Cmc03g0069511 (gene) Melon (Charmono) v1.1

Overview
NameCmc03g0069511
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPol polyprotein
LocationCMiso1.1chr03: 14661853 .. 14663085 (-)
RNA-Seq ExpressionCmc03g0069511
SyntenyCmc03g0069511
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACTCGATGATCAATTTCAAGTTGTTGTTATTATTGATAAATTATCTCAATTGTGGAAGGATTTCAAGAACACCCTAAGGCACAAAACCAAGGAGTTCTCACTGGAAAGTCTAATCACGAGGCTAAGAATAGAGGAGGAAGCAAGGAAGCATGATAAGAAAGAAGAGGTGAATGTTATCCCCAGAAAGAAGCCCACTGCAGTTTTGAAACCAGATCTGAAGCCGAAAGGGAACAAGATGAAACGAGGATCCAACAAACAAAACAACCCACAATTCAGAAGTACGATACAAATTGTTTGTTACACTTGTAATAAGCCTGATCATTTAGCTAGAAATTATAGAAACAGAAGTCATCGTGCTGCGCAGGCGAACCTGATAGAATATGAATTAGTAGCTATGATATCTTACGTTAATGTGATTGGGGGGTTTGAAGGTTGGTGGCTAGACACTGGTGCATCCCACCATGTCTGCCACAACCTTAGTTTTTTTAAAAAATATAATGAAGTTAAGGATAAGAATATCCTTTTAGGAGATCATCACACAACCAGGGTGGCCGGTATTGGAGAAGTAGAACTAAAATTCACATTCGACAAGACGCTTGTGCTGAAGGAAGTTCTACATACTCCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTCCTCAACAAGGCTGGATTCGCACAAACCACTAAAAGCAATGTATTTGTGGGGAAGGGTTATGCTACTGATGGCATGTTCAAATTGAATTTGGTAATTAATAAGATTGCATCTTCTGCTTACATGTTGACTTCTTTTAACGTTTGGCATGCTAGACTATTTCATGTTAATAAAAGATTAATTAGTAACATGAGTAGGTTAAATCTTATACCTAAGTTATCTCTGCATGATTTTGAGAAATGTACATTTTGTAGTCAAGTTAAGATAACTAAAACCTTGCATAAGTCTGTAACTAGAGTAACAGAGCCTTTAAAATTAATTCATTCCGACTTATGTGAATTTGATGGCACTTTAACTAGAAACAGTAAAAGGTATGTAATTACCTTTATAAATGACTGTTCTGACTACACTTTTATTTATCTGCTTAAAAATAAAAGTGATGCCTATGAAATGTTCAAAGTCTTCGTAACTGAAATAGAGAACCAGTTTAACAAAAGAATTAAGAGACTTTGTAGTGATAGAGTTACTAAATATGATTCAGTTGCTTTCAATGAGTTTTATAACTCAAAATGA

mRNA sequence

ATGCCACTCGATGATCAATTTCAAGTTGTTGTTATTATTGATAAATTATCTCAATTGTGGAAGGATTTCAAGAACACCCTAAGGCACAAAACCAAGGAGTTCTCACTGGAAAGTCTAATCACGAGGCTAAGAATAGAGGAGGAAGCAAGGAAGCATGATAAGAAAGAAGAGGTGAATGTTATCCCCAGAAAGAAGCCCACTGCAGTTTTGAAACCAGATCTGAAGCCGAAAGGGAACAAGATGAAACGAGGATCCAACAAACAAAACAACCCACAATTCAGAAGTACGATACAAATTGTTTGTTACACTTGTAATAAGCCTGATCATTTAGCTAGAAATTATAGAAACAGAAGTCATCGTGCTGCGCAGGCGAACCTGATAGAATATGAATTAGTAGCTATGATATCTTACGTTAATGTGATTGGGGGGTTTGAAGGTTGGTGGCTAGACACTGGTGCATCCCACCATGTCTGCCACAACCTTAGTTTTTTTAAAAAATATAATGAAGTTAAGGATAAGAATATCCTTTTAGGAGATCATCACACAACCAGGGTGGCCGGTATTGGAGAAGTAGAACTAAAATTCACATTCGACAAGACGCTTGTGCTGAAGGAAGTTCTACATACTCCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTCCTCAACAAGGCTGGATTCGCACAAACCACTAAAAGCAATGTATTTGTGGGGAAGGGTTATGCTACTGATGGCATGTTCAAATTGAATTTGGTAATTAATAAGATTGCATCTTCTGCTTACATGTTGACTTCTTTTAACGTTTGGCATGCTAGACTATTTCATGTTAATAAAAGATTAATTAGTAACATGAGTAGGTTAAATCTTATACCTAAGTTATCTCTGCATGATTTTGAGAAATGTACATTTTGTAGTCAAGTTAAGATAACTAAAACCTTGCATAAGTCTGTAACTAGAGTAACAGAGCCTTTAAAATTAATTCATTCCGACTTATGTGAATTTGATGGCACTTTAACTAGAAACAGTAAAAGGTATGTAATTACCTTTATAAATGACTGTTCTGACTACACTTTTATTTATCTGCTTAAAAATAAAAGTGATGCCTATGAAATGTTCAAAGTCTTCGTAACTGAAATAGAGAACCAGTTTAACAAAAGAATTAAGAGACTTTGTAGTGATAGAGTTACTAAATATGATTCAGTTGCTTTCAATGAGTTTTATAACTCAAAATGA

Coding sequence (CDS)

ATGCCACTCGATGATCAATTTCAAGTTGTTGTTATTATTGATAAATTATCTCAATTGTGGAAGGATTTCAAGAACACCCTAAGGCACAAAACCAAGGAGTTCTCACTGGAAAGTCTAATCACGAGGCTAAGAATAGAGGAGGAAGCAAGGAAGCATGATAAGAAAGAAGAGGTGAATGTTATCCCCAGAAAGAAGCCCACTGCAGTTTTGAAACCAGATCTGAAGCCGAAAGGGAACAAGATGAAACGAGGATCCAACAAACAAAACAACCCACAATTCAGAAGTACGATACAAATTGTTTGTTACACTTGTAATAAGCCTGATCATTTAGCTAGAAATTATAGAAACAGAAGTCATCGTGCTGCGCAGGCGAACCTGATAGAATATGAATTAGTAGCTATGATATCTTACGTTAATGTGATTGGGGGGTTTGAAGGTTGGTGGCTAGACACTGGTGCATCCCACCATGTCTGCCACAACCTTAGTTTTTTTAAAAAATATAATGAAGTTAAGGATAAGAATATCCTTTTAGGAGATCATCACACAACCAGGGTGGCCGGTATTGGAGAAGTAGAACTAAAATTCACATTCGACAAGACGCTTGTGCTGAAGGAAGTTCTACATACTCCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTCCTCAACAAGGCTGGATTCGCACAAACCACTAAAAGCAATGTATTTGTGGGGAAGGGTTATGCTACTGATGGCATGTTCAAATTGAATTTGGTAATTAATAAGATTGCATCTTCTGCTTACATGTTGACTTCTTTTAACGTTTGGCATGCTAGACTATTTCATGTTAATAAAAGATTAATTAGTAACATGAGTAGGTTAAATCTTATACCTAAGTTATCTCTGCATGATTTTGAGAAATGTACATTTTGTAGTCAAGTTAAGATAACTAAAACCTTGCATAAGTCTGTAACTAGAGTAACAGAGCCTTTAAAATTAATTCATTCCGACTTATGTGAATTTGATGGCACTTTAACTAGAAACAGTAAAAGGTATGTAATTACCTTTATAAATGACTGTTCTGACTACACTTTTATTTATCTGCTTAAAAATAAAAGTGATGCCTATGAAATGTTCAAAGTCTTCGTAACTGAAATAGAGAACCAGTTTAACAAAAGAATTAAGAGACTTTGTAGTGATAGAGTTACTAAATATGATTCAGTTGCTTTCAATGAGTTTTATAACTCAAAATGA

Protein sequence

MPLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNVIPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRNRSHRAAQANLIEYELVAMISYVNVIGGFEGWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDHHTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLLNKAGFAQTTKSNVFVGKGYATDGMFKLNLVINKIASSAYMLTSFNVWHARLFHVNKRLISNMSRLNLIPKLSLHDFEKCTFCSQVKITKTLHKSVTRVTEPLKLIHSDLCEFDGTLTRNSKRYVITFINDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRLCSDRVTKYDSVAFNEFYNSK
Homology
BLAST of Cmc03g0069511 vs. NCBI nr
Match: KAA0034938.1 (putative Polyprotein [Cucumis melo var. makuwa] >TYK21293.1 putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 707.2 bits (1824), Expect = 8.2e-200
Identity = 361/418 (86.36%), Postives = 376/418 (89.95%), Query Frame = 0

Query: 1   MPLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNV 60
           MPL DQFQV VIIDKL  LWKDFKNTLRHKTKEFSLES+ITRL+IEEE RKHDKKEEVN 
Sbjct: 26  MPL-DQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLESVITRLKIEEEGRKHDKKEEVNA 85

Query: 61  IPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRNRSHR 120
           IPRKKPTA+LKP+LK KGNKMKRGSNKQNN Q RST+QI CY CNKP HLA+N RNRS  
Sbjct: 86  IPRKKPTAILKPNLKSKGNKMKRGSNKQNNLQSRSTVQIFCYNCNKPGHLAKNCRNRSRP 145

Query: 121 AAQANLIEYELVAMISYVNVIGGFEGWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDH 180
           AAQANLIE ELVAMIS VNVIGG EGWWLDTGASHHVCH LS F+KYNEVKDKNILLGDH
Sbjct: 146 AAQANLIEDELVAMISKVNVIGGSEGWWLDTGASHHVCHELSLFRKYNEVKDKNILLGDH 205

Query: 181 HTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLLNKAGFAQT--------TK 240
           HTT+V GIGEVELKFT DKTLV+KE LHTPEIRKNLV GYLLNKAGF QT        TK
Sbjct: 206 HTTKVVGIGEVELKFTSDKTLVVKEGLHTPEIRKNLVFGYLLNKAGFTQTIGSNLFTLTK 265

Query: 241 SNVFVGKGYATDGMFKLNLVINKIASSAYMLTSFNVWHARLFHVNKRLISNMSRLNLIPK 300
           +NVFVGKGYATDGMFKLNL INKIASSAYMLTSFNVWHARL HVNKRLISNMSRLNLIPK
Sbjct: 266 NNVFVGKGYATDGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPK 325

Query: 301 LSLHDFEKCTFCSQVKITKTLHKSVTRVTEPLKLIHSDLCEFDGTLTRNSKRYVITFIND 360
           LSLHDFEKC  CSQ KITKT HK VTRVT+PL+LIHSDLCEFDGTLTRNSKRYV+TFI+D
Sbjct: 326 LSLHDFEKCACCSQAKITKTSHKFVTRVTKPLELIHSDLCEFDGTLTRNSKRYVVTFIDD 385

Query: 361 CSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRLCSDRVTKYDSVAFNEFYNSK 411
           CSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRL SDR T+YDSVAFNEFYNSK
Sbjct: 386 CSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSK 442

BLAST of Cmc03g0069511 vs. NCBI nr
Match: KAA0055815.1 (putative Polyprotein [Cucumis melo var. makuwa] >TYK10066.1 putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 570.9 bits (1470), Expect = 9.1e-159
Identity = 302/375 (80.53%), Postives = 314/375 (83.73%), Query Frame = 0

Query: 1   MPLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNV 60
           MPLDDQFQV VIIDKL  LWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEE NV
Sbjct: 1   MPLDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEGNV 60

Query: 61  IPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRNRSHR 120
           IPRKK TAVLK DLK KGNKMKRG NKQNNPQ RST+QIVCY CNKP HLARN RNRS  
Sbjct: 61  IPRKKLTAVLKLDLKLKGNKMKRGFNKQNNPQSRSTVQIVCYNCNKPGHLARNCRNRSRP 120

Query: 121 AAQANLIEYELVAMISYVNVIGGFEGWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDH 180
           AAQANLIE ELVAMI  VNVIG  EGWWLDTGAS HV H+LS F+KYNEVKDKNILLGDH
Sbjct: 121 AAQANLIEDELVAMIFEVNVIGRSEGWWLDTGASRHVYHDLSLFRKYNEVKDKNILLGDH 180

Query: 181 HTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLLNKAGFAQT--------TK 240
           H T+V GIGEVELKFT  KTLVLKEVLHT E RKNLVSGYLLNK G  QT        TK
Sbjct: 181 HRTKVVGIGEVELKFTSGKTLVLKEVLHTSEFRKNLVSGYLLNKDGSTQTIGFDLFTLTK 240

Query: 241 SNVFVGKGYATDGMFKLNLVINKIASSAYMLTSFNVWHARLFHVNKRLISNMSRLNLIPK 300
           +NVFVGKGYATD MFKLNL INKIASSAYMLT FN WHARL HVNKRLISNMSRLNLIPK
Sbjct: 241 NNVFVGKGYATDDMFKLNLKINKIASSAYMLTFFNDWHARLCHVNKRLISNMSRLNLIPK 300

Query: 301 LSLHDFEKCTFCSQVKITKTLHKSVTRVTEPLKLIHSDLCEFDGTLTRNSKR--YVITFI 360
           LSLHDFEKC  CSQ KITKTLHKSVTRVTEPL+LIHSDLCEFDGTLTRNSKR  +++   
Sbjct: 301 LSLHDFEKCARCSQAKITKTLHKSVTRVTEPLELIHSDLCEFDGTLTRNSKRTWHLVDLP 360

Query: 361 NDCSDYTFIYLLKNK 366
             C      ++L+ K
Sbjct: 361 TGCKAIGCKWVLRKK 375

BLAST of Cmc03g0069511 vs. NCBI nr
Match: XP_021732277.1 (uncharacterized protein LOC110699091 [Chenopodium quinoa])

HSP 1 Score: 463.4 bits (1191), Expect = 2.1e-126
Identity = 246/398 (61.81%), Postives = 292/398 (73.37%), Query Frame = 0

Query: 1   MPLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEV-- 60
           M LD+QFQ+ VIIDKL   WKDFKN LRHKTKEFSLESLITRLRIEEE+RK D KEE+  
Sbjct: 338 MALDEQFQIAVIIDKLPPSWKDFKNNLRHKTKEFSLESLITRLRIEEESRKQDLKEEILQ 397

Query: 61  ---NVIPRKKPTAVLKP---DLKP--------KGNKMKRGSNKQNNPQFRSTIQIVCYTC 120
              N  PR+   AVLKP   + KP        K N  K    +Q+ P    T Q +CY C
Sbjct: 398 ISANNAPRRS-AAVLKPAGKNFKPQNRKNNFNKPNVQKNNGRQQSQPPKNGTGQFLCYRC 457

Query: 121 NKPDHLARNYRNRSHRA-AQANLIEYELVAMISYVNVIGGFEGWWLDTGASHHVCHNLSF 180
            KP H+AR  RN  +   AQA++IE   VAMI+ +N+ GG +GWW+DTGA+ HVC++   
Sbjct: 458 GKPGHMARKCRNMPNPVPAQASMIEEPFVAMITEINLTGGSDGWWIDTGATRHVCYDRRM 517

Query: 181 FKKYNE-VKDKNILLGDHHTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLL 240
           FK Y E   DK +LLGD H+T +AG+G VELKFT  +TL+LK+VLHTPE+RKNLVSG+LL
Sbjct: 518 FKTYTEKTDDKKVLLGDSHSTNIAGVGNVELKFTSGRTLILKDVLHTPEMRKNLVSGFLL 577

Query: 241 NKAGFAQT--------TKSNVFVGKGYATDGMFKLNLVINKIASSAYMLTS-FNVWHARL 300
           NKAGF QT        TK+ +FVGKGYATDGMFKLN+ +NKI++SAYML S  NVWH RL
Sbjct: 578 NKAGFIQTIGSDLFTLTKNGIFVGKGYATDGMFKLNVEVNKISNSAYMLCSTINVWHTRL 637

Query: 301 FHVNKRLISNMSRLNLIPKLSLHDFEKCTFCSQVKITKTLHKSVTRVTEPLKLIHSDLCE 360
            HVNKRLI NMS L LIP +SL+DF+KC  CSQ KITKT HKSV R +EPL LIHSD+CE
Sbjct: 638 CHVNKRLIKNMSNLGLIPNISLNDFDKCDSCSQAKITKTPHKSVIRNSEPLDLIHSDICE 697

Query: 361 FDGTLTRNSKRYVITFINDCSDYTFIYLLKNKSDAYEM 372
            +GTLTRN +RY ITFI+DCSDYT IYL+KNKSDA+EM
Sbjct: 698 LNGTLTRNGQRYFITFIDDCSDYTCIYLMKNKSDAFEM 734

BLAST of Cmc03g0069511 vs. NCBI nr
Match: KAA0067915.1 (putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 441.4 bits (1134), Expect = 8.4e-120
Identity = 228/274 (83.21%), Postives = 236/274 (86.13%), Query Frame = 0

Query: 1   MPLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNV 60
           MPLDDQFQV VIIDKL  LWKDFKNTLRHKTKEF LESLITRL IEEE RKHDKKEEVN 
Sbjct: 60  MPLDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFLLESLITRLMIEEEVRKHDKKEEVNA 119

Query: 61  IPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRNRSHR 120
           IP+KKPT VLK DLKPKGNKMKRGSNKQNNPQ +ST+QIVCY CNK  HLARN RNRSH 
Sbjct: 120 IPKKKPTVVLKSDLKPKGNKMKRGSNKQNNPQSKSTVQIVCYNCNKLGHLARNCRNRSHP 179

Query: 121 AAQANLIEYELVAMISYVNVIGGFEGWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDH 180
            AQANLIE ELVAMI  VNVIGG EGWWLDTGA  HVCH+LS F+KYNEVKDKNILLGDH
Sbjct: 180 VAQANLIENELVAMIFEVNVIGGSEGWWLDTGAFPHVCHDLSLFRKYNEVKDKNILLGDH 239

Query: 181 HTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLLNKAGFAQT--------TK 240
           HTT+V  IGEVELKFTFDK LVLKEVLHTP+IRKNLVS YLLNKAGF QT        TK
Sbjct: 240 HTTKVIDIGEVELKFTFDKMLVLKEVLHTPKIRKNLVSRYLLNKAGFTQTIGSDLFTLTK 299

Query: 241 SNVFVGKGYATDGMFKLNLVINKIASSAYMLTSF 267
           +NVFV KGYATDGMFKLNL INKIASSAYMLTSF
Sbjct: 300 NNVFVKKGYATDGMFKLNLEINKIASSAYMLTSF 333

BLAST of Cmc03g0069511 vs. NCBI nr
Match: KAA0033740.1 (hypothetical protein E6C27_scaffold239G002160 [Cucumis melo var. makuwa])

HSP 1 Score: 410.2 bits (1053), Expect = 2.1e-110
Identity = 213/261 (81.61%), Postives = 224/261 (85.82%), Query Frame = 0

Query: 33  EFSLESLITRLRIEEEARKHDKKEEVNVIPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQ 92
           +FSLESLITRLRIEEEARK++KKEEVN IP+KKPTAVLKPDLK KGNKMKR SNKQ NP 
Sbjct: 49  KFSLESLITRLRIEEEARKYNKKEEVNAIPKKKPTAVLKPDLKSKGNKMKRESNKQKNPP 108

Query: 93  FRSTIQIVCYTCNKPDHLARNYRNRSHRAAQANLIEYELVAMISYVNVIGGFEGWWLDTG 152
            + T+QIVCY CNK  HLARN RNRS  AAQAN IE ELVAMIS VNVIGG EGWWLDTG
Sbjct: 109 SKRTVQIVCYNCNKSGHLARNCRNRSRPAAQANQIEDELVAMISEVNVIGGSEGWWLDTG 168

Query: 153 ASHHVCHNLSFFKKYNEVKDKNILLGDHHTTRVAGIGEVELKFTFDKTLVLKEVLHTPEI 212
           AS HVCH+LS F+KYNEVKDK+ILLGDHHTT+VA IGEVELKFT  K LVLKEVLHTPEI
Sbjct: 169 ASRHVCHDLSLFRKYNEVKDKSILLGDHHTTKVADIGEVELKFTSSKVLVLKEVLHTPEI 228

Query: 213 RKNLVSGYLLNKAGFAQT--------TKSNVFVGKGYATDGMFKLNLVINKIASSAYMLT 272
           RKNLV GYLLNK GF QT        TK+NVFVGKGYATD MFKLNL INKIASSAYMLT
Sbjct: 229 RKNLVFGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDDMFKLNLEINKIASSAYMLT 288

Query: 273 SFNVWHARLFHVNKRLISNMS 286
           SFNVWHARL HVNKRLISNMS
Sbjct: 289 SFNVWHARLCHVNKRLISNMS 309

BLAST of Cmc03g0069511 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.0e-32
Identity = 103/435 (23.68%), Postives = 210/435 (48.28%), Query Frame = 0

Query: 3   LDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNVIP 62
           ++++ + +++++ L   + +   T+ H      L+ + + L + E+ RK  + +   +I 
Sbjct: 139 IEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALIT 198

Query: 63  RKKPTAVLKPDLKPKGNKMKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRN----RS 122
             +  +      +   N  + G+  ++  + +S ++  CY CN+P H  R+  N    + 
Sbjct: 199 EGRGRSY----QRSSNNYGRSGARGKSKNRSKSRVR-NCYNCNQPGHFKRDCPNPRKGKG 258

Query: 123 HRAAQANLIEYELVAMIS-------YVN-------VIGGFEGWWLDTGASHHVCHNLSFF 182
             + Q N  +    AM+        ++N       + G    W +DT ASHH       F
Sbjct: 259 ETSGQKN--DDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLF 318

Query: 183 KKYNEVKDKNILLGDHHTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLLNK 242
            +Y       + +G+   +++AGIG++ +K     TLVLK+V H P++R NL+SG  L++
Sbjct: 319 CRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDR 378

Query: 243 AGFA--------QTTKSNVFVGKGYATDGMFKLNL-VINKIASSAYMLTSFNVWHARLFH 302
            G+         + TK ++ + KG A   +++ N  +     ++A    S ++WH R+ H
Sbjct: 379 DGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGH 438

Query: 303 VNKRLISNMSRLNLIPKLSLHDFEKCTFCSQVKITK-TLHKSVTRVTEPLKLIHSDLCEF 362
           ++++ +  +++ +LI        + C +C   K  + +   S  R    L L++SD+C  
Sbjct: 439 MSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGP 498

Query: 363 DGTLTRNSKRYVITFINDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRLCSDR 410
               +    +Y +TFI+D S   ++Y+LK K   +++F+ F   +E +  +++KRL SD 
Sbjct: 499 MEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDN 558

BLAST of Cmc03g0069511 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 101.3 bits (251), Expect = 2.7e-20
Identity = 88/339 (25.96%), Postives = 147/339 (43.36%), Query Frame = 0

Query: 95  STIQIVCYTCNKPDHLAR---------NYRNRSHRAAQANLIEYELVAMISYVNVIGGFE 154
           S  ++ C+ C +  H+ +         N +N+ +         + +  M+  VN     +
Sbjct: 226 SKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTSVMD 285

Query: 155 --GWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDHHTTRVAGIGEVELKFTFDKTLVL 214
             G+ LD+GAS H+ ++ S +    EV     +        +       ++   D  + L
Sbjct: 286 NCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITL 345

Query: 215 KEVLHTPEIRKNLVSGYLLNKAGFA-QTTKSNVFVGKG----YATDGMFKLNLVINKIAS 274
           ++VL   E   NL+S   L +AG + +  KS V + K         GM     VIN  A 
Sbjct: 346 EDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVINFQAY 405

Query: 275 S--AYMLTSFNVWHARLFHVN---------KRLISNMSRLNLIPKLSLHDFEKCTFCSQV 334
           S  A    +F +WH R  H++         K + S+ S LN + +LS    E C    Q 
Sbjct: 406 SINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNL-ELSCEICEPCLNGKQA 465

Query: 335 KITKTLHKSVTRVTEPLKLIHSDLCEFDGTLTRNSKRYVITFINDCSDYTFIYLLKNKSD 394
           ++     K  T +  PL ++HSD+C     +T + K Y + F++  + Y   YL+K KSD
Sbjct: 466 RLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSD 525

Query: 395 AYEMFKVFVTEIENQFNKRIKRLCSDRVTKYDSVAFNEF 407
            + MF+ FV + E  FN ++  L  D   +Y S    +F
Sbjct: 526 VFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQF 563

BLAST of Cmc03g0069511 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.5e-18
Identity = 77/266 (28.95%), Postives = 134/266 (50.38%), Query Frame = 0

Query: 147 WWLDTGASHHVC---HNLSFFKKYNEVKDKNILLGDHHTTRVAGIGEVELKFTFDKTLVL 206
           W LD+GA+HH+    +NLSF + Y    D  +++ D  T  +   G   L  T  ++L L
Sbjct: 310 WLLDSGATHHITSDFNNLSFHQPYTGGDD--VMIADGSTIPITHTGSASLP-TSSRSLDL 369

Query: 207 KEVLHTPEIRKNLVSGYLL---NK-------AGF-AQTTKSNVFVGKGYATDGMFKLNLV 266
            +VL+ P I KNL+S Y L   N+       A F  +   + V + +G   D +++  + 
Sbjct: 370 NKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA 429

Query: 267 INKIAS---SAYMLTSFNVWHARLFHVNKRLISNMSRLNLIPKLS-LHDFEKCTFCSQVK 326
            ++  S   S     + + WH+RL H +  +++++   + +P L+  H    C+ C   K
Sbjct: 430 SSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINK 489

Query: 327 ITKT-LHKSVTRVTEPLKLIHSDLCEFDGTLTRNSKRYVITFINDCSDYTFIYLLKNKSD 386
             K     S    ++PL+ I+SD+      L+ ++ RY + F++  + YT++Y LK KS 
Sbjct: 490 SHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQ 549

Query: 387 AYEMFKVFVTEIENQFNKRIKRLCSD 394
             + F +F + +EN+F  RI  L SD
Sbjct: 550 VKDTFIIFKSLVENRFQTRIGTLYSD 571

BLAST of Cmc03g0069511 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-16
Identity = 112/457 (24.51%), Postives = 188/457 (41.14%), Query Frame = 0

Query: 2   PLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEV--- 61
           P+D   QV  +++ L + +K   + +  K    +L  +  RL   E          V   
Sbjct: 162 PMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPI 221

Query: 62  --NVIPRKKPTAVLKPDLKPKGNKMKRGSNKQNN----PQFRSTIQI------------V 121
             N +  +  T     +    GN+  R  N+ NN    P  +S+                
Sbjct: 222 TANAVSHRNTTTT---NNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGK 281

Query: 122 CYTCNKPDHLARNYRNRSHRAAQAN-------LIEYELVAMISYVNVIGGFEGWWLDTGA 181
           C  C    H A+      H  +  N          ++  A ++  +       W LD+GA
Sbjct: 282 CQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSS-NNWLLDSGA 341

Query: 182 SHHVC---HNLSFFKKYNEVKDKNILLGDHHTTRVAGIGEVELKFTFDKTLVLKEVLHTP 241
           +HH+    +NLS  + Y    D  +++ D  T  ++  G   L  T  + L L  +L+ P
Sbjct: 342 THHITSDFNNLSLHQPYTGGDD--VMVADGSTIPISHTGSTSLS-TKSRPLNLHNILYVP 401

Query: 242 EIRKNLVSGY-LLNKAGFA----------QTTKSNVFVGKGYATDGMFKLNLVINK---I 301
            I KNL+S Y L N  G +          +   + V + +G   D +++  +  ++   +
Sbjct: 402 NIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSL 461

Query: 302 ASSAYMLTSFNVWHARLFH----VNKRLISNMSRLNLIPKLSLHDFEKCTFCSQVKITKT 361
            +S     + + WHARL H    +   +ISN S   L P    H F  C+ C   K  K 
Sbjct: 462 FASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS---HKFLSCSDCLINKSNKV 521

Query: 362 -LHKSVTRVTEPLKLIHSDLCEFDGTLTRNSKRYVITFINDCSDYTFIYLLKNKSDAYEM 409
              +S    T PL+ I+SD+      L+ ++ RY + F++  + YT++Y LK KS   E 
Sbjct: 522 PFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKET 581

BLAST of Cmc03g0069511 vs. ExPASy TrEMBL
Match: A0A5D3DCJ1 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00010 PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 4.0e-200
Identity = 361/418 (86.36%), Postives = 376/418 (89.95%), Query Frame = 0

Query: 1   MPLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNV 60
           MPL DQFQV VIIDKL  LWKDFKNTLRHKTKEFSLES+ITRL+IEEE RKHDKKEEVN 
Sbjct: 26  MPL-DQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLESVITRLKIEEEGRKHDKKEEVNA 85

Query: 61  IPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRNRSHR 120
           IPRKKPTA+LKP+LK KGNKMKRGSNKQNN Q RST+QI CY CNKP HLA+N RNRS  
Sbjct: 86  IPRKKPTAILKPNLKSKGNKMKRGSNKQNNLQSRSTVQIFCYNCNKPGHLAKNCRNRSRP 145

Query: 121 AAQANLIEYELVAMISYVNVIGGFEGWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDH 180
           AAQANLIE ELVAMIS VNVIGG EGWWLDTGASHHVCH LS F+KYNEVKDKNILLGDH
Sbjct: 146 AAQANLIEDELVAMISKVNVIGGSEGWWLDTGASHHVCHELSLFRKYNEVKDKNILLGDH 205

Query: 181 HTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLLNKAGFAQT--------TK 240
           HTT+V GIGEVELKFT DKTLV+KE LHTPEIRKNLV GYLLNKAGF QT        TK
Sbjct: 206 HTTKVVGIGEVELKFTSDKTLVVKEGLHTPEIRKNLVFGYLLNKAGFTQTIGSNLFTLTK 265

Query: 241 SNVFVGKGYATDGMFKLNLVINKIASSAYMLTSFNVWHARLFHVNKRLISNMSRLNLIPK 300
           +NVFVGKGYATDGMFKLNL INKIASSAYMLTSFNVWHARL HVNKRLISNMSRLNLIPK
Sbjct: 266 NNVFVGKGYATDGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPK 325

Query: 301 LSLHDFEKCTFCSQVKITKTLHKSVTRVTEPLKLIHSDLCEFDGTLTRNSKRYVITFIND 360
           LSLHDFEKC  CSQ KITKT HK VTRVT+PL+LIHSDLCEFDGTLTRNSKRYV+TFI+D
Sbjct: 326 LSLHDFEKCACCSQAKITKTSHKFVTRVTKPLELIHSDLCEFDGTLTRNSKRYVVTFIDD 385

Query: 361 CSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRLCSDRVTKYDSVAFNEFYNSK 411
           CSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRL SDR T+YDSVAFNEFYNSK
Sbjct: 386 CSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSK 442

BLAST of Cmc03g0069511 vs. ExPASy TrEMBL
Match: A0A5A7UQC7 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002000 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 4.4e-159
Identity = 302/375 (80.53%), Postives = 314/375 (83.73%), Query Frame = 0

Query: 1   MPLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNV 60
           MPLDDQFQV VIIDKL  LWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEE NV
Sbjct: 1   MPLDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEGNV 60

Query: 61  IPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRNRSHR 120
           IPRKK TAVLK DLK KGNKMKRG NKQNNPQ RST+QIVCY CNKP HLARN RNRS  
Sbjct: 61  IPRKKLTAVLKLDLKLKGNKMKRGFNKQNNPQSRSTVQIVCYNCNKPGHLARNCRNRSRP 120

Query: 121 AAQANLIEYELVAMISYVNVIGGFEGWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDH 180
           AAQANLIE ELVAMI  VNVIG  EGWWLDTGAS HV H+LS F+KYNEVKDKNILLGDH
Sbjct: 121 AAQANLIEDELVAMIFEVNVIGRSEGWWLDTGASRHVYHDLSLFRKYNEVKDKNILLGDH 180

Query: 181 HTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLLNKAGFAQT--------TK 240
           H T+V GIGEVELKFT  KTLVLKEVLHT E RKNLVSGYLLNK G  QT        TK
Sbjct: 181 HRTKVVGIGEVELKFTSGKTLVLKEVLHTSEFRKNLVSGYLLNKDGSTQTIGFDLFTLTK 240

Query: 241 SNVFVGKGYATDGMFKLNLVINKIASSAYMLTSFNVWHARLFHVNKRLISNMSRLNLIPK 300
           +NVFVGKGYATD MFKLNL INKIASSAYMLT FN WHARL HVNKRLISNMSRLNLIPK
Sbjct: 241 NNVFVGKGYATDDMFKLNLKINKIASSAYMLTFFNDWHARLCHVNKRLISNMSRLNLIPK 300

Query: 301 LSLHDFEKCTFCSQVKITKTLHKSVTRVTEPLKLIHSDLCEFDGTLTRNSKR--YVITFI 360
           LSLHDFEKC  CSQ KITKTLHKSVTRVTEPL+LIHSDLCEFDGTLTRNSKR  +++   
Sbjct: 301 LSLHDFEKCARCSQAKITKTLHKSVTRVTEPLELIHSDLCEFDGTLTRNSKRTWHLVDLP 360

Query: 361 NDCSDYTFIYLLKNK 366
             C      ++L+ K
Sbjct: 361 TGCKAIGCKWVLRKK 375

BLAST of Cmc03g0069511 vs. ExPASy TrEMBL
Match: A0A5A7VQD4 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00810 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 4.0e-120
Identity = 228/274 (83.21%), Postives = 236/274 (86.13%), Query Frame = 0

Query: 1   MPLDDQFQVVVIIDKLSQLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNV 60
           MPLDDQFQV VIIDKL  LWKDFKNTLRHKTKEF LESLITRL IEEE RKHDKKEEVN 
Sbjct: 60  MPLDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFLLESLITRLMIEEEVRKHDKKEEVNA 119

Query: 61  IPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRNRSHR 120
           IP+KKPT VLK DLKPKGNKMKRGSNKQNNPQ +ST+QIVCY CNK  HLARN RNRSH 
Sbjct: 120 IPKKKPTVVLKSDLKPKGNKMKRGSNKQNNPQSKSTVQIVCYNCNKLGHLARNCRNRSHP 179

Query: 121 AAQANLIEYELVAMISYVNVIGGFEGWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDH 180
            AQANLIE ELVAMI  VNVIGG EGWWLDTGA  HVCH+LS F+KYNEVKDKNILLGDH
Sbjct: 180 VAQANLIENELVAMIFEVNVIGGSEGWWLDTGAFPHVCHDLSLFRKYNEVKDKNILLGDH 239

Query: 181 HTTRVAGIGEVELKFTFDKTLVLKEVLHTPEIRKNLVSGYLLNKAGFAQT--------TK 240
           HTT+V  IGEVELKFTFDK LVLKEVLHTP+IRKNLVS YLLNKAGF QT        TK
Sbjct: 240 HTTKVIDIGEVELKFTFDKMLVLKEVLHTPKIRKNLVSRYLLNKAGFTQTIGSDLFTLTK 299

Query: 241 SNVFVGKGYATDGMFKLNLVINKIASSAYMLTSF 267
           +NVFV KGYATDGMFKLNL INKIASSAYMLTSF
Sbjct: 300 NNVFVKKGYATDGMFKLNLEINKIASSAYMLTSF 333

BLAST of Cmc03g0069511 vs. ExPASy TrEMBL
Match: A0A5A7SS30 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G002160 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-110
Identity = 213/261 (81.61%), Postives = 224/261 (85.82%), Query Frame = 0

Query: 33  EFSLESLITRLRIEEEARKHDKKEEVNVIPRKKPTAVLKPDLKPKGNKMKRGSNKQNNPQ 92
           +FSLESLITRLRIEEEARK++KKEEVN IP+KKPTAVLKPDLK KGNKMKR SNKQ NP 
Sbjct: 49  KFSLESLITRLRIEEEARKYNKKEEVNAIPKKKPTAVLKPDLKSKGNKMKRESNKQKNPP 108

Query: 93  FRSTIQIVCYTCNKPDHLARNYRNRSHRAAQANLIEYELVAMISYVNVIGGFEGWWLDTG 152
            + T+QIVCY CNK  HLARN RNRS  AAQAN IE ELVAMIS VNVIGG EGWWLDTG
Sbjct: 109 SKRTVQIVCYNCNKSGHLARNCRNRSRPAAQANQIEDELVAMISEVNVIGGSEGWWLDTG 168

Query: 153 ASHHVCHNLSFFKKYNEVKDKNILLGDHHTTRVAGIGEVELKFTFDKTLVLKEVLHTPEI 212
           AS HVCH+LS F+KYNEVKDK+ILLGDHHTT+VA IGEVELKFT  K LVLKEVLHTPEI
Sbjct: 169 ASRHVCHDLSLFRKYNEVKDKSILLGDHHTTKVADIGEVELKFTSSKVLVLKEVLHTPEI 228

Query: 213 RKNLVSGYLLNKAGFAQT--------TKSNVFVGKGYATDGMFKLNLVINKIASSAYMLT 272
           RKNLV GYLLNK GF QT        TK+NVFVGKGYATD MFKLNL INKIASSAYMLT
Sbjct: 229 RKNLVFGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDDMFKLNLEINKIASSAYMLT 288

Query: 273 SFNVWHARLFHVNKRLISNMS 286
           SFNVWHARL HVNKRLISNMS
Sbjct: 289 SFNVWHARLCHVNKRLISNMS 309

BLAST of Cmc03g0069511 vs. ExPASy TrEMBL
Match: A0A5D3DRT2 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00180 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 2.0e-106
Identity = 214/274 (78.10%), Postives = 222/274 (81.02%), Query Frame = 0

Query: 21  KDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNVIPRKKPTAVLKPDLKPKGNK 80
           +DFKNTLRHKTKE SL+SLITRLRIEEEARKH+KKEEVN IPRKKPTAVLKPDLKPKGNK
Sbjct: 135 EDFKNTLRHKTKELSLKSLITRLRIEEEARKHNKKEEVNAIPRKKPTAVLKPDLKPKGNK 194

Query: 81  MKRGSNKQNNPQFRSTIQIVCYTCNKPDHLARNYRNRSHRAAQANLIEYELVAMISYVNV 140
           MKR SNKQNNPQ RST                           ANLIE ELVAMIS VNV
Sbjct: 195 MKRESNKQNNPQSRST---------------------------ANLIEDELVAMISEVNV 254

Query: 141 IGGFEGWWLDTGASHHVCHNLSFFKKYNEVKDKNILLGDHHTTRVAGIGEVELKFTFDKT 200
           I GFEGWWLDTGASHHVCH+LS F+KYNEVKDK ILLGDHHTT+VAGIG+VELKFT  K 
Sbjct: 255 IRGFEGWWLDTGASHHVCHDLSIFRKYNEVKDKKILLGDHHTTKVAGIGKVELKFTSGKM 314

Query: 201 LVLKEVLHTPEIRKNLVSGYLLNKAGFAQT--------TKSNVFVGKGYATDGMFKLNLV 260
           LVLKEVLHT EIRKNLVS YLLNKAGF QT        TK+NVFVGKGYATDGMFKLNL 
Sbjct: 315 LVLKEVLHTLEIRKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLNLK 374

Query: 261 INKIASSAYMLTSFNVWHARLFHVNKRLISNMSR 287
           INKIASSAYMLTSFNVWHARL HVNKRLISNMSR
Sbjct: 375 INKIASSAYMLTSFNVWHARLCHVNKRLISNMSR 381

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0034938.18.2e-20086.36putative Polyprotein [Cucumis melo var. makuwa] >TYK21293.1 putative Polyprotein... [more]
KAA0055815.19.1e-15980.53putative Polyprotein [Cucumis melo var. makuwa] >TYK10066.1 putative Polyprotein... [more]
XP_021732277.12.1e-12661.81uncharacterized protein LOC110699091 [Chenopodium quinoa][more]
KAA0067915.18.4e-12083.21putative Polyprotein [Cucumis melo var. makuwa][more]
KAA0033740.12.1e-11081.61hypothetical protein E6C27_scaffold239G002160 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109784.0e-3223.68Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.7e-2025.96Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT942.5e-1828.95Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.8e-1624.51Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A5D3DCJ14.0e-20086.36Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119... [more]
A0A5A7UQC74.4e-15980.53Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G... [more]
A0A5A7VQD44.0e-12083.21Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138... [more]
A0A5A7SS301.0e-11081.61CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5D3DRT22.0e-10678.10Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 253..308
e-value: 2.5E-10
score: 40.1
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 314..410
e-value: 5.7E-10
score: 40.8
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 321..408
e-value: 2.1E-8
score: 34.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 319..410
score: 8.681124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..90
NoneNo IPR availablePANTHERPTHR47592:SF5OS08G0421300 PROTEINcoord: 1..231
NoneNo IPR availablePANTHERPTHR47592PBF68 PROTEINcoord: 1..231
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 319..407

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc03g0069511.1Cmc03g0069511.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding