Homology
BLAST of Cmc03g0072871 vs. NCBI nr
Match:
TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2330.4 bits (6038), Expect = 0.0e+00
Identity = 1168/1174 (99.49%), Postives = 1169/1174 (99.57%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL 1174
BLAST of Cmc03g0072871 vs. NCBI nr
Match:
KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2330.4 bits (6038), Expect = 0.0e+00
Identity = 1168/1174 (99.49%), Postives = 1169/1174 (99.57%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL 1174
BLAST of Cmc03g0072871 vs. NCBI nr
Match:
KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2328.9 bits (6034), Expect = 0.0e+00
Identity = 1167/1174 (99.40%), Postives = 1169/1174 (99.57%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y+L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYML 1174
BLAST of Cmc03g0072871 vs. NCBI nr
Match:
KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2328.5 bits (6033), Expect = 0.0e+00
Identity = 1167/1174 (99.40%), Postives = 1168/1174 (99.49%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL 1174
BLAST of Cmc03g0072871 vs. NCBI nr
Match:
KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2328.5 bits (6033), Expect = 0.0e+00
Identity = 1167/1174 (99.40%), Postives = 1168/1174 (99.49%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL 1174
BLAST of Cmc03g0072871 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 640.6 bits (1651), Expect = 3.6e-182
Identity = 410/1210 (33.88%), Postives = 638/1210 (52.73%), Query Frame = 0
Query: 13 KLNGNN-YASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARA 72
K NG+N +++W+ + +LI L VL + + A E WA +E+A +
Sbjct: 10 KFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKA--------EDWADLDERAAS 69
Query: 73 YILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREH 132
I LS+ + TAR I L+ ++ + K K +Y M+EG + H
Sbjct: 70 AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSH 129
Query: 133 --VLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNEL 192
V N ++ +A + G I+E + +L SLP S+ + + K L + + L
Sbjct: 130 LNVFNGLI-TQLANL-GVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 189
Query: 193 QTFESLMKIKGQKGEANVATST-RKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLA 252
E + K +G+A + R + R S + +S G +G
Sbjct: 190 LLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS--------------GARG------ 249
Query: 253 AAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYD-------------LLV 312
K+ ++K+ C++CNQ GH+KR+CP K + K D +L
Sbjct: 250 --KSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLF 309
Query: 313 L---ETCL-VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAV 372
+ E C+ + +S W++D+ A++H + + G T+++G +
Sbjct: 310 INEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFG--TVKMGNTSYSKIAGI 369
Query: 373 GGLRLCLQKSF---LLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEIC 432
G +C++ + L+L++V VPDL+ NLIS L Y F K + K + I
Sbjct: 370 GD--ICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIA 429
Query: 433 SAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIER 492
LY + + LN + ++ LWH R+GH++ ++
Sbjct: 430 KGVARGTLYRTNAEICQGELNAAQDEISV--------------DLWHKRMGHMSEKGLQI 489
Query: 493 LVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGG 552
L K L+S + ++ C+ CL GK + F R L+LV+SD+CGPM +++ GG
Sbjct: 490 LAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGG 549
Query: 553 FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLK 612
+YF+TF DD SR +VY+++ K + + F+++ A VE + +K RSD GGEY +
Sbjct: 550 NKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSRE 609
Query: 613 FQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVY 672
F+ Y GI + + PGTPQ NGV+ER NRT+++ VRSM+ A LP SFWG AVQTA Y
Sbjct: 610 FEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACY 669
Query: 673 ILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENNPKKLEPRSKLCLFVGY 732
++N PS ++ E P ++W ++ S H +++GC AHV + KL+ +S C+F+GY
Sbjct: 670 LINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGY 729
Query: 733 PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNEL--------------- 792
G +DP KV S + F E +R S+ V N +
Sbjct: 730 GDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPT 789
Query: 793 -SKETTEPSTRVVEEP-----------SALTRVVHVGSSTRTHQPQSLREPRRSGRVTNL 852
++ TT+ + E+P + V H HQP RRS R
Sbjct: 790 SAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL-----RRSERPRVE 849
Query: 853 PIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQP 912
RY S TE + + D +P + K+ + +K++ +KAM E+ES+ N + LV+ P
Sbjct: 850 SRRYPS-TEYVLISDD---REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELP 909
Query: 913 DGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS 972
G +P+ CKW++K K+ D K+ +KARLV KG+ Q +G+D++E FSPV + SIR +LS
Sbjct: 910 KGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILS 969
Query: 973 IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRS 1032
+AA D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++ +CKLN+S+YGLKQA R
Sbjct: 970 LAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQ 1029
Query: 1033 WNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILLIGNDIGLLTDIKKWL 1092
W ++FD+ +KS + + +PCVY KR + L+LYVDD+L++G D GL+ +K L
Sbjct: 1030 WYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDL 1089
Query: 1093 ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGV 1152
+ F MKDLG AQ +LG++I R+R ++ L LSQ YI++++ +++M+N+K P +
Sbjct: 1090 SKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHL 1149
Query: 1153 TLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT 1168
LSK+ CP T ++ M +PY+SAVGSLMYAM+CTRPDI +AVG+VSR+ NPG HW
Sbjct: 1150 KLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWE 1159
BLAST of Cmc03g0072871 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 443.7 bits (1140), Expect = 6.5e-123
Identity = 370/1312 (28.20%), Postives = 607/1312 (46.27%), Query Frame = 0
Query: 15 NGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYIL 74
+G YA WK I +L D+ V+ P E + W KA A++ I+
Sbjct: 12 DGEKYAIWKFRIRALLAEQDVLKVVDGLMP-----------NEVDDSWKKAERCAKSTII 71
Query: 75 ASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVRE--HV 134
LS+ S +TAR+I+++L ++ + S + K + + +++ S+ H+
Sbjct: 72 EYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHI 131
Query: 135 LNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTF 194
+ ++ +A GA I+E ++S +L +LP + A+ LT + +
Sbjct: 132 FDELISELLAA--GAKIEEMDKISHLLITLPSCY-DGIITAIETLSEENLTLAFVKNRLL 191
Query: 195 ESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT 254
+ +KIK + + H + + ++ N+ K KK +GN +
Sbjct: 192 DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNL---FKNRVTKPKKIFKGN--------S 251
Query: 255 TKKTKAAKGICFHCNQEGHWKRNCPKY---LAEKKKAKQGKYDL-----LVLETCLVEN- 314
K K C HC +EGH K++C Y L K K + + + V N
Sbjct: 252 KYKVK-----CHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNT 311
Query: 315 ---DDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 374
D+ +++DSGA++H+ + + ++ G + A G +RL
Sbjct: 312 SVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRL-RND 371
Query: 375 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEIC-SAKLENNLYVL 434
+ LE+V + NL+SVK L E S+ F+ + V I KNG+ + ++ + NN+ V+
Sbjct: 372 HEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVI 431
Query: 435 RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 494
Q + K N LWH R GHI+ ++ + + + S+
Sbjct: 432 N-----------------FQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQS 491
Query: 495 -----ENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEY 554
E S +CE CL GK + PF K H K PL +VHSD+CGP+ Y
Sbjct: 492 LLNNLELSCEICEPCLNGKQARLPFKQLKDKTH-IKRPLFVVHSDVCGPITPVTLDDKNY 551
Query: 555 FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQN 614
F+ F D ++ Y YL+++KS+ F+++ A+ E + + D G EY+ + +
Sbjct: 552 FVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQ 611
Query: 615 YLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILN 674
+ ++ GI L+ P TPQ NGVSER RT+ + R+M+S A L SFWG AV TA Y++N
Sbjct: 612 FCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLIN 671
Query: 675 CVPSKSV---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-P 734
+PS+++ S+TP ++W+ +K L+H R++G +V ++N K + +S +FVGY P
Sbjct: 672 RIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP 731
Query: 735 KG--------------------------TRGGYFYD--------------PKDNKVFVST 794
G +R F P D++ + T
Sbjct: 732 NGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQT 791
Query: 795 ----------NATFLEEDHIREHK----PRSKIVLNELS------------KETTEPSTR 854
N FL++ E+K KI+ E K++ E +
Sbjct: 792 EFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKY 851
Query: 855 VVEEPSALTRVVHVGSSTRTHQPQSLREP------------------------RRSGRVT 914
+ E R H+ S + P RE RRS R+
Sbjct: 852 FLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLK 911
Query: 915 NLP-IRYMSLTETL--TVISDGDI--EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 974
P I Y +L V++ I + P +F + DK W +A+N EL + N+
Sbjct: 912 TKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNT 971
Query: 975 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 1034
W + +P+ + +W++ K G +KARLVA+G+TQ +DYEETF+PVA +
Sbjct: 972 WTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARIS 1031
Query: 1035 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 1094
S R +LS+ ++ ++ QMDVKTAFLNG L+E IYM+ P+G I +CKLN++IYG
Sbjct: 1032 SFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYG 1091
Query: 1095 LKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGNDIG 1154
LKQA+R W F+ A+K F + C+Y K IN+++ +++LYVDD+++ D+
Sbjct: 1092 LKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMT 1151
Query: 1155 LLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKR 1197
+ + K++L +F+M DL E + +GI+I + + + LSQ++Y+ KI+ K++M+N
Sbjct: 1152 RMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNA 1211
BLAST of Cmc03g0072871 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 399.1 bits (1024), Expect = 1.8e-109
Identity = 346/1317 (26.27%), Postives = 562/1317 (42.67%), Query Frame = 0
Query: 6 LNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPA---ANATRTVREPYERW 65
+NM KL NY W ++ + +L L PA +A V Y RW
Sbjct: 18 VNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRW 77
Query: 66 AKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY----QIKHDALKYIY 125
+ ++ + +L ++S + TA +I ++L++++ SY Q++ ++
Sbjct: 78 KRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTK 137
Query: 126 NARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKI 185
+ ++ +++ ++ F+ + G +D QV +LE+LPE +
Sbjct: 138 GTK-----TIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDT 197
Query: 186 AYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK 245
TLT + L ES KI + + +T+ T + + + N ++ +
Sbjct: 198 PPTLTEIHERLLNHES--KILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRN 257
Query: 246 GGQGNK----ANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCP--KYLAEKKKAKQGKYD 305
+K ++ ++K G C C +GH + C ++ ++Q
Sbjct: 258 NNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSP 317
Query: 306 L--------LVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 365
L L + N+ W++DSGAT+H+ S F + S Q TG + V G
Sbjct: 318 FTPWQPRANLALGSPYSSNN---WLLDSGATHHITSDFNNL-SLHQPYTGGDDVMVADGS 377
Query: 366 VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE------QSYSLTFNVNKV 425
+ G L + L L N+ VP++ +NLISV L + + +F V +
Sbjct: 378 TIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDL 437
Query: 426 FIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENA--HLWHL 485
GV + K ++ LY + A +Q L SP A WH
Sbjct: 438 ---NTGVPLLQGKTKDELY--------------EWPIASSQPVSLFASPSSKATHSSWHA 497
Query: 486 RLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 545
RLGH + + ++ N LS L + C CL K K PF+ + PLE ++S
Sbjct: 498 RLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYS 557
Query: 546 DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 605
D+ + + + Y++ F D ++RY ++Y ++ KS+ E F +K +EN I T
Sbjct: 558 DVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGT 617
Query: 606 FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 665
F SD GGE++ L Y + GI S P TP+ NG+SER++R +++ +++S+A +P
Sbjct: 618 FYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP 677
Query: 666 NSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKK 725
++W YA AVY++N +P+ + E+P + G + R++GC + + N K
Sbjct: 678 KTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHK 737
Query: 726 LEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE-----------DHIREHKP 785
L+ +S+ C+F+GY + +++++S + F E ++E +
Sbjct: 738 LDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRR 797
Query: 786 RSKIVLNELSKETTEPSTRVV----------------EEPSALTRVVHVGSS-------- 845
S V S TT P+ V PSA R V SS
Sbjct: 798 ESSCV---WSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSS 857
Query: 846 --------------------------TRTHQ-----------------PQSLREPRRSGR 905
T+TH QSL P +S
Sbjct: 858 SFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSS 917
Query: 906 VTNLPIRYMSLTET--------------LTVISDGDIEDPLTF----------------- 965
+ P S + T L I + + + PL
Sbjct: 918 SSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPK 977
Query: 966 -------------KKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCKWI 1025
+ A++ + + W AM E+ + N WDLV P V +GC+WI
Sbjct: 978 YSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWI 1037
Query: 1026 YKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQ 1085
+ +K +DG + +KARLVAKGY Q G+DY ETFSPV SIRI+L +A + I Q
Sbjct: 1038 FTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQ 1097
Query: 1086 MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 1145
+DV AFL G L + +YM QP GFI + +CKL +++YGLKQA R+W + + +
Sbjct: 1098 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1157
Query: 1146 YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKKWLATQFQMKDLGEA 1167
GF V + ++ KS+ ++++YVDDIL+ GND LL + L+ +F +KD E
Sbjct: 1158 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1217
BLAST of Cmc03g0072871 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 392.9 bits (1008), Expect = 1.3e-107
Identity = 339/1315 (25.78%), Postives = 553/1315 (42.05%), Query Frame = 0
Query: 6 LNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPA---ANATRTVREPYERW 65
+NM KL NY W ++ + +L L P PA +A V Y RW
Sbjct: 18 VNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRW 77
Query: 66 AKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARM 125
+ ++ + IL ++S + TA +I ++L++++ SY
Sbjct: 78 RRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSY--------------- 137
Query: 126 NEGASVREHV--LNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 185
HV L + F+ + G +D QV +LE+LP+ +
Sbjct: 138 -------GHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPP 197
Query: 186 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 245
+LT + L ES + + + +T+ ++ + N +
Sbjct: 198 SLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSN 257
Query: 246 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK-----------QG 305
++ + ++ K G C C+ +GH + CP+ + Q
Sbjct: 258 SWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQP 317
Query: 306 KYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAI 365
+ +L V N W++DSGAT+H+ S F + S+ Q TG + + G +
Sbjct: 318 RANLAVNSPYNANN----WLLDSGATHHITSDFNNL-SFHQPYTGGDDVMIADGSTIPIT 377
Query: 366 AVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE------QSYSLTFNVNKVFIYKN 425
G L L L V VP++ +NLISV L + + +F V +
Sbjct: 378 HTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDL---NT 437
Query: 426 GVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINL 485
GV + K ++ LY +S+A+ MF + + K WH RLGH +L
Sbjct: 438 GVPLLQGKTKDELYEWPIASSQAV---SMFASPCS---------KATHSSWHSRLGHPSL 497
Query: 486 NRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMN 545
+ ++ N L L + L C C K K PF+ + +PLE ++SD+
Sbjct: 498 AILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SP 557
Query: 546 VKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGG 605
+ + + Y++ F D ++RY ++Y ++ KS+ + F +K+ VEN I T SD GG
Sbjct: 558 ILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGG 617
Query: 606 EYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYA 665
E++ L+ +YL + GI S P TP+ NG+SER++R +++M +++S+A +P ++W YA
Sbjct: 618 EFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYA 677
Query: 666 VQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKL 725
AVY++N +P+ + ++P + G+ + +++GC + + N KLE +SK
Sbjct: 678 FSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQ 737
Query: 726 CLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE---------DHIREHKPRSKIVLNEL 785
C F+GY +++ S + F E + RS N
Sbjct: 738 CAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWP 797
Query: 786 SKETTEPSTRVV------------------EEPSAL-----------------------T 845
S TT P+T +V PS L T
Sbjct: 798 S-HTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPT 857
Query: 846 RVVHVG--SSTRTHQPQ-----------------SLREPRRSGRVTNLPIRYMSLTETLT 905
H G + + HQ Q S P ++ + PI + T
Sbjct: 858 APSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPST 917
Query: 906 VISDGDI----------------------------------------------------- 965
IS+ +
Sbjct: 918 SISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 977
Query: 966 -----EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYK 1025
+P T +AM+D D W +AM E+ + N WDLV P V +GC+WI+
Sbjct: 978 SLAANSEPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFT 1037
Query: 1026 RKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD 1085
+K +DG + +KARLVAKGY Q G+DY ETFSPV SIRI+L +A + I Q+D
Sbjct: 1038 KKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLD 1097
Query: 1086 VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYG 1145
V AFL G L + +YM QP GF+ + +C+L ++IYGLKQA R+W + T + + G
Sbjct: 1098 VNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVG 1157
Query: 1146 FDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKKWLATQFQMKDLGEAQF 1167
F + + ++ +S+ ++++YVDDIL+ GND LL L+ +F +K+ + +
Sbjct: 1158 FVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHY 1217
BLAST of Cmc03g0072871 vs. ExPASy Swiss-Prot
Match:
Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)
HSP 1 Score: 119.8 bits (299), Expect = 2.2e-25
Identity = 140/611 (22.91%), Postives = 246/611 (40.26%), Query Frame = 0
Query: 145 NGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGE 204
N + + IL+ L F R N K L+ L E+Q KI
Sbjct: 296 NNINVSDRLACQLILKGLSGDFKYLR-NQYRTKTNMKLSQLFAEIQLIYDENKIMNLN-- 355
Query: 205 ANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICF 264
S K H + +++ P+++ K + ++ N + + K A F
Sbjct: 356 ---KPSQYKQHSEYKNVSRTSPNTTNTKVTTRNY----HRTNSSKPRAAKAHNIATSSKF 415
Query: 265 HCNQEGHWKRN--CPKYLAEKKKAKQGKYDLLVLETCLVENDDSA---WIIDSGATNHVC 324
H + +YL++ + G+ T ++++D +IDSGA+ +
Sbjct: 416 SRVNNDHINESTVSSQYLSDDNELSLGQQQKESKPTHTIDSNDELPDHLLIDSGASQTLV 475
Query: 325 SSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLI 384
S + E+ + + A+G L Q P++ +L+
Sbjct: 476 RSAHYLH--HATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKALHTPNIAYDLL 535
Query: 385 SVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQ 444
S+ L Q+ + F N +G + + Y L+ K L+ + + K I
Sbjct: 536 SLSELANQNITACFTRN-TLERSDGTVLAPIVKHGDFY---WLSKKYLIPSHISKLTINN 595
Query: 445 NKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLP-------VCESCLEG 504
+ K K L H LGH N I++ +K ++ L+E+ + C CL G
Sbjct: 596 VNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIG 655
Query: 505 KMTKRPFTGKGHRAK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYL 564
K TK KG R K EP + +H+D+ GP++ + YFI+FTD+ +R+ +VY
Sbjct: 656 KSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYP 715
Query: 565 MQHKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAP 624
+ + E L F A ++N + + + DRG EY + + GI + +
Sbjct: 716 LHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTT 775
Query: 625 GTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKL 684
+ +GV+ER NRTLL+ R+++ + LPN W AV+ + I N + S ++ +
Sbjct: 776 ADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK-NDKSARQ 835
Query: 685 WNGRKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVF 735
G G + +G P V +NP K+ PR + + + G Y P K
Sbjct: 836 HAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTV 888
BLAST of Cmc03g0072871 vs. ExPASy TrEMBL
Match:
A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)
HSP 1 Score: 2330.4 bits (6038), Expect = 0.0e+00
Identity = 1168/1174 (99.49%), Postives = 1169/1174 (99.57%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL 1174
BLAST of Cmc03g0072871 vs. ExPASy TrEMBL
Match:
A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)
HSP 1 Score: 2330.4 bits (6038), Expect = 0.0e+00
Identity = 1168/1174 (99.49%), Postives = 1169/1174 (99.57%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL 1174
BLAST of Cmc03g0072871 vs. ExPASy TrEMBL
Match:
A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)
HSP 1 Score: 2328.9 bits (6034), Expect = 0.0e+00
Identity = 1167/1174 (99.40%), Postives = 1169/1174 (99.57%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y+L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYML 1174
BLAST of Cmc03g0072871 vs. ExPASy TrEMBL
Match:
A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)
HSP 1 Score: 2328.5 bits (6033), Expect = 0.0e+00
Identity = 1167/1174 (99.40%), Postives = 1168/1174 (99.49%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL 1174
BLAST of Cmc03g0072871 vs. ExPASy TrEMBL
Match:
A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)
HSP 1 Score: 2328.5 bits (6033), Expect = 0.0e+00
Identity = 1167/1174 (99.40%), Postives = 1168/1174 (99.49%), Query Frame = 0
Query: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240
Query: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300
Query: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360
Query: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420
Query: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480
Query: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540
Query: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541 RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600
Query: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601 QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660
Query: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661 TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720
Query: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721 KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780
Query: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781 HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840
Query: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841 LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900
Query: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960
Query: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020
Query: 1021 LLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
LLIGNDIGLLTDIK+WLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080
Query: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140
Query: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVL 1175
VGIVSRYQSNPGLAHWTAVKTILKYLR Y L
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL 1174
BLAST of Cmc03g0072871 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 230.3 bits (586), Expect = 8.1e-60
Identity = 125/354 (35.31%), Postives = 203/354 (57.34%), Query Frame = 0
Query: 818 EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGAD 877
++P T+ +A E + W AM+ E+ +M W++ P KPIGCKW+YK K +D
Sbjct: 84 KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143
Query: 878 GKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFL 937
G ++ +KARLVAKGYTQ EG+D+ ETFSPV L S++++L+I+A +++ + Q+D+ AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203
Query: 938 NGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 997
NG+L+E IYM+ P G+ + +C L +SIYGLKQASR W ++F + +GF
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263
Query: 998 QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVL 1057
Q + + +I +++YVDDI++ N+ + ++K L + F+++DLG ++ L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323
Query: 1058 GIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE 1117
G++I R + + Q Y ++ + + K +P VT S + D +
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVD 383
Query: 1118 MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLR 1168
+ Y +G LMY + TR DI +AV +S++ P LAH AV IL Y++
Sbjct: 384 AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIK 425
BLAST of Cmc03g0072871 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 84.0 bits (206), Expect = 9.3e-16
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 0
Query: 790 RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 849
R + L +Y SLT T T+ ++P + A++D W +AM EL+++ N
Sbjct: 4 RSKAGINKLNPKY-SLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALSRN 63
Query: 850 SVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM 909
W LV P +GCKW++K K +DG + KARLVAKG+ Q EG+ + ET+SPV
Sbjct: 64 KTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 123
Query: 910 LKSIRILLSIA 921
+IR +L++A
Sbjct: 124 TATIRTILNVA 125
BLAST of Cmc03g0072871 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 83.2 bits (204), Expect = 1.6e-15
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0
Query: 1012 FLVLYVDDILLIGNDIGLLTDIKKWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQA 1071
+L+LYVDDILL G+ LL + L++ F MKDLG + LGIQI L LSQ
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61
Query: 1072 SYIDKIVVKYSMQNSK--RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYA 1131
Y ++I+ M + K LP + ++S + P P D + S VG+L Y
Sbjct: 62 KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQYL 121
Query: 1132 MLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRSVGFYVLKL-VDSKYN 1183
L TRPDI YAV IV + P LA + +K +L+Y++ F+ L + +SK N
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN 163
BLAST of Cmc03g0072871 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 68.2 bits (165), Expect = 5.3e-11
Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 0
Query: 438 TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKR 497
T L + K+ LWH RL H++ +E LVK G L + +SL CE C+ GK +
Sbjct: 56 TGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRV 115
Query: 498 PFTGKGHRAKEPLELVHSDLCGPMNV 524
F+ H K PL+ VHSDL G +V
Sbjct: 116 NFSTGQHTTKNPLDYVHSDLWGAPSV 141
BLAST of Cmc03g0072871 vs. TAIR 10
Match:
ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 54.7 bits (130), Expect = 6.1e-07
Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 0
Query: 618 NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHF 677
NRT+++ VRSM+ LP +F A TAV+I+N PS +++ P ++W + +
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 678 RIWGCPAHVLENNPKKLEPRSK 699
R +GC A++ + KL+PR+K
Sbjct: 62 RRFGCVAYI-HCDEGKLKPRAK 82
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK14550.1 | 0.0e+00 | 99.49 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0035879.1 | 0.0e+00 | 99.49 | gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi... | [more] |
KAA0047792.1 | 0.0e+00 | 99.40 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0054490.1 | 0.0e+00 | 99.40 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0031826.1 | 0.0e+00 | 99.40 | gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi... | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 3.6e-182 | 33.88 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 6.5e-123 | 28.20 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 1.8e-109 | 26.27 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.3e-107 | 25.78 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q12491 | 2.2e-25 | 22.91 | Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CPJ6 | 0.0e+00 | 99.49 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... | [more] |
A0A5D3CSZ6 | 0.0e+00 | 99.49 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032... | [more] |
A0A5A7TWB9 | 0.0e+00 | 99.40 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031... | [more] |
A0A5A7SMH8 | 0.0e+00 | 99.40 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... | [more] |
A0A5A7UGV2 | 0.0e+00 | 99.40 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 8.1e-60 | 35.31 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 9.3e-16 | 37.40 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00810.1 | 1.6e-15 | 37.36 | DNA/RNA polymerases superfamily protein | [more] |
ATMG00300.1 | 5.3e-11 | 39.53 | Gag-Pol-related retrotransposon family protein | [more] |
ATMG00710.1 | 6.1e-07 | 35.37 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |