Cmc03g0074831 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0074831
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 22263755 .. 22264288 (-)
RNA-Seq Expression	Cmc03g0074831
Synteny	Cmc03g0074831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCTGAACCAGTGGTAAGGGAGTACCCTGATGTCTTCCCCGATGAGCTTCTAGGACTTCCGCCTCCTAGAGAGATAGACTTCTCCATTGAATTAGAATCAGGCATTGCTCCTATCTCGAGAGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGCTGAAGGTCCAATTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGGGCCCCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGCTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGGATCAGGGACAGTGACATTCCCAAGACGGCCTTTCGTTAG

mRNA sequence

ATGAAAGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCTGAACCAGTGGTAAGGGAGTACCCTGATGTCTTCCCCGATGAGCTTCTAGGACTTCCGCCTCCTAGAGAGATAGACTTCTCCATTGAATTAGAATCAGGCATTGCTCCTATCTCGAGAGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGCTGAAGGTCCAATTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGGGCCCCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGCTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGGATCAGGGACAGTGACATTCCCAAGACGGCCTTTCGTTAG

Coding sequence (CDS)

ATGAAAGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCTGAACCAGTGGTAAGGGAGTACCCTGATGTCTTCCCCGATGAGCTTCTAGGACTTCCGCCTCCTAGAGAGATAGACTTCTCCATTGAATTAGAATCAGGCATTGCTCCTATCTCGAGAGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGCTGAAGGTCCAATTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGGGCCCCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGCTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGGATCAGGGACAGTGACATTCCCAAGACGGCCTTTCGTTAG

Protein sequence

MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

Homology

[Close]

BLAST of Cmc03g0074831 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 347.1 bits (889), Expect = 9.3e-92
Identity = 170/177 (96.05%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IEL
Sbjct: 486 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 545

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 546 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 605

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
Sbjct: 606 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 662

[Close]

BLAST of Cmc03g0074831 vs. NCBI nr
Match: KAA0066101.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 170/177 (96.05%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDEL GLPPPREI F+IEL
Sbjct: 526 MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELSGLPPPREIVFAIEL 585

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKE KVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 586 EPGTAPISRAPYRMAPAELKEFKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
Sbjct: 646 DYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 702

[Close]

BLAST of Cmc03g0074831 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 169/177 (95.48%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IEL
Sbjct: 481 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 540

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 541 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 600

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Sbjct: 601 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 657

[Close]

BLAST of Cmc03g0074831 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 169/177 (95.48%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1    MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
            MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IEL
Sbjct: 1145 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 1204

Query: 61   ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            E G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 1205 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1264

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Sbjct: 1265 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1321

[Close]

BLAST of Cmc03g0074831 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 169/177 (95.48%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

[Close]

BLAST of Cmc03g0074831 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 8.3e-27
Identity = 68/191 (35.60%), Postives = 104/191 (54.45%), Query Frame = 0


Query: 2   KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELLGLPPPR 61
           +AS L   G +  + S + + EP  +  S           + ++Y ++  ++L    PPR
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDL----PPR 579

Query: 62  EIDFS-------IELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAP 121
             D +       IE++ G       PY +     +E+   +Q+LLD  FI PS SP  +P
Sbjct: 580 PADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSP 639

Query: 122 VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 177
           V+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ 
Sbjct: 640 VVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIP 699

[Close]

BLAST of Cmc03g0074831 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 8.3e-27
Identity = 68/191 (35.60%), Postives = 104/191 (54.45%), Query Frame = 0


Query: 2   KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELLGLPPPR 61
           +AS L   G +  + S + + EP  +  S           + ++Y ++  ++L    PPR
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDL----PPR 605

Query: 62  EIDFS-------IELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAP 121
             D +       IE++ G       PY +     +E+   +Q+LLD  FI PS SP  +P
Sbjct: 606 PADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSP 665

Query: 122 VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 177
           V+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ 
Sbjct: 666 VVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIP 725

[Close]

BLAST of Cmc03g0074831 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22
Identity = 55/158 (34.81%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 22  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAEL 81
           +EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P ++
Sbjct: 370 KEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKM 429

Query: 82  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 141
           + +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I
Sbjct: 430 QAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLI 489

Query: 142 DDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           + L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR
Sbjct: 490 EQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

[Close]

BLAST of Cmc03g0074831 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22
Identity = 55/158 (34.81%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 22  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAEL 81
           +EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P ++
Sbjct: 370 KEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKM 429

Query: 82  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 141
           + +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I
Sbjct: 430 QAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLI 489

Query: 142 DDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           + L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR
Sbjct: 490 EQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

[Close]

BLAST of Cmc03g0074831 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22
Identity = 55/158 (34.81%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 22  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAEL 81
           +EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P ++
Sbjct: 370 KEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKM 429

Query: 82  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 141
           + +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I
Sbjct: 430 QAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLI 489

Query: 142 DDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           + L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR
Sbjct: 490 EQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

[Close]

BLAST of Cmc03g0074831 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.5e-92
Identity = 170/177 (96.05%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IEL
Sbjct: 486 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 545

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 546 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 605

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
Sbjct: 606 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 662

[Close]

BLAST of Cmc03g0074831 vs. ExPASy TrEMBL
Match: A0A5A7VK60 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00930 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 5.9e-92
Identity = 170/177 (96.05%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDEL GLPPPREI F+IEL
Sbjct: 526 MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELSGLPPPREIVFAIEL 585

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKE KVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 586 EPGTAPISRAPYRMAPAELKEFKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
Sbjct: 646 DYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 702

[Close]

BLAST of Cmc03g0074831 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 169/177 (95.48%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

[Close]

BLAST of Cmc03g0074831 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 169/177 (95.48%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

[Close]

BLAST of Cmc03g0074831 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 169/177 (95.48%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIEL 60
           MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  ESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 178
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

The following BLAST results are available for this feature:

BLAST of Cmc03g0074831 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01306.1	9.3e-92	96.05	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066101.1	1.2e-91	96.05	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0031437.1	2.1e-91	95.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033825.1	2.1e-91	95.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025848.1	2.1e-91	95.48	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]

BLAST of Cmc03g0074831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	8.3e-27	35.60	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	8.3e-27	35.60	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	2.1e-22	34.81	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.1e-22	34.81	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.1e-22	34.81	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0074831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSV9	4.5e-92	96.05	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5A7VK60	5.9e-92	96.05	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5D3CQB5	1.0e-91	95.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UBS1	1.0e-91	95.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TEQ2	1.0e-91	95.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]

BLAST of Cmc03g0074831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 55..177 e-value: 3.0E-52 score: 179.0
None	No IPR available	PANTHER	PTHR24559:SF382	SUBFAMILY NOT NAMED	coord: 27..167
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 27..167
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..177 e-value: 6.47689E-48 score: 151.979
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..161 e-value: 3.0E-52 score: 179.0
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 109..176 e-value: 1.1E-7 score: 31.6
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0074831.1	Cmc03g0074831.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0036402	proteasome-activating activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding