Cmc03g0067191 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0067191
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 9800341 .. 9800700 (-)
RNA-Seq Expression	Cmc03g0067191
Synteny	Cmc03g0067191

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTTGGATTAACAAATGCTCCAGTAGTGTTTATGGATTTGATGAACAGAGTGTTTAAGGATTTCTTAGACACTTTCGTTATTGTATTCATTGATGATATCTTGGTGTATTCCAAGGCAGAGGCAGAGCATGAGGAATATTTACACATGGTTCTAGAGACCCTACGAGCCAATAAACTATATGCAAAGTTTTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCTTTTCTAGGCCATATAGTTTCTAAAGATGATGTTTCTGTGGATCCAGCTAAGATAGAAGTTGTTACCAGTTGGCCTCGACCTTCTACAGTCAGTGAAGTTCATAGCTTTTTGGGTTTAGCAGGCTATTACTAA

mRNA sequence

ATGTCCTTTGGATTAACAAATGCTCCAGTAGTGTTTATGGATTTGATGAACAGAGTGTTTAAGGATTTCTTAGACACTTTCGTTATTGTATTCATTGATGATATCTTGGTGTATTCCAAGGCAGAGGCAGAGCATGAGGAATATTTACACATGGTTCTAGAGACCCTACGAGCCAATAAACTATATGCAAAGTTTTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCTTTTCTAGGCCATATAGTTTCTAAAGATGATGTTTCTGTGGATCCAGCTAAGATAGAAGTTGTTACCAGTTGGCCTCGACCTTCTACAGTCAGTGAAGTTCATAGCTTTTTGGGTTTAGCAGGCTATTACTAA

Coding sequence (CDS)

ATGTCCTTTGGATTAACAAATGCTCCAGTAGTGTTTATGGATTTGATGAACAGAGTGTTTAAGGATTTCTTAGACACTTTCGTTATTGTATTCATTGATGATATCTTGGTGTATTCCAAGGCAGAGGCAGAGCATGAGGAATATTTACACATGGTTCTAGAGACCCTACGAGCCAATAAACTATATGCAAAGTTTTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCTTTTCTAGGCCATATAGTTTCTAAAGATGATGTTTCTGTGGATCCAGCTAAGATAGAAGTTGTTACCAGTTGGCCTCGACCTTCTACAGTCAGTGAAGTTCATAGCTTTTTGGGTTTAGCAGGCTATTACTAA

Protein sequence

MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANKLYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY

Homology

[Close]

BLAST of Cmc03g0067191 vs. NCBI nr
Match: KAA0036879.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 106/119 (89.08%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1    MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
            MSFGLTNAPVVFMDLMNRVF++FLDTFVIVFIDDIL+YSK EAEHEEYL MVL+TLR NK
Sbjct: 911  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEYLRMVLQTLRDNK 970

Query: 61   LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
            LYAKFSKCEFWLKQVSFLGH+VSKD VSVDPAKIE VT W RPSTVSEV SFLGLAGYY
Sbjct: 971  LYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYY 1029

[Close]

BLAST of Cmc03g0067191 vs. NCBI nr
Match: KAA0033486.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 214.9 bits (546), Expect = 3.7e-52
Identity = 102/119 (85.71%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           MSFGLTNAP VFMDLMNRVFKDFLD+FVIVFIDDIL+YSK EAEHEE+LH VLETLRANK
Sbjct: 713 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           LYAKFSKCEFWL++V+FLGH+VS++ VSVDPAKIE VT+WPRPSTVSE+ SFLGLAGYY
Sbjct: 773 LYAKFSKCEFWLRKVTFLGHVVSREGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 831

[Close]

BLAST of Cmc03g0067191 vs. NCBI nr
Match: KAA0063098.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 6.3e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           MSFGLTNAP VFMDLMNRVFKDFLD+FVIVFIDDIL+YSK EAEHEE+LH VLETLRANK
Sbjct: 713 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           LYAKFSKCEFWL++V+FLGH+VS + VSVDPAKIE VT+WPRPSTVSE+ SFLGLAGYY
Sbjct: 773 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 831

[Close]

BLAST of Cmc03g0067191 vs. NCBI nr
Match: KAA0051719.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 6.3e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           MSFGLTNAP VFMDLMNRVFKDFLD+FVIVFIDDIL+YSK EAEHEE+LH VLETLRANK
Sbjct: 673 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 732

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           LYAKFSKCEFWL++V+FLGH+VS + VSVDPAKIE VT+WPRPSTVSE+ SFLGLAGYY
Sbjct: 733 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 791

[Close]

BLAST of Cmc03g0067191 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 6.3e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           MSFGLTNAP VFMDLMNRVFKDFLD+FVIVFIDDIL+YSK EAEHEE+LH VLETLRANK
Sbjct: 251 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           LYAKFSKCEFWL++V+FLGH+VS + VSVDPAKIE VT+WPRPSTVSE+ SFLGLAGYY
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 369

[Close]

BLAST of Cmc03g0067191 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-20
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           M FGL NAP  F   MN + +  L+   +V++DDI+++S +  EH   + +V   L    
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           L  +  KCEF  K+ +FLGHIV+ D +  +P K++ + S+P P+   E+ +FLGL GYY
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYY 451

[Close]

BLAST of Cmc03g0067191 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.3e-20
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           M FGL NAP  F   MN + +  L+   +V++DDI+V+S +  EH + L +V E L    
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           L  +  KCEF  ++ +FLGH+++ D +  +P KIE +  +P P+   E+ +FLGL GYY
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

[Close]

BLAST of Cmc03g0067191 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.9e-17
Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           + FGL NAP +F  +++ + ++ +     V+IDDI+V+S+    H + L +VL +L    
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           L     K  F   QV FLG+IV+ D +  DP K+  ++  P P++V E+  FLG+  YY
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYY 368

[Close]

BLAST of Cmc03g0067191 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-15
Identity = 44/119 (36.97%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           M FGL NAP  F   M   F+D    FV V++DDIL++S++  EH ++L  VLE L+   
Sbjct: 718 MPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNEN 777

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           L  K  KC+F  ++  FLG+ +    ++    K   +  +P P TV +   FLG+  YY
Sbjct: 778 LIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYY 834

[Close]

BLAST of Cmc03g0067191 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-15
Identity = 44/119 (36.97%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           M FGL NAP  F   M   F+D    FV V++DDIL++S++  EH ++L  VLE L+   
Sbjct: 744 MPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNEN 803

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           L  K  KC+F  ++  FLG+ +    ++    K   +  +P P TV +   FLG+  YY
Sbjct: 804 LIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYY 860

[Close]

BLAST of Cmc03g0067191 vs. ExPASy TrEMBL
Match: A0A5A7T673 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001950 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.0e-53
Identity = 106/119 (89.08%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1    MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
            MSFGLTNAPVVFMDLMNRVF++FLDTFVIVFIDDIL+YSK EAEHEEYL MVL+TLR NK
Sbjct: 911  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEYLRMVLQTLRDNK 970

Query: 61   LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
            LYAKFSKCEFWLKQVSFLGH+VSKD VSVDPAKIE VT W RPSTVSEV SFLGLAGYY
Sbjct: 971  LYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYY 1029

[Close]

BLAST of Cmc03g0067191 vs. ExPASy TrEMBL
Match: A0A5A7SU25 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00200 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 102/119 (85.71%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           MSFGLTNAP VFMDLMNRVFKDFLD+FVIVFIDDIL+YSK EAEHEE+LH VLETLRANK
Sbjct: 713 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           LYAKFSKCEFWL++V+FLGH+VS++ VSVDPAKIE VT+WPRPSTVSE+ SFLGLAGYY
Sbjct: 773 LYAKFSKCEFWLRKVTFLGHVVSREGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 831

[Close]

BLAST of Cmc03g0067191 vs. ExPASy TrEMBL
Match: A0A5A7UE01 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001050 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           MSFGLTNAP VFMDLMNRVFKDFLD+FVIVFIDDIL+YSK EAEHEE+LH VLETLRANK
Sbjct: 673 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 732

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           LYAKFSKCEFWL++V+FLGH+VS + VSVDPAKIE VT+WPRPSTVSE+ SFLGLAGYY
Sbjct: 733 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 791

[Close]

BLAST of Cmc03g0067191 vs. ExPASy TrEMBL
Match: A0A5A7VBY3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00920 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1    MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
            MSFGLTNAP VFMDLMNRVFKDFLD+FVIVFIDDIL+YSK EAEHEE+LH VLETLRANK
Sbjct: 939  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 998

Query: 61   LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
            LYAKFSKCEFWL++V+FLGH+VS + VSVDPAKIE VT+WPRPSTVSE+ SFLGLAGYY
Sbjct: 999  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 1057

[Close]

BLAST of Cmc03g0067191 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MSFGLTNAPVVFMDLMNRVFKDFLDTFVIVFIDDILVYSKAEAEHEEYLHMVLETLRANK 60
           MSFGLTNAP VFMDLMNRVFKDFLD+FVIVFIDDIL+YSK EAEHEE+LH VLETLRANK
Sbjct: 251 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 61  LYAKFSKCEFWLKQVSFLGHIVSKDDVSVDPAKIEVVTSWPRPSTVSEVHSFLGLAGYY 120
           LYAKFSKCEFWL++V+FLGH+VS + VSVDPAKIE VT+WPRPSTVSE+ SFLGLAGYY
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 369

[Close]

BLAST of Cmc03g0067191 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-13
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 48  YLHMVLETLRANKLYAKFSKCEFWLKQVSFLG--HIVSKDDVSVDPAKIEVVTSWPRPST 107
           +L MVL+    ++ YA   KC F   Q+++LG  HI+S + VS DPAK+E +  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VSEVHSFLGLAGYY 120
            +E+  FLGL GYY
Sbjct: 63  TTELRGFLGLTGYY 76

The following BLAST results are available for this feature:

BLAST of Cmc03g0067191 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036879.1	1.7e-52	89.08	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0033486.1	3.7e-52	85.71	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0063098.1	6.3e-52	85.71	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051719.1	6.3e-52	85.71	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	6.3e-52	85.71	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0067191 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.3e-20	38.66	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.3e-20	39.50	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	8.9e-17	35.29	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	2.9e-15	36.97	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.9e-15	36.97	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc03g0067191 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T673	8.0e-53	89.08	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7SU25	1.8e-52	85.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7UE01	3.1e-52	85.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60...	[more]
A0A5A7VBY3	3.1e-52	85.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61...	[more]
A0A5A7V6R2	3.1e-52	85.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]

BLAST of Cmc03g0067191 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.8e-13	44.59	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..81 e-value: 6.9E-16 score: 58.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..82 score: 9.675078
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 92..119 e-value: 1.7E-6 score: 30.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..88 e-value: 6.6E-32 score: 112.2
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 17..119
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 17..119
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 1.84926E-35 score: 117.696
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0067191.1	Cmc03g0067191.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding