Cmc03g0065211 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0065211
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein STAY-GREEN LIKE, chloroplastic
Location	CMiso1.1chr03: 6484551 .. 6486918 (-)
RNA-Seq Expression	Cmc03g0065211
Synteny	Cmc03g0065211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTATTTTGAAAAATTGAAAATATTAGAAAAGAAGATGAATATTTTGTGGAGGAAGATGGGTGGACTCAGATTTTGTCCACATGAACCTCCATTTCCTCACATCCGTGATACACGACAATGGTTCGTTCTGATTCTGAAAGATGAAGTTGAAGAAGAAGACCCGTAAGTTGTTATGCGTCTTCCATGGCCTTTCATTGTGTTCGTTACTCTTTTTCACCGTTGCCAGGCAAACCCAACTTCAAATTAGTTCAAAGGAACAACCCTGCTCTTCTCTTTTCTTCATTCTCTACCACTCGGGCTTCTTACAACACTCTCGTCTCTGAGGTACCATTTTTCTTTCACTTTCCTCCTTTCCATTTGTTTCTTTTTTATGTGGGCTATGGCATTACTGCAAGTTTGGTAGGTTGAAGTTGCGAGTTTAATTGAAAGGGATCTCTGTGGGTGAAGTAATTTATTTGATGCTTAGAAATTTCCCCTATCTGATTCTGATTTGCATTGCTGTCCTTCGAGTTTGAAGGATTCTGTTGTTGATTATTGGTTGGGTCTCATCCAGATTGCTAGTTAAATTTGACCGAAGAAACTAATTTCCAAAATTTGTGTGTTTTCGTGTTGATTTTAAGTTCTGGGTTGCACTCAATTGTTTAAATTTTCCAATGATGAACTTGTAATGTGTTGTTGAATTTTCAGTAAGCAATGCACTTTATAATACTGCTGTAAATAAGATAAGAAATTCAGCAGTTCAGTCAATATTGTAAAGCATCCAAATAGCGAATCATCTGGTTATTTATTTTGTTGGTCCCTTCAAATCTTGAATTAAGTTCAGATTTAAACCTTTCTTGGATGGTTTGAACAATTATTGATTCAAAGCATCCAAAAAGCAAAGAGGGTTTTGTCTGTTCTTTCTGCTGCGTTATTTCTGTCAAATTGAATTAACTCTGTCTTATGATGCATGGATCTTTGGTAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCCAAGTTAAAAGTTGTGTTCAGTAGAGAAGTGACAAAGTCTGCAGGAATTATCCCGAGAACATATATTCTATCACATTGTGACTTTACTGCTAATCTCACCTTAACCATCTCTGACGTTATCAACCTTGATCAGGTACAAGTCCGTTGCTACTGTTTGAATAGAACAACACATTGATCTTTTCTTCTAATTTTTGGGTCTGAATGTACTAATATAGTTGAGAGGGTGGTATAACAAGGACGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTATCTTCATGTGCATTGCTATGTGAGCGGTCCGAGTTCTTTGCTCGACGTTGCTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTAAGTTTATCTTTTGTTGCCGCCTCTCCATCCCAATGTAATCGTTATCCTAATCGTGTAGACATTTTTTGAAAAAGTTTGACATGGAACATCTATACTCCAAATTTCTATAAAACAGAAGATGGAGAATTTGCCACCATTTTTTAAATTTGTCTACATTCAGAGTCTTAAACAAATAGAACTCCTAATTAGCTGTCGTAGAAATCCCAGAGACCTAGAAGTGACATAGTTCAGCAATAGTTAAGATTGTTGTAAGATTAAAAGCCCCTCTTCTTGTGAAACCAGGTGCTTGAATCTGTTCTGTATGGAGATTCAATTCTGTTTGGGGAGAACCCTGAGCTCCTAGATTCCTTGGTCAGAGTATATTTTCATTCTAGTTCACCAAAATACAATCGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGTAAACTTGATAACATGTTAACAAAAAATTTCATTGAATACTTGATCTAGACAACTTGATATCTGTCTCTTGTCAATTTTTTTTCTTTTTTGTTCTCATTTTTCAGGGGAGGCATCATCATATTCAAGGACTCCTGAACGGAAGTAAGGATGTGTCCTCTACTAAAAAGTTGAGAAGCCCCAAATCAATCTTTCAAGCTCTCTTTGCTTTCCTTCTGTGAACTGCATTGCATAAACTGGTAAATTGTTATAATGTTAATCTTCAAGAAATAGCTATCTTTTAAAAGTTTAAACTTCCATTTAATGCAATTCTTTTGTGGAATGAGCAAAAGGGTACTCTTGTTTTGTGGAATGTATGAGTAACTCTTTGCTAAGGGAGAAAGATGCTTCTGTGGGTCAGTTTATTCTTTGACAAAAAAGAAATGCATATTTGTTTCTGCAATTCTTGTGTAAATGAGAACAATTCCTTGAAAATTGTTTGGTGGCTAATCTACTTGCATCTTGTTACCTAAGCTTTCACATTTTCGAAATTGAAATTCACATTTTTTTGTGTTTG

mRNA sequence

CATTATTTTGAAAAATTGAAAATATTAGAAAAGAAGATGAATATTTTGTGGAGGAAGATGGGTGGACTCAGATTTTGTCCACATGAACCTCCATTTCCTCACATCCGTGATACACGACAATGGTTCGTTCTGATTCTGAAAGATGAAGTTGAAGAAGAAGACCCGTAAGTTGTTATGCGTCTTCCATGGCCTTTCATTGTGTTCGTTACTCTTTTTCACCGTTGCCAGGCAAACCCAACTTCAAATTAGTTCAAAGGAACAACCCTGCTCTTCTCTTTTCTTCATTCTCTACCACTCGGGCTTCTTACAACACTCTCGTCTCTGAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCCAAGTTAAAAGTTGTGTTCAGTAGAGAAGTGACAAAGTCTGCAGGAATTATCCCGAGAACATATATTCTATCACATTGTGACTTTACTGCTAATCTCACCTTAACCATCTCTGACGTTATCAACCTTGATCAGTTGAGAGGGTGGTATAACAAGGACGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTATCTTCATGTGCATTGCTATGTGAGCGGTCCGAGTTCTTTGCTCGACGTTGCTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTGCTTGAATCTGTTCTGTATGGAGATTCAATTCTGTTTGGGGAGAACCCTGAGCTCCTAGATTCCTTGGTCAGAGTATATTTTCATTCTAGTTCACCAAAATACAATCGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGGGAGGCATCATCATATTCAAGGACTCCTGAACGGAAGTAAGGATGTGTCCTCTACTAAAAAGTTGAGAAGCCCCAAATCAATCTTTCAAGCTCTCTTTGCTTTCCTTCTGTGAACTGCATTGCATAAACTGGTAAATTGTTATAATGTTAATCTTCAAGAAATAGCTATCTTTTAAAAGTTTAAACTTCCATTTAATGCAATTCTTTTGTGGAATGAGCAAAAGGGTACTCTTGTTTTGTGGAATGTATGAGTAACTCTTTGCTAAGGGAGAAAGATGCTTCTGTGGGTCAGTTTATTCTTTGACAAAAAAGAAATGCATATTTGTTTCTGCAATTCTTGTGTAAATGAGAACAATTCCTTGAAAATTGTTTGGTGGCTAATCTACTTGCATCTTGTTACCTAAGCTTTCACATTTTCGAAATTGAAATTCACATTTTTTTGTGTTTG

Coding sequence (CDS)

ATGGCCTTTCATTGTGTTCGTTACTCTTTTTCACCGTTGCCAGGCAAACCCAACTTCAAATTAGTTCAAAGGAACAACCCTGCTCTTCTCTTTTCTTCATTCTCTACCACTCGGGCTTCTTACAACACTCTCGTCTCTGAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCCAAGTTAAAAGTTGTGTTCAGTAGAGAAGTGACAAAGTCTGCAGGAATTATCCCGAGAACATATATTCTATCACATTGTGACTTTACTGCTAATCTCACCTTAACCATCTCTGACGTTATCAACCTTGATCAGTTGAGAGGGTGGTATAACAAGGACGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTATCTTCATGTGCATTGCTATGTGAGCGGTCCGAGTTCTTTGCTCGACGTTGCTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTGCTTGAATCTGTTCTGTATGGAGATTCAATTCTGTTTGGGGAGAACCCTGAGCTCCTAGATTCCTTGGTCAGAGTATATTTTCATTCTAGTTCACCAAAATACAATCGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGGGAGGCATCATCATATTCAAGGACTCCTGAACGGAAGTAAGGATGTGTCCTCTACTAAAAAGTTGAGAAGCCCCAAATCAATCTTTCAAGCTCTCTTTGCTTTCCTTCTGTGA

Protein sequence

MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEASKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALFAFLL

Homology

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BLAST of Cmc03g0065211 vs. NCBI nr
Match: XP_038884235.1 (magnesium dechelatase SGRL, chloroplastic [Benincasa hispida])

HSP 1 Score: 478.4 bits (1230), Expect = 3.7e-131
Identity = 234/244 (95.90%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEA 60
           MAFHCVRYSFSP PGKPNFKLVQRNNP LLFSSF TTRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPTTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVVFSREV KSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180
           KVKDEM LHVHCYVSGP+SLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLD+
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHH+QGLL GSKDVSS KKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHVQGLLRGSKDVSSPKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

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BLAST of Cmc03g0065211 vs. NCBI nr
Match: XP_004144252.1 (magnesium dechelatase SGRL, chloroplastic [Cucumis sativus] >KGN47507.1 hypothetical protein Csa_019065 [Cucumis sativus])

HSP 1 Score: 477.2 bits (1227), Expect = 8.2e-131
Identity = 235/244 (96.31%), Postives = 238/244 (97.54%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEA 60
           MA HCVRYSFSP P KPNFKLVQRNNPALLFSSFSTT ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MALHCVRYSFSPSPAKPNFKLVQRNNPALLFSSFSTTPASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180
           KVKDEM LHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS
Sbjct: 121 KVKDEMCLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHH+QGLL+GSKDVS +KKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLSGSKDVSPSKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

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BLAST of Cmc03g0065211 vs. NCBI nr
Match: TYK23787.1 (protein STAY-GREEN LIKE [Cucumis melo var. makuwa])

HSP 1 Score: 463.0 bits (1190), Expect = 1.6e-126
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 16  KPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEASKLKVVFSREVTKSA 75
           KPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEASKLKVVFSREVTKSA
Sbjct: 9   KPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEASKLKVVFSREVTKSA 68

Query: 76  GIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVS 135
           GIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVS
Sbjct: 69  GIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVS 128

Query: 136 GPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNR 195
           GPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNR
Sbjct: 129 GPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNR 188

Query: 196 LECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALFAFLL 245
           LECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALFAFLL
Sbjct: 189 LECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALFAFLL 237

[Close]

BLAST of Cmc03g0065211 vs. NCBI nr
Match: XP_022141380.1 (protein STAY-GREEN LIKE, chloroplastic [Momordica charantia])

HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124
Identity = 221/244 (90.57%), Postives = 232/244 (95.08%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSP PGKP FKLV R+NPA+LFSS  TTRASY+TLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPGKPKFKLVHRSNPAVLFSSLRTTRASYSTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVV +RE+ KSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVLTRELNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180
           KVKDEM LHVHCYVSGP+SLLD+AAEFRYHIFSKELPLVLESVLYGDS+LFGENPELLD+
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSVLFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALF 240
           LVRVYFHSSS KYNRLECWGPLKDAVLGRHHH+QGLL GSKD+SS KKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDMSSPKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of Cmc03g0065211 vs. NCBI nr
Match: XP_022960677.1 (protein STAY-GREEN LIKE, chloroplastic [Cucurbita moschata] >XP_023546959.1 protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6602142.1 Magnesium dechelatase SGRL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032831.1 Protein STAY-GREEN LIKE, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118
Identity = 214/244 (87.70%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSP P KP FKLV  N PA+LFSS  +TRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPAVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV F+REV K AGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180
           KVKDEM LHVHCYVSGP+SLLD+ AEFRYHIFSKELPLVLESVLYGDSILF ENPELLD+
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALF 240
           LVRVYFHSSS KYNRLECWGPLKDAV GRHHH+QGLL  S+DVSS KKLR+PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of Cmc03g0065211 vs. ExPASy Swiss-Prot
Match: Q94AQ9 (Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGRL PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.3e-75
Identity = 155/263 (58.94%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFK---------------LVQRNNPALLFSSFSTTRASYNTLV 60
           MA + V Y   P+   PN +               L+ R       S+ S    SYNTLV
Sbjct: 1   MACYIVPYYHHPVLSHPNREIFSHRHHHHHRFCNNLLNRRISVPRSSAISDGGVSYNTLV 60

Query: 61  SEAVRILVPPARFEASKLKVVFSREV--TKSAG--IIPRTYILSHCDFTANLTLTISDVI 120
           SEAVR+LVP A F++SKLKV F  E+   KS G  I PRTYILSHCDFTANLTLTIS+VI
Sbjct: 61  SEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVI 120

Query: 121 NLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLE 180
           NLDQL GWY KDDVVAEWKKV DE+ LH+HC VSG S L DVAAE RYHIFSKELPLVL+
Sbjct: 121 NLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKELPLVLK 180

Query: 181 SVLYGDSILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSK 240
           +V++GDS++F ENPEL+D+ V VYFHSS+PKYNR+ECWGPLKDA  G+    QG   G  
Sbjct: 181 AVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGKQ---QGNHQGFL 240

Query: 241 DVSSTKKLRSPKSIFQALFAFLL 245
             ++++KL   KSIF  LF FLL
Sbjct: 241 SSTTSRKLIRHKSIFHTLFTFLL 260

[Close]

BLAST of Cmc03g0065211 vs. ExPASy Swiss-Prot
Match: A9YF60 (Protein STAY-GREEN homolog, chloroplastic OS=Capsicum annuum OX=4072 GN=SGR PE=1 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-46
Identity = 100/204 (49.02%), Postives = 130/204 (63.73%), Query Frame = 0


Query: 34  FSTTRASYNTLVSEAVRILVPPARFEASKLKVVF-SREVTKSAGIIPRTYILSHCDFTAN 93
           + T R S+       V  L  PA FEASKLKV+F   +  K  G +PRTY L+H D T+ 
Sbjct: 25  YKTRRKSHKNQSIVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSK 84

Query: 94  LTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDEMYLHVHCYVSGPSSLLDVAAEFRY 153
           LTL IS  IN  QL+GWYN   +D+VVAEWKKVK +M LHVHC++SG   +LD+ A  RY
Sbjct: 85  LTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFMLDLFARLRY 144

Query: 154 HIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDAVLGR 213
           +IF KELP+VL++ ++GD  L    PEL  +LV VYFHS+  ++N++ECWGPLKDA    
Sbjct: 145 YIFCKELPVVLKAFVHGDENLLKNYPELQQALVWVYFHSNIQEFNKVECWGPLKDAASPS 204

Query: 214 HHHIQGLLNGSKDVSSTKKLRSPK 234
              + G +N S   +S  K   PK
Sbjct: 205 SSGVGGGMNTSFTSNSNIKWILPK 228

[Close]

BLAST of Cmc03g0065211 vs. ExPASy Swiss-Prot
Match: Q0J8Q3 (Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0692600 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.5e-46
Identity = 103/208 (49.52%), Postives = 136/208 (65.38%), Query Frame = 0


Query: 46  SEAVRILVPPARFEASKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQ 105
           S A ++L PP  F+A KL V F+     S+   PR Y L+HCDFTANLTL +SD I  D+
Sbjct: 54  SLAAKLLGPPTSFDAGKLTVEFAHSHGNSSSGFPRAYTLTHCDFTANLTLAVSDTIAADR 113

Query: 106 LRGWYNKDDVVAEWKKVKDE--MYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESV 165
                  DDV AEWK+ + +  M LHVHC+VSG + L  +AA FRY++FSKELPLVL++V
Sbjct: 114 R---LRADDVFAEWKQQQQQEGMALHVHCFVSGANLLHGLAAGFRYYVFSKELPLVLKAV 173

Query: 166 LYGDSILFGENPELLDSLVRVYFHSSS-PKYNRLECWGPLKDA----VLGRHHHIQGLLN 225
           ++GD++LF E PELL++ V V+FHSSS  KYNRLECWGPL++A       + H ++ L N
Sbjct: 174 VHGDALLFAEQPELLEAKVWVHFHSSSNAKYNRLECWGPLREAANAETTHKRHALEQLHN 233

Query: 226 GSKDVS--STKKLRSPKSIFQALFAFLL 245
                +    +K  SP +IF AL A LL
Sbjct: 234 AITKGTRRRRRKWSSPDAIFSALLALLL 258

[Close]

BLAST of Cmc03g0065211 vs. ExPASy Swiss-Prot
Match: A2Z3E5 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-45
Identity = 91/160 (56.88%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 52  LVPPARFEASKLKVVF---SREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 111
           L  PA FEASKLKV+F     E  +  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 112 WYNK---DDVVAEWKKVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLY 171
           WYNK   D+VVAEWKKV+  M LHVHC++SG   LLD+ A  RY+IF KELP+VL++ ++
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

Query: 172 GDSILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDA 206
           GD  LF  +PEL ++ V VYFHS+ P++NR+ECWGPL+DA
Sbjct: 171 GDGNLFSRHPELEEATVWVYFHSNLPRFNRVECWGPLRDA 210

[Close]

BLAST of Cmc03g0065211 vs. ExPASy Swiss-Prot
Match: Q652K1 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SGR PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-45
Identity = 91/160 (56.88%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 52  LVPPARFEASKLKVVF---SREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 111
           L  PA FEASKLKV+F     E  +  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 112 WYNK---DDVVAEWKKVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLY 171
           WYNK   D+VVAEWKKV+  M LHVHC++SG   LLD+ A  RY+IF KELP+VL++ ++
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

Query: 172 GDSILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDA 206
           GD  LF  +PEL ++ V VYFHS+ P++NR+ECWGPL+DA
Sbjct: 171 GDGNLFSRHPELEEATVWVYFHSNLPRFNRVECWGPLRDA 210

[Close]

BLAST of Cmc03g0065211 vs. ExPASy TrEMBL
Match: A0A0A0KGP2 (Staygreen domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G349840 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.0e-131
Identity = 235/244 (96.31%), Postives = 238/244 (97.54%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEA 60
           MA HCVRYSFSP P KPNFKLVQRNNPALLFSSFSTT ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MALHCVRYSFSPSPAKPNFKLVQRNNPALLFSSFSTTPASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180
           KVKDEM LHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS
Sbjct: 121 KVKDEMCLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHH+QGLL+GSKDVS +KKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLSGSKDVSPSKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of Cmc03g0065211 vs. ExPASy TrEMBL
Match: A0A5D3DJN5 (Protein STAY-GREEN LIKE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001140 PE=3 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.7e-127
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 16  KPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEASKLKVVFSREVTKSA 75
           KPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEASKLKVVFSREVTKSA
Sbjct: 9   KPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEASKLKVVFSREVTKSA 68

Query: 76  GIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVS 135
           GIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVS
Sbjct: 69  GIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVS 128

Query: 136 GPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNR 195
           GPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNR
Sbjct: 129 GPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNR 188

Query: 196 LECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALFAFLL 245
           LECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALFAFLL
Sbjct: 189 LECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALFAFLL 237

[Close]

BLAST of Cmc03g0065211 vs. ExPASy TrEMBL
Match: A0A6J1CHX2 (protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011794 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 221/244 (90.57%), Postives = 232/244 (95.08%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSP PGKP FKLV R+NPA+LFSS  TTRASY+TLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPGKPKFKLVHRSNPAVLFSSLRTTRASYSTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVV +RE+ KSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVLTRELNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180
           KVKDEM LHVHCYVSGP+SLLD+AAEFRYHIFSKELPLVLESVLYGDS+LFGENPELLD+
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSVLFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALF 240
           LVRVYFHSSS KYNRLECWGPLKDAVLGRHHH+QGLL GSKD+SS KKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDMSSPKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of Cmc03g0065211 vs. ExPASy TrEMBL
Match: A0A6J1H833 (protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461394 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.9e-119
Identity = 214/244 (87.70%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSP P KP FKLV  N PA+LFSS  +TRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPAVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV F+REV K AGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180
           KVKDEM LHVHCYVSGP+SLLD+ AEFRYHIFSKELPLVLESVLYGDSILF ENPELLD+
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALF 240
           LVRVYFHSSS KYNRLECWGPLKDAV GRHHH+QGLL  S+DVSS KKLR+PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of Cmc03g0065211 vs. ExPASy TrEMBL
Match: A0A6J1JL65 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486879 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.7e-118
Identity = 213/244 (87.30%), Postives = 222/244 (90.98%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSP P KP FKLV  N P +LFSS  +TRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPVVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV F+REV K AGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180
           KVKDEM LHVHCYVSGP+SLLD+ AEFRYHIFSKELPLVLESVLYGDSILF ENPELLD+
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSKDVSSTKKLRSPKSIFQALF 240
           LVRVYFHSSS KYNRLECWGPLKDAV GRHHH+QGLL  S+DVSS KKLR+PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of Cmc03g0065211 vs. TAIR 10
Match: AT1G44000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-76
Identity = 155/263 (58.94%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 1   MAFHCVRYSFSPLPGKPNFK---------------LVQRNNPALLFSSFSTTRASYNTLV 60
           MA + V Y   P+   PN +               L+ R       S+ S    SYNTLV
Sbjct: 1   MACYIVPYYHHPVLSHPNREIFSHRHHHHHRFCNNLLNRRISVPRSSAISDGGVSYNTLV 60

Query: 61  SEAVRILVPPARFEASKLKVVFSREV--TKSAG--IIPRTYILSHCDFTANLTLTISDVI 120
           SEAVR+LVP A F++SKLKV F  E+   KS G  I PRTYILSHCDFTANLTLTIS+VI
Sbjct: 61  SEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVI 120

Query: 121 NLDQLRGWYNKDDVVAEWKKVKDEMYLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLE 180
           NLDQL GWY KDDVVAEWKKV DE+ LH+HC VSG S L DVAAE RYHIFSKELPLVL+
Sbjct: 121 NLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKELPLVLK 180

Query: 181 SVLYGDSILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHIQGLLNGSK 240
           +V++GDS++F ENPEL+D+ V VYFHSS+PKYNR+ECWGPLKDA  G+    QG   G  
Sbjct: 181 AVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGKQ---QGNHQGFL 240

Query: 241 DVSSTKKLRSPKSIFQALFAFLL 245
             ++++KL   KSIF  LF FLL
Sbjct: 241 SSTTSRKLIRHKSIFHTLFTFLL 260

[Close]

BLAST of Cmc03g0065211 vs. TAIR 10
Match: AT4G22920.1 (non-yellowing 1 )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 97/209 (46.41%), Postives = 130/209 (62.20%), Query Frame = 0


Query: 12  PLPGKPNFKLVQRNNPALLFSSFSTTRASYNTLVSEAVRILVPPARFEASKLKVVF-SRE 71
           P   KP +   + N+ +     F+  R+         V  L  PA FE+SKLKV+F   +
Sbjct: 11  PTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESSKLKVLFLGVD 70

Query: 72  VTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDEMY 131
             K    +PRTY L+H D TA LTL IS  IN  QL+GW N   +D+VVAEWKKVK +M 
Sbjct: 71  EKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANRLYRDEVVAEWKKVKGKMS 130

Query: 132 LHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFH 191
           LHVHC++SG   LLD+ A+FRY IF KELP+VL++ ++GD  L    PEL ++LV VYFH
Sbjct: 131 LHVHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNNYPELQEALVWVYFH 190

Query: 192 SSSPKYNRLECWGPLKDAVLGRHHHIQGL 217
           S+  ++N++ECWGPL +AV    H  + L
Sbjct: 191 SNVNEFNKVECWGPLWEAVSPDGHKTETL 219

[Close]

BLAST of Cmc03g0065211 vs. TAIR 10
Match: AT4G11910.1 (INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-44
Identity = 93/182 (51.10%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 35  STTRASYNTLVSEAVRILVPPARFEASKLKVVF-SREVTKSAGIIPRTYILSHCDFTANL 94
           +T R+         V  L  PA FEASKLKV+F   +  K    +PRTY L+H D TA L
Sbjct: 30  TTRRSKMKNRSIVPVARLFGPAIFEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKL 89

Query: 95  TLTISDVINLDQLRGWYNK---DDVVAEWKKVKDEMYLHVHCYVSGPSSLLDVAAEFRYH 154
           TL IS  IN  QL+GW NK   D+VV EWKKVK +M LHVHC++SG    L++ A+ RY+
Sbjct: 90  TLAISQSINNSQLQGWANKLFRDEVVGEWKKVKGKMSLHVHCHISGGHFFLNLIAKLRYY 149

Query: 155 IFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDAVLGRH 213
           IF KELP+VLE+  +GD  L   +PEL +S V VYFHS+ P+YN++ECWGPL +A + +H
Sbjct: 150 IFCKELPVVLEAFAHGDEYLLNNHPELQESPVWVYFHSNIPEYNKVECWGPLWEA-MSQH 209

[Close]

BLAST of Cmc03g0065211 vs. TAIR 10
Match: AT4G11911.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 165.6 bits (418), Expect = 4.9e-41
Identity = 95/195 (48.72%), Postives = 123/195 (63.08%), Query Frame = 0


Query: 16  KPNFKLVQRNNPALLFSSFSTTRASYNTLVSE-AVRILVPPARFEASKLKVVF-SREVTK 75
           KP+F   +R++     S  STTR+S     S   V  L   A FEASKL V F   +  K
Sbjct: 15  KPDFSDKERSS-----SIPSTTRSSKRKKQSMFPVARLFGQAIFEASKLNVKFLGVDEKK 74

Query: 76  SAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDEMYLHV 135
               +PRTY  +H D TA LTL IS  IN  QL+GW N   +D+VVAEW+KVK  M LHV
Sbjct: 75  HPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVAEWRKVKSNMSLHV 134

Query: 136 HCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDSLVRVYFHSSS 195
           HC++SG   LLD+ AE RY IF KELP+VL++ ++GD  +    PEL ++ V VYFHS+ 
Sbjct: 135 HCHISGDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPELHEAFVWVYFHSNI 194

Query: 196 PKYNRLECWGPLKDA 206
           PK+N++ECWG L +A
Sbjct: 195 PKFNKVECWGRLCEA 204

The following BLAST results are available for this feature:

BLAST of Cmc03g0065211 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884235.1	3.7e-131	95.90	magnesium dechelatase SGRL, chloroplastic [Benincasa hispida]	[more]
XP_004144252.1	8.2e-131	96.31	magnesium dechelatase SGRL, chloroplastic [Cucumis sativus] >KGN47507.1 hypothet...	[more]
TYK23787.1	1.6e-126	100.00	protein STAY-GREEN LIKE [Cucumis melo var. makuwa]	[more]
XP_022141380.1	2.6e-124	90.57	protein STAY-GREEN LIKE, chloroplastic [Momordica charantia]	[more]
XP_022960677.1	1.2e-118	87.70	protein STAY-GREEN LIKE, chloroplastic [Cucurbita moschata] >XP_023546959.1 prot...	[more]

BLAST of Cmc03g0065211 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AQ9	2.3e-75	58.94	Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR...	[more]
A9YF60	2.9e-46	49.02	Protein STAY-GREEN homolog, chloroplastic OS=Capsicum annuum OX=4072 GN=SGR PE=1...	[more]
Q0J8Q3	6.5e-46	49.52	Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2Z3E5	1.4e-45	56.88	Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR ...	[more]
Q652K1	1.4e-45	56.88	Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SG...	[more]

BLAST of Cmc03g0065211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGP2	4.0e-131	96.31	Staygreen domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G349840 P...	[more]
A0A5D3DJN5	7.7e-127	100.00	Protein STAY-GREEN LIKE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CHX2	1.2e-124	90.57	protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1H833	5.9e-119	87.70	protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JL65	1.7e-118	87.30	protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Cmc03g0065211 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44000.1	1.6e-76	58.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G22920.1	1.2e-44	46.41	non-yellowing 1	[more]
AT4G11910.1	2.1e-44	51.10	INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidops...	[more]
AT4G11911.1	4.9e-41	48.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024438	Staygreen protein	PFAM	PF12638	Staygreen	coord: 57..205 e-value: 1.6E-59 score: 199.9
None	No IPR available	PANTHER	PTHR31750	PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED	coord: 22..244
None	No IPR available	PANTHER	PTHR31750:SF18	PROTEIN STAY-GREEN LIKE, CHLOROPLASTIC	coord: 22..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0065211.1	Cmc03g0065211.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane