Cmc03g0065431 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0065431
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 6740109 .. 6741848 (-)
RNA-Seq Expression	Cmc03g0065431
Synteny	Cmc03g0065431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCCTTTGTATAGACTACCGAGAGCTGAATAAGGTGACAGTGAAAAACCGCTACCCCTTGCCCTGGATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGGCATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGATTTTCTAGACCTGTTCGTCATAGTCTTCATTGATGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACATGCACCAGGTTTTGGAGACAATTCGTGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTATGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGATCCCGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAGGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAATCCCGTTTGTCTGGAGCCCAGCATGCGAGAGCAGCTTTCAGGAGCTCAAGCAGAACCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCTCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAATGATCCTTACTTGGCCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACTTTGTCAGCAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGTGTCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAATGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGCAGTTATATATGA

mRNA sequence

ATGCGCCTTTGTATAGACTACCGAGAGCTGAATAAGGTGACAGTGAAAAACCGCTACCCCTTGCCCTGGATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGGCATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGATTTTCTAGACCTGTTCGTCATAGTCTTCATTGATGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACATGCACCAGGTTTTGGAGACAATTCGTGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTATGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGATCCCGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAGGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAATCCCGTTTGTCTGGAGCCCAGCATGCGAGAGCAGCTTTCAGGAGCTCAAGCAGAACCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCTCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAATGATCCTTACTTGGCCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACTTTGTCAGCAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGTGTCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAATGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGCAGTTATATATGA

Coding sequence (CDS)

ATGCGCCTTTGTATAGACTACCGAGAGCTGAATAAGGTGACAGTGAAAAACCGCTACCCCTTGCCCTGGATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGGCATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGATTTTCTAGACCTGTTCGTCATAGTCTTCATTGATGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACATGCACCAGGTTTTGGAGACAATTCGTGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTATGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGATCCCGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAGGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAATCCCGTTTGTCTGGAGCCCAGCATGCGAGAGCAGCTTTCAGGAGCTCAAGCAGAACCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCTCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAATGATCCTTACTTGGCCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACTTTGTCAGCAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGTGTCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAATGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGCAGTTATATATGA

Protein sequence

MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHMHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGSYI

Homology

[Close]

BLAST of Cmc03g0065431 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 563/576 (97.74%), Postives = 566/576 (98.26%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 613  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 672

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 673  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 732

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE
Sbjct: 733  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 792

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            IRSFLGLAGYYRRFVEDFSRIASPLTQLT+KG PFVWSPACESSFQELKQ LV APVLTV
Sbjct: 793  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTV 852

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
            PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 853  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 912

Query: 301  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 913  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 972

Query: 361  RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
            RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA
Sbjct: 973  RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 1032

Query: 421  EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
            EKRRMVETGQGE FSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSS FTMHPGSTKMYQ
Sbjct: 1033 EKRRMVETGQGEDFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQ 1092

Query: 481  DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
            DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL
Sbjct: 1093 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 1152

Query: 541  PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
            PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 1153 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 1188

[Close]

BLAST of Cmc03g0065431 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1138.6 bits (2944), Expect = 0.0e+00
Identity = 561/576 (97.40%), Postives = 566/576 (98.26%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
           MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 179 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 238

Query: 61  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFVV+SFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 239 FRSRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 298

Query: 121 MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
           +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE
Sbjct: 299 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 358

Query: 181 IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
           IRSFLGLAGYYRRFVED SRIASPLTQLT+KG PFVWSPACE SFQELKQ LVTAPVLTV
Sbjct: 359 IRSFLGLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTV 418

Query: 241 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
           PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 419 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 478

Query: 301 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
           RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD+LS
Sbjct: 479 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLS 538

Query: 361 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
           RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA
Sbjct: 539 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 598

Query: 421 EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
           EKRRMVETGQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ
Sbjct: 599 EKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 658

Query: 481 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
           DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGL
Sbjct: 659 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 718

Query: 541 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
           PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 719 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 754

[Close]

BLAST of Cmc03g0065431 vs. NCBI nr
Match: KAA0056636.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 560/576 (97.22%), Postives = 564/576 (97.92%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
           MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60

Query: 61  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 61  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120

Query: 121 MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
           +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAK EAVTNWPRPSTVSE
Sbjct: 121 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKTEAVTNWPRPSTVSE 180

Query: 181 IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
           IRSFLGLAGYYRRFVEDFSRIASPLTQLT+KG PFVWSPACESSFQ+LKQ LVTAPVLTV
Sbjct: 181 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQKLKQKLVTAPVLTV 240

Query: 241 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
           PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 241 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 300

Query: 301 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
           RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALS
Sbjct: 301 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALS 360

Query: 361 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
           RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQ SVQPTLRQKIIA QLNDPYLA
Sbjct: 361 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQFSVQPTLRQKIIATQLNDPYLA 420

Query: 421 EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
           EKRRMVETGQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ
Sbjct: 421 EKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480

Query: 481 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
           DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCP GLLQPLSVPGWKWESVSMDFITGL
Sbjct: 481 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPVGLLQPLSVPGWKWESVSMDFITGL 540

Query: 541 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
           PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 541 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 576

[Close]

BLAST of Cmc03g0065431 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1134.4 bits (2933), Expect = 0.0e+00
Identity = 559/576 (97.05%), Postives = 566/576 (98.26%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 977  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 1036

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 1037 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 1096

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSE
Sbjct: 1097 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSE 1156

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            IRSFLGLAGYYRRFVEDFSRIASPLTQLT+KG PFVWSPACE SFQELKQ LVTAPVLTV
Sbjct: 1157 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTV 1216

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
            PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 1217 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 1276

Query: 301  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 1277 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1336

Query: 361  RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
            RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLA
Sbjct: 1337 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLA 1396

Query: 421  EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
            EKRR+VET QGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ
Sbjct: 1397 EKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 1456

Query: 481  DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
            DLRSVYWWRGMKR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGL
Sbjct: 1457 DLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 1516

Query: 541  PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
            PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 1517 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 1552

[Close]

BLAST of Cmc03g0065431 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1134.4 bits (2933), Expect = 0.0e+00
Identity = 559/576 (97.05%), Postives = 566/576 (98.26%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 641  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 700

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 701  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 760

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSE
Sbjct: 761  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSE 820

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            IRSFLGLAGYYRRFVEDFSRIASPLTQLT+KG PFVWSPACE SFQELKQ LVTAPVLTV
Sbjct: 821  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTV 880

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
            PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 881  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 940

Query: 301  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 941  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1000

Query: 361  RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
            RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLA
Sbjct: 1001 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLA 1060

Query: 421  EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
            EKRR+VET QGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ
Sbjct: 1061 EKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 1120

Query: 481  DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
            DLRSVYWWRGMKR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGL
Sbjct: 1121 DLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 1180

Query: 541  PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
            PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 1181 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 1216

[Close]

BLAST of Cmc03g0065431 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.4e-94
Identity = 199/589 (33.79%), Postives = 322/589 (54.67%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +  VL+ ++   L    +KCE    +V F+G+ +S +G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            +R FLG   Y R+F+   S++  PL  L KK + + W+P    + + +KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASLQLKIHEQNYPTHDLELAAVVF 300
             D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIA 420
            AN +ADALSR       ++ +  P+ +D E   I          + Q+S+    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQLNDPYLA-----EKRRMVETGQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAH 480
               ND  L      E +R+ E  Q  +G  I+S D      ++ +P D+ +   ++ + H
Sbjct: 882  EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYH 941

Query: 481  SSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVP 540
                 +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+   
Sbjct: 942  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 1001

Query: 541  GWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASK 575
               WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +
Sbjct: 1002 ERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQ 1028

[Close]

BLAST of Cmc03g0065431 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.4e-94
Identity = 199/589 (33.79%), Postives = 322/589 (54.67%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +  VL+ ++   L    +KCE    +V F+G+ +S +G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            +R FLG   Y R+F+   S++  PL  L KK + + W+P    + + +KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASLQLKIHEQNYPTHDLELAAVVF 300
             D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIA 420
            AN +ADALSR       ++ +  P+ +D E   I          + Q+S+    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQLNDPYLA-----EKRRMVETGQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAH 480
               ND  L      E +R+ E  Q  +G  I+S D      ++ +P D+ +   ++ + H
Sbjct: 882  EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYH 941

Query: 481  SSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVP 540
                 +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+   
Sbjct: 942  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 1001

Query: 541  GWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASK 575
               WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +
Sbjct: 1002 ERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQ 1028

[Close]

BLAST of Cmc03g0065431 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.4e-94
Identity = 199/589 (33.79%), Postives = 322/589 (54.67%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +  VL+ ++   L    +KCE    +V F+G+ +S +G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            +R FLG   Y R+F+   S++  PL  L KK + + W+P    + + +KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASLQLKIHEQNYPTHDLELAAVVF 300
             D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIA 420
            AN +ADALSR       ++ +  P+ +D E   I          + Q+S+    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQLNDPYLA-----EKRRMVETGQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAH 480
               ND  L      E +R+ E  Q  +G  I+S D      ++ +P D+ +   ++ + H
Sbjct: 882  EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYH 941

Query: 481  SSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVP 540
                 +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+   
Sbjct: 942  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 1001

Query: 541  GWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASK 575
               WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +
Sbjct: 1002 ERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQ 1028

[Close]

BLAST of Cmc03g0065431 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.4e-94
Identity = 199/589 (33.79%), Postives = 322/589 (54.67%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +  VL+ ++   L    +KCE    +V F+G+ +S +G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            +R FLG   Y R+F+   S++  PL  L KK + + W+P    + + +KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASLQLKIHEQNYPTHDLELAAVVF 300
             D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIA 420
            AN +ADALSR       ++ +  P+ +D E   I          + Q+S+    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQLNDPYLA-----EKRRMVETGQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAH 480
               ND  L      E +R+ E  Q  +G  I+S D      ++ +P D+ +   ++ + H
Sbjct: 882  EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYH 941

Query: 481  SSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVP 540
                 +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+   
Sbjct: 942  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 1001

Query: 541  GWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASK 575
               WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +
Sbjct: 1002 ERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQ 1028

[Close]

BLAST of Cmc03g0065431 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.4e-94
Identity = 199/589 (33.79%), Postives = 322/589 (54.67%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +  VL+ ++   L    +KCE    +V F+G+ +S +G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            +R FLG   Y R+F+   S++  PL  L KK + + W+P    + + +KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASLQLKIHEQNYPTHDLELAAVVF 300
             D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIA 420
            AN +ADALSR       ++ +  P+ +D E   I          + Q+S+    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQLNDPYLA-----EKRRMVETGQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAH 480
               ND  L      E +R+ E  Q  +G  I+S D      ++ +P D+ +   ++ + H
Sbjct: 882  EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYH 941

Query: 481  SSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVP 540
                 +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+   
Sbjct: 942  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 1001

Query: 541  GWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASK 575
               WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +
Sbjct: 1002 ERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQ 1028

[Close]

BLAST of Cmc03g0065431 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 563/576 (97.74%), Postives = 566/576 (98.26%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 613  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 672

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 673  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 732

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE
Sbjct: 733  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 792

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            IRSFLGLAGYYRRFVEDFSRIASPLTQLT+KG PFVWSPACESSFQELKQ LV APVLTV
Sbjct: 793  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTV 852

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
            PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 853  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 912

Query: 301  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 913  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 972

Query: 361  RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
            RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA
Sbjct: 973  RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 1032

Query: 421  EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
            EKRRMVETGQGE FSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSS FTMHPGSTKMYQ
Sbjct: 1033 EKRRMVETGQGEDFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQ 1092

Query: 481  DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
            DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL
Sbjct: 1093 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 1152

Query: 541  PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
            PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 1153 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 1188

[Close]

BLAST of Cmc03g0065431 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 1138.6 bits (2944), Expect = 0.0e+00
Identity = 561/576 (97.40%), Postives = 566/576 (98.26%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
           MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 179 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 238

Query: 61  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFVV+SFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 239 FRSRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 298

Query: 121 MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
           +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE
Sbjct: 299 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 358

Query: 181 IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
           IRSFLGLAGYYRRFVED SRIASPLTQLT+KG PFVWSPACE SFQELKQ LVTAPVLTV
Sbjct: 359 IRSFLGLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTV 418

Query: 241 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
           PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 419 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 478

Query: 301 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
           RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD+LS
Sbjct: 479 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLS 538

Query: 361 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
           RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA
Sbjct: 539 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 598

Query: 421 EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
           EKRRMVETGQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ
Sbjct: 599 EKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 658

Query: 481 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
           DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGL
Sbjct: 659 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 718

Query: 541 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
           PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 719 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 754

[Close]

BLAST of Cmc03g0065431 vs. ExPASy TrEMBL
Match: A0A5A7UQP9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001570 PE=4 SV=1)

HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 560/576 (97.22%), Postives = 564/576 (97.92%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
           MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60

Query: 61  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 61  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120

Query: 121 MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
           +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAK EAVTNWPRPSTVSE
Sbjct: 121 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKTEAVTNWPRPSTVSE 180

Query: 181 IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
           IRSFLGLAGYYRRFVEDFSRIASPLTQLT+KG PFVWSPACESSFQ+LKQ LVTAPVLTV
Sbjct: 181 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQKLKQKLVTAPVLTV 240

Query: 241 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
           PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 241 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 300

Query: 301 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
           RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALS
Sbjct: 301 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALS 360

Query: 361 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
           RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQ SVQPTLRQKIIA QLNDPYLA
Sbjct: 361 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQFSVQPTLRQKIIATQLNDPYLA 420

Query: 421 EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
           EKRRMVETGQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ
Sbjct: 421 EKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480

Query: 481 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
           DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCP GLLQPLSVPGWKWESVSMDFITGL
Sbjct: 481 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPVGLLQPLSVPGWKWESVSMDFITGL 540

Query: 541 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
           PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 541 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 576

[Close]

BLAST of Cmc03g0065431 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 1134.4 bits (2933), Expect = 0.0e+00
Identity = 559/576 (97.05%), Postives = 566/576 (98.26%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 978  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 1037

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 1038 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 1097

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSE
Sbjct: 1098 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSE 1157

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            IRSFLGLAGYYRRFVEDFSRIASPLTQLT+KG PFVWSPACE SFQELKQ LVTAPVLTV
Sbjct: 1158 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTV 1217

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
            PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 1218 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 1277

Query: 301  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 1278 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1337

Query: 361  RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
            RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLA
Sbjct: 1338 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLA 1397

Query: 421  EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
            EKRR+VET QGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ
Sbjct: 1398 EKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 1457

Query: 481  DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
            DLRSVYWWRGMKR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGL
Sbjct: 1458 DLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 1517

Query: 541  PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
            PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 1518 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 1553

[Close]

BLAST of Cmc03g0065431 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 1134.4 bits (2933), Expect = 0.0e+00
Identity = 559/576 (97.05%), Postives = 566/576 (98.26%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 60
            MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA
Sbjct: 641  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 700

Query: 61   FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEH
Sbjct: 701  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 760

Query: 121  MHQVLETIRANKLYAKFSKCELWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 180
            +HQVLET+RANKLYAKFSKCE WLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSE
Sbjct: 761  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSE 820

Query: 181  IRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPVLTV 240
            IRSFLGLAGYYRRFVEDFSRIASPLTQLT+KG PFVWSPACE SFQELKQ LVTAPVLTV
Sbjct: 821  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTV 880

Query: 241  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASLQLKIHEQNYPTHDLELAAVVFALKIW 300
            PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLKIHEQNYPTHDLELAAVVFALKIW
Sbjct: 881  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 940

Query: 301  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 941  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1000

Query: 361  RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 420
            RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLA
Sbjct: 1001 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLA 1060

Query: 421  EKRRMVETGQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 480
            EKRR+VET QGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ
Sbjct: 1061 EKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 1120

Query: 481  DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGL 540
            DLRSVYWWRGMKR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGL
Sbjct: 1121 DLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 1180

Query: 541  PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 577
            PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG
Sbjct: 1181 PKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG 1216

[Close]

BLAST of Cmc03g0065431 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 8.1e-26
Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 120 HMHQVLETIRANKLYAKFSKCELWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPST 179
           H+  VL+    ++ YA   KC     ++ +LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 180 VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGIPFVWSPACESSFQELKQNLVTAPV 239
            +E+R FLGL GYYRRFV+++ +I  PLT+L KK     W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 240 LTVPD 243
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc03g0065431 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060745.1	0.0e+00	97.74	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	0.0e+00	97.40	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056636.1	0.0e+00	97.22	pol protein [Cucumis melo var. makuwa]	[more]
TYK20443.1	0.0e+00	97.05	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025998.1	0.0e+00	97.05	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0065431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.4e-94	33.79	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.4e-94	33.79	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.4e-94	33.79	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.4e-94	33.79	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.4e-94	33.79	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0065431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4E4	0.0e+00	97.74	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7TVN9	0.0e+00	97.40	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7UQP9	0.0e+00	97.22	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001570 P...	[more]
A0A5D3BTN0	0.0e+00	97.05	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7SIJ5	0.0e+00	97.05	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]

BLAST of Cmc03g0065431 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.1e-26	43.20	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 519..576 e-value: 5.8E-6 score: 27.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 251..373 e-value: 2.0E-5 score: 26.4
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..79 e-value: 2.1E-65 score: 222.0
None	No IPR available	GENE3D	1.10.340.70		coord: 421..509 e-value: 7.1E-18 score: 66.6
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 163..362
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 163..362
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..154 e-value: 1.80362E-79 score: 245.968
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 248..363 e-value: 2.90478E-57 score: 185.774
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 245..341 e-value: 6.6E-33 score: 113.2
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 3..153 e-value: 6.7E-24 score: 84.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..154 score: 9.654579
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..154 e-value: 2.1E-65 score: 222.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 164..250 e-value: 1.5E-32 score: 113.4
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 454..510 e-value: 4.0E-17 score: 62.0
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..347
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 522..572

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0065431.1	Cmc03g0065431.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding