Homology
BLAST of Cmc03g0069431 vs. NCBI nr
Match:
PKU70861.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum])
HSP 1 Score: 228.0 bits (580), Expect = 8.5e-56
Identity = 111/231 (48.05%), Postives = 153/231 (66.23%), Query Frame = 0
Query: 2 HSKILNFHAKQKNSSLWHFRLGHLAPKILILILSRIGLSMSSSLSTCNCTSCLKAKMKNL 61
H+ A + +S++WH RLGH + + LI S + S+S+ C +C K +
Sbjct: 435 HTSQTALQASRSSSAVWHNRLGHPNQRTMRLIASAYP-QLHISISSFQCVACSSCKGHKM 494
Query: 62 PFPMSLSTSLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSI 121
PF S + TPLAL+HSDVWGPSP+ S+ G +YYV+FID+FS++TW+FP + KSDVP I
Sbjct: 495 PFSKSCNRMKTPLALLHSDVWGPSPVTSNQGFRYYVTFIDDFSRYTWIFPCSNKSDVPHI 554
Query: 122 VQEFNPFIENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHK 181
F FIENQ + K+K+ R DGG E+ N +L F GI HQ SCPYTP+QN +AE K
Sbjct: 555 FINFKTFIENQTNYKIKILRTDGGTEYRNITLSKFLSSNGIQHQLSCPYTPEQNGVAERK 614
Query: 182 HRPIVETTMSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
HR I+ETT +L+ +S PL+FWP A +T V+LINR+PS + + SPF+ F+
Sbjct: 615 HRHIIETTRTLLHQASVPLQFWPDAANTAVYLINRLPSSNTNNYSPFQSFY 664
BLAST of Cmc03g0069431 vs. NCBI nr
Match:
PKU66732.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum])
HSP 1 Score: 223.8 bits (569), Expect = 1.6e-54
Identity = 111/224 (49.55%), Postives = 153/224 (68.30%), Query Frame = 0
Query: 10 AKQKNSSLWHFRLGHLAPKIL-ILILSRIGLSMSSSLSTCNCTSCLKAKMKNLPFPMSLS 69
A + +S +WH RLGH + + + ++ L++S S+S C SC K +PF S +
Sbjct: 443 ATRSSSDVWHNRLGHPNQRTMRYIAIANPQLNISCSIS--KCVSCSSCKGHKIPFTKSCN 502
Query: 70 TSLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEFNPF 129
TPLAL+HSDVWGPSP++S+ G +YYV+FID+FS++TW+FPI KSDVP I F F
Sbjct: 503 RMKTPLALLHSDVWGPSPVMSNQGFRYYVTFIDDFSRYTWIFPIRNKSDVPHIFINFKIF 562
Query: 130 IENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPIVET 189
IENQ K+K+ R DGG E+ NN+L FFE GI HQ SCPYTP+QN +AE KHR I+ET
Sbjct: 563 IENQTDYKIKMLRTDGGTEYRNNTLNHFFESNGIQHQFSCPYTPEQNGVAERKHRHIIET 622
Query: 190 TMSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
T +L+ +S P +FWP A +T V+LINR+PS + + SP++ +
Sbjct: 623 TRTLLHLASVPQQFWPDAANTAVYLINRLPSSNTNNRSPYQLLY 664
BLAST of Cmc03g0069431 vs. NCBI nr
Match:
PKU85564.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum])
HSP 1 Score: 219.2 bits (557), Expect = 4.0e-53
Identity = 114/219 (52.05%), Postives = 151/219 (68.95%), Query Frame = 0
Query: 15 SSLWHFRLGHLAPKILILIL-SRIGLSMSSSLSTCNCTSCLKAKMKNLPFPMSLSTSLTP 74
+SLWH RLGH KIL I S L +SS S +CT+C++ K+ LPF +S S + TP
Sbjct: 162 NSLWHDRLGHPHFKILKNIAQSNSDLHISSVNS--SCTTCIQCKLHKLPFEISASRTNTP 221
Query: 75 LALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEFNPFIENQL 134
L+LVHSDVWGPSPI S++G +++V F+D+FS++TWLFPI +KS+V S F FIENQ
Sbjct: 222 LSLVHSDVWGPSPICSTNGFRFFVIFVDDFSRYTWLFPIIHKSEVTSTFITFTKFIENQT 281
Query: 135 SQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPIVETTMSLI 194
Q +K+ R DGG EF N +++SF KGI HQ SCPYTP+QN +AE K+R IVET L+
Sbjct: 282 KQSIKILRTDGGTEFNNYAMKSFLHSKGIGHQMSCPYTPEQNGVAERKNRHIVETVRFLL 341
Query: 195 FHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
+S P ++WP A +T V+LINRMPS + SP + F
Sbjct: 342 HKASMPFQYWPEATATAVYLINRMPSPNTQNKSPLQLLF 378
BLAST of Cmc03g0069431 vs. NCBI nr
Match:
PKU86178.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum])
HSP 1 Score: 219.2 bits (557), Expect = 4.0e-53
Identity = 106/223 (47.53%), Postives = 146/223 (65.47%), Query Frame = 0
Query: 10 AKQKNSSLWHFRLGHLAPKILILILSRIGLSMSSSLSTCNCTSCLKAKMKNLPFPMSLST 69
A SLWH RLGH + ++L + + +S S+ +C +C AK LPF S+S
Sbjct: 97 AVSSTESLWHRRLGHPSYRVLQKLQKYVSPQLSFVSSSFHCNACELAKSHKLPFTSSISR 156
Query: 70 SLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEFNPFI 129
S + L L+HSDVWGPS +IS G +YY+ F+D+FS+F+WLFP+ KS+VP I F +
Sbjct: 157 SSSVLQLIHSDVWGPSSVISLQGYKYYIIFVDDFSRFSWLFPLTAKSEVPLIFVRFQRLV 216
Query: 130 ENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPIVETT 189
E Q + K+K+FR DGG E+ + QS GI HQ +CPYTP+QN +AE KHR I+ETT
Sbjct: 217 ERQFNAKIKIFRSDGGGEYTSKQFQSLLATSGIVHQLTCPYTPEQNGLAERKHRHIIETT 276
Query: 190 MSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
+L+FHS+ P +FW +A TVV LINR+PSLS + SP++ F
Sbjct: 277 RALLFHSNIPQKFWIHAVQTVVHLINRLPSLSNKLSSPYQMLF 319
BLAST of Cmc03g0069431 vs. NCBI nr
Match:
PKU68501.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum])
HSP 1 Score: 217.6 bits (553), Expect = 1.2e-52
Identity = 110/220 (50.00%), Postives = 148/220 (67.27%), Query Frame = 0
Query: 10 AKQKNSSLWHFRLGHLAPKILILILSRIGLSMSSSLSTCNCTSCLKAKMKNLPFPMSLST 69
A +S WH RLGH P++L I S+ ++ S S C++C AK L FP+S +
Sbjct: 102 ATSSSSYRWHTRLGHPHPQVLASI-SQANRDLAISTSVFTCSTCKAAKSHKLVFPVSSRS 161
Query: 70 SLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEFNPFI 129
++TPLAL+H DVWGP+P IS G +YY+ ID+FS+FTWLF + KS+VP I+ F FI
Sbjct: 162 NVTPLALLHFDVWGPTPTISHQGYKYYLVIIDDFSRFTWLFMLRAKSEVPKIIIHFKIFI 221
Query: 130 ENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPIVETT 189
ENQLS K+K + DGG EF NN L+SF + GI H+ SCPYTP+QN +AE K+R I+ETT
Sbjct: 222 ENQLSHKIKCIQTDGGSEFTNNELKSFLQNNGIHHRISCPYTPEQNGMAERKNRHIIETT 281
Query: 190 MSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFE 230
+L+ + P +FWP A T V LINRMPS+++ +PFE
Sbjct: 282 RTLLQTAHLPYQFWPDAALTAVHLINRMPSVTIQNKTPFE 320
BLAST of Cmc03g0069431 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 6.0e-44
Identity = 94/218 (43.12%), Postives = 133/218 (61.01%), Query Frame = 0
Query: 16 SLWHFRLGHLAPKILILILSRIGLS-MSSSLSTCNCTSCLKAKMKNLPFPMSLSTSLTPL 75
S WH RLGH AP IL ++S LS ++ S +C+ CL K +PF S S PL
Sbjct: 465 SSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPL 524
Query: 76 ALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEFNPFIENQLS 135
++SDVW SPI+S +YYV F+D+F+++TWL+P+ KS V F +EN+
Sbjct: 525 EYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQ 584
Query: 136 QKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPIVETTMSLIF 195
++ F D G EF +L +F GISH S P+TP+ N ++E KHR IVET ++L+
Sbjct: 585 TRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLS 644
Query: 196 HSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
H+S P +WPYAF+ V+LINR+P+ L + SPF+K F
Sbjct: 645 HASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLF 679
BLAST of Cmc03g0069431 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 2.0e-39
Identity = 89/218 (40.83%), Postives = 128/218 (58.72%), Query Frame = 0
Query: 16 SLWHFRLGHLAPKILILILSRIGLS-MSSSLSTCNCTSCLKAKMKNLPFPMSLSTSLTPL 75
S WH RLGH + IL ++S L ++ S +C+ C K +PF S TS PL
Sbjct: 444 SSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPL 503
Query: 76 ALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEFNPFIENQLS 135
++SDVW SPI+S +YYV F+D+F+++TWL+P+ KS V F +EN+
Sbjct: 504 EYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQ 563
Query: 136 QKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPIVETTMSLIF 195
++ D G EF L+ + GISH S P+TP+ N ++E KHR IVE ++L+
Sbjct: 564 TRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLS 623
Query: 196 HSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
H+S P +WPYAFS V+LINR+P+ L + SPF+K F
Sbjct: 624 HASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLF 658
BLAST of Cmc03g0069431 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31
Identity = 74/217 (34.10%), Postives = 117/217 (53.92%), Query Frame = 0
Query: 6 LNFHAKQKNSSLWHFRLGHLAPKILILILSRIGLSMSSSLSTCNCTSCLKAKMKNLPFPM 65
LN + + LWH R+GH++ K L ++ + +S + + C CL K + F
Sbjct: 413 LNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQT 472
Query: 66 SLSTSLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEF 125
S L L LV+SDV GP I S G++Y+V+FID+ S+ W++ + K V + Q+F
Sbjct: 473 SSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKF 532
Query: 126 NPFIENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPI 185
+ +E + +K+K R D G E+ + + + GI H+K+ P TP+ N +AE +R I
Sbjct: 533 HALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTI 592
Query: 186 VETTMSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSL 223
VE S++ + P FW A T +LINR PS+ L
Sbjct: 593 VEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPL 629
BLAST of Cmc03g0069431 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 116.7 bits (291), Expect = 3.6e-25
Identity = 76/224 (33.93%), Postives = 115/224 (51.34%), Query Frame = 0
Query: 7 NFHAKQKNS-SLWHFRLGHLAPKILILILSRIGLSMSSSLS----TCN-CTSCLKAKMKN 66
+ +AK KN+ LWH R GH++ L+ I + S S L+ +C C CL K
Sbjct: 406 SINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQAR 465
Query: 67 LPFPMSLSTS--LTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDV 126
LPF + PL +VHSDV GP ++ Y+V F+D F+ + + I YKSDV
Sbjct: 466 LPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDV 525
Query: 127 PSIVQEFNPFIENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIA 186
S+ Q+F E + K+ D G E+ +N ++ F KGIS+ + P+TP+ N ++
Sbjct: 526 FSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVS 585
Query: 187 EHKHRPIVETTMSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSL 223
E R I E +++ + FW A T +LINR+PS +L
Sbjct: 586 ERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRAL 629
BLAST of Cmc03g0069431 vs. ExPASy Swiss-Prot
Match:
Q07163 (Transposon TyH3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae OX=4932 GN=TY1B PE=1 SV=2)
HSP 1 Score: 70.9 bits (172), Expect = 2.3e-11
Identity = 42/152 (27.63%), Postives = 75/152 (49.34%), Query Frame = 0
Query: 65 MSLSTSLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQE 124
+ S P +H+D++GP + + Y++SF D +KF W++P+ + + SI+
Sbjct: 656 LKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKFRWVYPLHDRRE-DSILDV 715
Query: 125 FN---PFIENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHK 184
F FI+NQ + V + D G E+ N +L F E GI+ + + + +AE
Sbjct: 716 FTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERL 775
Query: 185 HRPIVETTMSLIFHSSSPLEFWPYA--FSTVV 212
+R +++ + + S P W A FST+V
Sbjct: 776 NRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIV 806
BLAST of Cmc03g0069431 vs. ExPASy TrEMBL
Match:
A0A2I0W5D3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catenatum OX=906689 GN=MA16_Dca019118 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 4.1e-56
Identity = 111/231 (48.05%), Postives = 153/231 (66.23%), Query Frame = 0
Query: 2 HSKILNFHAKQKNSSLWHFRLGHLAPKILILILSRIGLSMSSSLSTCNCTSCLKAKMKNL 61
H+ A + +S++WH RLGH + + LI S + S+S+ C +C K +
Sbjct: 435 HTSQTALQASRSSSAVWHNRLGHPNQRTMRLIASAYP-QLHISISSFQCVACSSCKGHKM 494
Query: 62 PFPMSLSTSLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSI 121
PF S + TPLAL+HSDVWGPSP+ S+ G +YYV+FID+FS++TW+FP + KSDVP I
Sbjct: 495 PFSKSCNRMKTPLALLHSDVWGPSPVTSNQGFRYYVTFIDDFSRYTWIFPCSNKSDVPHI 554
Query: 122 VQEFNPFIENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHK 181
F FIENQ + K+K+ R DGG E+ N +L F GI HQ SCPYTP+QN +AE K
Sbjct: 555 FINFKTFIENQTNYKIKILRTDGGTEYRNITLSKFLSSNGIQHQLSCPYTPEQNGVAERK 614
Query: 182 HRPIVETTMSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
HR I+ETT +L+ +S PL+FWP A +T V+LINR+PS + + SPF+ F+
Sbjct: 615 HRHIIETTRTLLHQASVPLQFWPDAANTAVYLINRLPSSNTNNYSPFQSFY 664
BLAST of Cmc03g0069431 vs. ExPASy TrEMBL
Match:
A0A2I0VTJ1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catenatum OX=906689 GN=MA16_Dca014151 PE=4 SV=1)
HSP 1 Score: 223.8 bits (569), Expect = 7.8e-55
Identity = 111/224 (49.55%), Postives = 153/224 (68.30%), Query Frame = 0
Query: 10 AKQKNSSLWHFRLGHLAPKIL-ILILSRIGLSMSSSLSTCNCTSCLKAKMKNLPFPMSLS 69
A + +S +WH RLGH + + + ++ L++S S+S C SC K +PF S +
Sbjct: 443 ATRSSSDVWHNRLGHPNQRTMRYIAIANPQLNISCSIS--KCVSCSSCKGHKIPFTKSCN 502
Query: 70 TSLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEFNPF 129
TPLAL+HSDVWGPSP++S+ G +YYV+FID+FS++TW+FPI KSDVP I F F
Sbjct: 503 RMKTPLALLHSDVWGPSPVMSNQGFRYYVTFIDDFSRYTWIFPIRNKSDVPHIFINFKIF 562
Query: 130 IENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPIVET 189
IENQ K+K+ R DGG E+ NN+L FFE GI HQ SCPYTP+QN +AE KHR I+ET
Sbjct: 563 IENQTDYKIKMLRTDGGTEYRNNTLNHFFESNGIQHQFSCPYTPEQNGVAERKHRHIIET 622
Query: 190 TMSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
T +L+ +S P +FWP A +T V+LINR+PS + + SP++ +
Sbjct: 623 TRTLLHLASVPQQFWPDAANTAVYLINRLPSSNTNNRSPYQLLY 664
BLAST of Cmc03g0069431 vs. ExPASy TrEMBL
Match:
A0A2N9G7E3 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23257 PE=4 SV=1)
HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54
Identity = 112/220 (50.91%), Postives = 149/220 (67.73%), Query Frame = 0
Query: 14 NSSLWHFRLGHLAPKILILILSRIGLS-MSSSLSTCNCTSCLKAKMKNLPFPMSLSTSLT 73
+SS WH RLGH KIL + + S + SS S C C KM LPF S + +
Sbjct: 492 SSSTWHSRLGHPNSKILQSVFKHLPTSPIDSSSSNSFCKHCTLGKMSQLPFSHSCTHATE 551
Query: 74 PLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQEFNPFIENQ 133
PL LVHSDVWGP+PI S +G++YYVSFID+FSKFTW FP+ +KS V S F +EN
Sbjct: 552 PLQLVHSDVWGPAPITSINGTRYYVSFIDDFSKFTWFFPLKHKSQVLSTFVHFKSTLENL 611
Query: 134 LSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRPIVETTMSL 193
L+ K+KV R D G E+ +++ Q + +GI HQ SCP+TP+QN +AE KHR I+ET ++L
Sbjct: 612 LNYKLKVLRTDCGGEYTDSAFQHYCSSQGIFHQFSCPHTPQQNGVAERKHRHIIETALTL 671
Query: 194 IFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
I SS PL +WPYAF++ +FLINR+P++SLH+ SP+E F
Sbjct: 672 ISQSSLPLSYWPYAFASSIFLINRLPTVSLHLKSPWEVLF 711
BLAST of Cmc03g0069431 vs. ExPASy TrEMBL
Match:
A0A2N9GRJ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30097 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54
Identity = 108/228 (47.37%), Postives = 156/228 (68.42%), Query Frame = 0
Query: 8 FHAKQKNSSLWHFRLGHLAPKILILILSR---IGLSMSSSLSTCNCTSCLKAKMKNLPFP 67
F + S+WH RLGH +L +L++ + ++ + S C CT C++ K+ PFP
Sbjct: 521 FLGTKGTKSVWHSRLGHPQDCVLHSVLNKQPWLSVNTAKFSSDC-CTHCVQGKLHQFPFP 580
Query: 68 MSLSTSLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQE 127
S T+ PL LVHSDVWGP+P+ S +G+++YVSF+D+F++FTWLFPI +KS V + Q
Sbjct: 581 SSSFTATAPLELVHSDVWGPAPVTSINGTRFYVSFVDHFTRFTWLFPIKHKSQVLATFQH 640
Query: 128 FNPFIENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRP 187
F +EN L+ ++KV R D G E+ N++ +SF +GI HQ SCP+TP+QN +AE KHR
Sbjct: 641 FTATMENILNTRIKVLRTDCGGEYTNSAFESFCSTRGILHQFSCPHTPQQNGVAERKHRH 700
Query: 188 IVETTMSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
IVET ++LI SS PL++WPYAFST ++LINRMP+ +L SP++ F
Sbjct: 701 IVETALTLISESSLPLQYWPYAFSTAIYLINRMPTPNLKFTSPWQLLF 747
BLAST of Cmc03g0069431 vs. ExPASy TrEMBL
Match:
A0A2N9FMC6 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16294 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54
Identity = 108/228 (47.37%), Postives = 156/228 (68.42%), Query Frame = 0
Query: 8 FHAKQKNSSLWHFRLGHLAPKILILILSR---IGLSMSSSLSTCNCTSCLKAKMKNLPFP 67
F + S+WH RLGH +L +L++ + ++ + S C CT C++ K+ PFP
Sbjct: 348 FLGTKGTKSVWHSRLGHPQDCVLHSVLNKQPWLSVNTAKFSSDC-CTHCVQGKLHQFPFP 407
Query: 68 MSLSTSLTPLALVHSDVWGPSPIISSHGSQYYVSFIDNFSKFTWLFPIAYKSDVPSIVQE 127
S T+ PL LVHSDVWGP+P+ S +G+++YVSF+D+F++FTWLFPI +KS V + Q
Sbjct: 408 SSSFTATAPLELVHSDVWGPAPVTSINGTRFYVSFVDHFTRFTWLFPIKHKSQVLATFQH 467
Query: 128 FNPFIENQLSQKMKVFRFDGGDEFCNNSLQSFFEIKGISHQKSCPYTPKQNDIAEHKHRP 187
F +EN L+ ++KV R D G E+ N++ +SF +GI HQ SCP+TP+QN +AE KHR
Sbjct: 468 FTATMENILNTRIKVLRTDCGGEYTNSAFESFCSTRGILHQFSCPHTPQQNGVAERKHRH 527
Query: 188 IVETTMSLIFHSSSPLEFWPYAFSTVVFLINRMPSLSLHVLSPFEKFF 233
IVET ++LI SS PL++WPYAFST ++LINRMP+ +L SP++ F
Sbjct: 528 IVETALTLISESSLPLQYWPYAFSTAIYLINRMPTPNLKFTSPWQLLF 574
BLAST of Cmc03g0069431 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 43.1 bits (100), Expect = 3.6e-04
Identity = 23/67 (34.33%), Postives = 34/67 (50.75%), Query Frame = 0
Query: 17 LWHFRLGHLAPKILILILSRIGLSMSSSLSTCNCTSCLKAKMKNLPFPMSLSTSLTPLAL 76
LWH RL H++ + + L++ + L S S C C+ K + F T+ PL
Sbjct: 71 LWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDY 130
Query: 77 VHSDVWG 84
VHSD+WG
Sbjct: 131 VHSDLWG 137
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PKU70861.1 | 8.5e-56 | 48.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatu... | [more] |
PKU66732.1 | 1.6e-54 | 49.55 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatu... | [more] |
PKU85564.1 | 4.0e-53 | 52.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatu... | [more] |
PKU86178.1 | 4.0e-53 | 47.53 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatu... | [more] |
PKU68501.1 | 1.2e-52 | 50.00 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatu... | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 6.0e-44 | 43.12 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.0e-39 | 40.83 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 3.4e-31 | 34.10 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 3.6e-25 | 33.93 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q07163 | 2.3e-11 | 27.63 | Transposon TyH3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae OX=4932 GN=TY1B ... | [more] |
Match Name | E-value | Identity | Description | |
A0A2I0W5D3 | 4.1e-56 | 48.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catena... | [more] |
A0A2I0VTJ1 | 7.8e-55 | 49.55 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catena... | [more] |
A0A2N9G7E3 | 1.0e-54 | 50.91 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
A0A2N9GRJ0 | 2.3e-54 | 47.37 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30097 PE=4 SV=1 | [more] |
A0A2N9FMC6 | 2.3e-54 | 47.37 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00300.1 | 3.6e-04 | 34.33 | Gag-Pol-related retrotransposon family protein | [more] |