Cmc03g0070591 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0070591
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	U2 snRNP auxiliary factor large subunit
Location	CMiso1.1chr03: 16453600 .. 16457423 (-)
RNA-Seq Expression	Cmc03g0070591
Synteny	Cmc03g0070591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGCAGGAATATCCTTTTGTATTATTTAACTGCTTTTCTTTGTTGAATATAGTGTGGAAAGTTGACAACAAATTGCATGGTGTCATTGGGTAAGCTATATTTTGTTCCTTAATCTGCATATGTAGTCATTTAAACATGTGGTCTTTGGACGGGCTAATGCTATTATTTATTATTTACTTGGTACACTCATTCTGGAACTGAGAGGTATTTTGGTTTTTGTTGCTTGTGTTTGGTGTTTGTTTGTTGTTTTGTTTCTATGTCTCGTCCAATTTTGTGAGAAGGCAATGTTGGACTACTTGCCCCTCTGTGCTGACAATGGGCGTGAGCTGACTTCTGTAGCTTTTATGTGCAAGAAGGACCAATGCACCAGTCAGATGGATCTTGTTCGTCTTCATCTGGAAACTTATTCCTTTTTGGGTAGTCTTACAAATATTTCTCAGAATTTGTACATGTATAAAATTTGTATGCGTAAATAATTTGTTGGAAGAGGTTAAGTTACACCATATCTGTTTTGTGAAGCATGTAAGTAGGTTCAGGTGATACTTGAATCTTTCGCGTGTGGCAATGTTGTTCGGTTGAATTGTGATTATTTTCTTAGATTTAGCCTAATTTCTTTAGCAGGCCAGATTCCTGGGGCAACTCCAGCTATTCCTGGAATGTTTCCTACAATGTTTCCACTGGCGACCGGTCAGGTAATTCTGCTTATCCCTGATTTAAAAGCATGGAAAATACACAATCTTTAGGCAAATGGCATTATTAGTTATTGAATAGAATGTTTTTTTATTGAAATAAATGGCTTTCATTGAGAAAATGTACAATACCCTAACCCTATTTGATACAATGTATATACTTGTATTCATGTTGTTACTTTTTGTTTGTTTTCATGCAGCCCTTTGGGGCACTTCCTGTTATGCCGGTTCAGGCAATGACACAGCAGGTAATATTCAGTACCATTGTCATCTCCCTATTTTTGGTTGTATGCATTTTAATAGTGTAAAAATTTTAAACTTTTTGGTGCATGTTCTGTTGTTAGGCTACTAGACATGCACGACGTGTTTATGTGGGCGGGCTACCACCAACAGCCAACGAACAGGTTTTTGCACCTATTGTTACTCTCGTTTAATATTTTAAAGTCCAAATCATCCCATATTTTCTTGTCCAAAGATCACCATTTGTGCATCCAATTGCAGTTTAGCTAATTTGGTTTGTGTAGATTTTGGTTTCCAGTAATATTTTAATTCTGCCTTGCCAAATGCAATATATCACTCTATTCATAGAAAATTTTGAAGAACTTATAATTCTTGGCTATGTTTTTTCCTCTCCCTTTCTCATGCGCAGTTTTTGATAACCTTGGCTTTTTTTTCCTTTTCATTTTCATGTTTTTTTAGCTATTTACCCGAGGCATACTGGAAAAAGTTGTTCATGTAACAGCCAACAGGATGCCATATTTATTATTTAGTCACAGAGTTCATTTGTTGTTTGCAGTCTGTTGCAACATTTTTCAGTCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGCCCTGGTGTGGTGTTTTTTTTTAAAGATTTTTTTAATTAATACGTATACGGTAACTGTCTGGGTGGTGTTCGGTATTGCCATATTAAGTTAATTACCTTATGCGTTAGCCATCTATGATTTATAGGAGATGCGGTTGTCAATGTATATATTAATCATGAGAAAAAGTTCGCTTTTGTGGAGATGAGATCTGTTGAGGAAGCCAGTAATGCAATGGCATTGGATGGGATCATCTTTGAGGTACTTGGTTTGTCATTGACTATTTTCATATCCATATTTTATGCTCAAAATAAATTTACTGTGCAAAATAGTTTTCTTATTTGTTATTATTGTTCAATTAGGGAGCACCTGTGAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACTCTTGGTCCCAGCCAGCCAAACCCCAATCTGAACCTAGCTGCTGTTGGTCTAACTCCAGGTTCCGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTGAGGGAGTTGCTGGAGTCTTTTGGGCCCCTACGAGGTTTTGATCTCGTGAAAGACAGAGAGACTGGAAATTCAAAAGGATATGCATTTTGTGTTTACCAAGATCTTTCAGTCACAGACATAGCCTGTGCAGCACTCAATGGTATTAAAATGGGTGATAAGACACTCACTGTTCGGCGTGCAAATCAAGGAGCCAATCAACCCAAACCAGAGCAAGAAAGTGTTCTTTTACATGCACAGCAGCAAATTGCTTTACAGGTGGGTGAATTTTGAATAAATGCATGCAATTGCCTCCTTTTTACCAAAGAATTTTTAAATACCCGTTCATCATTAAAATTATCATTACATATTTTTATTCTAGTCTTGAATAACTTGGGGGAATAAGGAGGCTAATTGCGTATCTCTTCATTGAACTTGTGATTCAACCAGCATATGGTTTAGTTTTTTGGAGCGCTCCGAAGGACTGAAAATTCTCAGCATATTATTGTAAAATGTAAGAGAACCTAAAAAGTGACAAATAACTTGTAGTGGTTGCAAGGATGTGGTTTGTTTCCTTCTCTTGCTTGCATTGAAAGTTTACGTAGTAATCATCATTAAGAATTAGACATGAAATCTGGTCCCGCCTATTATATCAGAACCGACAGAAGTCCAGGGTTAATTTTTTATTCTCCATCTATGTCTCAGTATGGTACACTTGTTTTTTTGTTTTAATAATTGTGCAATGGTATTATTTTTTGTTTTATAGCTTTCTTACCGTATTCCTTTCTCAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTTTGTCTTACACAAGTTGTTACCCCTGAAGAGCTAATTAATGATGAAGACTACGAAGATATCATGGAGGACATGCGAGGGGAAGGCGGAAAATTTGGTAAACAAACTAATCTATTGATTGTGGTCCTATCATCATAGATTCTATATTTTGTTTTTAAACTTTAAAGCTTCATGCTACTCATTGGTTTCTTGTTTGTGTTTTTTTGTGTGTGATATCTCTGTTTTACAGCCTTTTCTTGTCCTCACATTCTGGTAGAAAGAATCAGACAAATAACTTACAGACAGAAGCCTCCATAATCTTCTTTGTTTATACACCCGCCCAATGCGTCCTTACTTGATTCTGCAAATTTGTGGTTTCAAGTGGCTTTTATTGTCTTTGCAGGTACATTAGTGAACGTCGTTATCCCGCGTCCAAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGCATGATCTTTGAACCATATTTTTTCATTTGTTTCCTCTTTTTTCATAATTTGGAAATGTAATCTCATCATCCAGGGTTTTGTTTTGTGTTATATCAGGTGTTTTTGGAGTATGCAGACATTGATAGCGCAACGAAAGCTCGAGCTGGTTTGAATGGGAGAAAATTTGGAGGGAACCAAGTGATGGCTGTATTCTATCCTGAGAACAAGTTTGCCCAAGGGGAGTATGATGCCTAAACATCATCAAATTTGACAGTGATTGGACAAGTTGTGTCATTAGAAGAAAGAAGAGAATATTTAGGTTTGTTTTAAATGTGGGGGTAAGTTTGTGTGCTAATCTGGAAGAACTCGAATAGCAAAGTGAGTAATGCAAGTGACCTTAGATCCATCTAGATTGTTAGATTTCTATCATTTTGGAAAAGTAATGGACAGCTTCATCAAACTCTAATCTCTACTTTTGATTTGTGGAAGCATATTATTATTATTATTTAATCTCTCCA

mRNA sequence

GTGCAGGAATATCCTTTTGTATTATTTAACTGCTTTTCTTTGTTGAATATAGTGTGGAAAGTTGACAACAAATTGCATGGTGTCATTGGGCAATGTTGGACTACTTGCCCCTCTGTGCTGACAATGGGCGTGAGCTGACTTCTGTAGCTTTTATGTGCAAGAAGGACCAATGCACCAGTCAGATGGATCTTGTTCGTCTTCATCTGGAAACTTATTCCTTTTTGGGTAGCCAGATTCCTGGGGCAACTCCAGCTATTCCTGGAATGTTTCCTACAATGTTTCCACTGGCGACCGGTCAGCCCTTTGGGGCACTTCCTGTTATGCCGGTTCAGGCAATGACACAGCAGGCTACTAGACATGCACGACGTGTTTATGTGGGCGGGCTACCACCAACAGCCAACGAACAGTCTGTTGCAACATTTTTCAGTCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGCCCTGGAGATGCGGTTGTCAATGTATATATTAATCATGAGAAAAAGTTCGCTTTTGTGGAGATGAGATCTGTTGAGGAAGCCAGTAATGCAATGGCATTGGATGGGATCATCTTTGAGGGAGCACCTGTGAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACTCTTGGTCCCAGCCAGCCAAACCCCAATCTGAACCTAGCTGCTGTTGGTCTAACTCCAGGTTCCGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTGAGGGAGTTGCTGGAGTCTTTTGGGCCCCTACGAGGTTTTGATCTCGTGAAAGACAGAGAGACTGGAAATTCAAAAGGATATGCATTTTGTGTTTACCAAGATCTTTCAGTCACAGACATAGCCTGTGCAGCACTCAATGGTATTAAAATGGGTGATAAGACACTCACTGTTCGGCGTGCAAATCAAGGAGCCAATCAACCCAAACCAGAGCAAGAAAGTGTTCTTTTACATGCACAGCAGCAAATTGCTTTACAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTTTGTCTTACACAAGTTGTTACCCCTGAAGAGCTAATTAATGATGAAGACTACGAAGATATCATGGAGGACATGCGAGGGGAAGGCGGAAAATTTGGTACATTAGTGAACGTCGTTATCCCGCGTCCAAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGTGTTTTTGGAGTATGCAGACATTGATAGCGCAACGAAAGCTCGAGCTGGTTTGAATGGGAGAAAATTTGGAGGGAACCAAGTGATGGCTGTATTCTATCCTGAGAACAAGTTTGCCCAAGGGGAGTATGATGCCTAAACATCATCAAATTTGACAGTGATTGGACAAGTTGTGTCATTAGAAGAAAGAAGAGAATATTTAGGTTTGTTTTAAATGTGGGGGTAAGTTTGTGTGCTAATCTGGAAGAACTCGAATAGCAAAGTGAGTAATGCAAGTGACCTTAGATCCATCTAGATTGTTAGATTTCTATCATTTTGGAAAAGTAATGGACAGCTTCATCAAACTCTAATCTCTACTTTTGATTTGTGGAAGCATATTATTATTATTATTTAATCTCTCCA

Coding sequence (CDS)

ATGTTGGACTACTTGCCCCTCTGTGCTGACAATGGGCGTGAGCTGACTTCTGTAGCTTTTATGTGCAAGAAGGACCAATGCACCAGTCAGATGGATCTTGTTCGTCTTCATCTGGAAACTTATTCCTTTTTGGGTAGCCAGATTCCTGGGGCAACTCCAGCTATTCCTGGAATGTTTCCTACAATGTTTCCACTGGCGACCGGTCAGCCCTTTGGGGCACTTCCTGTTATGCCGGTTCAGGCAATGACACAGCAGGCTACTAGACATGCACGACGTGTTTATGTGGGCGGGCTACCACCAACAGCCAACGAACAGTCTGTTGCAACATTTTTCAGTCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGCCCTGGAGATGCGGTTGTCAATGTATATATTAATCATGAGAAAAAGTTCGCTTTTGTGGAGATGAGATCTGTTGAGGAAGCCAGTAATGCAATGGCATTGGATGGGATCATCTTTGAGGGAGCACCTGTGAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACTCTTGGTCCCAGCCAGCCAAACCCCAATCTGAACCTAGCTGCTGTTGGTCTAACTCCAGGTTCCGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTGAGGGAGTTGCTGGAGTCTTTTGGGCCCCTACGAGGTTTTGATCTCGTGAAAGACAGAGAGACTGGAAATTCAAAAGGATATGCATTTTGTGTTTACCAAGATCTTTCAGTCACAGACATAGCCTGTGCAGCACTCAATGGTATTAAAATGGGTGATAAGACACTCACTGTTCGGCGTGCAAATCAAGGAGCCAATCAACCCAAACCAGAGCAAGAAAGTGTTCTTTTACATGCACAGCAGCAAATTGCTTTACAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTTTGTCTTACACAAGTTGTTACCCCTGAAGAGCTAATTAATGATGAAGACTACGAAGATATCATGGAGGACATGCGAGGGGAAGGCGGAAAATTTGGTACATTAGTGAACGTCGTTATCCCGCGTCCAAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGTGTTTTTGGAGTATGCAGACATTGATAGCGCAACGAAAGCTCGAGCTGGTTTGAATGGGAGAAAATTTGGAGGGAACCAAGTGATGGCTGTATTCTATCCTGAGAACAAGTTTGCCCAAGGGGAGTATGATGCCTAA

Protein sequence

MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA

Homology

[Close]

BLAST of Cmc03g0070591 vs. NCBI nr
Match: XP_016900124.1 (PREDICTED: splicing factor U2af large subunit B-like isoform X5 [Cucumis melo] >XP_016900125.1 PREDICTED: splicing factor U2af large subunit B-like isoform X5 [Cucumis melo])

HSP 1 Score: 846.3 bits (2185), Expect = 1.2e-241
Identity = 422/424 (99.53%), Postives = 422/424 (99.53%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFL  QIPGATPAIPGMFP
Sbjct: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLAGQIPGATPAIPGMFP 60

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES
Sbjct: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL
Sbjct: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG
Sbjct: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420

Query: 421 EYDA 425
           EYDA
Sbjct: 421 EYDA 424

[Close]

BLAST of Cmc03g0070591 vs. NCBI nr
Match: XP_016900126.1 (PREDICTED: splicing factor U2af large subunit B-like isoform X6 [Cucumis melo])

HSP 1 Score: 843.6 bits (2178), Expect = 7.6e-241
Identity = 423/424 (99.76%), Postives = 423/424 (99.76%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLG QIPGATPAIPGMFP
Sbjct: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLG-QIPGATPAIPGMFP 60

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES
Sbjct: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL
Sbjct: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG
Sbjct: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420

Query: 421 EYDA 425
           EYDA
Sbjct: 421 EYDA 423

[Close]

BLAST of Cmc03g0070591 vs. NCBI nr
Match: XP_011656485.1 (splicing factor U2af large subunit A isoform X1 [Cucumis sativus])

HSP 1 Score: 843.2 bits (2177), Expect = 9.9e-241
Identity = 420/424 (99.06%), Postives = 420/424 (99.06%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCADNGRELTSVAFMCKKDQCT QMDLVRLHLETYSFL  QIPG TPAIPGMFP
Sbjct: 200 MLDYLPLCADNGRELTSVAFMCKKDQCTGQMDLVRLHLETYSFLAGQIPGTTPAIPGMFP 259

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 260 TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 319

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 320 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 379

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 380 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 439

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES
Sbjct: 440 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 499

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL
Sbjct: 500 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 559

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG
Sbjct: 560 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 619

Query: 421 EYDA 425
           EYDA
Sbjct: 620 EYDA 623

[Close]

BLAST of Cmc03g0070591 vs. NCBI nr
Match: XP_011656495.1 (splicing factor U2af large subunit B isoform X8 [Cucumis sativus] >XP_031742967.1 splicing factor U2af large subunit B isoform X8 [Cucumis sativus])

HSP 1 Score: 843.2 bits (2177), Expect = 9.9e-241
Identity = 420/424 (99.06%), Postives = 420/424 (99.06%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCADNGRELTSVAFMCKKDQCT QMDLVRLHLETYSFL  QIPG TPAIPGMFP
Sbjct: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTGQMDLVRLHLETYSFLAGQIPGTTPAIPGMFP 60

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES
Sbjct: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL
Sbjct: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG
Sbjct: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420

Query: 421 EYDA 425
           EYDA
Sbjct: 421 EYDA 424

[Close]

BLAST of Cmc03g0070591 vs. NCBI nr
Match: XP_011656487.1 (splicing factor U2af large subunit A isoform X3 [Cucumis sativus])

HSP 1 Score: 840.5 bits (2170), Expect = 6.4e-240
Identity = 421/424 (99.29%), Postives = 421/424 (99.29%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCADNGRELTSVAFMCKKDQCT QMDLVRLHLETYSFLG QIPG TPAIPGMFP
Sbjct: 200 MLDYLPLCADNGRELTSVAFMCKKDQCTGQMDLVRLHLETYSFLG-QIPGTTPAIPGMFP 259

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 260 TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 319

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 320 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 379

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 380 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 439

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES
Sbjct: 440 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 499

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL
Sbjct: 500 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 559

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG
Sbjct: 560 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 619

Query: 421 EYDA 425
           EYDA
Sbjct: 620 EYDA 622

[Close]

BLAST of Cmc03g0070591 vs. ExPASy Swiss-Prot
Match: Q9ZR40 (Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia OX=4092 GN=U2AF65B PE=2 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 4.5e-188
Identity = 328/378 (86.77%), Postives = 353/378 (93.39%), Query Frame = 0


Query: 47  QIPGATPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 106
           Q+PG  P IPGMFP MFPLA+GQ FGALPVMP+QAMTQQATRHARRVYVGGLP  ANEQS
Sbjct: 196 QVPGTNPPIPGMFPNMFPLASGQ-FGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQS 255

Query: 107 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 166
           VATFFS VM+AIGGNTAGPGDAVVNVYIN+EKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 256 VATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAP 315

Query: 167 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 226
            KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL+PGSAGGLEGPDRIFVGGLPYYFTEAQ
Sbjct: 316 CKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQ 375

Query: 227 VRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 286
           +RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD+SVTDIACAALNGIKMGDKTLTVRR
Sbjct: 376 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRR 435

Query: 287 ANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDI 346
           ANQG  QPKPEQESVLLHAQQQIALQ+LMLQP  ++TKVL LT+V++ +EL +DEDY+DI
Sbjct: 436 ANQGTTQPKPEQESVLLHAQQQIALQRLMLQPATLATKVLSLTEVISADELNDDEDYQDI 495

Query: 347 MEDMRGEGGKFGTLVNVVIPRPRPN-EAAPGVGKVFLEYADIDSATKARAGLNGRKFGGN 406
           +EDMR E GKFG+LVNVVIPRP PN E  PGVGKVFLEYAD+DS++KAR  LNGRKFGGN
Sbjct: 496 LEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGN 555

Query: 407 QVMAVFYPENKFAQGEYD 424
           QV+AVFYPENKF +G+YD
Sbjct: 556 QVVAVFYPENKFYEGDYD 572

[Close]

BLAST of Cmc03g0070591 vs. ExPASy Swiss-Prot
Match: Q9ZR39 (Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia OX=4092 GN=U2AF65A PE=2 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 4.2e-186
Identity = 323/379 (85.22%), Postives = 351/379 (92.61%), Query Frame = 0


Query: 47  QIPGATPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 106
           Q+PG  PAIPG+F  MFPLA+ Q FGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQS
Sbjct: 178 QVPGTNPAIPGLFSNMFPLASSQ-FGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQS 237

Query: 107 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 166
           VATFFS VM AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG+IFEG P
Sbjct: 238 VATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGP 297

Query: 167 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 226
           VKVRRPSDYNPSLAATLGPSQP+PNLNLAAVG TPGS+GGLEGPDRIFVGGLPYYFTE+Q
Sbjct: 298 VKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTESQ 357

Query: 227 VRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 286
           +RELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTDIACAALNGIKMGDKTLTVRR
Sbjct: 358 IRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRR 417

Query: 287 ANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDI 346
           ANQG  QP PEQESVLLHAQQQIALQ+ MLQPGA++TKVLCLT+VVT +EL +D+DY+DI
Sbjct: 418 ANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQDI 477

Query: 347 MEDMRGEGGKFGTLVNVVIPRPRPNEA-APGVGKVFLEYADIDSATKARAGLNGRKFGGN 406
           +EDMR E  KFG LVNVVIPRP PN    PG+GKVFLEYAD+D ++KAR GLNGRKFGGN
Sbjct: 478 LEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGGN 537

Query: 407 QVMAVFYPENKFAQGEYDA 425
           QV+AVFYPENKF++G+Y+A
Sbjct: 538 QVVAVFYPENKFSEGDYEA 555

[Close]

BLAST of Cmc03g0070591 vs. ExPASy Swiss-Prot
Match: O23212 (Splicing factor U2af large subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF65A PE=1 SV=2)

HSP 1 Score: 635.2 bits (1637), Expect = 5.4e-181
Identity = 317/381 (83.20%), Postives = 347/381 (91.08%), Query Frame = 0


Query: 47  QIPGATPAIP--GMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 106
           Q+P A P +P  GMFP MFPL TGQ FG L +MP+QAMTQQATRHARRVYVGGL PTANE
Sbjct: 193 QVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANE 252

Query: 107 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 166
           QSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEG
Sbjct: 253 QSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEG 312

Query: 167 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 226
           APVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE
Sbjct: 313 APVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE 372

Query: 227 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 286
           +QVRELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV
Sbjct: 373 SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 432

Query: 287 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 346
           RRANQG    KPEQE+VLLHAQQQIA Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y 
Sbjct: 433 RRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYG 492

Query: 347 DIMEDMRGEGGKFGTLVNVVIPRPRPN-EAAPGVGKVFLEYADIDSATKARAGLNGRKFG 406
           DIMEDMR EGGKFG L NVVIPRP PN E   G+GKVFL+YAD D +T+AR G+NGRKFG
Sbjct: 493 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 552

Query: 407 GNQVMAVFYPENKFAQGEYDA 425
           GN+V+AV+YPE+KF QG+Y A
Sbjct: 553 GNEVVAVYYPEDKFEQGDYGA 573

[Close]

BLAST of Cmc03g0070591 vs. ExPASy Swiss-Prot
Match: Q8L716 (Splicing factor U2af large subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF65B PE=1 SV=2)

HSP 1 Score: 632.5 bits (1630), Expect = 3.5e-180
Identity = 313/380 (82.37%), Postives = 344/380 (90.53%), Query Frame = 0


Query: 47  QIPG--ATPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 106
           Q+P    T  IPGMF  MFP+  GQ  GALPV+PVQAMTQQATRHARRVYVGGLPPTANE
Sbjct: 209 QVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANE 268

Query: 107 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 166
           QSV+TFFSQVM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII EG
Sbjct: 269 QSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEG 328

Query: 167 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 226
            PVKVRRP+DYNPSLAATLGPSQPNPNLNL AVGL+ GS GGLEGPDRIFVGGLPYYFTE
Sbjct: 329 VPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTE 388

Query: 227 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 286
            Q+RELLESFGPLRGF+LVKDRETGNSKGYAFCVYQD SVTDIACAALNGIKMGDKTLTV
Sbjct: 389 VQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTV 448

Query: 287 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 346
           RRA QGA QPKPEQE VLL+AQQQIALQ+LM QPG   TK++CLTQVVT ++L +DE+Y 
Sbjct: 449 RRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYA 508

Query: 347 DIMEDMRGEGGKFGTLVNVVIPRPRP-NEAAPGVGKVFLEYADIDSATKARAGLNGRKFG 406
           +IMEDMR EGGKFG LVNVVIPRP P ++  PGVGKVFLEYAD+D ++KAR+G+NGRKFG
Sbjct: 509 EIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFG 568

Query: 407 GNQVMAVFYPENKFAQGEYD 424
           GNQV+AV+YPE+K+AQG+Y+
Sbjct: 569 GNQVVAVYYPEDKYAQGDYE 588

[Close]

BLAST of Cmc03g0070591 vs. ExPASy Swiss-Prot
Match: Q2QZL4 (Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF65B PE=3 SV=2)

HSP 1 Score: 615.1 bits (1585), Expect = 5.7e-175
Identity = 311/380 (81.84%), Postives = 340/380 (89.47%), Query Frame = 0


Query: 46  SQIPGATPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 105
           SQ PG   AIPGMFP M P+  GQ F  L + P QAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 173 SQFPGT--AIPGMFPNMLPMGVGQ-FNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQ 232

Query: 106 SVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 165
           SVA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGA
Sbjct: 233 SVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGA 292

Query: 166 PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 225
           PVKVRRP+DYNPSLAA LGPSQP+PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA
Sbjct: 293 PVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 352

Query: 226 QVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 285
           QVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVR
Sbjct: 353 QVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVR 412

Query: 286 RANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYED 345
           RANQGA QP+PEQES+LL AQQQ+ LQKL+ Q GA+ TKV+CLTQVV+ +EL +DE+YED
Sbjct: 413 RANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVSADELKDDEEYED 472

Query: 346 IMEDMRGEGGKFGTLVNVVIPRPRPNE-AAPGVGKVFLEYADIDSATKARAGLNGRKFGG 405
           IMEDMR E GK+G L+ VVIPRP P+     GVGKVFLEYAD+D ATKA+  ++GRKFGG
Sbjct: 473 IMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGG 532

Query: 406 NQVMAVFYPENKFAQGEYDA 425
           N V+AVFYPENKF+  EYDA
Sbjct: 533 NPVVAVFYPENKFSSAEYDA 548

[Close]

BLAST of Cmc03g0070591 vs. ExPASy TrEMBL
Match: A0A1S4DVW4 (U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 PE=3 SV=1)

HSP 1 Score: 846.3 bits (2185), Expect = 5.6e-242
Identity = 422/424 (99.53%), Postives = 422/424 (99.53%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFL  QIPGATPAIPGMFP
Sbjct: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLAGQIPGATPAIPGMFP 60

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES
Sbjct: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL
Sbjct: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG
Sbjct: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420

Query: 421 EYDA 425
           EYDA
Sbjct: 421 EYDA 424

[Close]

BLAST of Cmc03g0070591 vs. ExPASy TrEMBL
Match: A0A1S4DVW2 (U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 PE=3 SV=1)

HSP 1 Score: 843.6 bits (2178), Expect = 3.7e-241
Identity = 423/424 (99.76%), Postives = 423/424 (99.76%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLG QIPGATPAIPGMFP
Sbjct: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLG-QIPGATPAIPGMFP 60

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES
Sbjct: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL
Sbjct: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG
Sbjct: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420

Query: 421 EYDA 425
           EYDA
Sbjct: 421 EYDA 423

[Close]

BLAST of Cmc03g0070591 vs. ExPASy TrEMBL
Match: A0A5A7TWD0 (U2 snRNP auxiliary factor large subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold83G00920 PE=3 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 1.3e-238
Identity = 419/424 (98.82%), Postives = 419/424 (98.82%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFL  QIPGATPAIPGMFP
Sbjct: 152 MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLAGQIPGATPAIPGMFP 211

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 212 TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 271

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 272 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 331

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 332 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 391

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES
Sbjct: 392 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 451

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL
Sbjct: 452 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 511

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPG   VFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG
Sbjct: 512 VNVVIPRPRPNEAAPG---VFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 571

Query: 421 EYDA 425
           EYDA
Sbjct: 572 EYDA 572

[Close]

BLAST of Cmc03g0070591 vs. ExPASy TrEMBL
Match: A0A6J1EP81 (U2 snRNP auxiliary factor large subunit OS=Cucurbita moschata OX=3662 GN=LOC111436322 PE=3 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 2.2e-225
Identity = 398/424 (93.87%), Postives = 404/424 (95.28%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCAD+GRELTSVAFMCKKDQCT+                 QIPG TPAIPGMFP
Sbjct: 1   MLDYLPLCADHGRELTSVAFMCKKDQCTA----------------GQIPGTTPAIPGMFP 60

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQP+PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 181 ATLGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQES
Sbjct: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQES 300

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG L
Sbjct: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGAL 360

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADI+SATKAR+GLNGRKFGGNQV+AVFYPENKFAQG
Sbjct: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIESATKARSGLNGRKFGGNQVIAVFYPENKFAQG 408

Query: 421 EYDA 425
           EYDA
Sbjct: 421 EYDA 408

[Close]

BLAST of Cmc03g0070591 vs. ExPASy TrEMBL
Match: A0A6J1ENR9 (U2 snRNP auxiliary factor large subunit OS=Cucurbita moschata OX=3662 GN=LOC111436322 PE=3 SV=1)

HSP 1 Score: 790.4 bits (2040), Expect = 3.7e-225
Identity = 398/424 (93.87%), Postives = 403/424 (95.05%), Query Frame = 0


Query: 1   MLDYLPLCADNGRELTSVAFMCKKDQCTSQMDLVRLHLETYSFLGSQIPGATPAIPGMFP 60
           MLDYLPLCAD+GRELTSVAFMCKKDQCT                  QIPG TPAIPGMFP
Sbjct: 1   MLDYLPLCADHGRELTSVAFMCKKDQCT-----------------GQIPGTTPAIPGMFP 60

Query: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120
           TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 61  TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 120

Query: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 121 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 180

Query: 181 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240
           ATLGPSQP+PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF
Sbjct: 181 ATLGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 240

Query: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 300
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQES
Sbjct: 241 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQES 300

Query: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTL 360
           VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG L
Sbjct: 301 VLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGAL 360

Query: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQG 420
           VNVVIPRPRPNEAAPGVGKVFLEYADI+SATKAR+GLNGRKFGGNQV+AVFYPENKFAQG
Sbjct: 361 VNVVIPRPRPNEAAPGVGKVFLEYADIESATKARSGLNGRKFGGNQVIAVFYPENKFAQG 407

Query: 421 EYDA 425
           EYDA
Sbjct: 421 EYDA 407

[Close]

BLAST of Cmc03g0070591 vs. TAIR 10
Match: AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 635.2 bits (1637), Expect = 3.8e-182
Identity = 317/381 (83.20%), Postives = 347/381 (91.08%), Query Frame = 0


Query: 47  QIPGATPAIP--GMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 106
           Q+P A P +P  GMFP MFPL TGQ FG L +MP+QAMTQQATRHARRVYVGGL PTANE
Sbjct: 193 QVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANE 252

Query: 107 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 166
           QSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEG
Sbjct: 253 QSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEG 312

Query: 167 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 226
           APVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE
Sbjct: 313 APVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE 372

Query: 227 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 286
           +QVRELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV
Sbjct: 373 SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 432

Query: 287 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 346
           RRANQG    KPEQE+VLLHAQQQIA Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y 
Sbjct: 433 RRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYG 492

Query: 347 DIMEDMRGEGGKFGTLVNVVIPRPRPN-EAAPGVGKVFLEYADIDSATKARAGLNGRKFG 406
           DIMEDMR EGGKFG L NVVIPRP PN E   G+GKVFL+YAD D +T+AR G+NGRKFG
Sbjct: 493 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 552

Query: 407 GNQVMAVFYPENKFAQGEYDA 425
           GN+V+AV+YPE+KF QG+Y A
Sbjct: 553 GNEVVAVYYPEDKFEQGDYGA 573

[Close]

BLAST of Cmc03g0070591 vs. TAIR 10
Match: AT4G36690.4 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 635.2 bits (1637), Expect = 3.8e-182
Identity = 317/381 (83.20%), Postives = 347/381 (91.08%), Query Frame = 0


Query: 47  QIPGATPAIP--GMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 106
           Q+P A P +P  GMFP MFPL TGQ FG L +MP+QAMTQQATRHARRVYVGGL PTANE
Sbjct: 171 QVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANE 230

Query: 107 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 166
           QSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEG
Sbjct: 231 QSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEG 290

Query: 167 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 226
           APVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE
Sbjct: 291 APVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE 350

Query: 227 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 286
           +QVRELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV
Sbjct: 351 SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 410

Query: 287 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 346
           RRANQG    KPEQE+VLLHAQQQIA Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y 
Sbjct: 411 RRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYG 470

Query: 347 DIMEDMRGEGGKFGTLVNVVIPRPRPN-EAAPGVGKVFLEYADIDSATKARAGLNGRKFG 406
           DIMEDMR EGGKFG L NVVIPRP PN E   G+GKVFL+YAD D +T+AR G+NGRKFG
Sbjct: 471 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 530

Query: 407 GNQVMAVFYPENKFAQGEYDA 425
           GN+V+AV+YPE+KF QG+Y A
Sbjct: 531 GNEVVAVYYPEDKFEQGDYGA 551

[Close]

BLAST of Cmc03g0070591 vs. TAIR 10
Match: AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 632.5 bits (1630), Expect = 2.5e-181
Identity = 313/380 (82.37%), Postives = 344/380 (90.53%), Query Frame = 0


Query: 47  QIPG--ATPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 106
           Q+P    T  IPGMF  MFP+  GQ  GALPV+PVQAMTQQATRHARRVYVGGLPPTANE
Sbjct: 209 QVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANE 268

Query: 107 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 166
           QSV+TFFSQVM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII EG
Sbjct: 269 QSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEG 328

Query: 167 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 226
            PVKVRRP+DYNPSLAATLGPSQPNPNLNL AVGL+ GS GGLEGPDRIFVGGLPYYFTE
Sbjct: 329 VPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTE 388

Query: 227 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 286
            Q+RELLESFGPLRGF+LVKDRETGNSKGYAFCVYQD SVTDIACAALNGIKMGDKTLTV
Sbjct: 389 VQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTV 448

Query: 287 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 346
           RRA QGA QPKPEQE VLL+AQQQIALQ+LM QPG   TK++CLTQVVT ++L +DE+Y 
Sbjct: 449 RRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYA 508

Query: 347 DIMEDMRGEGGKFGTLVNVVIPRPRP-NEAAPGVGKVFLEYADIDSATKARAGLNGRKFG 406
           +IMEDMR EGGKFG LVNVVIPRP P ++  PGVGKVFLEYAD+D ++KAR+G+NGRKFG
Sbjct: 509 EIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFG 568

Query: 407 GNQVMAVFYPENKFAQGEYD 424
           GNQV+AV+YPE+K+AQG+Y+
Sbjct: 569 GNQVVAVYYPEDKYAQGDYE 588

[Close]

BLAST of Cmc03g0070591 vs. TAIR 10
Match: AT4G36690.2 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 541.2 bits (1393), Expect = 7.5e-154
Identity = 272/314 (86.62%), Postives = 292/314 (92.99%), Query Frame = 0


Query: 47  QIPGATPAIP--GMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 106
           Q+P A P +P  GMFP MFPL TGQ FG L +MP+QAMTQQATRHARRVYVGGL PTANE
Sbjct: 193 QVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANE 252

Query: 107 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 166
           QSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEG
Sbjct: 253 QSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEG 312

Query: 167 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 226
           APVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE
Sbjct: 313 APVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE 372

Query: 227 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 286
           +QVRELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV
Sbjct: 373 SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 432

Query: 287 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 346
           RRANQG    KPEQE+VLLHAQQQIA Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y 
Sbjct: 433 RRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYG 492

Query: 347 DIMEDMRGEGGKFG 359
           DIMEDMR EGGKFG
Sbjct: 493 DIMEDMRQEGGKFG 506

[Close]

BLAST of Cmc03g0070591 vs. TAIR 10
Match: AT4G36690.3 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 538.9 bits (1387), Expect = 3.7e-153
Identity = 271/313 (86.58%), Postives = 291/313 (92.97%), Query Frame = 0


Query: 47  QIPGATPAIP--GMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 106
           Q+P A P +P  GMFP MFPL TGQ FG L +MP+QAMTQQATRHARRVYVGGL PTANE
Sbjct: 193 QVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANE 252

Query: 107 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 166
           QSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEG
Sbjct: 253 QSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEG 312

Query: 167 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 226
           APVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE
Sbjct: 313 APVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE 372

Query: 227 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 286
           +QVRELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV
Sbjct: 373 SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 432

Query: 287 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 346
           RRANQG    KPEQE+VLLHAQQQIA Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y 
Sbjct: 433 RRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYG 492

Query: 347 DIMEDMRGEGGKF 358
           DIMEDMR EGGKF
Sbjct: 493 DIMEDMRQEGGKF 505

The following BLAST results are available for this feature:

BLAST of Cmc03g0070591 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900124.1	1.2e-241	99.53	PREDICTED: splicing factor U2af large subunit B-like isoform X5 [Cucumis melo] >...	[more]
XP_016900126.1	7.6e-241	99.76	PREDICTED: splicing factor U2af large subunit B-like isoform X6 [Cucumis melo]	[more]
XP_011656485.1	9.9e-241	99.06	splicing factor U2af large subunit A isoform X1 [Cucumis sativus]	[more]
XP_011656495.1	9.9e-241	99.06	splicing factor U2af large subunit B isoform X8 [Cucumis sativus] >XP_031742967....	[more]
XP_011656487.1	6.4e-240	99.29	splicing factor U2af large subunit A isoform X3 [Cucumis sativus]	[more]

BLAST of Cmc03g0070591 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR40	4.5e-188	86.77	Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia OX=4092 GN=U2A...	[more]
Q9ZR39	4.2e-186	85.22	Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia OX=4092 GN=U2A...	[more]
O23212	5.4e-181	83.20	Splicing factor U2af large subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF65A ...	[more]
Q8L716	3.5e-180	82.37	Splicing factor U2af large subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF65B ...	[more]
Q2QZL4	5.7e-175	81.84	Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Cmc03g0070591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DVW4	5.6e-242	99.53	U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 ...	[more]
A0A1S4DVW2	3.7e-241	99.76	U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 ...	[more]
A0A5A7TWD0	1.3e-238	98.82	U2 snRNP auxiliary factor large subunit OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1EP81	2.2e-225	93.87	U2 snRNP auxiliary factor large subunit OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1ENR9	3.7e-225	93.87	U2 snRNP auxiliary factor large subunit OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Cmc03g0070591 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36690.1	3.8e-182	83.20	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.4	3.8e-182	83.20	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT1G60900.1	2.5e-181	82.37	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.2	7.5e-154	86.62	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.3	3.7e-153	86.58	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 212..285 e-value: 9.2E-21 score: 85.0 coord: 92..170 e-value: 6.0E-13 score: 59.0 coord: 325..411 e-value: 0.056 score: 17.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 213..282 e-value: 4.2E-17 score: 61.7 coord: 355..407 e-value: 3.4E-5 score: 23.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 211..289 score: 15.51092
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 91..174 score: 12.696778
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 324..415 score: 9.012812
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 86..185 e-value: 1.3E-31 score: 111.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 186..301 e-value: 1.1E-21 score: 79.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 320..423 e-value: 3.5E-31 score: 109.2
IPR006529	U2 snRNP auxilliary factor, large subunit, splicing factor	TIGRFAM	TIGR01642	TIGR01642	coord: 24..422 e-value: 6.5E-163 score: 540.8
None	No IPR available	PANTHER	PTHR23139	RNA-BINDING PROTEIN	coord: 45..423
None	No IPR available	PANTHER	PTHR23139:SF121	U2 SNRNP AUXILIARY FACTOR LARGE SUBUNIT	coord: 45..423
None	No IPR available	CDD	cd12231	RRM2_U2AF65	coord: 211..287 e-value: 3.6971E-45 score: 149.303
None	No IPR available	CDD	cd12232	RRM3_U2AF65	coord: 323..410 e-value: 5.01145E-39 score: 133.45
None	No IPR available	CDD	cd12230	RRM1_U2AF65	coord: 90..172 e-value: 1.23118E-41 score: 139.983
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 212..414
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 91..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0070591.1	Cmc03g0070591.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding