Cmc03g0065671 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0065671
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pol protein
Location	CMiso1.1chr03: 7150194 .. 7151263 (+)
RNA-Seq Expression	Cmc03g0065671
Synteny	Cmc03g0065671

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCCGGGTAGTACGAAGATGTATCAGGATCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCGGGTTAAGGCACCAAGGCAAAAGCCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCATGGAGTGCCGGTGTCGATCGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCGACAAACTGACGGTCAAACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGACACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCAGTTTGCTGGGGTGAGGTGGGTTGGCAGAGATTGATGGGCCCTGAGTTAGTTCAGTCTACCAACGAAGCGATACAGAAGATTAGATCACGTATGCATACCGCTCAGAGTAGACAGAATAGTTATGCAGATGTGAGGCGGAAGGATCTTGAATTTGAGGTAGGGGACAAGGTGTTCTTAAAAGTAGCACCTATGAGAGGTGTTTTACGATTTAAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCGCTCTCGACAGTTCACGATGTGTTTCATGTCTCTATGTTGAGGAAGTACGTGCTGGATGTGTTTCATGACACTTCATCCCATGTAGTGGATCACGAGCCACTGGAGATTGA

mRNA sequence

ATGCACCCGGGTAGTACGAAGATGTATCAGGATCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCGGGTTAAGGCACCAAGGCAAAAGCCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCATGGAGTGCCGGTGTCGATCGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCGACAAACTGACGGTCAAACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGACACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCAGTTTGCTGGGGTGAGGTGGGTTGGCAGAGATTGATGGGCCCTGAGTTAGTTCAGTCTACCAACGAAGCGATACAGAAGATTAGATCACGTATGCATACCGCTCAGAGTAGACAGAATAGTTATGCAGATGTGAGGCGGAAGGATCTTGAATTTGAGGTAGGGGACAAGGTGTTCTTAAAAGTAGCACCTATGAGAGGTGTTTTACGATTTAAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCGCTCTCGACAGTTCACGATGTGTTTCATGTCTCTATGTTGAGGAATGGATCACGAGCCACTGGAGATTGA

Coding sequence (CDS)

ATGCACCCGGGTAGTACGAAGATGTATCAGGATCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCGGGTTAAGGCACCAAGGCAAAAGCCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCATGGAGTGCCGGTGTCGATCGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCGACAAACTGACGGTCAAACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGACACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCAGTTTGCTGGGGTGAGGTGGGTTGGCAGAGATTGATGGGCCCTGAGTTAGTTCAGTCTACCAACGAAGCGATACAGAAGATTAGATCACGTATGCATACCGCTCAGAGTAGACAGAATAGTTATGCAGATGTGAGGCGGAAGGATCTTGAATTTGAGGTAGGGGACAAGGTGTTCTTAAAAGTAGCACCTATGAGAGGTGTTTTACGATTTAAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCGCTCTCGACAGTTCACGATGTGTTTCATGTCTCTATGTTGAGGAATGGATCACGAGCCACTGGAGATTGA

Protein sequence

MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNEAIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRNGSRATGD

Homology

[Close]

BLAST of Cmc03g0065671 vs. NCBI nr
Match: KAA0064005.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.6 bits (1742), Expect = 2.2e-190
Identity = 324/334 (97.01%), Postives = 330/334 (98.80%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 209 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 268

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 269 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 328

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 329 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 388

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGMTPFEALYG+CCRSPVCWGEVG QRLMGPELVQSTNE
Sbjct: 389 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 448

Query: 241 AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQ SYADVRRKDLEFE+GDKVFLKVAPM+GVLRF+RRGKLSPRFVG
Sbjct: 449 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 508

Query: 301 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
           PFEILERIGPVAYRLALPPSLS VHDVFHVSMLR
Sbjct: 509 PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLR 542

[Close]

BLAST of Cmc03g0065671 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.6 bits (1742), Expect = 2.2e-190
Identity = 324/334 (97.01%), Postives = 330/334 (98.80%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            MHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 1039 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1098

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 1099 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1158

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
            VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1159 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1218

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
            GSWDSHLHLMEFAYNNSYQATIGM PFEALYG+CCRSPVCWGEVG QRLMGPELVQSTNE
Sbjct: 1219 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1278

Query: 241  AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
            AIQKIRSRMHTAQSRQ SYADVRRKDLEFE+GDKVFLKVAPM+GVLRF+RRGKLSPRFVG
Sbjct: 1279 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 1338

Query: 301  PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
            PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR
Sbjct: 1339 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 1372

[Close]

BLAST of Cmc03g0065671 vs. NCBI nr
Match: KAA0066456.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.5 bits (1739), Expect = 4.9e-190
Identity = 324/334 (97.01%), Postives = 330/334 (98.80%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            MHPGSTK+YQDLKRVYWWRNMKREVAEFVS+CLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 1089 MHPGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1148

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 1149 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1208

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
            VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1209 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1268

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
            GSWDSHLHLMEFAYNNSYQATIGM PFEALYG+CCRSPVCWGEVG QRLMGPELVQSTNE
Sbjct: 1269 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1328

Query: 241  AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
            AIQKIRSRMHTAQSRQ SYADVRRKDLEFEVGDKVFLKVAPMRGV+RF+RRGKLSPRFVG
Sbjct: 1329 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVG 1388

Query: 301  PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
            PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR
Sbjct: 1389 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 1422

[Close]

BLAST of Cmc03g0065671 vs. NCBI nr
Match: KAA0047043.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.1 bits (1738), Expect = 6.4e-190
Identity = 326/334 (97.60%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 203 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVG QRLMGPELVQS NE
Sbjct: 323 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSINE 382

Query: 241 AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQ SYADVRR DLEFEVGDKVFLKVAPMRGVLRF+RRGKLSPRFVG
Sbjct: 383 AIQKIRSRMHTAQSRQKSYADVRRIDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 442

Query: 301 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
           PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR
Sbjct: 443 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 476

[Close]

BLAST of Cmc03g0065671 vs. NCBI nr
Match: KAA0025425.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 672.5 bits (1734), Expect = 1.9e-189
Identity = 325/334 (97.31%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 78  MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 137

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 138 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 197

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 198 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 257

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVG QRLMG ELVQSTNE
Sbjct: 258 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGLELVQSTNE 317

Query: 241 AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQ SYADVRR DLEFEVGDKVFLKVAPMRGVLRF+RRGKLSPRFVG
Sbjct: 318 AIQKIRSRMHTAQSRQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 377

Query: 301 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
           PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR
Sbjct: 378 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 411

[Close]

BLAST of Cmc03g0065671 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.2e-51
Identity = 116/336 (34.52%), Postives = 181/336 (53.87%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGWQRLMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQNSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFKRRGKLSPRF 300
            +  Q ++  ++T   +   Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSML 334
             GPF +L++ GP  Y L LP S+  +    FHVS L
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc03g0065671 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.2e-51
Identity = 116/336 (34.52%), Postives = 181/336 (53.87%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGWQRLMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQNSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFKRRGKLSPRF 300
            +  Q ++  ++T   +   Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSML 334
             GPF +L++ GP  Y L LP S+  +    FHVS L
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc03g0065671 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.2e-51
Identity = 116/336 (34.52%), Postives = 181/336 (53.87%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGWQRLMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQNSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFKRRGKLSPRF 300
            +  Q ++  ++T   +   Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSML 334
             GPF +L++ GP  Y L LP S+  +    FHVS L
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc03g0065671 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.2e-51
Identity = 116/336 (34.52%), Postives = 181/336 (53.87%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGWQRLMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQNSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFKRRGKLSPRF 300
            +  Q ++  ++T   +   Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSML 334
             GPF +L++ GP  Y L LP S+  +    FHVS L
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc03g0065671 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.2e-51
Identity = 116/336 (34.52%), Postives = 181/336 (53.87%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGWQRLMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQNSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFKRRGKLSPRF 300
            +  Q ++  ++T   +   Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSML 334
             GPF +L++ GP  Y L LP S+  +    FHVS L
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc03g0065671 vs. ExPASy TrEMBL
Match: A0A5A7VDP3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1536G00010 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.1e-190
Identity = 324/334 (97.01%), Postives = 330/334 (98.80%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 209 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 268

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 269 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 328

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 329 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 388

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGMTPFEALYG+CCRSPVCWGEVG QRLMGPELVQSTNE
Sbjct: 389 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 448

Query: 241 AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQ SYADVRRKDLEFE+GDKVFLKVAPM+GVLRF+RRGKLSPRFVG
Sbjct: 449 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 508

Query: 301 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
           PFEILERIGPVAYRLALPPSLS VHDVFHVSMLR
Sbjct: 509 PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLR 542

[Close]

BLAST of Cmc03g0065671 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.1e-190
Identity = 324/334 (97.01%), Postives = 330/334 (98.80%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            MHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 1039 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1098

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 1099 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1158

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
            VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1159 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1218

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
            GSWDSHLHLMEFAYNNSYQATIGM PFEALYG+CCRSPVCWGEVG QRLMGPELVQSTNE
Sbjct: 1219 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1278

Query: 241  AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
            AIQKIRSRMHTAQSRQ SYADVRRKDLEFE+GDKVFLKVAPM+GVLRF+RRGKLSPRFVG
Sbjct: 1279 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 1338

Query: 301  PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
            PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR
Sbjct: 1339 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 1372

[Close]

BLAST of Cmc03g0065671 vs. ExPASy TrEMBL
Match: A0A5A7VJE2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005560 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.4e-190
Identity = 324/334 (97.01%), Postives = 330/334 (98.80%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
            MHPGSTK+YQDLKRVYWWRNMKREVAEFVS+CLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 1089 MHPGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1148

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
            NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 1149 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1208

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
            VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1209 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1268

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
            GSWDSHLHLMEFAYNNSYQATIGM PFEALYG+CCRSPVCWGEVG QRLMGPELVQSTNE
Sbjct: 1269 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1328

Query: 241  AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
            AIQKIRSRMHTAQSRQ SYADVRRKDLEFEVGDKVFLKVAPMRGV+RF+RRGKLSPRFVG
Sbjct: 1329 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVG 1388

Query: 301  PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
            PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR
Sbjct: 1389 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 1422

[Close]

BLAST of Cmc03g0065671 vs. ExPASy TrEMBL
Match: A0A5A7TU00 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.1e-190
Identity = 326/334 (97.60%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 203 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVG QRLMGPELVQS NE
Sbjct: 323 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSINE 382

Query: 241 AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQ SYADVRR DLEFEVGDKVFLKVAPMRGVLRF+RRGKLSPRFVG
Sbjct: 383 AIQKIRSRMHTAQSRQKSYADVRRIDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 442

Query: 301 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
           PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR
Sbjct: 443 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 476

[Close]

BLAST of Cmc03g0065671 vs. ExPASy TrEMBL
Match: A0A5A7SLT0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00090 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 9.0e-190
Identity = 325/334 (97.31%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQRVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ+VKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 78  MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 137

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
Sbjct: 138 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 197

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHRQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFP
Sbjct: 198 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 257

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGWQRLMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVG QRLMG ELVQSTNE
Sbjct: 258 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGLELVQSTNE 317

Query: 241 AIQKIRSRMHTAQSRQNSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFKRRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQ SYADVRR DLEFEVGDKVFLKVAPMRGVLRF+RRGKLSPRFVG
Sbjct: 318 AIQKIRSRMHTAQSRQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 377

Query: 301 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 335
           PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR
Sbjct: 378 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 411

The following BLAST results are available for this feature:

BLAST of Cmc03g0065671 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064005.1	2.2e-190	97.01	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051368.1	2.2e-190	97.01	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066456.1	4.9e-190	97.01	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047043.1	6.4e-190	97.60	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025425.1	1.9e-189	97.31	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0065671 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	7.2e-51	34.52	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	7.2e-51	34.52	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	7.2e-51	34.52	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	7.2e-51	34.52	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	7.2e-51	34.52	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0065671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDP3	1.1e-190	97.01	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1536G00010 P...	[more]
A0A5A7U7V9	1.1e-190	97.01	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7VJE2	2.4e-190	97.01	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7TU00	3.1e-190	97.60	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE...	[more]
A0A5A7SLT0	9.0e-190	97.31	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00090 PE...	[more]

BLAST of Cmc03g0065671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 1..39 e-value: 2.0E-11 score: 46.0
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 1..209
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 2..40 e-value: 1.3E-13 score: 50.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 48..257 e-value: 1.5E-46 score: 160.2
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 51..214 score: 18.116642
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 52..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0065671.1	Cmc03g0065671.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding