Cmc03g0069861 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0069861
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 15342199 .. 15342669 (+)
RNA-Seq Expression	Cmc03g0069861
Synteny	Cmc03g0069861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTGGTAGCTCATGCTCTTAGTAGAAAGATATCACATTCAGCAGCACTTATTACCAGACAAAGCCCGTTGTCTCAAGATTTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGTAGTCGATTCGCAGTTAGCTCAGTTGTCGGTGCAGCCGACTTTGAGGCAGAATATTGTTGTTGCTCAGCGTAACGATCCTTATTTGGTTGAGAAGTGGGAAAATGTATCGGAATGGAAGTGGGAAAATGTTTCCATGGATTTCATTACAGGACTGCCTAGAACTCTGAGGGATTTTACAGTAATTTGGATTGTCGTGGACAAGCTTACCAAATCAGCGCACTTTATTCCGGGAAAATCCACTTATAGTGCTAGTAAATGGGCACAGTTGTACTTAACTGAGATAGTGAAACTGCATGGAGTACCAGTGTCGATTGTTTCTAATAGAGATGCTTGTTTCACTTCCAAATTTTGA

mRNA sequence

ATGAATGTGGTAGCTCATGCTCTTAGTAGAAAGATATCACATTCAGCAGCACTTATTACCAGACAAAGCCCGTTGTCTCAAGATTTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGTAGTCGATTCGCAGTTAGCTCAGTTGTCGGTGCAGCCGACTTTGAGGCAGAATATTGTTGTTGCTCAGCGTAACGATCCTTATTTGGTTGAGAAGTGGGAAAATGTATCGGAATGGAAGTGGGAAAATGTTTCCATGGATTTCATTACAGGACTGCCTAGAACTCTGAGGGATTTTACAGTAATTTGGATTGTCGTGGACAAGCTTACCAAATCAGCGCACTTTATTCCGGGAAAATCCACTTATAGTGCTAGTAAATGGGCACAGTTGTACTTAACTGAGATAGTGAAACTGCATGGAGTACCAGTGTCGATTGTTTCTAATAGAGATGCTTGTTTCACTTCCAAATTTTGA

Coding sequence (CDS)

ATGAATGTGGTAGCTCATGCTCTTAGTAGAAAGATATCACATTCAGCAGCACTTATTACCAGACAAAGCCCGTTGTCTCAAGATTTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGTAGTCGATTCGCAGTTAGCTCAGTTGTCGGTGCAGCCGACTTTGAGGCAGAATATTGTTGTTGCTCAGCGTAACGATCCTTATTTGGTTGAGAAGTGGGAAAATGTATCGGAATGGAAGTGGGAAAATGTTTCCATGGATTTCATTACAGGACTGCCTAGAACTCTGAGGGATTTTACAGTAATTTGGATTGTCGTGGACAAGCTTACCAAATCAGCGCACTTTATTCCGGGAAAATCCACTTATAGTGCTAGTAAATGGGCACAGTTGTACTTAACTGAGATAGTGAAACTGCATGGAGTACCAGTGTCGATTGTTTCTAATAGAGATGCTTGTTTCACTTCCAAATTTTGA

Protein sequence

MNVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVAQRNDPYLVEKWENVSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKSTYSASKWAQLYLTEIVKLHGVPVSIVSNRDACFTSKF

Homology

[Close]

BLAST of Cmc03g0069861 vs. NCBI nr
Match: KAA0049644.1 (pol protein [Cucumis melo var. makuwa] >TYK08903.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.9 bits (616), Expect = 3.7e-60
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MNVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVV 60
           MNVVA+A SRKISHSAALITRQ+PL QDFERAEIAVSVGVVD QLAQLSVQ TLRQNIVV
Sbjct: 1   MNVVANAHSRKISHSAALITRQTPLYQDFERAEIAVSVGVVDLQLAQLSVQLTLRQNIVV 60

Query: 61  AQRNDPYLVEKWENVSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKST 120
            Q NDPYLVEKWENVSEWKWENVSMDFITGLPRTLR FTVIWIVVD+LTKSAHFIPGKST
Sbjct: 61  TQCNDPYLVEKWENVSEWKWENVSMDFITGLPRTLRGFTVIWIVVDRLTKSAHFIPGKST 120

Query: 121 YSASKWAQLYLTEIVKL 138
           Y+ASKWAQLYLTEI  +
Sbjct: 121 YTASKWAQLYLTEIAAM 137

[Close]

BLAST of Cmc03g0069861 vs. NCBI nr
Match: KAA0063715.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 2.2e-57
Identity = 127/201 (63.18%), Postives = 143/201 (71.14%), Query Frame = 0


Query: 2    NVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVA 61
            NVVA ALSRK+SHSAALITRQ+PL +D ERAEIAVSVG V  QLAQL+VQPTLRQ I+ A
Sbjct: 1066 NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGPVTMQLAQLTVQPTLRQRIIGA 1125

Query: 62   QRNDPYLVEK---------------------WE-------------------------NV 121
            Q NDPYLVEK                     +E                         ++
Sbjct: 1126 QSNDPYLVEKRGLAEAGQADGFSISSDGGLVFERRLCVPSDSAVKAPRQKPAGLLQPLSI 1185

Query: 122  SEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKSTYSASKWAQLYLTEIV 157
             EWKWENVSMDFITGLPRTLR FTVIW+VVD+LTKSAHF+PGKSTY+ASKWAQLY++EIV
Sbjct: 1186 PEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV 1245

[Close]

BLAST of Cmc03g0069861 vs. NCBI nr
Match: KAA0043555.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.4 bits (581), Expect = 4.2e-56
Identity = 127/219 (57.99%), Postives = 142/219 (64.84%), Query Frame = 0


Query: 2   NVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVA 61
           NVVA ALSRK+SHSAALITRQ+PL +D E+AEI VSVGVV  QLAQL+VQPTLRQ I+ A
Sbjct: 750 NVVADALSRKVSHSAALITRQAPLHRDLEQAEIVVSVGVVTMQLAQLTVQPTLRQRIIDA 809

Query: 62  QRNDPYLVEKWE------------------------------------------------ 121
           QRNDPYLVEK                                                  
Sbjct: 810 QRNDPYLVEKHGLAEAGQAVGFSISSDGGLLFERRLCVPSVSAVKTELLSEAHSSPISMH 869

Query: 122 ----------------NVSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPG 157
                           ++ EWKWENVSMDFITGLPRTLR FTVIW+VVD+LTKSAHF+PG
Sbjct: 870 PVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPG 929

[Close]

BLAST of Cmc03g0069861 vs. NCBI nr
Match: TYK06287.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 7.2e-56
Identity = 128/228 (56.14%), Postives = 142/228 (62.28%), Query Frame = 0


Query: 2   NVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVA 61
           NVVA ALSRK+SHSAALITRQ+PL +D ERAEIAVSVG V  QLAQL+VQPTLRQ I+ A
Sbjct: 247 NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 306

Query: 62  QRNDPYLVEK----------------------------------------WEN------- 121
           QRNDPYLVEK                                        W N       
Sbjct: 307 QRNDPYLVEKRGLADAGQAVEFSISSDGGLLFERRLCSTKMYQDLKRVYWWRNMKREVAE 366

Query: 122 --------------------------VSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKL 157
                                     + +WKWENVSMDFITGLPRTLR F VIW VVDKL
Sbjct: 367 FVSRCLVCQQVKAPRQKPAGLLQPLSILKWKWENVSMDFITGLPRTLRGFIVIWAVVDKL 426

[Close]

BLAST of Cmc03g0069861 vs. NCBI nr
Match: KAA0047535.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 7.2e-56
Identity = 128/228 (56.14%), Postives = 142/228 (62.28%), Query Frame = 0


Query: 2   NVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVA 61
           NVVA ALSRK+SHSAALITRQ+PL +D ERAEIAVSVG V  QLAQL+VQPTLRQ I+ A
Sbjct: 247 NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 306

Query: 62  QRNDPYLVEK----------------------------------------WEN------- 121
           QRNDPYLVEK                                        W N       
Sbjct: 307 QRNDPYLVEKRGLADAGQAVEFSISSDGGLLFERRLCSTKMYQDLKRVYWWRNMKREVAE 366

Query: 122 --------------------------VSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKL 157
                                     + +WKWENVSMDFITGLPRTLR F VIW VVDKL
Sbjct: 367 FVSRCLVCQQVKAPRQKPAGLLQPLSILKWKWENVSMDFITGLPRTLRGFIVIWAVVDKL 426

[Close]

BLAST of Cmc03g0069861 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 71.6 bits (174), Expect = 8.7e-12
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 75   VSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKSTYSASKWAQLYLTEI 134
            ++E +W ++SMDF+TGLP T  +  +I +VVD+ +K AHFI  + T  A++   L    I
Sbjct: 1164 IAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYI 1223

Query: 135  VKLHGVPVSIVSNRDACFTS 155
               HG P +I S+RD   T+
Sbjct: 1224 FSYHGFPRTITSDRDVRMTA 1243

[Close]

BLAST of Cmc03g0069861 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 8.7e-12
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 75   VSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKSTYSASKWAQLYLTEI 134
            ++E +W ++SMDF+TGLP T  +  +I +VVD+ +K AHFI  + T  A++   L    I
Sbjct: 1190 IAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYI 1249

Query: 135  VKLHGVPVSIVSNRDACFTS 155
               HG P +I S+RD   T+
Sbjct: 1250 FSYHGFPRTITSDRDVRMTA 1269

[Close]

BLAST of Cmc03g0069861 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 27/80 (33.75%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 76   SEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKSTYSASKWAQLYLTEIV 135
            SE  WE++SMDFIT LP +   +  +++VVD+ +K A  +P   + +A + A+++   ++
Sbjct: 980  SERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1039

Query: 136  KLHGVPVSIVSNRDACFTSK 156
               G P  I+++ D  FTS+
Sbjct: 1040 AYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc03g0069861 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 27/80 (33.75%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 76   SEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKSTYSASKWAQLYLTEIV 135
            SE  WE++SMDFIT LP +   +  +++VVD+ +K A  +P   + +A + A+++   ++
Sbjct: 980  SERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1039

Query: 136  KLHGVPVSIVSNRDACFTSK 156
               G P  I+++ D  FTS+
Sbjct: 1040 AYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc03g0069861 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 27/80 (33.75%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 76   SEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKSTYSASKWAQLYLTEIV 135
            SE  WE++SMDFIT LP +   +  +++VVD+ +K A  +P   + +A + A+++   ++
Sbjct: 980  SERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1039

Query: 136  KLHGVPVSIVSNRDACFTSK 156
               G P  I+++ D  FTS+
Sbjct: 1040 AYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc03g0069861 vs. ExPASy TrEMBL
Match: A0A5D3CAL8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold383G00110 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MNVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVV 60
           MNVVA+A SRKISHSAALITRQ+PL QDFERAEIAVSVGVVD QLAQLSVQ TLRQNIVV
Sbjct: 1   MNVVANAHSRKISHSAALITRQTPLYQDFERAEIAVSVGVVDLQLAQLSVQLTLRQNIVV 60

Query: 61  AQRNDPYLVEKWENVSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKST 120
            Q NDPYLVEKWENVSEWKWENVSMDFITGLPRTLR FTVIWIVVD+LTKSAHFIPGKST
Sbjct: 61  TQCNDPYLVEKWENVSEWKWENVSMDFITGLPRTLRGFTVIWIVVDRLTKSAHFIPGKST 120

Query: 121 YSASKWAQLYLTEIVKL 138
           Y+ASKWAQLYLTEI  +
Sbjct: 121 YTASKWAQLYLTEIAAM 137

[Close]

BLAST of Cmc03g0069861 vs. ExPASy TrEMBL
Match: A0A5A7VCR4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002380 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 127/201 (63.18%), Postives = 143/201 (71.14%), Query Frame = 0


Query: 2    NVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVA 61
            NVVA ALSRK+SHSAALITRQ+PL +D ERAEIAVSVG V  QLAQL+VQPTLRQ I+ A
Sbjct: 1066 NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGPVTMQLAQLTVQPTLRQRIIGA 1125

Query: 62   QRNDPYLVEK---------------------WE-------------------------NV 121
            Q NDPYLVEK                     +E                         ++
Sbjct: 1126 QSNDPYLVEKRGLAEAGQADGFSISSDGGLVFERRLCVPSDSAVKAPRQKPAGLLQPLSI 1185

Query: 122  SEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPGKSTYSASKWAQLYLTEIV 157
             EWKWENVSMDFITGLPRTLR FTVIW+VVD+LTKSAHF+PGKSTY+ASKWAQLY++EIV
Sbjct: 1186 PEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV 1245

[Close]

BLAST of Cmc03g0069861 vs. ExPASy TrEMBL
Match: A0A5A7TQ69 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00590 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.0e-56
Identity = 127/219 (57.99%), Postives = 142/219 (64.84%), Query Frame = 0


Query: 2   NVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVA 61
           NVVA ALSRK+SHSAALITRQ+PL +D E+AEI VSVGVV  QLAQL+VQPTLRQ I+ A
Sbjct: 750 NVVADALSRKVSHSAALITRQAPLHRDLEQAEIVVSVGVVTMQLAQLTVQPTLRQRIIDA 809

Query: 62  QRNDPYLVEKWE------------------------------------------------ 121
           QRNDPYLVEK                                                  
Sbjct: 810 QRNDPYLVEKHGLAEAGQAVGFSISSDGGLLFERRLCVPSVSAVKTELLSEAHSSPISMH 869

Query: 122 ----------------NVSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKLTKSAHFIPG 157
                           ++ EWKWENVSMDFITGLPRTLR FTVIW+VVD+LTKSAHF+PG
Sbjct: 870 PVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPG 929

[Close]

BLAST of Cmc03g0069861 vs. ExPASy TrEMBL
Match: A0A5D3C3A1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00720 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.5e-56
Identity = 128/228 (56.14%), Postives = 142/228 (62.28%), Query Frame = 0


Query: 2   NVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVA 61
           NVVA ALSRK+SHSAALITRQ+PL +D ERAEIAVSVG V  QLAQL+VQPTLRQ I+ A
Sbjct: 247 NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 306

Query: 62  QRNDPYLVEK----------------------------------------WEN------- 121
           QRNDPYLVEK                                        W N       
Sbjct: 307 QRNDPYLVEKRGLADAGQAVEFSISSDGGLLFERRLCSTKMYQDLKRVYWWRNMKREVAE 366

Query: 122 --------------------------VSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKL 157
                                     + +WKWENVSMDFITGLPRTLR F VIW VVDKL
Sbjct: 367 FVSRCLVCQQVKAPRQKPAGLLQPLSILKWKWENVSMDFITGLPRTLRGFIVIWAVVDKL 426

[Close]

BLAST of Cmc03g0069861 vs. ExPASy TrEMBL
Match: A0A5A7U1M8 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2963G00110 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.5e-56
Identity = 128/228 (56.14%), Postives = 142/228 (62.28%), Query Frame = 0


Query: 2   NVVAHALSRKISHSAALITRQSPLSQDFERAEIAVSVGVVDSQLAQLSVQPTLRQNIVVA 61
           NVVA ALSRK+SHSAALITRQ+PL +D ERAEIAVSVG V  QLAQL+VQPTLRQ I+ A
Sbjct: 247 NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 306

Query: 62  QRNDPYLVEK----------------------------------------WEN------- 121
           QRNDPYLVEK                                        W N       
Sbjct: 307 QRNDPYLVEKRGLADAGQAVEFSISSDGGLLFERRLCSTKMYQDLKRVYWWRNMKREVAE 366

Query: 122 --------------------------VSEWKWENVSMDFITGLPRTLRDFTVIWIVVDKL 157
                                     + +WKWENVSMDFITGLPRTLR F VIW VVDKL
Sbjct: 367 FVSRCLVCQQVKAPRQKPAGLLQPLSILKWKWENVSMDFITGLPRTLRGFIVIWAVVDKL 426

The following BLAST results are available for this feature:

BLAST of Cmc03g0069861 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049644.1	3.7e-60	89.78	pol protein [Cucumis melo var. makuwa] >TYK08903.1 pol protein [Cucumis melo var...	[more]
KAA0063715.1	2.2e-57	63.18	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0043555.1	4.2e-56	57.99	pol protein [Cucumis melo var. makuwa]	[more]
TYK06287.1	7.2e-56	56.14	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0047535.1	7.2e-56	56.14	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0069861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	8.7e-12	40.00	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	8.7e-12	40.00	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	3.4e-08	33.75	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.4e-08	33.75	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.4e-08	33.75	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0069861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAL8	1.8e-60	89.78	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold383G00110 PE...	[more]
A0A5A7VCR4	1.1e-57	63.18	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TQ69	2.0e-56	57.99	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33...	[more]
A0A5D3C3A1	3.5e-56	56.14	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7U1M8	3.5e-56	56.14	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc03g0069861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 71..156 e-value: 1.7E-13 score: 52.3
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 80..156
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 75..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0069861.1	Cmc03g0069861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity