Cmc03g0070331 (gene) Melon (Charmono) v1.1

Overview
NameCmc03g0070331
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionZ512B protein
LocationCMiso1.1chr03: 16078738 .. 16081531 (+)
RNA-Seq ExpressionCmc03g0070331
SyntenyCmc03g0070331
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATCCCAACCGTGTTTACTTTCCATTTGACCCTTCTATCTTTCGTGAGTCACGTATTCATGATATGATAGTACAGGCACTCGTTTGCCATTATTTTTCTCAACTCCAGAAGCTAGGAAACTTCATGAGGAGGAAATCCGAAATCGTTGTCCCTCGGCGGTGTTGGACGGATATTTGATCTAGACTTTGCAGATTGCTAACGCTTACCAATGGTTAGGACACTTCCTCAGACAATCGACCTGTTGGGATGGGACTTGGGGCTGCATATGATTATCAGAACTCTTTCATTCCAATAACTATGACTTGTTTTCGTTCATGCGACTCGCATTGGGTTGAAATTTCTGTCATGGGATAATGACATTGCCGTTTCTGAACTGCAGAAGAATGCTGCTTCCAAACAAATGAAAGTAAGACACAAGAAATGGCTATTTGACCTTTCCAATTGGATTTACACGGGGTTTTGGACTGAGGAGAAAATGTATGGATCGGTTAAAGGAATGGCAGAAGCTCCCTTACACTTCTCCACATTGTGATGACTCTCATCTGGATCCCCGTACAAATGTATCTGAAAAGAGGATTGTTGGAGTATTTCATGACCTACTTCACCCTAAATTGCAAAAGAGAACAAAAAAATGTAAGCAACCTCCGAAAACGATTCTCTAAGAAGCATAACACGTAGACTGTAATCCTTCGAGAATCATATGATGGGGAAAAGCTTGTGCAGAAATAGTATCAGGGAAAGATTTACAAGCACATGTTGAGGAAACGCCAAAGTATAGAAGCAGAGGTTTTCACAAGAAAATATCCATCTGATCACCTTCATCATGATGAAGTGGATGCAACTCGATATAGTTCCGAAGAAGTGTCCGATCATAACTTGCTTTCAGAATATGATTGGGAACCAGATGGTCTGATTGACAAAAACTGCTAAAGAAGTTGCCATAATTCTACAGCCGCTTCAGCATTCAAAAATTGGATGAACAGATTAGCCAAATATAGGGAGAGCCAACCTCTAAGTCTGTAAGCAACCTGTCCATCAACATGGTTTTTGTTTATCTTATAAAACAGTGGAGTTGTGAGTATTCTATGAAATTGCTTAGCCCTCCTGCTTTTAGTGTTTTAGTTTTTTCAATTTGAGTTTTTTTGTTTTCTCCGATTTCTTTTTACCATGGTTTTCATTATTATTATTTTGTTTTTAAAGAAATATTTGAATCTATAGCCAGAACTCTAATAGCAAAAACAACTAAACATCTTTTGGTAAAAAAACACTAAGTAGTCAACAAACCAAAGGAACCCATAGTTATAAAAAAGAACAATAGTTATTTCCGTTTCTTGAATATAATTTATATTTGGCTTCAATTTTGCAGCTATATGTTATTAGTTATCATACCGAGAATACGATATGAGCTAAATTAAATCTCTTGAACTTTAAAATTCGTTTCCCTTTATAACTCCAAAGTGTACCGTCCGTACACTTTTTTTAGCAATCTAAATTGTGGAGATTTGGTGGCATTAAAGACCGACTGGTTAAGAATTTAAGTTCACTTGAAAACTTTTAAAACTATAACATCCAGAATTGAAACTTGATTTTCCATGTTGGCAGAGGTATTCATCAATATAGTTGATCAAGCTTGTACGACTTGGCTGTTTTAGATGATACAAACAACTGAGACAGACATTACAAGATAATCAAGTGAATCAACACCAAAGGAATGTATTAGAATTTTATTCTATGGTGGCATGAACAAAAGGTAGAATTGTACATATATTACGTTGACGACAATAAAAATCGAGATATGTCCTCATTTATCGATGTTCAGTTGTATACAAATTGTGATAAGAATATGAAAATTATCAATCGACCAGCTCACCTGTAGAACTCTCGGTATGTCACTGGAAATGTAAAAAAGCATACAAAGAATAAGCAAAATGAACATCGCAACGAACAGCTTTCATAGAAAAGAATGAACTGCAGCTATTGCTCTTCACAAAATCTGAAATGTGAAGGACTTCCAAAGGCAACAATAAGTTGGCCATCCCAATCTTCAACTCTCAAGTAAATCTGGTACTGCACTCTAAAATGTGTATCTTGAATTTGGTTTATTGGTAGCCACCACCATATGATTGCTGGGGGGCATAACCACCCATCATTGGATTATAACTACCCGAGGCATTGGATCCTGGCCGAAACACACCCGGTGGTTGAAATTGCATTGCTTGTCCCATACCCATATTTCCCGGGTTCATTCCCATGCTTGGGTTCATTCCCATGCTTGGGTTCATTCCCATGCCCGGGTTCATCCCCATGCCCGGGTTCATCCCCATGCCCGGGTTCATCCCCATTCCCATTCCCATTCCTGGGTTCATGCCAGCATTGTTCATGCCCATGCCCATTCCCATTCCCATGGATTGATTGATTCCTCCATAGAACCCTCCCATGCCAGCGTGGTTCATACCCATACCAGACCCCATCATAGGGTTTGGTGGCCCTCTAAGGGCACTCGCACCAGCACGACCTACCCCAGAACCAGATCCCATAGCTTTACCCATGGTGATAGTAGAAATTACTGCAGTTGTAGTAGGCTTTTCCATCCTCTTTTCCTTTCTGTTTATGGCATCAAAATCCACTCCAATGTCAGCCAATGGATTTGTTTTAGCTGCACATTAAGGAACATATTTAGTCAACTATCAGAGAACACATATGATGCAAATATACATATGCAAGAATTCAAGGTTGCGTGAACTCACGTCCAGATATATTCAAATCAACTAGCCCTCTGTTAAGAGTGTCAGC

mRNA sequence

TTATCCCAACCGTGTTTACTTTCCATTTGACCCTTCTATCTTTCGTGAGTCACGTATTCATGATATGATAGTACAGGCACTCGTTTGCCATTATTTTTCTCAACTCCAGAAGCTAGGAAACTTCATGAGGAGGAAATCCGAAATCGTTGTCCCTCGGCGGTGTTGGACGGATATTTGATCTAGACTTTGCAGATTGCTAACGCTTACCAATGGTTAGGACACTTCCTCAGACAATCGACCTGTTGGGATGGGACTTGGGGCTGCATATGATTATCAGAACTCTTTCATTCCAATAACTATGACTTGTTTTCGTTCATGCGACTCGCATTGGGTTGAAATTTCTGTCATGGGATAATGACATTGCCGTTTCTGAACTGCAGAAGAATGCTGCTTCCAAACAAATGAAAGTAAGACACAAGAAATGGCTATTTGACCTTTCCAATTGGATTTACACGGGGTTTTGGACTGAGGAGAAAATGTATGGATCGGTTAAAGGAATGGCAGAAGCTCCCTTACACTTCTCCACATTGTGATGACTCTCATCTGGATCCCCGTACAAATGTATCTGAAAAGAGGATTGTTGGAGTATTTCATGACCTACTTCACCCTAAATTGCAAAAGAGAACAAAAAAATGTAAGCAACCTCCGAAAACGATTCTCTAAGAAGCATAACACGTAGACTGTAATCCTTCGAGAATCATATGATGGGGAAAAGCTTGTGCAGAAATAGTATCAGGGAAAGATTTACAAGCACATGTTGAGGAAACGCCAAAGTATAGAAGCAGAGGTTTTCACAAGAAAATATCCATCTGATCACCTTCATCATGATGAAGTGGATGCAACTCGATATAGTTCCGAAGAAGTGTCCGATCATAACTTGCTTTCAGAATATGATTGGGAACCAGATGGTCTGATTGACAAAAACTGCTAAAGAAGTTGCCATAATTCTACAGCCGCTTCAGCATTCAAAAATTGGATGAACAGATTAGCCAAATATAGGGAGAGCCAACCTCTAAGTCTGTAAGCAACCTGTCCATCAACATGGTTTTTGTTTATCTTATAAAACAGTGGAGTTGTATTCATCAATATAGTTGATCAAGCTTGTACGACTTGGCTGTTTTAGATGATACAAACAACTGAGACAGACATTACAAGATAATCAAGTGAATCAACACCAAAGGAATGTATTAGAATTTTATTCTATGGTGGCATGAACAAAAGGTAGAATTGTACATATATTACGTTGACGACAATAAAAATCGAGATATGTCCTCATTTATCGATGTTCAGTTGTATACAAATTGTGATAAGAATATGAAAATTATCAATCGACCAGCTCACCTGTAGAACTCTCGGTATGTCACTGGAAATGTAAAAAAGCATACAAAGAATAAGCAAAATGAACATCGCAACGAACAGCTTTCATAGAAAAGAATGAACTGCAGCTATTGCTCTTCACAAAATCTGAAATGTGAAGGACTTCCAAAGGCAACAATAAGTTGGCCATCCCAATCTTCAACTCTCAAGTAAATCTGGTACTGCACTCTAAAATGTGTATCTTGAATTTGGTTTATTGGTAGCCACCACCATATGATTGCTGGGGGGCATAACCACCCATCATTGGATTATAACTACCCGAGGCATTGGATCCTGGCCGAAACACACCCGGTGGTTGAAATTGCATTGCTTGTCCCATACCCATATTTCCCGGGTTCATTCCCATGCTTGGGTTCATTCCCATGCTTGGGTTCATTCCCATGCCCGGGTTCATCCCCATGCCCGGGTTCATCCCCATGCCCGGGTTCATCCCCATTCCCATTCCCATTCCTGGGTTCATGCCAGCATTGTTCATGCCCATGCCCATTCCCATTCCCATGGATTGATTGATTCCTCCATAGAACCCTCCCATGCCAGCGTGGTTCATACCCATACCAGACCCCATCATAGGGTTTGGTGGCCCTCTAAGGGCACTCGCACCAGCACGACCTACCCCAGAACCAGATCCCATAGCTTTACCCATGGTGATAGTAGAAATTACTGCAGTTGTAGTAGGCTTTTCCATCCTCTTTTCCTTTCTGTTTATGGCATCAAAATCCACTCCAATGTCAGCCAATGGATTTGTTTTAGCTGCACATTAAGGAACATATTTAGTCAACTATCAGAGAACACATATGATGCAAATATACATATGCAAGAATTCAAGGTTGCGTGAACTCACGTCCAGATATATTCAAATCAACTAGCCCTCTGTTAAGAGTGTCAGC

Coding sequence (CDS)

ATGATTGCTGGGGGGCATAACCACCCATCATTGGATTATAACTACCCGAGGCATTGGATCCTGGCCGAAACACACCCGGTGGTTGAAATTGCATTGCTTGTCCCATACCCATATTTCCCGGGTTCATTCCCATGCTTGGGTTCATTCCCATGCTTGGGTTCATTCCCATGCCCGGGTTCATCCCCATGCCCGGGTTCATCCCCATGCCCGGGTTCATCCCCATTCCCATTCCCATTCCTGGGTTCATGCCAGCATTGTTCATGCCCATGCCCATTCCCATTCCCATGGATTGATTGA

Protein sequence

MIAGGHNHPSLDYNYPRHWILAETHPVVEIALLVPYPYFPGSFPCLGSFPCLGSFPCPGSSPCPGSSPCPGSSPFPFPFLGSCQHCSCPCPFPFPWID
Homology
[Close]
BLAST of Cmc03g0070331 vs. NCBI nr
Match: NXC53008.1 (Z512B protein [Aleadryas rufinucha])

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-04
Identity = 31/59 (52.54%), Postives = 31/59 (52.54%), Query Frame = 0 

Query: 40 PGSFPCLGSFPCLGSFPCPGSSPCPGSSPCPGSSPFPFPFLGSCQH---CSCPCPFPFP 96
          P S PCL S PC  S PCP S PCPGS PCP S P P        H    SCPCP   P
Sbjct: 3  PASHPCLASHPCPASHPCPASHPCPGSHPCPASHPCPASHPCPRSHPCPASCPCPGSHP 61

[Close]
BLAST of Cmc03g0070331 vs. ExPASy TrEMBL
Match: A0A7K8HD18 (Z512B protein (Fragment) OS=Aleadryas rufinucha OX=461220 GN=Znf512b_0 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.8e-05
Identity = 31/59 (52.54%), Postives = 31/59 (52.54%), Query Frame = 0 

Query: 40 PGSFPCLGSFPCLGSFPCPGSSPCPGSSPCPGSSPFPFPFLGSCQH---CSCPCPFPFP 96
          P S PCL S PC  S PCP S PCPGS PCP S P P        H    SCPCP   P
Sbjct: 3  PASHPCLASHPCPASHPCPASHPCPGSHPCPASHPCPASHPCPRSHPCPASCPCPGSHP 61

[Close]
BLAST of Cmc03g0070331 vs. ExPASy TrEMBL
Match: A0A674HQX0 (Uncharacterized protein OS=Taeniopygia guttata OX=59729 GN=ZBTB8B PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-04
Identity = 31/60 (51.67%), Postives = 31/60 (51.67%), Query Frame = 0 

Query: 40  PGSFPCLGSFPCLGSFPCPGSS----PCPGSSPCPGSSPFPFPFLGSCQHCSCPCPFPFP 96
           PG  PC G  PC G  PCPG      PCPG  PCPG  P PFPF         P PFPFP
Sbjct: 92  PGPCPCPGPIPCPGPCPCPGPGPCPCPCPGPIPCPGPGPVPFPF---------PFPFPFP 142

[Close]
BLAST of Cmc03g0070331 vs. ExPASy TrEMBL
Match: A0A7L2DSJ8 (MUC1 protein (Fragment) OS=Anthoscopus minutus OX=156561 GN=Muc1_1 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.4e-04
Identity = 31/56 (55.36%), Postives = 32/56 (57.14%), Query Frame = 0 

Query: 40  PGSFPCLGSFPCLGSFPCPGSSPCPGSSPCPGSSP----FPFPFLGSCQHCSCPCP 92
           PG  PC G  PC G  PCPG SPCPG SPCPG SP     P P +  C   S PCP
Sbjct: 143 PGVSPCPGVSPCPGVSPCPGVSPCPGVSPCPGVSPCPGVSPCPGVSPCPGVS-PCP 197

[Close]
BLAST of Cmc03g0070331 vs. ExPASy TrEMBL
Match: A0A7K4ZHT1 (RYR3 protein (Fragment) OS=Centropus unirufus OX=1118519 GN=Ryr3_1 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.7e-04
Identity = 32/64 (50.00%), Postives = 32/64 (50.00%), Query Frame = 0 

Query: 39  FPGSFPCLGSFPCLGSFPCPGSSPCPGSSPCPGSSPFPFPFLGSCQ-------HCSCPCP 96
           FP  FPC   FPC   FPCP   PCP   PCP   PFP P    C         C CPCP
Sbjct: 122 FPCPFPC--PFPC--PFPCPCPCPCPCPCPCPFPCPFPCPCPCPCPCPCPCPCPCPCPCP 181

The following BLAST results are available for this feature:
BLAST of Cmc03g0070331 vs. NCBI nr
Match NameE-valueIdentityDescription
NXC53008.11.8e-0452.54Z512B protein [Aleadryas rufinucha][more]
BLAST of Cmc03g0070331 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc03g0070331 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7K8HD188.8e-0552.54Z512B protein (Fragment) OS=Aleadryas rufinucha OX=461220 GN=Znf512b_0 PE=4 SV=1[more]
A0A674HQX01.5e-0451.67Uncharacterized protein OS=Taeniopygia guttata OX=59729 GN=ZBTB8B PE=4 SV=1[more]
A0A7L2DSJ87.4e-0455.36MUC1 protein (Fragment) OS=Anthoscopus minutus OX=156561 GN=Muc1_1 PE=4 SV=1[more]
A0A7K4ZHT19.7e-0450.00RYR3 protein (Fragment) OS=Centropus unirufus OX=1118519 GN=Ryr3_1 PE=4 SV=1[more]
BLAST of Cmc03g0070331 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc03g0070331.1Cmc03g0070331.1mRNA