Cmc03g0069941 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0069941
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr03: 15524282 .. 15525175 (-)
RNA-Seq Expression	Cmc03g0069941
Synteny	Cmc03g0069941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATTTGAGAAATGCACAATATGTTCTTGGTATCCAAATAGTTTGGAACCGAAAGAACAAAAATCTAGCCATGTCTCAAACATCGTATATAAGCAAAATGTTGTCAAGATATAAGATACAAAATTCCAAAGAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACAACTCAAGAAGTTGAGGATATGAATAACATTCCCTATGCTTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAATCCAATCCTGGACGTGATCATTGGACAACCATTAAGAATATTCTAAGATATCTTAAAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTAATCCTTACTGGATACATTGACTCCGATTTTCAAACTGATAGAGATGCTAGAAAGTCTACATCAAGAACAGTTTTCACTCTGAATGGAGGAGCAGTAGTATGGAGAAGCATAAAACAATTATGTATTACCGACTCCACTATGGAAGCTGAATATGTAGCTGCCTGTGAAGAAGCGAAAGAAGTAGTATGGCTTAAAAAGTTCTTAAAAGGTTTGGAAGTTGTTCCAAATATGCATCTGCCAATCACCTTATACTGTGACAACAGTGGTGCAGTTGCAAATTCACGAGAACCAAGAAGTCATAAACGAGGAAAGCACATTGAACGAAAGTACCATCTTATTAGGGAAATCGTACATCGAGGAAACGTTACAGTAACAAAAATCTGCTCCGAGCAAAACATGGCAGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGTCACCTACATGGTTTAGGTCTACAGGGTTTGTAA

mRNA sequence

ATGAAAGATTTGAGAAATGCACAATATGTTCTTGGTATCCAAATAGTTTGGAACCGAAAGAACAAAAATCTAGCCATGTCTCAAACATCGTATATAAGCAAAATGTTGTCAAGATATAAGATACAAAATTCCAAAGAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACAACTCAAGAAGTTGAGGATATGAATAACATTCCCTATGCTTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAATCCAATCCTGGACGTGATCATTGGACAACCATTAAGAATATTCTAAGATATCTTAAAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTAATCCTTACTGGATACATTGACTCCGATTTTCAAACTGATAGAGATGCTAGAAAGTCTACATCAAGAACAGTTTTCACTCTGAATGGAGGAGCAGTAGTATGGAGAAGCATAAAACAATTATGTATTACCGACTCCACTATGGAAGCTGAATATGTAGCTGCCTGTGAAGAAGCGAAAGAAGTAGTATGGCTTAAAAAGTTCTTAAAAGGTTTGGAAGTTGTTCCAAATATGCATCTGCCAATCACCTTATACTGTGACAACAGTGGTGCAGTTGCAAATTCACGAGAACCAAGAAGTCATAAACGAGGAAAGCACATTGAACGAAAGTACCATCTTATTAGGGAAATCGTACATCGAGGAAACGTTACAGTAACAAAAATCTGCTCCGAGCAAAACATGGCAGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGTCACCTACATGGTTTAGGTCTACAGGGTTTGTAA

Coding sequence (CDS)

ATGAAAGATTTGAGAAATGCACAATATGTTCTTGGTATCCAAATAGTTTGGAACCGAAAGAACAAAAATCTAGCCATGTCTCAAACATCGTATATAAGCAAAATGTTGTCAAGATATAAGATACAAAATTCCAAAGAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACAACTCAAGAAGTTGAGGATATGAATAACATTCCCTATGCTTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAATCCAATCCTGGACGTGATCATTGGACAACCATTAAGAATATTCTAAGATATCTTAAAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTAATCCTTACTGGATACATTGACTCCGATTTTCAAACTGATAGAGATGCTAGAAAGTCTACATCAAGAACAGTTTTCACTCTGAATGGAGGAGCAGTAGTATGGAGAAGCATAAAACAATTATGTATTACCGACTCCACTATGGAAGCTGAATATGTAGCTGCCTGTGAAGAAGCGAAAGAAGTAGTATGGCTTAAAAAGTTCTTAAAAGGTTTGGAAGTTGTTCCAAATATGCATCTGCCAATCACCTTATACTGTGACAACAGTGGTGCAGTTGCAAATTCACGAGAACCAAGAAGTCATAAACGAGGAAAGCACATTGAACGAAAGTACCATCTTATTAGGGAAATCGTACATCGAGGAAACGTTACAGTAACAAAAATCTGCTCCGAGCAAAACATGGCAGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGTCACCTACATGGTTTAGGTCTACAGGGTTTGTAA

Protein sequence

MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL

Homology

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BLAST of Cmc03g0069941 vs. NCBI nr
Match: KAA0067716.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 254/296 (85.81%), Postives = 273/296 (92.23%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MKDL NAQYVLGIQIV N KNK LAMSQTSYI KMLSR+K+QNSK+GLLPYRYGIHLSKE
Sbjct: 368 MKDLGNAQYVLGIQIVRNCKNKTLAMSQTSYIDKMLSRHKMQNSKKGLLPYRYGIHLSKE 427

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT+Q+V+DM+NIPYASA+GSLMYAMLCTRP+ICYSVGIVSRYQSNPGRDHWT +KNI
Sbjct: 428 QCPKTSQDVKDMSNIPYASALGSLMYAMLCTRPEICYSVGIVSRYQSNPGRDHWTAVKNI 487

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           L+YL+RTK+YMLVYGSKDLILTGYID DFQTD+DARKSTS +VFTLNGGAVVWRSIKQ C
Sbjct: 488 LKYLRRTKEYMLVYGSKDLILTGYIDYDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSC 547

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           ITDSTME EYVAA E  KE VWLKKFL  LEVVPNMH+PITLYCDNSG VANSREPRSHK
Sbjct: 548 ITDSTMEDEYVAAYEATKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGVVANSREPRSHK 607

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQG 297
           RGKHIERKYHLIREIVHRG+VTVTK+ SEQNMA PFTKALT KVF SHL GL L+G
Sbjct: 608 RGKHIERKYHLIREIVHRGDVTVTKVYSEQNMAGPFTKALTVKVFGSHLPGLALRG 663

[Close]

BLAST of Cmc03g0069941 vs. NCBI nr
Match: KAA0052272.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 513.8 bits (1322), Expect = 9.6e-142
Identity = 248/292 (84.93%), Postives = 268/292 (91.78%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MKDL NAQYVLGI+IV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKE
Sbjct: 331 MKDLENAQYVLGIEIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKSLLPYRYGIHLSKE 390

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT QEV+DM+NIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPG DHWT +KNI
Sbjct: 391 QCPKTPQEVKDMSNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGSDHWTAVKNI 450

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           L+YL+RTKDYMLVYGSKDLILT Y DSDFQ+D+D RKSTS +VFTLNG AVVW+ IKQ C
Sbjct: 451 LKYLRRTKDYMLVYGSKDLILTRYTDSDFQSDKDVRKSTSESVFTLNGEAVVWKRIKQSC 510

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           I DSTMEAEYVA+CE AKE VWLKKFL  LE+VPN+HLPITLYCDNSGAVANS+EPRSHK
Sbjct: 511 IADSTMEAEYVASCEAAKEAVWLKKFLTDLEIVPNIHLPITLYCDNSGAVANSQEPRSHK 570

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGL 293
           R KHIERKYHLIREI+HRG+VT+TKI SEQN+ DPFTKALTAKVFESHLH L
Sbjct: 571 RRKHIERKYHLIREIIHRGDVTITKISSEQNITDPFTKALTAKVFESHLHCL 622

[Close]

BLAST of Cmc03g0069941 vs. NCBI nr
Match: KAA0058854.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 510.8 bits (1314), Expect = 8.1e-141
Identity = 251/297 (84.51%), Postives = 267/297 (89.90%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MK L NA YVL IQIV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKE
Sbjct: 413 MKYLGNAPYVLDIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKCLLPYRYGIHLSKE 472

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT QEVEDM+NIPYA A+GSLMYAMLC RPDICYSV IVS YQSNPGRDHWT +KNI
Sbjct: 473 QCPKTPQEVEDMSNIPYAFAIGSLMYAMLCIRPDICYSVRIVSTYQSNPGRDHWTVVKNI 532

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           ++YL+RTKDYM VYGSKDLILT Y DSDFQTD+DARKSTS +VF LNGGAVVWRSIKQ C
Sbjct: 533 IKYLRRTKDYMFVYGSKDLILTRYTDSDFQTDKDARKSTSGSVFILNGGAVVWRSIKQSC 592

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           I DSTME +YVAACE AKE VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK
Sbjct: 593 IADSTMEVKYVAACEAAKEAVWLKKFLTDLEVVPNMQLPITLYCDNSGAVANSREPRSHK 652

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL 298
            GKHIERKYHLIR+IVHRG+VTVTKI SE+NMADPF KALTAK+FESHLHGLGL+GL
Sbjct: 653 HGKHIERKYHLIRKIVHRGDVTVTKISSEENMADPFIKALTAKMFESHLHGLGLRGL 709

[Close]

BLAST of Cmc03g0069941 vs. NCBI nr
Match: TYK23767.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 510.8 bits (1314), Expect = 8.1e-141
Identity = 251/297 (84.51%), Postives = 267/297 (89.90%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MK L NA YVL IQIV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKE
Sbjct: 287 MKYLGNAPYVLDIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKCLLPYRYGIHLSKE 346

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT QEVEDM+NIPYA A+GSLMYAMLC RPDICYSV IVS YQSNPGRDHWT +KNI
Sbjct: 347 QCPKTPQEVEDMSNIPYAFAIGSLMYAMLCIRPDICYSVRIVSTYQSNPGRDHWTVVKNI 406

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           ++YL+RTKDYM VYGSKDLILT Y DSDFQTD+DARKSTS +VF LNGGAVVWRSIKQ C
Sbjct: 407 IKYLRRTKDYMFVYGSKDLILTRYTDSDFQTDKDARKSTSGSVFILNGGAVVWRSIKQSC 466

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           I DSTME +YVAACE AKE VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK
Sbjct: 467 IADSTMEVKYVAACEAAKEAVWLKKFLTDLEVVPNMQLPITLYCDNSGAVANSREPRSHK 526

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL 298
            GKHIERKYHLIR+IVHRG+VTVTKI SE+NMADPF KALTAK+FESHLHGLGL+GL
Sbjct: 527 HGKHIERKYHLIRKIVHRGDVTVTKISSEENMADPFIKALTAKMFESHLHGLGLRGL 583

[Close]

BLAST of Cmc03g0069941 vs. NCBI nr
Match: KAA0033024.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK03441.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 510.4 bits (1313), Expect = 1.1e-140
Identity = 251/297 (84.51%), Postives = 268/297 (90.24%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MKDL NAQYVLG QIV NRKNK LAMSQTSYI KMLSRYK+QNSK+GLL YRYGIHLSKE
Sbjct: 67  MKDLGNAQYVLGNQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLLYRYGIHLSKE 126

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT QEVEDM+NIPYAS   SLMYAMLCTR DICYSV IVSRYQSNPGRDHWT +KNI
Sbjct: 127 QCPKTPQEVEDMSNIPYASPAESLMYAMLCTRSDICYSVEIVSRYQSNPGRDHWTVVKNI 186

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           L+YL+RTKDYMLVYGS+DLILTGY +SDFQTD+DARKSTSR+VFTLN GAV WRSIKQ C
Sbjct: 187 LKYLRRTKDYMLVYGSRDLILTGYTNSDFQTDKDARKSTSRSVFTLNEGAVAWRSIKQSC 246

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           ITDS +EA+YV ACE AKE VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK
Sbjct: 247 ITDSIVEAKYVVACEAAKEAVWLKKFLTDLEVVPNMDLPITLYCDNSGAVANSREPRSHK 306

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL 298
           +GKHIE+K+HLIREIVHRG+VT+TKI  EQNMADPFTKALT KVFESHLHGLGL  L
Sbjct: 307 QGKHIEQKHHLIREIVHRGDVTITKISFEQNMADPFTKALTTKVFESHLHGLGLSSL 363

[Close]

BLAST of Cmc03g0069941 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.1e-67
Identity = 130/286 (45.45%), Postives = 186/286 (65.03%), Query Frame = 0


Query: 1    MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
            MKDL  AQ +LG++IV  R ++ L +SQ  YI ++L R+ ++N+K    P    + LSK+
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094

Query: 61   QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
             CP T +E  +M  +PY+SAVGSLMYAM+CTRPDI ++VG+VSR+  NPG++HW  +K I
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154

Query: 121  LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
            LRYL+ T    L +G  D IL GY D+D   D D RKS++  +FT +GGA+ W+S  Q C
Sbjct: 1155 LRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1214

Query: 181  ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
            +  ST EAEY+AA E  KE++WLK+FL+ L +    ++   +YCD+  A+  S+    H 
Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV---VYCDSQSAIDLSKNSMYHA 1274

Query: 241  RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFE 287
            R KHI+ +YH IRE+V   ++ V KI + +N AD  TK +    FE
Sbjct: 1275 RTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFE 1317

[Close]

BLAST of Cmc03g0069941 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 172.2 bits (435), Expect = 9.0e-42
Identity = 106/303 (34.98%), Postives = 159/303 (52.48%), Query Frame = 0


Query: 1    MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLP----YRYGIH 60
            M DL   ++ +GI+I    +   + +SQ++Y+ K+LS++ ++N      P      Y + 
Sbjct: 1114 MTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELL 1173

Query: 61   LSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTT 120
             S E C           N P  S +G LMY MLCTRPD+  +V I+SRY S    + W  
Sbjct: 1174 NSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQN 1233

Query: 121  IKNILRYLKRTKDYMLVYGSKDLI----LTGYIDSDFQTDRDARKSTSRTVFTL-NGGAV 180
            +K +LRYLK T D  L++  K+L     + GY+DSD+      RKST+  +F + +   +
Sbjct: 1234 LKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLI 1293

Query: 181  VWRSIKQLCITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVA 240
             W + +Q  +  S+ EAEY+A  E  +E +WLK  L  + +   +  PI +Y DN G ++
Sbjct: 1294 CWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCIS 1353

Query: 241  NSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHG 295
             +  P  HKR KHI+ KYH  RE V    + +  I +E  +AD FTK L A  F      
Sbjct: 1354 IANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDK 1400

[Close]

BLAST of Cmc03g0069941 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-31
Identity = 92/295 (31.19%), Postives = 136/295 (46.10%), Query Frame = 0


Query: 1    MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
            +K+  +  Y LGI+    R  + L +SQ  Y   +L+R  +  +K    P      L+  
Sbjct: 1160 VKEHEDLHYFLGIEA--KRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1219

Query: 61   QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
               K     E      Y   VGSL Y +  TRPD+ Y+V  +S+Y   P  DHW  +K +
Sbjct: 1220 SGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1279

Query: 121  LRYLKRTKDY-MLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQL 180
            LRYL  T D+ + +     L L  Y D+D+  D D   ST+  +  L    + W S KQ 
Sbjct: 1280 LRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1339

Query: 181  CITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSH 240
             +  S+ EAEY +    + E+ W+   L  L +   +  P  +YCDN GA      P  H
Sbjct: 1340 GVVRSSTEAEYRSVANTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFH 1399

Query: 241  KRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGL 295
             R KHI   YH IR  V  G + V  + +   +AD  TK L+   F++    +G+
Sbjct: 1400 SRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443

[Close]

BLAST of Cmc03g0069941 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-30
Identity = 94/295 (31.86%), Postives = 136/295 (46.10%), Query Frame = 0


Query: 1    MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
            +KD     Y LGI+    R    L +SQ  YI  +L+R  +  +K    P      LS  
Sbjct: 1177 VKDHEELHYFLGIEA--KRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLY 1236

Query: 61   QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
               K T   E      Y   VGSL Y +  TRPDI Y+V  +S++   P  +H   +K I
Sbjct: 1237 SGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRI 1296

Query: 121  LRYLKRTKDY-MLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQL 180
            LRYL  T ++ + +     L L  Y D+D+  D+D   ST+  +  L    + W S KQ 
Sbjct: 1297 LRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1356

Query: 181  CITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSH 240
             +  S+ EAEY +    + E+ W+   L  L +   +  P  +YCDN GA      P  H
Sbjct: 1357 GVVRSSTEAEYRSVANTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGATYLCANPVFH 1416

Query: 241  KRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGL 295
             R KHI   YH IR  V  G + V  + +   +AD  TK L+   F++    +G+
Sbjct: 1417 SRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460

[Close]

BLAST of Cmc03g0069941 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-27
Identity = 61/133 (45.86%), Postives = 87/133 (65.41%), Query Frame = 0


Query: 72  MNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNILRYLKRTKDYM 131
           M N+PY SAVG++MY M+ TRPD+  +VG++S++ S+P   HW  +K +LRYL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 132 LVYGSKDLI-LTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEY 191
           L +       L GY D+D+  D ++R+STS  +F LNGG V WRS KQ  +  S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 192 VAACEEAKEVVWL 204
           +A  E  +E VWL
Sbjct: 121 MALSEATQEAVWL 133

[Close]

BLAST of Cmc03g0069941 vs. ExPASy TrEMBL
Match: A0A5A7VMF5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00220 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.5e-144
Identity = 254/296 (85.81%), Postives = 273/296 (92.23%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MKDL NAQYVLGIQIV N KNK LAMSQTSYI KMLSR+K+QNSK+GLLPYRYGIHLSKE
Sbjct: 368 MKDLGNAQYVLGIQIVRNCKNKTLAMSQTSYIDKMLSRHKMQNSKKGLLPYRYGIHLSKE 427

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT+Q+V+DM+NIPYASA+GSLMYAMLCTRP+ICYSVGIVSRYQSNPGRDHWT +KNI
Sbjct: 428 QCPKTSQDVKDMSNIPYASALGSLMYAMLCTRPEICYSVGIVSRYQSNPGRDHWTAVKNI 487

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           L+YL+RTK+YMLVYGSKDLILTGYID DFQTD+DARKSTS +VFTLNGGAVVWRSIKQ C
Sbjct: 488 LKYLRRTKEYMLVYGSKDLILTGYIDYDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSC 547

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           ITDSTME EYVAA E  KE VWLKKFL  LEVVPNMH+PITLYCDNSG VANSREPRSHK
Sbjct: 548 ITDSTMEDEYVAAYEATKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGVVANSREPRSHK 607

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQG 297
           RGKHIERKYHLIREIVHRG+VTVTK+ SEQNMA PFTKALT KVF SHL GL L+G
Sbjct: 608 RGKHIERKYHLIREIVHRGDVTVTKVYSEQNMAGPFTKALTVKVFGSHLPGLALRG 663

[Close]

BLAST of Cmc03g0069941 vs. ExPASy TrEMBL
Match: A0A5A7U945 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001000 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.7e-142
Identity = 248/292 (84.93%), Postives = 268/292 (91.78%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MKDL NAQYVLGI+IV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKE
Sbjct: 331 MKDLENAQYVLGIEIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKSLLPYRYGIHLSKE 390

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT QEV+DM+NIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPG DHWT +KNI
Sbjct: 391 QCPKTPQEVKDMSNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGSDHWTAVKNI 450

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           L+YL+RTKDYMLVYGSKDLILT Y DSDFQ+D+D RKSTS +VFTLNG AVVW+ IKQ C
Sbjct: 451 LKYLRRTKDYMLVYGSKDLILTRYTDSDFQSDKDVRKSTSESVFTLNGEAVVWKRIKQSC 510

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           I DSTMEAEYVA+CE AKE VWLKKFL  LE+VPN+HLPITLYCDNSGAVANS+EPRSHK
Sbjct: 511 IADSTMEAEYVASCEAAKEAVWLKKFLTDLEIVPNIHLPITLYCDNSGAVANSQEPRSHK 570

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGL 293
           R KHIERKYHLIREI+HRG+VT+TKI SEQN+ DPFTKALTAKVFESHLH L
Sbjct: 571 RRKHIERKYHLIREIIHRGDVTITKISSEQNITDPFTKALTAKVFESHLHCL 622

[Close]

BLAST of Cmc03g0069941 vs. ExPASy TrEMBL
Match: A0A5D3DJL5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00880 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.9e-141
Identity = 251/297 (84.51%), Postives = 267/297 (89.90%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MK L NA YVL IQIV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKE
Sbjct: 287 MKYLGNAPYVLDIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKCLLPYRYGIHLSKE 346

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT QEVEDM+NIPYA A+GSLMYAMLC RPDICYSV IVS YQSNPGRDHWT +KNI
Sbjct: 347 QCPKTPQEVEDMSNIPYAFAIGSLMYAMLCIRPDICYSVRIVSTYQSNPGRDHWTVVKNI 406

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           ++YL+RTKDYM VYGSKDLILT Y DSDFQTD+DARKSTS +VF LNGGAVVWRSIKQ C
Sbjct: 407 IKYLRRTKDYMFVYGSKDLILTRYTDSDFQTDKDARKSTSGSVFILNGGAVVWRSIKQSC 466

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           I DSTME +YVAACE AKE VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK
Sbjct: 467 IADSTMEVKYVAACEAAKEAVWLKKFLTDLEVVPNMQLPITLYCDNSGAVANSREPRSHK 526

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL 298
            GKHIERKYHLIR+IVHRG+VTVTKI SE+NMADPF KALTAK+FESHLHGLGL+GL
Sbjct: 527 HGKHIERKYHLIRKIVHRGDVTVTKISSEENMADPFIKALTAKMFESHLHGLGLRGL 583

[Close]

BLAST of Cmc03g0069941 vs. ExPASy TrEMBL
Match: A0A5A7UUR4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00140 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.9e-141
Identity = 251/297 (84.51%), Postives = 267/297 (89.90%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MK L NA YVL IQIV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKE
Sbjct: 413 MKYLGNAPYVLDIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKCLLPYRYGIHLSKE 472

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT QEVEDM+NIPYA A+GSLMYAMLC RPDICYSV IVS YQSNPGRDHWT +KNI
Sbjct: 473 QCPKTPQEVEDMSNIPYAFAIGSLMYAMLCIRPDICYSVRIVSTYQSNPGRDHWTVVKNI 532

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           ++YL+RTKDYM VYGSKDLILT Y DSDFQTD+DARKSTS +VF LNGGAVVWRSIKQ C
Sbjct: 533 IKYLRRTKDYMFVYGSKDLILTRYTDSDFQTDKDARKSTSGSVFILNGGAVVWRSIKQSC 592

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           I DSTME +YVAACE AKE VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK
Sbjct: 593 IADSTMEVKYVAACEAAKEAVWLKKFLTDLEVVPNMQLPITLYCDNSGAVANSREPRSHK 652

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL 298
            GKHIERKYHLIR+IVHRG+VTVTKI SE+NMADPF KALTAK+FESHLHGLGL+GL
Sbjct: 653 HGKHIERKYHLIRKIVHRGDVTVTKISSEENMADPFIKALTAKMFESHLHGLGLRGL 709

[Close]

BLAST of Cmc03g0069941 vs. ExPASy TrEMBL
Match: A0A5A7SP86 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00440 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 5.1e-141
Identity = 251/297 (84.51%), Postives = 268/297 (90.24%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           MKDL NAQYVLG QIV NRKNK LAMSQTSYI KMLSRYK+QNSK+GLL YRYGIHLSKE
Sbjct: 67  MKDLGNAQYVLGNQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLLYRYGIHLSKE 126

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
           QCPKT QEVEDM+NIPYAS   SLMYAMLCTR DICYSV IVSRYQSNPGRDHWT +KNI
Sbjct: 127 QCPKTPQEVEDMSNIPYASPAESLMYAMLCTRSDICYSVEIVSRYQSNPGRDHWTVVKNI 186

Query: 121 LRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLC 180
           L+YL+RTKDYMLVYGS+DLILTGY +SDFQTD+DARKSTSR+VFTLN GAV WRSIKQ C
Sbjct: 187 LKYLRRTKDYMLVYGSRDLILTGYTNSDFQTDKDARKSTSRSVFTLNEGAVAWRSIKQSC 246

Query: 181 ITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHK 240
           ITDS +EA+YV ACE AKE VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK
Sbjct: 247 ITDSIVEAKYVVACEAAKEAVWLKKFLTDLEVVPNMDLPITLYCDNSGAVANSREPRSHK 306

Query: 241 RGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL 298
           +GKHIE+K+HLIREIVHRG+VT+TKI  EQNMADPFTKALT KVFESHLHGLGL  L
Sbjct: 307 QGKHIEQKHHLIREIVHRGDVTITKISFEQNMADPFTKALTTKVFESHLHGLGLSSL 363

[Close]

BLAST of Cmc03g0069941 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23
Identity = 73/255 (28.63%), Postives = 123/255 (48.24%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKE 60
           ++DL   +Y LG++I   R    + + Q  Y   +L    +   K   +P    +  S  
Sbjct: 310 LRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 369

Query: 61  QCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNI 120
                    + ++   Y   +G LMY  + TR DI ++V  +S++   P   H   +  I
Sbjct: 370 ------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 429

Query: 121 LRYLKRTKDYMLVYGSK-DLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQL 180
           L Y+K T    L Y S+ ++ L  + D+ FQ+ +D R+ST+     L    + W+S KQ 
Sbjct: 430 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 489

Query: 181 CITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSH 240
            ++ S+ EAEY A      E++WL +F + L++   +  P  L+CDN+ A+  +     H
Sbjct: 490 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFH 549

Query: 241 KRGKHIERKYHLIRE 255
           +R KHIE   H +RE
Sbjct: 550 ERTKHIESDCHSVRE 553

The following BLAST results are available for this feature:

BLAST of Cmc03g0069941 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067716.1	1.3e-143	85.81	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0052272.1	9.6e-142	84.93	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0058854.1	8.1e-141	84.51	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK23767.1	8.1e-141	84.51	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0033024.1	1.1e-140	84.51	gag/pol protein [Cucumis melo var. makuwa] >TYK03441.1 gag/pol protein [Cucumis ...	[more]

BLAST of Cmc03g0069941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.1e-67	45.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	9.0e-42	34.98	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.2e-31	31.19	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.7e-30	31.86	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P0CV72	1.6e-27	45.86	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc03g0069941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VMF5	6.5e-144	85.81	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G0022...	[more]
A0A5A7U945	4.7e-142	84.93	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G0010...	[more]
A0A5D3DJL5	3.9e-141	84.51	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G008...	[more]
A0A5A7UUR4	3.9e-141	84.51	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00140...	[more]
A0A5A7SP86	5.1e-141	84.51	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G0044...	[more]

BLAST of Cmc03g0069941 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.3e-23	28.63	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF273	RIBOSOME BIOGENESIS PROTEIN BOP1 HOMOLOG	coord: 153..257
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 153..257
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 142..283 e-value: 8.63924E-62 score: 190.372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0069941.1	Cmc03g0069941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding