAGAGAATAAGAAGGTTTCCAAGTGTTGGTGCCCCAAAATTTAGTGATTGGTAGATTCAGAGTCGTCAACGAGCGTAAGTTTTTTCTTCTCTGCATTTTTCTTCAAAGCATGTTTAACCATAAAAATTGTTTTTTTTTTTTTGCCAATGTATTGGTATTTTTAAGGTTCCAATTAAAATTGAGTTTTTGTAATTCTTCCGCTGTAAAGGGTTTTCATCCCTTCATGGCTGTCATGAGGGCAGAAGTTATAGATAGGACAGGTCCTTACGATCGCCCAAGCAGGGTGGGACGACCATCTTTCTACGACCGCTATTAAAATTCAAATATATGTATATCGATAGTTGTTGGTTAACATTTGCAAATCATTCTAGCTAGGATATGCACTTGCAAAGAACTGGCAGTTTTTATTGCTTTTGAAAATATTTAGTAATAGAAATTTTGGGATGTTACAACTTACAATAACTAATATCTAATGTTTGTAGGCAGGTTCTAACTCTACCTCCAGCCTCAGATATTTTAGTTCTCAATGTGGTGAATTACTCCGCTACCCCTGTTGACTTTGATTTGTTCTTTTCTTAGGAACTGAAGACAATTGACCCAACTTTCATTTTCTTGAATCTCTGAATTCATTATTTAAAAGATCTTTATCTTTATATGGAAAAATATTGTTGAATGTTATTTATTTATAAGACCAAAGACTAATGCTGATTCTTTGGCATTTTGTCAAATATGTAGGACTGTCGATTGAGAAAACCATTGCTGTATTGTGATAACCATTGACTCCTATCTTGCCTCTCACGACTCTATGATGGAACCCATTTTAGTAAATAATTAAGATTCTATTTGTTATCGATTTTGCT

Coding sequence (CDS)

ATGGCTGCGAAAGACGAGTTTCGAATATTTGTTGGAGGCCTCTCATGGAACATCTCAGAGTGTCAGCTCGAAAACGCTTTCAATCGCTTCGGAAAAATTCTCGAAACTCAAATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTCGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGATGCAATCAGAGAGATGCATGGCCAGGAGCTTCGTGAGTGGATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGATGATGATACCGAGCCAGGCTTCAGGGGAGGAGGTTATTCATCTAGTGGTAGGGCTAGTTTTGGGAGAGGAAAAGATAAATCTGTGAGGCAGGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTATCCCTCTGTCAGTGGTGAACGTGGTGGGGGTAGAGGTTCATTTTCATCACGTTCTCAATTTGACAGTGATGGCCGTGGGGATCGTTTTGGAGGAGACCGTGATCGATATGTGGATGACCGTTATAATGGAGGGGCGATATGGTGA

Protein sequence

MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGGAIW

Homology

[Close]

BLAST of Cmc03g0075181 vs. NCBI nr
Match: XP_004150370.1 (glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >KGN62191.1 hypothetical protein Csa_006832 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 2.1e-86
Identity = 162/179 (90.50%), Postives = 168/179 (93.85%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MA+KDE+RIFVGGLSWNISE QLENAF RFGK+LETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHGQEL E IISVNKAEPKME DDTE GFRGGGYSS GRASFGRGKD+SV QD
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFGRGKDRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PSV G RGGGRGSFSSRS+FDSDGRGDRFGGDRDRYVD+RYNGG
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGG 179

[Close]

BLAST of Cmc03g0075181 vs. NCBI nr
Match: XP_038885252.1 (glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida] >XP_038885253.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida] >XP_038885254.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida] >XP_038885255.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.3e-85
Identity = 163/179 (91.06%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDE+RIFVGGLSWNISE QLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNISERQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHGQE  E IISVNKAEPKME DD EPGFRGGGYSS GRASFGRG D+SV QD
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMEGDDAEPGFRGGGYSSGGRASFGRG-DRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PSVSG RG GR SFSSRS+FDSDGRGDRFGGDRDRYVDDRYNGG
Sbjct: 121 ECFKCGRPGHWARDCPSVSGGRGRGRSSFSSRSRFDSDGRGDRFGGDRDRYVDDRYNGG 178

[Close]

BLAST of Cmc03g0075181 vs. NCBI nr
Match: XP_022133790.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 156/179 (87.15%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MA KDE+RIFVGGLSWNISE QLENAF+R+GKILETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHG+EL E  ISVNKAEPKME DD EPGFRGGGYSS GR SFGRG D+SV QD
Sbjct: 61  MDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYSSGGRPSFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PSV G RG GRGSFSSRS+FDSD RGDRFGGDRDRYVDDRY+GG
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGG 179

[Close]

BLAST of Cmc03g0075181 vs. NCBI nr
Match: XP_023544240.1 (glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo] >XP_023544248.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 153/179 (85.47%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDE+RIFVGGLSWN+SE +LENAF+R+GKI+ETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHG E  E IISVNKAEPKME DD EPGFRGGGYSS GRASFGRG D+SV QD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PS  G RG GRGSFSSRS+FD D RGDRFGGDRDRYVDDRY+GG
Sbjct: 121 ECFKCGRPGHWARDCPSTGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGG 179

[Close]

BLAST of Cmc03g0075181 vs. NCBI nr
Match: XP_022990423.1 (glycine-rich RNA-binding protein RZ1C [Cucurbita maxima] >XP_022990424.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 153/179 (85.47%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDE+RIFVGGLSWN+SE +LENAF+R+GKI+ETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHG E  E IISVNKAEPKME DD EPGFRGGGYSS GRASFGRG D+SV QD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PS  G RG GRGSFSSRS+FD D RGDRFGGDRDRYVDDRY+GG
Sbjct: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGG 179

[Close]

BLAST of Cmc03g0075181 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.5e-52
Identity = 116/193 (60.10%), Postives = 138/193 (71.50%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MAAK+  RIFVGGLS  +++  LE AF+RFG IL+ QIMLERDTGR RGFGFITFADRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEP-GFRGG---GYSSSGRASFGRGKDKS 120
           MD++IREMHG++  + +ISVN+AEPK+  DD E  G RGG   GYS +G+ SFG G    
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 --VRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF--DSDGRGDRFGG-----D 180
             V +DECFKCGR GHWARD PS  G RGG  G FSSR+     SDGR DR+       D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

[Close]

BLAST of Cmc03g0075181 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-44
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 6   EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAI 65
           E RIFVGGLSW+++E QLE+ F+R+GKI E QIM+ RDTGRPRGFGFITF DRRG DDAI
Sbjct: 11  ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70

Query: 66  REMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQDECFKC 125
           + MHG+EL   +ISVNKAEPK+  +D +   +GGGYSS G+ +          +DECFKC
Sbjct: 71  KHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT----------EDECFKC 130

Query: 126 GRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD 170
            RPGHWARD PS   +R   R   + RS+  D DG  DR+ GDRD
Sbjct: 131 RRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRD 164

[Close]

BLAST of Cmc03g0075181 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-29
Identity = 76/187 (40.64%), Postives = 109/187 (58.29%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           M+   E+R F+GGL+W  S+  L +AF ++G ++E +++L++ +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKM----EDDDTEPGFRGGGYSSSGRASFGRGKDKS 120
           MD+AI  M+G +L    I+V+KA+P       D+D + G   G      R S GRG    
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRG---- 120

Query: 121 VRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGR----GDRFGGDRDRY- 178
               +CFKCG+PGH+AR+ PS S   GGGR S         D R     DR+G   DRY 
Sbjct: 121 --GGDCFKCGKPGHFARECPSESSRDGGGRFSSKDDRYSSKDDRYGAKDDRYGAKEDRYG 180

[Close]

BLAST of Cmc03g0075181 vs. ExPASy Swiss-Prot
Match: P49310 (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.7e-20
Identity = 64/167 (38.32%), Postives = 93/167 (55.69%), Query Frame = 0


Query: 1   MAAKD-EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRR 60
           MA+ D E+R FVGGL+W   +  LE AF+++G++L+++I+ +R+TGR RGFGF+TF D +
Sbjct: 1   MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  GMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQ 120
            M DAI  M+GQ+L    I+VN+A+ +           GGGY S G   +G G       
Sbjct: 61  SMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGG 120

Query: 121 DECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGG 167
                 GR G ++      S  RGGG G +    + D  G G  +GG
Sbjct: 121 ------GREGGYSGGGGGYS-SRGGGGGGYGGGGRRDG-GEGGGYGG 159

[Close]

BLAST of Cmc03g0075181 vs. ExPASy Swiss-Prot
Match: P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.7e-20
Identity = 64/172 (37.21%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 1   MAAKD-EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRR 60
           MA+ D E+R FVGGL+W   E  LE AF++FG++++++I+ +R+TGR RGFGF+TF D +
Sbjct: 1   MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  GMDDAIREMHGQELREWIISVNKAEPKME-----DDDTEPGFRGGGYSSSGRASFGRGKD 120
            M DAI  M+GQ+L    I+VN+A+ +             G+RGGG    G   +G G+ 
Sbjct: 61  SMKDAIEGMNGQDLDGRSITVNEAQSRGSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGR- 120

Query: 121 KSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGG 167
              R+   +  G  G+           RGGG G +    + D  G G   GG
Sbjct: 121 ---REGGGYSGGGGGY---------SSRGGGGGGYGGGGRRDGGGYGGGEGG 159

[Close]

BLAST of Cmc03g0075181 vs. ExPASy TrEMBL
Match: A0A0A0LQB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G324460 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86
Identity = 162/179 (90.50%), Postives = 168/179 (93.85%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MA+KDE+RIFVGGLSWNISE QLENAF RFGK+LETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHGQEL E IISVNKAEPKME DDTE GFRGGGYSS GRASFGRGKD+SV QD
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFGRGKDRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PSV G RGGGRGSFSSRS+FDSDGRGDRFGGDRDRYVD+RYNGG
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERYNGG 179

[Close]

BLAST of Cmc03g0075181 vs. ExPASy TrEMBL
Match: A0A6J1BW89 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006270 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.1e-83
Identity = 156/179 (87.15%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MA KDE+RIFVGGLSWNISE QLENAF+R+GKILETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHG+EL E  ISVNKAEPKME DD EPGFRGGGYSS GR SFGRG D+SV QD
Sbjct: 61  MDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYSSGGRPSFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PSV G RG GRGSFSSRS+FDSD RGDRFGGDRDRYVDDRY+GG
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGG 179

[Close]

BLAST of Cmc03g0075181 vs. ExPASy TrEMBL
Match: A0A6J1JS04 (glycine-rich RNA-binding protein RZ1C OS=Cucurbita maxima OX=3661 GN=LOC111487287 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 153/179 (85.47%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDE+RIFVGGLSWN+SE +LENAF+R+GKI+ETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHG E  E IISVNKAEPKME DD EPGFRGGGYSS GRASFGRG D+SV QD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PS  G RG GRGSFSSRS+FD D RGDRFGGDRDRYVDDRY+GG
Sbjct: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGG 179

[Close]

BLAST of Cmc03g0075181 vs. ExPASy TrEMBL
Match: A0A6J1HB93 (glycine-rich RNA-binding protein RZ1C-like OS=Cucurbita moschata OX=3662 GN=LOC111462429 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 153/179 (85.47%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDE+RIFVGGLSWN+SE +LENAF+R+GKI+ETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQD 120
           MDDAIREMHG E  E IISVNKAEPKME DD EPGFRGGGYSS GRASFGRG D+SV QD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG 180
           ECFKCGRPGHWARD PS  G RG GRGSFSSRS+FD D RGDRFGGDRDRYVDDRY+GG
Sbjct: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGG 179

[Close]

BLAST of Cmc03g0075181 vs. ExPASy TrEMBL
Match: A0A5A7T4L2 (Glycine-rich RNA-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00150 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.0e-75
Identity = 149/170 (87.65%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 14  LSWNIS-ECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQE 73
           LSW +S E  L N     G  +E  IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQE
Sbjct: 62  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQE 121

Query: 74  LREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQDECFKCGRPGHWA 133
           LRE IISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSV QDECFKC RPGHWA
Sbjct: 122 LRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCERPGHWA 181

Query: 134 RDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGGAIW 183
           RDYPSV GERGGGRGSFSSRS+FDSDGRGDRFGGDRDRYVDDRYNGGAIW
Sbjct: 182 RDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDRYNGGAIW 229

[Close]

BLAST of Cmc03g0075181 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 205.7 bits (522), Expect = 3.2e-53
Identity = 116/193 (60.10%), Postives = 138/193 (71.50%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           MAAK+  RIFVGGLS  +++  LE AF+RFG IL+ QIMLERDTGR RGFGFITFADRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKMEDDDTEP-GFRGG---GYSSSGRASFGRGKDKS 120
           MD++IREMHG++  + +ISVN+AEPK+  DD E  G RGG   GYS +G+ SFG G    
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 --VRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF--DSDGRGDRFGG-----D 180
             V +DECFKCGR GHWARD PS  G RGG  G FSSR+     SDGR DR+       D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

[Close]

BLAST of Cmc03g0075181 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 6   EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAI 65
           E RIFVGGLSW+++E QLE+ F+R+GKI E QIM+ RDTGRPRGFGFITF DRRG DDAI
Sbjct: 11  ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70

Query: 66  REMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQDECFKC 125
           + MHG+EL   +ISVNKAEPK+  +D +   +GGGYSS G+ +          +DECFKC
Sbjct: 71  KHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT----------EDECFKC 130

Query: 126 GRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD 170
            RPGHWARD PS   +R   R   + RS+  D DG  DR+ GDRD
Sbjct: 131 RRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRD 164

[Close]

BLAST of Cmc03g0075181 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 6   EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAI 65
           E RIFVGGLSW+++E QLE+ F+R+GKI E QIM+ RDTGRPRGFGFITF DRRG DDAI
Sbjct: 11  ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70

Query: 66  REMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQDECFKC 125
           + MHG+EL   +ISVNKAEPK+  +D +   +GGGYSS G+ +          +DECFKC
Sbjct: 71  KHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT----------EDECFKC 130

Query: 126 GRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD 170
            RPGHWARD PS   +R   R   + RS+  D DG  DR+ GDRD
Sbjct: 131 RRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRD 164

[Close]

BLAST of Cmc03g0075181 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-30
Identity = 76/187 (40.64%), Postives = 109/187 (58.29%), Query Frame = 0


Query: 1   MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRG 60
           M+   E+R F+GGL+W  S+  L +AF ++G ++E +++L++ +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQELREWIISVNKAEPKM----EDDDTEPGFRGGGYSSSGRASFGRGKDKS 120
           MD+AI  M+G +L    I+V+KA+P       D+D + G   G      R S GRG    
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRG---- 120

Query: 121 VRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGR----GDRFGGDRDRY- 178
               +CFKCG+PGH+AR+ PS S   GGGR S         D R     DR+G   DRY 
Sbjct: 121 --GGDCFKCGKPGHFARECPSESSRDGGGRFSSKDDRYSSKDDRYGAKDDRYGAKEDRYG 180

[Close]

BLAST of Cmc03g0075181 vs. TAIR 10
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-19
Identity = 64/178 (35.96%), Postives = 94/178 (52.81%), Query Frame = 0


Query: 6   EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAI 65
           E+R FVGGL+W  ++  L+  F++FG +++++I+ +R++GR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64

Query: 66  REMHGQELREWIISVNKAEPK-MEDDDTEPGFRGGGYSSSGRASFGRGKDKSVRQDECFK 125
            EM+G+EL   +I+VN+A+ +         G  GGGY S G   +  G            
Sbjct: 65  EEMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGG---- 124

Query: 126 CGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGGAIW 183
            G  G+  R     SG  GGGRG +    + +  G G   GGD   Y      GG  W
Sbjct: 125 -GGGGYERRSGGYGSGGGGGGRG-YGGGGRREGGGYG---GGDGGSY----GGGGGGW 169

The following BLAST results are available for this feature:

BLAST of Cmc03g0075181 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150370.1	2.1e-86	90.50	glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >KGN62191.1 h...	[more]
XP_038885252.1	2.3e-85	91.06	glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida] >XP_0388852...	[more]
XP_022133790.1	1.1e-82	87.15	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]	[more]
XP_023544240.1	3.1e-82	85.47	glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo] >XP_023544248...	[more]
XP_022990423.1	3.1e-82	85.47	glycine-rich RNA-binding protein RZ1C [Cucurbita maxima] >XP_022990424.1 glycine...	[more]

BLAST of Cmc03g0075181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWN5	4.5e-52	60.10	Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE...	[more]
O22703	1.5e-44	58.18	Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE...	[more]
Q9LIN3	4.1e-29	40.64	Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE...	[more]
P49310	7.7e-20	38.32	Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1	[more]
P49311	7.7e-20	37.21	Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1	[more]

BLAST of Cmc03g0075181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQB5	1.0e-86	90.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G324460 PE=4 SV=1	[more]
A0A6J1BW89	5.1e-83	87.15	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=...	[more]
A0A6J1JS04	1.5e-82	85.47	glycine-rich RNA-binding protein RZ1C OS=Cucurbita maxima OX=3661 GN=LOC11148728...	[more]
A0A6J1HB93	1.5e-82	85.47	glycine-rich RNA-binding protein RZ1C-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5A7T4L2	1.0e-75	87.65	Glycine-rich RNA-binding family protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Cmc03g0075181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04280.1	3.2e-53	60.10	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT1G60650.1	1.1e-45	58.18	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT1G60650.2	1.1e-45	58.18	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT3G26420.1	2.9e-30	40.64	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT4G39260.1	3.0e-19	35.96	cold, circadian rhythm, and RNA binding 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 e-value: 1.9E-23 score: 93.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..74 e-value: 2.0E-17 score: 62.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..85 score: 17.847509
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 121..137 e-value: 0.0079 score: 24.2
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 121..134 e-value: 3.5E-6 score: 26.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 122..137 score: 8.976924
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..118 e-value: 1.4E-27 score: 98.4
None	No IPR available	GENE3D	4.10.60.10		coord: 119..159 e-value: 1.3E-6 score: 30.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..175
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 1..180
None	No IPR available	PANTHER	PTHR15241:SF294	GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKE	coord: 1..180
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..113
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 103..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0075181.1	Cmc03g0075181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding