Cmc03g0071091 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0071091
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 17201683 .. 17202657 (+)
RNA-Seq Expression	Cmc03g0071091
Synteny	Cmc03g0071091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAGATGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGGGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGTTGCCCAGCTGGAGGATCCTTACTTGGTCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGAACTTTTCCATATCCTCCGACGATGGCCTTATGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGAGTAGTCAAGACAGAGCTTTTGTCTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGCACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGAAACATGAAGAGGGAAGTGGCAGACTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGTCCAGCCGGGTTGTTGCAACCCTCGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTTTCGATGGATTTTATTACGAGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACCGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCTATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCTTTAGGTACGAGGTTAGACTTCAGCACGACATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATTCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGA

mRNA sequence

ATGAGGCAGATGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGGGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGTTGCCCAGCTGGAGGATCCTTACTTGGTCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGAACTTTTCCATATCCTCCGACGATGGCCTTATGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGAGTAGTCAAGACAGAGCTTTTGTCTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGCACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGAAACATGAAGAGGGAAGTGGCAGACTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGTCCAGCCGGGTTGTTGCAACCCTCGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTTTCGATGGATTTTATTACGAGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACCGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCTATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCTTTAGGTACGAGGTTAGACTTCAGCACGACATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATTCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGA

Coding sequence (CDS)

ATGAGGCAGATGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGGGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGTTGCCCAGCTGGAGGATCCTTACTTGGTCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGAACTTTTCCATATCCTCCGACGATGGCCTTATGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGAGTAGTCAAGACAGAGCTTTTGTCTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGCACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGAAACATGAAGAGGGAAGTGGCAGACTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGTCCAGCCGGGTTGTTGCAACCCTCGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTTTCGATGGATTTTATTACGAGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACCGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCTATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCTTTAGGTACGAGGTTAGACTTCAGCACGACATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATTCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGA

Protein sequence

MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRLCVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDILRACVLEFSGS

Homology

[Close]

BLAST of Cmc03g0071091 vs. NCBI nr
Match: KAA0035204.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 647.5 bits (1669), Expect = 6.1e-182
Identity = 318/324 (98.15%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 1    MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 903  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 962

Query: 61   VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
            VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL
Sbjct: 963  VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 1022

Query: 121  CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPED VVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADF+SRCLVCQQV
Sbjct: 1023 CVPEDSVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFISRCLVCQQV 1082

Query: 181  KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQRPAGLLQP SVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1083 KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1142

Query: 241  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
            TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD
Sbjct: 1143 TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 1202

Query: 301  GQTERLNQILEDILRACVLEFSGS 325
            GQTERLNQILED+LRACVLEFSGS
Sbjct: 1203 GQTERLNQILEDMLRACVLEFSGS 1226

[Close]

BLAST of Cmc03g0071091 vs. NCBI nr
Match: KAA0035890.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 629.8 bits (1623), Expect = 1.3e-176
Identity = 309/324 (95.37%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
           MRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 507 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 566

Query: 61  VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
           VGEVTAQLAQLSVQPTLRQKII AQL DPYL EKRRMVETGQGE+FSISSDDGLMFEGRL
Sbjct: 567 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 626

Query: 121 CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPED  VK ELL+EAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 627 CVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 686

Query: 181 KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ PAGLLQP SVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 687 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 746

Query: 241 TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
           TYTASKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFSTTFHPQTD
Sbjct: 747 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTD 806

Query: 301 GQTERLNQILEDILRACVLEFSGS 325
           GQTERLNQILED+LRACVLEFSGS
Sbjct: 807 GQTERLNQILEDMLRACVLEFSGS 830

[Close]

BLAST of Cmc03g0071091 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 628.2 bits (1619), Expect = 3.8e-176
Identity = 308/324 (95.06%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
           MRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
           VGEVTAQLAQLSVQPTLRQKII AQL DPYL EKRRMVETGQGE+FSISSDDGLMFEGRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPED  VKTELL+EAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ PAGLLQP SVPGWKWESVSMDFIT LPKTLKG+TVIWVVVDRLTKSAHFVPGKS
Sbjct: 437 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGKS 496

Query: 241 TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
           TYTASKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTD
Sbjct: 497 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 556

Query: 301 GQTERLNQILEDILRACVLEFSGS 325
           GQTERLNQILED+LRACVLEFSGS
Sbjct: 557 GQTERLNQILEDMLRACVLEFSGS 580

[Close]

BLAST of Cmc03g0071091 vs. NCBI nr
Match: TYK05193.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 626.7 bits (1615), Expect = 1.1e-175
Identity = 307/324 (94.75%), Postives = 313/324 (96.60%), Query Frame = 0


Query: 1    MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQ RWL+LVKDYDCEI+YHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 1012 MRQRRWLKLVKDYDCEIMYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 1071

Query: 61   VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
            VGEVT+QLAQLSVQPTLRQKIIVAQL DPYLVEKRRMVETG GENFSIS DDGLMFEG L
Sbjct: 1072 VGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGPGENFSISPDDGLMFEGCL 1131

Query: 121  CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPED  VKTELL+EAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 1132 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 1191

Query: 181  KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ PAGLLQP SVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1192 KAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1251

Query: 241  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
            TYTASKWGQLYMTE+VRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD
Sbjct: 1252 TYTASKWGQLYMTEVVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 1311

Query: 301  GQTERLNQILEDILRACVLEFSGS 325
            GQTERLNQILED+LRACVLEFSGS
Sbjct: 1312 GQTERLNQILEDMLRACVLEFSGS 1335

[Close]

BLAST of Cmc03g0071091 vs. NCBI nr
Match: KAA0042912.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 625.9 bits (1613), Expect = 1.9e-175
Identity = 307/324 (94.75%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1    MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 836  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 895

Query: 61   VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
            VGEVTAQLAQLSVQPTLRQKII AQL DPYL EKRRMVETGQGE+FSISSDDGLMFEGRL
Sbjct: 896  VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 955

Query: 121  CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPED  VKTELL+EAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 956  CVPEDTAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1015

Query: 181  KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ PAGLLQP SVPGWKWESVSM FIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1016 KAPRQHPAGLLQPLSVPGWKWESVSMGFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1075

Query: 241  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
            TYTASKWGQLY+TEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTD
Sbjct: 1076 TYTASKWGQLYITEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1135

Query: 301  GQTERLNQILEDILRACVLEFSGS 325
            GQTERLNQILED+LRACVLEFSGS
Sbjct: 1136 GQTERLNQILEDMLRACVLEFSGS 1159

[Close]

BLAST of Cmc03g0071091 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-41
Identity = 100/319 (31.35%), Postives = 161/319 (50.47%), Query Frame = 0


Query: 2    RQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGR-- 121
                  + Q+S+    + +++     D  L+      +    EN  +   DGL+   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGLLINSKDQ 919

Query: 122  LCVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D  +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP       WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQT 301
             + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDILRACV 319
            DGQTER NQ +E +LR CV
Sbjct: 1100 DGQTERTNQTVEKLLR-CV 1099

[Close]

BLAST of Cmc03g0071091 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-41
Identity = 100/319 (31.35%), Postives = 161/319 (50.47%), Query Frame = 0


Query: 2    RQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGR-- 121
                  + Q+S+    + +++     D  L+      +    EN  +   DGL+   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGLLINSKDQ 919

Query: 122  LCVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D  +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP       WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQT 301
             + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDILRACV 319
            DGQTER NQ +E +LR CV
Sbjct: 1100 DGQTERTNQTVEKLLR-CV 1099

[Close]

BLAST of Cmc03g0071091 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-41
Identity = 100/319 (31.35%), Postives = 161/319 (50.47%), Query Frame = 0


Query: 2    RQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGR-- 121
                  + Q+S+    + +++     D  L+      +    EN  +   DGL+   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGLLINSKDQ 919

Query: 122  LCVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D  +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP       WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQT 301
             + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDILRACV 319
            DGQTER NQ +E +LR CV
Sbjct: 1100 DGQTERTNQTVEKLLR-CV 1099

[Close]

BLAST of Cmc03g0071091 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-41
Identity = 100/319 (31.35%), Postives = 161/319 (50.47%), Query Frame = 0


Query: 2    RQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGR-- 121
                  + Q+S+    + +++     D  L+      +    EN  +   DGL+   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGLLINSKDQ 919

Query: 122  LCVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D  +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP       WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQT 301
             + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDILRACV 319
            DGQTER NQ +E +LR CV
Sbjct: 1100 DGQTERTNQTVEKLLR-CV 1099

[Close]

BLAST of Cmc03g0071091 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-41
Identity = 100/319 (31.35%), Postives = 161/319 (50.47%), Query Frame = 0


Query: 2    RQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGR-- 121
                  + Q+S+    + +++     D  L+      +    EN  +   DGL+   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGLLINSKDQ 919

Query: 122  LCVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D  +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP       WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQT 301
             + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDILRACV 319
            DGQTER NQ +E +LR CV
Sbjct: 1100 DGQTERTNQTVEKLLR-CV 1099

[Close]

BLAST of Cmc03g0071091 vs. ExPASy TrEMBL
Match: A0A5A7SVA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold346G00290 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 2.9e-182
Identity = 318/324 (98.15%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 1    MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 903  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 962

Query: 61   VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
            VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL
Sbjct: 963  VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 1022

Query: 121  CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPED VVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADF+SRCLVCQQV
Sbjct: 1023 CVPEDSVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFISRCLVCQQV 1082

Query: 181  KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQRPAGLLQP SVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1083 KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1142

Query: 241  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
            TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD
Sbjct: 1143 TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 1202

Query: 301  GQTERLNQILEDILRACVLEFSGS 325
            GQTERLNQILED+LRACVLEFSGS
Sbjct: 1203 GQTERLNQILEDMLRACVLEFSGS 1226

[Close]

BLAST of Cmc03g0071091 vs. ExPASy TrEMBL
Match: A0A5A7SXW6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00560 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 6.3e-177
Identity = 309/324 (95.37%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
           MRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 507 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 566

Query: 61  VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
           VGEVTAQLAQLSVQPTLRQKII AQL DPYL EKRRMVETGQGE+FSISSDDGLMFEGRL
Sbjct: 567 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 626

Query: 121 CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPED  VK ELL+EAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 627 CVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 686

Query: 181 KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ PAGLLQP SVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 687 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 746

Query: 241 TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
           TYTASKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFSTTFHPQTD
Sbjct: 747 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTD 806

Query: 301 GQTERLNQILEDILRACVLEFSGS 325
           GQTERLNQILED+LRACVLEFSGS
Sbjct: 807 GQTERLNQILEDMLRACVLEFSGS 830

[Close]

BLAST of Cmc03g0071091 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 1.8e-176
Identity = 308/324 (95.06%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
           MRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
           VGEVTAQLAQLSVQPTLRQKII AQL DPYL EKRRMVETGQGE+FSISSDDGLMFEGRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPED  VKTELL+EAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ PAGLLQP SVPGWKWESVSMDFIT LPKTLKG+TVIWVVVDRLTKSAHFVPGKS
Sbjct: 437 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGKS 496

Query: 241 TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
           TYTASKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTD
Sbjct: 497 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 556

Query: 301 GQTERLNQILEDILRACVLEFSGS 325
           GQTERLNQILED+LRACVLEFSGS
Sbjct: 557 GQTERLNQILEDMLRACVLEFSGS 580

[Close]

BLAST of Cmc03g0071091 vs. ExPASy TrEMBL
Match: A0A5D3BZN1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00670 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 5.4e-176
Identity = 307/324 (94.75%), Postives = 313/324 (96.60%), Query Frame = 0


Query: 1    MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQ RWL+LVKDYDCEI+YHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 1012 MRQRRWLKLVKDYDCEIMYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 1071

Query: 61   VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
            VGEVT+QLAQLSVQPTLRQKIIVAQL DPYLVEKRRMVETG GENFSIS DDGLMFEG L
Sbjct: 1072 VGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGPGENFSISPDDGLMFEGCL 1131

Query: 121  CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPED  VKTELL+EAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 1132 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 1191

Query: 181  KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ PAGLLQP SVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1192 KAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1251

Query: 241  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
            TYTASKWGQLYMTE+VRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD
Sbjct: 1252 TYTASKWGQLYMTEVVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 1311

Query: 301  GQTERLNQILEDILRACVLEFSGS 325
            GQTERLNQILED+LRACVLEFSGS
Sbjct: 1312 GQTERLNQILEDMLRACVLEFSGS 1335

[Close]

BLAST of Cmc03g0071091 vs. ExPASy TrEMBL
Match: A0A5A7THM7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004320 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.2e-176
Identity = 307/324 (94.75%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1    MRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 836  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 895

Query: 61   VGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGLMFEGRL 120
            VGEVTAQLAQLSVQPTLRQKII AQL DPYL EKRRMVETGQGE+FSISSDDGLMFEGRL
Sbjct: 896  VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 955

Query: 121  CVPEDRVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPED  VKTELL+EAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 956  CVPEDTAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1015

Query: 181  KAPRQRPAGLLQPSSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ PAGLLQP SVPGWKWESVSM FIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1016 KAPRQHPAGLLQPLSVPGWKWESVSMGFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1075

Query: 241  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTD 300
            TYTASKWGQLY+TEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTD
Sbjct: 1076 TYTASKWGQLYITEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1135

Query: 301  GQTERLNQILEDILRACVLEFSGS 325
            GQTERLNQILED+LRACVLEFSGS
Sbjct: 1136 GQTERLNQILEDMLRACVLEFSGS 1159

The following BLAST results are available for this feature:

BLAST of Cmc03g0071091 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035204.1	6.1e-182	98.15	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0035890.1	1.3e-176	95.37	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040942.1	3.8e-176	95.06	pol protein [Cucumis melo var. makuwa]	[more]
TYK05193.1	1.1e-175	94.75	pol protein [Cucumis melo var. makuwa]	[more]
KAA0042912.1	1.9e-175	94.75	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0071091 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.2e-41	31.35	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.2e-41	31.35	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.2e-41	31.35	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.2e-41	31.35	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.2e-41	31.35	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0071091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVA8	2.9e-182	98.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5A7SXW6	6.3e-177	95.37	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56...	[more]
A0A5A7TBV4	1.8e-176	95.06	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]
A0A5D3BZN1	5.4e-176	94.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14...	[more]
A0A5A7THM7	9.2e-176	94.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44...	[more]

BLAST of Cmc03g0071091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 90..181 e-value: 1.9E-18 score: 68.5
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 119..318
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 129..182 e-value: 3.3E-17 score: 62.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 191..323 e-value: 1.9E-30 score: 107.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 193..324 score: 16.22312
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 196..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0071091.1	Cmc03g0071091.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding