Cmc03g0072421 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0072421
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 19619050 .. 19620093 (-)
RNA-Seq Expression	Cmc03g0072421
Synteny	Cmc03g0072421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATGTTGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCAACAGGCCCCATTACATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAACCAACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTCAGAGGCGTCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTAAGCGTACTGGAATGGAAGTGGGAAAACGTGTCGATGGATATCATTACAGGACTGCCAAGAAATCTGAGGGGTTTTACAGTGATTTGGGTTGTAGTTGACAGGCTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAACTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCATTGTCGATTTTTTCTGATAGAGATGCTCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTTTGGGCACGAGGTTAGACTTTAATATAGCTTTCCATCCACAGACTGAAGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGCAGTTCGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTTTCAAGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTGTTTGCTGGGGTATGTGGGTGAGCAGAGATTGA

mRNA sequence

ATGGCAAATGTTGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCAACAGGCCCCATTACATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAACCAACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTCAGAGGCGTCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTAAGCGTACTGGAATGGAAGTGGGAAAACGTGTCGATGGATATCATTACAGGACTGCCAAGAAATCTGAGGGGTTTTACAGTGATTTGGGTTGTAGTTGACAGGCTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAACTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCATTGTCGATTTTTTCTGATAGAGATGCTCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTTTGGGCACGAGGTTAGACTTTAATATAGCTTTCCATCCACAGACTGAAGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGCAGTTCGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTTTCAAGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTGTTTGCTGGGGTATGTGGGTGAGCAGAGATTGA

Coding sequence (CDS)

ATGGCAAATGTTGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCAACAGGCCCCATTACATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAACCAACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTCAGAGGCGTCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTAAGCGTACTGGAATGGAAGTGGGAAAACGTGTCGATGGATATCATTACAGGACTGCCAAGAAATCTGAGGGGTTTTACAGTGATTTGGGTTGTAGTTGACAGGCTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAACTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCATTGTCGATTTTTTCTGATAGAGATGCTCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTTTGGGCACGAGGTTAGACTTTAATATAGCTTTCCATCCACAGACTGAAGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGCAGTTCGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTTTCAAGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTGTTTGCTGGGGTATGTGGGTGAGCAGAGATTGA

Protein sequence

MANVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSMDIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIFSDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWGMWVSRD

Homology

[Close]

BLAST of Cmc03g0072421 vs. NCBI nr
Match: KAA0062835.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 657.5 bits (1695), Expect = 6.3e-185
Identity = 320/338 (94.67%), Postives = 332/338 (98.22%), Query Frame = 0


Query: 4   VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
           VADALSRKVSHSAALIT+QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS
Sbjct: 233 VADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 292

Query: 64  NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
           NDPYLVEKRGLAEAGQAVEFS+SSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 293 NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 352

Query: 124 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
           STKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 353 STKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 412

Query: 184 DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
           D ITGLPR LRGFTVIWVVVDRLTKSAHFVPGKSTYTA+KWAQLYMSEIVRLHGVP+SI 
Sbjct: 413 DFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTANKWAQLYMSEIVRLHGVPVSIV 472

Query: 244 SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
           SDRDARFTSKFWKGLQTA+GTRLDF+ AFHPQT+GQTERLNQVLE+MLRACALEFPGS D
Sbjct: 473 SDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLENMLRACALEFPGSWD 532

Query: 304 SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
           SHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSPVCWG
Sbjct: 533 SHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWG 570

[Close]

BLAST of Cmc03g0072421 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 657.5 bits (1695), Expect = 6.3e-185
Identity = 320/338 (94.67%), Postives = 330/338 (97.63%), Query Frame = 0


Query: 4    VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
            VADALSRKVSHSAALIT+QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS
Sbjct: 923  VADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 982

Query: 64   NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
            NDPYLVEKRGLAEAGQ  EFS+SSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 983  NDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 1042

Query: 124  STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
            STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 1043 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 1102

Query: 184  DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
            D ITGLPR LRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP+SI 
Sbjct: 1103 DFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV 1162

Query: 244  SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
            SDRDARFTSKFWKGLQTA+GTRLDF+ AFHPQT+GQTERLNQVLEDMLRACALEFPGS D
Sbjct: 1163 SDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD 1222

Query: 304  SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
            SHLHLMEFAYNNS+QATIGMAPFEALYG+CCRSPVCWG
Sbjct: 1223 SHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWG 1260

[Close]

BLAST of Cmc03g0072421 vs. NCBI nr
Match: KAA0051744.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 655.6 bits (1690), Expect = 2.4e-184
Identity = 321/338 (94.97%), Postives = 329/338 (97.34%), Query Frame = 0


Query: 4    VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
            VADALSRKVSHSAALIT+QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS
Sbjct: 803  VADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 862

Query: 64   NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
            NDPYLVEKRGLAEAGQA EFS+SSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 863  NDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 922

Query: 124  STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
            STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 923  STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 982

Query: 184  DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
            D ITGL R LRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP+SI 
Sbjct: 983  DFITGLSRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV 1042

Query: 244  SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
            SDRDARFTSKFWKGLQTA+GTRLDF  AFHPQT+GQTERLNQVLEDMLRACALEFPGS D
Sbjct: 1043 SDRDARFTSKFWKGLQTAMGTRLDFITAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD 1102

Query: 304  SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
            SHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSPVCWG
Sbjct: 1103 SHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWG 1140

[Close]

BLAST of Cmc03g0072421 vs. NCBI nr
Match: KAA0047043.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 655.6 bits (1690), Expect = 2.4e-184
Identity = 319/338 (94.38%), Postives = 330/338 (97.63%), Query Frame = 0


Query: 4   VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
           VADALSRKVSHSAALIT+QAPLHRDLERAEI VSVGAVT+QLA LTVQPTLRQRIIDAQS
Sbjct: 27  VADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAHLTVQPTLRQRIIDAQS 86

Query: 64  NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
           NDPYLVEKRGLAEAGQAVEFS+SSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 87  NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 146

Query: 124 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
           STKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 147 STKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 206

Query: 184 DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
           D ITGLPR LRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP+SI 
Sbjct: 207 DFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV 266

Query: 244 SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
           SDRDARFTSKFWKGLQTA+GTRLDF+ AFHPQT+GQTERLNQVLEDMLRACALEFPGS D
Sbjct: 267 SDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD 326

Query: 304 SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
           SHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSPVCWG
Sbjct: 327 SHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWG 364

[Close]

BLAST of Cmc03g0072421 vs. NCBI nr
Match: KAA0065438.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 654.4 bits (1687), Expect = 5.3e-184
Identity = 320/338 (94.67%), Postives = 329/338 (97.34%), Query Frame = 0


Query: 4   VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
           VADALSRKVSHSAALIT+QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS
Sbjct: 155 VADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 214

Query: 64  NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
           ND YLVEKRGLAE GQAVEFSISSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 215 NDSYLVEKRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 274

Query: 124 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
           STKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 275 STKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 334

Query: 184 DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
           D ITGLPR LRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP+SI 
Sbjct: 335 DFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV 394

Query: 244 SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
           SDRDARFTSKFWKGLQTA+GTRLDF+ AFHPQT+GQTERLNQVLEDMLRACALEFPGS D
Sbjct: 395 SDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD 454

Query: 304 SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
           SHLHLMEFAYNNS+QATI MAPFEALYGKCCRSPVCWG
Sbjct: 455 SHLHLMEFAYNNSYQATISMAPFEALYGKCCRSPVCWG 492

[Close]

BLAST of Cmc03g0072421 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 98/330 (29.70%), Postives = 171/330 (51.82%), Query Frame = 0


Query: 3    NVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ 62
            ++ADALSR       ++ +  P+ +D E   I          + Q+++    + +++   
Sbjct: 824  HIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEY 883

Query: 63   SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRR--LCVPSDSAVKTELLSEAHSSPFSM 122
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 884  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 943

Query: 123  HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWEN 182
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 944  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 1003

Query: 183  VSMDIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPL 242
            +SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 1004 LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1063

Query: 243  SIFSDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPG 302
             I +D D  FTS+ WK         + F++ + PQT+GQTER NQ +E +LR      P 
Sbjct: 1064 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1123

Query: 303  SSDSHLHLMEFAYNNSFQATIGMAPFEALY 331
            +   H+ L++ +YNN+  +   M PFE ++
Sbjct: 1124 TWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0072421 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 98/330 (29.70%), Postives = 171/330 (51.82%), Query Frame = 0


Query: 3    NVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ 62
            ++ADALSR       ++ +  P+ +D E   I          + Q+++    + +++   
Sbjct: 824  HIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEY 883

Query: 63   SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRR--LCVPSDSAVKTELLSEAHSSPFSM 122
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 884  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 943

Query: 123  HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWEN 182
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 944  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 1003

Query: 183  VSMDIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPL 242
            +SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 1004 LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1063

Query: 243  SIFSDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPG 302
             I +D D  FTS+ WK         + F++ + PQT+GQTER NQ +E +LR      P 
Sbjct: 1064 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1123

Query: 303  SSDSHLHLMEFAYNNSFQATIGMAPFEALY 331
            +   H+ L++ +YNN+  +   M PFE ++
Sbjct: 1124 TWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0072421 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 98/330 (29.70%), Postives = 171/330 (51.82%), Query Frame = 0


Query: 3    NVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ 62
            ++ADALSR       ++ +  P+ +D E   I          + Q+++    + +++   
Sbjct: 824  HIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEY 883

Query: 63   SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRR--LCVPSDSAVKTELLSEAHSSPFSM 122
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 884  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 943

Query: 123  HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWEN 182
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 944  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 1003

Query: 183  VSMDIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPL 242
            +SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 1004 LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1063

Query: 243  SIFSDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPG 302
             I +D D  FTS+ WK         + F++ + PQT+GQTER NQ +E +LR      P 
Sbjct: 1064 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1123

Query: 303  SSDSHLHLMEFAYNNSFQATIGMAPFEALY 331
            +   H+ L++ +YNN+  +   M PFE ++
Sbjct: 1124 TWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0072421 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 98/330 (29.70%), Postives = 171/330 (51.82%), Query Frame = 0


Query: 3    NVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ 62
            ++ADALSR       ++ +  P+ +D E   I          + Q+++    + +++   
Sbjct: 824  HIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEY 883

Query: 63   SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRR--LCVPSDSAVKTELLSEAHSSPFSM 122
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 884  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 943

Query: 123  HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWEN 182
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 944  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 1003

Query: 183  VSMDIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPL 242
            +SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 1004 LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1063

Query: 243  SIFSDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPG 302
             I +D D  FTS+ WK         + F++ + PQT+GQTER NQ +E +LR      P 
Sbjct: 1064 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1123

Query: 303  SSDSHLHLMEFAYNNSFQATIGMAPFEALY 331
            +   H+ L++ +YNN+  +   M PFE ++
Sbjct: 1124 TWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0072421 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 98/330 (29.70%), Postives = 171/330 (51.82%), Query Frame = 0


Query: 3    NVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ 62
            ++ADALSR       ++ +  P+ +D E   I          + Q+++    + +++   
Sbjct: 824  HIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEY 883

Query: 63   SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRR--LCVPSDSAVKTELLSEAHSSPFSM 122
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 884  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 943

Query: 123  HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWEN 182
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 944  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 1003

Query: 183  VSMDIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPL 242
            +SMD IT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 1004 LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1063

Query: 243  SIFSDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPG 302
             I +D D  FTS+ WK         + F++ + PQT+GQTER NQ +E +LR      P 
Sbjct: 1064 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1123

Query: 303  SSDSHLHLMEFAYNNSFQATIGMAPFEALY 331
            +   H+ L++ +YNN+  +   M PFE ++
Sbjct: 1124 TWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0072421 vs. ExPASy TrEMBL
Match: A0A5A7VAA9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold100G00010 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.0e-185
Identity = 320/338 (94.67%), Postives = 332/338 (98.22%), Query Frame = 0


Query: 4   VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
           VADALSRKVSHSAALIT+QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS
Sbjct: 233 VADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 292

Query: 64  NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
           NDPYLVEKRGLAEAGQAVEFS+SSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 293 NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 352

Query: 124 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
           STKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 353 STKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 412

Query: 184 DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
           D ITGLPR LRGFTVIWVVVDRLTKSAHFVPGKSTYTA+KWAQLYMSEIVRLHGVP+SI 
Sbjct: 413 DFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTANKWAQLYMSEIVRLHGVPVSIV 472

Query: 244 SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
           SDRDARFTSKFWKGLQTA+GTRLDF+ AFHPQT+GQTERLNQVLE+MLRACALEFPGS D
Sbjct: 473 SDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLENMLRACALEFPGSWD 532

Query: 304 SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
           SHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSPVCWG
Sbjct: 533 SHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWG 570

[Close]

BLAST of Cmc03g0072421 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.0e-185
Identity = 320/338 (94.67%), Postives = 330/338 (97.63%), Query Frame = 0


Query: 4    VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
            VADALSRKVSHSAALIT+QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS
Sbjct: 923  VADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 982

Query: 64   NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
            NDPYLVEKRGLAEAGQ  EFS+SSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 983  NDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 1042

Query: 124  STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
            STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 1043 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 1102

Query: 184  DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
            D ITGLPR LRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP+SI 
Sbjct: 1103 DFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV 1162

Query: 244  SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
            SDRDARFTSKFWKGLQTA+GTRLDF+ AFHPQT+GQTERLNQVLEDMLRACALEFPGS D
Sbjct: 1163 SDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD 1222

Query: 304  SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
            SHLHLMEFAYNNS+QATIGMAPFEALYG+CCRSPVCWG
Sbjct: 1223 SHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWG 1260

[Close]

BLAST of Cmc03g0072421 vs. ExPASy TrEMBL
Match: A0A5A7U8T5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001340 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.2e-184
Identity = 321/338 (94.97%), Postives = 329/338 (97.34%), Query Frame = 0


Query: 4    VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
            VADALSRKVSHSAALIT+QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS
Sbjct: 803  VADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 862

Query: 64   NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
            NDPYLVEKRGLAEAGQA EFS+SSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 863  NDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 922

Query: 124  STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
            STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 923  STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 982

Query: 184  DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
            D ITGL R LRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP+SI 
Sbjct: 983  DFITGLSRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV 1042

Query: 244  SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
            SDRDARFTSKFWKGLQTA+GTRLDF  AFHPQT+GQTERLNQVLEDMLRACALEFPGS D
Sbjct: 1043 SDRDARFTSKFWKGLQTAMGTRLDFITAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD 1102

Query: 304  SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
            SHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSPVCWG
Sbjct: 1103 SHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWG 1140

[Close]

BLAST of Cmc03g0072421 vs. ExPASy TrEMBL
Match: A0A5A7TU00 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.2e-184
Identity = 319/338 (94.38%), Postives = 330/338 (97.63%), Query Frame = 0


Query: 4   VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
           VADALSRKVSHSAALIT+QAPLHRDLERAEI VSVGAVT+QLA LTVQPTLRQRIIDAQS
Sbjct: 27  VADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAHLTVQPTLRQRIIDAQS 86

Query: 64  NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
           NDPYLVEKRGLAEAGQAVEFS+SSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 87  NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 146

Query: 124 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
           STKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 147 STKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 206

Query: 184 DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
           D ITGLPR LRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP+SI 
Sbjct: 207 DFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV 266

Query: 244 SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
           SDRDARFTSKFWKGLQTA+GTRLDF+ AFHPQT+GQTERLNQVLEDMLRACALEFPGS D
Sbjct: 267 SDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD 326

Query: 304 SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
           SHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSPVCWG
Sbjct: 327 SHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWG 364

[Close]

BLAST of Cmc03g0072421 vs. ExPASy TrEMBL
Match: A0A5A7VCT0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001190 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.6e-184
Identity = 320/338 (94.67%), Postives = 329/338 (97.34%), Query Frame = 0


Query: 4   VADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 63
           VADALSRKVSHSAALIT+QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS
Sbjct: 155 VADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQS 214

Query: 64  NDPYLVEKRGLAEAGQAVEFSISSDGGLLFQRRLCVPSDSAVKTELLSEAHSSPFSMHPG 123
           ND YLVEKRGLAE GQAVEFSISSDGGLLF+RRLCVPSDSAVKTELLSEAHSSPFSMHPG
Sbjct: 215 NDSYLVEKRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG 274

Query: 124 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVLEWKWENVSM 183
           STKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWENVSM
Sbjct: 275 STKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM 334

Query: 184 DIITGLPRNLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPLSIF 243
           D ITGLPR LRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP+SI 
Sbjct: 335 DFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV 394

Query: 244 SDRDARFTSKFWKGLQTALGTRLDFNIAFHPQTEGQTERLNQVLEDMLRACALEFPGSSD 303
           SDRDARFTSKFWKGLQTA+GTRLDF+ AFHPQT+GQTERLNQVLEDMLRACALEFPGS D
Sbjct: 395 SDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD 454

Query: 304 SHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPVCWG 342
           SHLHLMEFAYNNS+QATI MAPFEALYGKCCRSPVCWG
Sbjct: 455 SHLHLMEFAYNNSYQATISMAPFEALYGKCCRSPVCWG 492

The following BLAST results are available for this feature:

BLAST of Cmc03g0072421 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062835.1	6.3e-185	94.67	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051368.1	6.3e-185	94.67	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051744.1	2.4e-184	94.97	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0047043.1	2.4e-184	94.38	pol protein [Cucumis melo var. makuwa]	[more]
KAA0065438.1	5.3e-184	94.67	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0072421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.2e-42	29.70	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.2e-42	29.70	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-42	29.70	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.2e-42	29.70	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.2e-42	29.70	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0072421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAA9	3.0e-185	94.67	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold100G00010 PE...	[more]
A0A5A7U7V9	3.0e-185	94.67	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7U8T5	1.2e-184	94.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60...	[more]
A0A5A7TU00	1.2e-184	94.38	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE...	[more]
A0A5A7VCT0	2.6e-184	94.67	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001190 PE...	[more]

BLAST of Cmc03g0072421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 68..158 e-value: 9.5E-19 score: 69.4
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 96..327
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 170..341 e-value: 1.2E-41 score: 144.2
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 103..159 e-value: 1.2E-17 score: 63.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 166..333 score: 17.908033
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 171..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0072421.1	Cmc03g0072421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding