Cmc03g0065081 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0065081
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr03: 6376069 .. 6380680 (-)
RNA-Seq Expression	Cmc03g0065081
Synteny	Cmc03g0065081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGAAAAAGTATATTCATAAAAAAGAGAAGACAGATGAAAGATTGTAAACTTGATAGGGTTATTTCCGACCATTTCCTCAATCCCCTTCGCTCACAGCCAAACGACCGCCGCCAAATCCGCCACCACTTCAATCCTCGAACACTTGAAAGAGGGTCGCTTCCGAAGAGCTGTCTTATCCTGTTTGATTTCCCATTTCCCTTTCTACATCCTCTCTACTCTCCATTCTCCCAAATTTGCTCTTCCACTCGGCCCCACTCAAGAGTCGCCATTGTCTACTTCACCCAAGTTCCGTTCTTCATAGCACAACCGTACTTATATGCACCTCCAGCTAAATAAACTTCTTGGTGCGCACAAGGCTTTGCTTTCTCATTACTCTTCTCTGATACGCCAGTGTTTAGTTGTTGGATCTGTTCACAATGCCAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTGACAGCAATACTTTTCTGGGCAATCATTGTCTTCAGCTATATACGCTATTTGGTCCTGTCCATGACGTATTGAAAGCATTTGATGGGATTAAAGATAAGAATATTATATCCTGGAATATATGCTTGAAGGGTATGTTTAGATTTGGCGACGTCGATGCTCCCCGTCACCTGTTCGATGTAATGCCTGAGAGGGACATTGTTTCTTGGAACACTATGATTTCTGGCTACGTTTCATCTGGATTTGCTAAGAGTGCAATGGGCATTTCTCTGGAAATGCAAAATGCTGGTTTTAGACCAAGTGAGTATACCTTCTCCATTTTGCTTTCACTTGTGTCGTCTGCTTTTCATGGTAAGCAAGTTCATGGCAGTATGATACGTAGTGGTGTGGATGTATCAAGTATGGTGCTTGGGAATTCATTGATTGATATGTATGGAAAAGTTGGCCTTGTTGATTATATGTTTGTCATATTTTCTAGTATGGAAAAGGTGGATGTTATCTCTTGGAATTCTTTGATTTTAGGCTGTCATAGATCAGGCTTTAGAGTATTGGCACTCAATCAGTTCTTTCTAATGAGAACCACTGAGCACTCACCTGATCAGTTCACTATATCAATGGTGATCAGTATCTGCTGTTGCCTCCAAGAGTTGGAACTGGGTAAGCAAATTTTTGCTTTCTGTATCAAGATGGGATTTACTTCTAACAGCATTGTACTTAGTGCTACAATTGACTTGTTTTCCAAATGCGACAGTTTGAAGGTTGCAGTGCAGCTTTTTGAAGATACCAATCAATTGGATCCAGTTCTTTGTAATGTCATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATAAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAAAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAGTATCTGGAAATAATACATTAAAATTGTTTTGTGATATTGATTATGTGAACCTCAAATTTATCGAATTCTTAATACCCAAGGGCCAACATCTCAATCTTTGGGGTTGTGGACTCTCTGACAATCACACTGAACGGATGCTCCCAGACTGTTCTTAGGAACTTGTGGATGAGACATGGTAAACGTATTGTGCTTGGAATCCTTCATAGAGTGCCTCATTGGATTAAGTTTTTTCTGGATTTGAAGATACTGTTTCCTCTTTGGTGCAAATCTGATGCCCTGTTAAGAGATTAGCAGCTTTGTTTTGATGTTCAGCGACTATTCTCTTTGCATTTGTGTGGGTTTGCAATGGTGGGATACCAATTGAAAGCATTTGCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAGACGTGAAGATGATGTAATGCTTCCTCCAACTCCTCATTGGCCTCCACCTATATCATTGTGGCCACCTGTTTAAATAATTATATTATCCATGTTTGTTTTTTGAGTTTAACTCTTACAAGCTTGCTCACCTTAACCCTTATCTTAATTTTTATCTCATTGAAAAATCATAATTTCATGTAGAATTAACGATGGAAGTTATTTCCCATTACAGTATCCAATTTTTGCTATTGGCCACTGAAGAGCAATTCATGTTTAAGAGCTCAACGTGAAGAAGATAGGGTCTTGATCTACCCAGCATATTGAATCAATCTTATAATCCTCATCAAGTCAAGCCATTCACTAACTAAGCTGCCAAGACGTGCTTAGTGGAATTGTAGTGAGTTCATTGAGGTGCTGTAAATGGGTTCATAGCATGCTGGAAGAAGGATAATCTGTGTTCTGTAATTCCAACACTACAACAAACTTGGTGATACTTTGTGTTTCTACTTGAAGGGTGAGGGGATTTAGTTTTAGTTGCCTTTGTTGGTACATAGCACAACCCACTGATTATTTATTCTTTGACATAAATATTCATAAATTATATGATATGATTCTAATTGAAAATAGGGCAAGAACTGACCATACAATTGACAAATATTCTGATGATCAATAGGTCACTTTGGTGCTAATAACTTTGTAGAAATGATACTGTAGTGTGTGAAAGATCGTATTGTATAAAAAAATCTTATTGATGCATATATCATTATATCCTATTTCTATTCCATGCATTCTCGGTAAGATAATCTGGTTTTTCTTTTAAATGCTCTGATTCTTTCTAGGGTCTTTGTAAGCTCTTGTTCCTCTCATAGGTTTGATTACTAATAGTAGAAAAGACTAATCGGTTTTTGTGTTACTGGGGAGATAAACTAAAACAAAAATTGATGGATGACGTGCACTAAGCAGACTGTTCTCTTCATCAAAAGCTTTTTGTTCTGAAGTAGCTCTCAGGATAGCTCATCTGCACAATGCAACGGACCAGTTTGTCTGCTAGGCTAGTAGTAGCATGTCTATAGAGCAAGCATTGGATCCCGGGTCATCTTCTTGGTGTGAAAGAAATAGGTAAGGAAGCTGTTGCATATATTGTGTATATTTATGCTGTCTGCCCAAATTACTGTTGCGGCTTGTCTAATAGCATGATTCAACCTCATAAGAGATGATTTGTATTAAGGAAGAACCTCAAACAATTATACTCTAAAATGGAATTCTTAGATCTTTTGCCTTTTTCTCTACTGTGGATGGGCATGTGTTTCCGCCTGCTATTCGATATATCTAAAATGCTGCAATGCACTTCTCAATTCAGTTGACCTGTTAGAGTGAAAAAGCCAGTTAATAAATGTCAAATATTGAGTGAATAGGAAAGTGCCTGACACTGGTATGTCAAAGAAATTAGTGACAAACAACATGGATGCTGAAGTTTTATCTCATGATAAGCGTTAACTCTTGCTGGTGCTGTCTGTGCCCTGTGACTGTGAGTTAGGCGACCAGGTTATCTGAATTGGAAGAGTAACTGAGGTGCATACGACAATGATGCTGGGATGATGAGAAAGTAGCATGTACCAGCTCCGAGGAATTTGCAAGTTTCCACAACCTTGATCGGAGGCTCCACCTTTTTTTGGTTTTTTTCTTTGTTTTTTATTTTGGGTGCTGATAAAGGGCGAGTAACTATTGAAATGGATTACCCTCCATCTCTCAGGTTGAAATTCATAGTTAATTATTGTAAAGAAATGTAGAATGCTGTTGAAGTGTATTTCAAAGATGTGGCAAAATGTTTCCCTTTCGTGATTTTACATTTAGAGATGAATTATGCTGATTTTCAGGCCAATATGCCACCTAAGGAACATTTTTCTCTACAGGCGACTTATTTCTCAGTGAACAAGTATTTTTCGAGATT

mRNA sequence

TGGGAAAAAGTATATTCATAAAAAAGAGAAGACAGATGAAAGATTGTAAACTTGATAGGGTTATTTCCGACCATTTCCTCAATCCCCTTCGCTCACAGCCAAACGACCGCCGCCAAATCCGCCACCACTTCAATCCTCGAACACTTGAAAGAGGGTCGCTTCCGAAGAGCTGTCTTATCCTGTTTGATTTCCCATTTCCCTTTCTACATCCTCTCTACTCTCCATTCTCCCAAATTTGCTCTTCCACTCGGCCCCACTCAAGAGTCGCCATTGTCTACTTCACCCAAGTTCCGTTCTTCATAGCACAACCGTACTTATATGCACCTCCAGCTAAATAAACTTCTTGGTGCGCACAAGGCTTTGCTTTCTCATTACTCTTCTCTGATACGCCAGTGTTTAGTTGTTGGATCTGTTCACAATGCCAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTGACAGCAATACTTTTCTGGGCAATCATTGTCTTCAGCTATATACGCTATTTGGTCCTGTCCATGACGTATTGAAAGCATTTGATGGGATTAAAGATAAGAATATTATATCCTGGAATATATGCTTGAAGGGTATGTTTAGATTTGGCGACGTCGATGCTCCCCGTCACCTGTTCGATGTAATGCCTGAGAGGGACATTGTTTCTTGGAACACTATGATTTCTGGCTACGTTTCATCTGGATTTGCTAAGAGTGCAATGGGCATTTCTCTGGAAATGCAAAATGCTGGTTTTAGACCAAGCTGTCATAGATCAGGCTTTAGAGTATTGGCACTCAATCAGTTCTTTCTAATGAGAACCACTGAGCACTCACCTGATCAGTTCACTATATCAATGGTGATCAGTATCTGCTGTTGCCTCCAAGAGTTGGAACTGGTGCAGCTTTTTGAAGATACCAATCAATTGGATCCAGTTCTTTGTAATGTCATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATAAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAAAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAGTATCTGGAAATAATACATTAAAATTGTTTTGTGATATTGATTATGTGAACCTCAAATTTATCGAATTCTTAATACCCAAGGGCCAACATCTCAATCTTTGGGGTTGTGGACTCTCTGACAATCACACTGAACGGATGCTCCCAGACTGTTCTTAGGAACTTGTGGATGAGACATGGTAAACGTATTGTGCTTGGAATCCTTCATAGAGTGCCTCATTGGATTAAGTTTTTTCTGGATTTGAAGATACTGTTTCCTCTTTGGTGCAAATCTGATGCCCTGTTAAGAGATTAGCAGCTTTGTTTTGATGTTCAGCGACTATTCTCTTTGCATTTGTGTGGGTTTGCAATGGTGGGATACCAATTGAAAGCATTTGCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAGACGTGAAGATGATTATCCAATTTTTGCTATTGGCCACTGAAGAGCAATTCATGTTTAAGAGCTCAACGTGAAGAAGATAGGGTCTTGATCTACCCAGCATATTGAATCAATCTTATAATCCTCATCAAGTCAAGCCATTCACTAACTAAGCTGCCAAGACGTGCTTAGTGGAATTGTAGTGAGTTCATTGAGGTGCTGTAAATGGGTTCATAGCATGCTGGAAGAAGGATAATCTGTGTTCTGTAATTCCAACACTACAACAAACTTGGTGATACTTTGTGTTTCTACTTGAAGGACTGTTCTCTTCATCAAAAGCTTTTTGTTCTGAAGTAGCTCTCAGGATAGCTCATCTGCACAATGCAACGGACCAGTTTGTCTGCTAGGCTAGTAGTAGCATGTCTATAGAGCAAGCATTGGATCCCGGGTCATCTTCTTGGTGTGAAAGAAATAGGAAAGTGCCTGACACTGGTATGTCAAAGAAATTAGTGACAAACAACATGGATGCTGAAGTTTTATCTCATGATAAGCGTTAACTCTTGCTGGTGCTGTCTGTGCCCTGTGACTGTGAGTTAGGCGACCAGGTTATCTGAATTGGAAGAGTAACTGAGGTGCATACGACAATGATGCTGGGATGATGAGAAAGTAGCATGTACCAGCTCCGAGGAATTTGCAAGTTTCCACAACCTTGATCGGAGGCTCCACCTTTTTTTGGTTTTTTTCTTTGTTTTTTATTTTGGGTGCTGATAAAGGGCGAGTAACTATTGAAATGGATTACCCTCCATCTCTCAGGTTGAAATTCATAGTTAATTATTGTAAAGAAATGTAGAATGCTGTTGAAGTGTATTTCAAAGATGTGGCAAAATGTTTCCCTTTCGTGATTTTACATTTAGAGATGAATTATGCTGATTTTCAGGCCAATATGCCACCTAAGGAACATTTTTCTCTACAGGCGACTTATTTCTCAGTGAACAAGTATTTTTCGAGATT

Coding sequence (CDS)

ATGCACCTCCAGCTAAATAAACTTCTTGGTGCGCACAAGGCTTTGCTTTCTCATTACTCTTCTCTGATACGCCAGTGTTTAGTTGTTGGATCTGTTCACAATGCCAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTGACAGCAATACTTTTCTGGGCAATCATTGTCTTCAGCTATATACGCTATTTGGTCCTGTCCATGACGTATTGAAAGCATTTGATGGGATTAAAGATAAGAATATTATATCCTGGAATATATGCTTGAAGGGTATGTTTAGATTTGGCGACGTCGATGCTCCCCGTCACCTGTTCGATGTAATGCCTGAGAGGGACATTGTTTCTTGGAACACTATGATTTCTGGCTACGTTTCATCTGGATTTGCTAAGAGTGCAATGGGCATTTCTCTGGAAATGCAAAATGCTGGTTTTAGACCAAGCTGTCATAGATCAGGCTTTAGAGTATTGGCACTCAATCAGTTCTTTCTAATGAGAACCACTGAGCACTCACCTGATCAGTTCACTATATCAATGGTGATCAGTATCTGCTGTTGCCTCCAAGAGTTGGAACTGGTGCAGCTTTTTGAAGATACCAATCAATTGGATCCAGTTCTTTGTAATGTCATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATAAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAAAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAGTATCTGGAAATAATACATTAA

Protein sequence

MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELELVQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLELIIWEIEYGIDYEQYLEIIH

Homology

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BLAST of Cmc03g0065081 vs. NCBI nr
Match: XP_016899445.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 1050.0 bits (2714), Expect = 6.6e-303
Identity = 525/564 (93.09%), Postives = 527/564 (93.44%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI
Sbjct: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVI 180
           SGYVSSGFAKSAMGISLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVI
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVI 180

Query: 181 SICCCLQELEL------------------------------------VQLFEDTNQLDPV 240
           SICCCLQELEL                                    VQLFEDTNQLD V
Sbjct: 181 SICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKVAVQLFEDTNQLDRV 240

Query: 241 LCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLV 300
           LCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLV
Sbjct: 241 LCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLV 300

Query: 301 LKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEAL 360
           LKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEAL
Sbjct: 301 LKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEAL 360

Query: 361 HTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNL 420
           HTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNL
Sbjct: 361 HTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNL 420

Query: 421 LSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPY 480
           LSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPY
Sbjct: 421 LSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPY 480

Query: 481 SVLAQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFI 529
           SVLAQAYA+RCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLR+NFI
Sbjct: 481 SVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFI 540

[Close]

BLAST of Cmc03g0065081 vs. NCBI nr
Match: XP_008441580.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_008441581.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_016899443.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_016899444.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1017.3 bits (2629), Expect = 4.8e-293
Identity = 525/638 (82.29%), Postives = 527/638 (82.60%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI
Sbjct: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPS--------------------------------- 180
           SGYVSSGFAKSAMGISLEMQNAGFRPS                                 
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 -----------------------------------------CHRSGFRVLALNQFFLMRT 240
                                                    CHRSGFRVLALNQFFLMRT
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TEHSPDQFTISMVISICCCLQELEL----------------------------------- 300
           TEHSPDQFTISMVISICCCLQELEL                                   
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 -VQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
            VQLFEDTNQLD VLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV
Sbjct: 301 AVQLFEDTNQLDRVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360

Query: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
           FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
           IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480

Query: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 529
           VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA
Sbjct: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

[Close]

BLAST of Cmc03g0065081 vs. NCBI nr
Match: TYK23780.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1006.5 bits (2601), Expect = 8.4e-290
Identity = 519/632 (82.12%), Postives = 521/632 (82.44%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI
Sbjct: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPS--------------------------------- 180
           SGYVSSGFAKSAMGISLEMQNAGFRPS                                 
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 -----------------------------------------CHRSGFRVLALNQFFLMRT 240
                                                    CHRSGFRVLALNQFFLMRT
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TEHSPDQFTISMVISICCCLQELEL----------------------------------- 300
           TEHSPDQFTISMVISICCCLQELEL                                   
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 -VQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
            VQLFEDTNQLD VLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV
Sbjct: 301 AVQLFEDTNQLDRVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360

Query: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
           FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
           IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480

Query: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 523
           VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA
Sbjct: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

[Close]

BLAST of Cmc03g0065081 vs. NCBI nr
Match: XP_011657317.1 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743516.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743517.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743518.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743519.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743520.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >KAE8647194.1 hypothetical protein Csa_019030 [Cucumis sativus])

HSP 1 Score: 955.7 bits (2469), Expect = 1.7e-274
Identity = 494/638 (77.43%), Postives = 505/638 (79.15%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MHLQLNKLLGAHKALLSHYSSLIR+CLV+GSVHNAKTIH QLLKLGLDSNTFL N CLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           Y LFGPVHDVLK FDGIKDKNIISWNICLKGMFRFGDVD  RHLFDVMPERDIVSWNTMI
Sbjct: 61  YALFGPVHDVLKVFDGIKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMI 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPS--------------------------------- 180
           SGYVSSGF  SAMG+SLEMQNAGFRPS                                 
Sbjct: 121 SGYVSSGFGNSAMGVSLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 -----------------------------------------CHRSGFRVLALNQFFLMRT 240
                                                    CHRSGFRVLALNQFFLMRT
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TEHSPDQFTISMVISICCCLQELEL----------------------------------- 300
           TEHSPDQFTISMVISICCCLQELEL                                   
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 -VQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
            VQLFEDTNQ DPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSS+SV
Sbjct: 301 AVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISV 360

Query: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
           FTPVELGSQIHNLVLKLGF+ DVIV SSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
           IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAG VEEGL IFS MTYEHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHG 480

Query: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 529
           VVP NEHYSCVVNLLSRAGKFEEAVNIIKTT YQPTSTFWTSLLGVCAIHGDLKIIEKVA
Sbjct: 481 VVPRNEHYSCVVNLLSRAGKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

[Close]

BLAST of Cmc03g0065081 vs. NCBI nr
Match: XP_022989781.1 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucurbita maxima])

HSP 1 Score: 743.4 bits (1918), Expect = 1.3e-210
Identity = 391/634 (61.67%), Postives = 438/634 (69.09%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MH  L  L GAH+A  SHYS LI QCL   SVH AKTIHAQLLKLGL++NTFLGN CLQL
Sbjct: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           Y LFGPVH+  + F  IK+KNI+SWNICLKG+FRFG VD  R+LFD MPERDIVSWN M+
Sbjct: 61  YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPS--------------------------------- 180
           SG VSSGFA  AM + LEMQ+AGFRPS                                 
Sbjct: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180

Query: 181 -----------------------------------------CHRSGFRVLALNQFFLMRT 240
                                                    CHRSGFRVLALNQFFLMR 
Sbjct: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240

Query: 241 TEHSPDQFTISMVISICCCLQELEL----------------------------------- 300
           T HSPDQFT+S++IS+C  LQELEL                                   
Sbjct: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300

Query: 301 -VQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
             QLFE+TNQ D  LC+ MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSS+SV
Sbjct: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360

Query: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
           FTP++LGSQIHNLVLKLGFE D +V+SSLVDMYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420

Query: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
           IMGLV+NGKYFEAL T   LV EGV+ DRITLAGVLLAC +AGFV+EGL IFSTM  EHG
Sbjct: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480

Query: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 525
           VVP+NEHY+CVV+LLSRAGKFEEAVNII+    QPTSTFW SLL  CAIHGDL +IE+VA
Sbjct: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540

[Close]

BLAST of Cmc03g0065081 vs. ExPASy Swiss-Prot
Match: Q9LP03 (Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E58 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.7e-105
Identity = 220/607 (36.24%), Postives = 323/607 (53.21%), Query Frame = 0


Query: 18  HYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGI 77
           ++S L+ + L+  S   AK +HAQLL+ G    T+ GN CLQLY   G V + L+ FD I
Sbjct: 18  YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 77

Query: 78  KDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISL 137
            DKN I+WN+CLKG+F+ G ++    LFD MPERD+VSWNTMISG VS GF +  + +  
Sbjct: 78  PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 137

Query: 138 EMQNAGFRP--------------------------------------------------- 197
           +MQ    RP                                                   
Sbjct: 138 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 197

Query: 198 -----------------------SCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC 257
                                  SC  SG + +AL+QF+LMR  E  PD++T+SMV+SIC
Sbjct: 198 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 257

Query: 258 CCLQEL------------------------------------ELVQLFEDTNQLDPVLCN 317
             L+EL                                    + V+LF +  + D VLCN
Sbjct: 258 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 317

Query: 318 VMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKL 377
            MI S++WH    D++ LF+  + +++ P   T SSVLSS++    ++ G+ +H+LV+KL
Sbjct: 318 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKL 377

Query: 378 GFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTF 437
           GF+ D  VA+SL++MY K GS+D AM VF     +DLI WNT+IMGL  N +  E+L  F
Sbjct: 378 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 437

Query: 438 NKLVM-EGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLS 497
           N+L+M + + PDR+TL G+L+AC YAGFV EG+ IFS+M   HGV P NEHY+C++ LL 
Sbjct: 438 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 497

Query: 498 RAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSV 514
           R G   EA +I    P++P+S  W  +L      GD ++ E VA+ +++ EP+SS PY V
Sbjct: 498 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 557

[Close]

BLAST of Cmc03g0065081 vs. ExPASy Swiss-Prot
Match: Q9SKQ4 (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E48 PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.1e-70
Identity = 171/517 (33.08%), Postives = 265/517 (51.26%), Query Frame = 0


Query: 20  SSLIRQCLVVGSVHNAKTIHAQLLKLGLD-SNTFLGNHCLQLYTLFGPVHDVLKAFDGIK 79
           +SL++QC    S+   K IH  L   G    NT L NH + +Y   G   D  K FD + 
Sbjct: 50  ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109

Query: 80  DKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAM----- 139
            +N+ SWN  + G  + G +   R +FD MPERD+VSWNTM+ GY   G    A+     
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169

Query: 140 ----GISL-EMQNAGFRPSCHRSGFRVLALNQ---------FFL---------------- 199
               GI   E   AG   +C +S  R L LN+          FL                
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKS--RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 229

Query: 200 --MRTTEHSPDQFTI------SMVISICCCLQELELVQ-LFEDTNQLDPVLCNVMISSFA 259
             M + +   D+ T+      + +IS    L ++E  + LF +  + +PV    +I+ + 
Sbjct: 230 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 289

Query: 260 WHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVI 319
             G    ++ LF   +   + P   T SS L + +    +  G +IH  +++     + I
Sbjct: 290 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 349

Query: 320 VASSLVDMYAKVGSIDDAMKVF-IDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVME 379
           V SSL+DMY+K GS++ + +VF I     D + WNTMI  L  +G   +AL   + ++  
Sbjct: 350 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 409

Query: 380 GVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEE 439
            V P+R TL  +L ACS++G VEEGL  F +MT +HG+VP  EHY+C+++LL RAG F+E
Sbjct: 410 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 469

Query: 440 AVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAI 491
            +  I+  P++P    W ++LGVC IHG+ ++ +K A+ ++KL+P+SS PY +L+  YA 
Sbjct: 470 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 529

[Close]

BLAST of Cmc03g0065081 vs. ExPASy Swiss-Prot
Match: O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.1e-69
Identity = 152/499 (30.46%), Postives = 254/499 (50.90%), Query Frame = 0


Query: 7   KLLG-AHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFG 66
           +LLG A K   S Y +LI+ C    ++   K +H  +   G      + N  L++Y   G
Sbjct: 75  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134

Query: 67  PVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVS 126
            + D  K FD + ++++ SWN+ + G    G ++  R LFD M E+D  SW  M++GYV 
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194

Query: 127 SGFAKSAMGI-SLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEH----------SPDQF 186
               + A+ + SL  +    RP+       V A      +R  +             D+ 
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254

Query: 187 TISMVISI---CCCLQELELVQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLR 246
             S ++ +   C C+ E     +F+   + D V    MI  +     WR+   LF   + 
Sbjct: 255 LWSSLMDMYGKCGCIDEAR--NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 314

Query: 247 ENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDD 306
               P + T + VL++ +  T  ELG Q+H  + ++GF+     +SSLVDMY K G+I+ 
Sbjct: 315 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 374

Query: 307 AMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSY 366
           A  V    P  DL+SW ++I G   NG+  EAL  F+ L+  G  PD +T   VL AC++
Sbjct: 375 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 434

Query: 367 AGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWT 426
           AG VE+GL  F ++T +H +  +++HY+C+V+LL+R+G+FE+  ++I   P +P+   W 
Sbjct: 435 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 494

Query: 427 SLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAIRCQWESMVRVKNTWENIA 486
           S+LG C+ +G++ + E+ A+ + K+EP++ + Y  +A  YA   +WE   +++   + I 
Sbjct: 495 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 554

Query: 487 AQKVKACSWIVTKDCAYAF 491
             K    SW   K   + F
Sbjct: 555 VTKRPGSSWTEIKRKRHVF 571

[Close]

BLAST of Cmc03g0065081 vs. ExPASy Swiss-Prot
Match: Q9CAA8 (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.9e-69
Identity = 156/496 (31.45%), Postives = 253/496 (51.01%), Query Frame = 0


Query: 30  GSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICL 89
           G V   K IH Q++KLG +S   +G+  L +Y   G + D  K F G+ D+N + +N  +
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212

Query: 90  KGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFR---- 149
            G+   G ++    LF  M E+D VSW  MI G   +G AK A+    EM+  G +    
Sbjct: 213 GGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 272

Query: 150 ------PSCHRSGFRVLALNQ-----FFLMRTTEHSPDQFTISMVISICCCLQELELVQL 209
                 P+C   G    A+N+       ++RT          +++   C C        +
Sbjct: 273 PFGSVLPACGGLG----AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 332

Query: 210 FEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPV 269
           F+   Q + V    M+  +   G   +++ +F+   R  + P   TL   +S+ +  + +
Sbjct: 333 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 392

Query: 270 ELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGL 329
           E GSQ H   +  G    V V++SLV +Y K G IDD+ ++F +M  RD +SW  M+   
Sbjct: 393 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 452

Query: 330 VDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPS 389
              G+  E +  F+K+V  G+ PD +TL GV+ ACS AG VE+G   F  MT E+G+VPS
Sbjct: 453 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 512

Query: 390 NEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVM 449
             HYSC+++L SR+G+ EEA+  I   P+ P +  WT+LL  C   G+L+I +  AE ++
Sbjct: 513 IGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI 572

Query: 450 KLEPQSSLPYSVLAQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFE-DD 509
           +L+P     Y++L+  YA + +W+S+ +++        +K    SWI  K   ++F  DD
Sbjct: 573 ELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADD 632

[Close]

BLAST of Cmc03g0065081 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.8e-67
Identity = 153/524 (29.20%), Postives = 266/524 (50.76%), Query Frame = 0


Query: 19  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIK 78
           ++S++  C  +  ++    +H+ + K    S+ ++G+  + +Y+  G V+D  + FD + 
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214

Query: 79  DKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLE 138
           D+N++SWN  +    + G       +F +M E  +      ++  +S+  + SA+ +  E
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274

Query: 139 MQNAGFRPSCHRSGFRVLALNQFFLM-------RTTEHSPDQFTISMVISICCCLQELEL 198
           +     +    R+   ++  N F  M       +      D   I  VI+    +    +
Sbjct: 275 VHGRVVKNDKLRND--IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 334

Query: 199 VQ-------LFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSV 258
                    +F    + + V  N +I+ +  +G   +++ LF    RE++ P   + +++
Sbjct: 335 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 394

Query: 259 LSSVSVFTPVELGSQIHNLVLKLGFEF------DVIVASSLVDMYAKVGSIDDAMKVFID 318
           L + +    + LG Q H  VLK GF+F      D+ V +SL+DMY K G +++   VF  
Sbjct: 395 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 454

Query: 319 MPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEG 378
           M  RD +SWN MI+G   NG   EAL  F +++  G  PD IT+ GVL AC +AGFVEEG
Sbjct: 455 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 514

Query: 379 LGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCA 438
              FS+MT + GV P  +HY+C+V+LL RAG  EEA ++I+  P QP S  W SLL  C 
Sbjct: 515 RHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 574

Query: 439 IHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAIRCQWESMVRVKNTWENIAAQKVKAC 498
           +H ++ + + VAE ++++EP +S PY +L+  YA   +WE ++ V+ +       K   C
Sbjct: 575 VHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGC 634

Query: 499 SWIVTKDCAYAFEDDQLQLLLRKNFISVLELIIWEIEYGIDYEQ 523
           SWI  +   + F         +K   S+L+++I E+    D+ +
Sbjct: 635 SWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676

[Close]

BLAST of Cmc03g0065081 vs. ExPASy TrEMBL
Match: A0A1S4DUP9 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485665 PE=4 SV=1)

HSP 1 Score: 1050.0 bits (2714), Expect = 3.2e-303
Identity = 525/564 (93.09%), Postives = 527/564 (93.44%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI
Sbjct: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVI 180
           SGYVSSGFAKSAMGISLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVI
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVI 180

Query: 181 SICCCLQELEL------------------------------------VQLFEDTNQLDPV 240
           SICCCLQELEL                                    VQLFEDTNQLD V
Sbjct: 181 SICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKVAVQLFEDTNQLDRV 240

Query: 241 LCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLV 300
           LCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLV
Sbjct: 241 LCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLV 300

Query: 301 LKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEAL 360
           LKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEAL
Sbjct: 301 LKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEAL 360

Query: 361 HTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNL 420
           HTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNL
Sbjct: 361 HTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNL 420

Query: 421 LSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPY 480
           LSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPY
Sbjct: 421 LSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPY 480

Query: 481 SVLAQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFI 529
           SVLAQAYA+RCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLR+NFI
Sbjct: 481 SVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFI 540

[Close]

BLAST of Cmc03g0065081 vs. ExPASy TrEMBL
Match: A0A1S3B3Q8 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485665 PE=4 SV=1)

HSP 1 Score: 1017.3 bits (2629), Expect = 2.3e-293
Identity = 525/638 (82.29%), Postives = 527/638 (82.60%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI
Sbjct: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPS--------------------------------- 180
           SGYVSSGFAKSAMGISLEMQNAGFRPS                                 
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 -----------------------------------------CHRSGFRVLALNQFFLMRT 240
                                                    CHRSGFRVLALNQFFLMRT
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TEHSPDQFTISMVISICCCLQELEL----------------------------------- 300
           TEHSPDQFTISMVISICCCLQELEL                                   
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 -VQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
            VQLFEDTNQLD VLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV
Sbjct: 301 AVQLFEDTNQLDRVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360

Query: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
           FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
           IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480

Query: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 529
           VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA
Sbjct: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

[Close]

BLAST of Cmc03g0065081 vs. ExPASy TrEMBL
Match: A0A5D3DK49 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001070 PE=4 SV=1)

HSP 1 Score: 1006.5 bits (2601), Expect = 4.1e-290
Identity = 519/632 (82.12%), Postives = 521/632 (82.44%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL
Sbjct: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI
Sbjct: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPS--------------------------------- 180
           SGYVSSGFAKSAMGISLEMQNAGFRPS                                 
Sbjct: 121 SGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSS 180

Query: 181 -----------------------------------------CHRSGFRVLALNQFFLMRT 240
                                                    CHRSGFRVLALNQFFLMRT
Sbjct: 181 MVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRT 240

Query: 241 TEHSPDQFTISMVISICCCLQELEL----------------------------------- 300
           TEHSPDQFTISMVISICCCLQELEL                                   
Sbjct: 241 TEHSPDQFTISMVISICCCLQELELGKQIFAFCIKMGFTSNSIVLSATIDLFSKCDSLKV 300

Query: 301 -VQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
            VQLFEDTNQLD VLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV
Sbjct: 301 AVQLFEDTNQLDRVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360

Query: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
           FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM
Sbjct: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420

Query: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
           IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG
Sbjct: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480

Query: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 523
           VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA
Sbjct: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 540

[Close]

BLAST of Cmc03g0065081 vs. ExPASy TrEMBL
Match: A0A6J1JL44 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486863 PE=4 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 6.4e-211
Identity = 391/634 (61.67%), Postives = 438/634 (69.09%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MH  L  L GAH+A  SHYS LI QCL   SVH AKTIHAQLLKLGL++NTFLGN CLQL
Sbjct: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASSSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           Y LFGPVH+  + F  IK+KNI+SWNICLKG+FRFG VD  R+LFD MPERDIVSWN M+
Sbjct: 61  YALFGPVHEFFRVFGDIKEKNIVSWNICLKGLFRFGYVDGARNLFDEMPERDIVSWNCMM 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPS--------------------------------- 180
           SG VSSGFA  AM + LEMQ+AGFRPS                                 
Sbjct: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVVSCPSHGKQIHGSMIRSGIDVSN 180

Query: 181 -----------------------------------------CHRSGFRVLALNQFFLMRT 240
                                                    CHRSGFRVLALNQFFLMR 
Sbjct: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRA 240

Query: 241 TEHSPDQFTISMVISICCCLQELEL----------------------------------- 300
           T HSPDQFT+S++IS+C  LQELEL                                   
Sbjct: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLGFCFKMGFTSNSIVLSAAIDLFSKCNSLRD 300

Query: 301 -VQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
             QLFE+TNQ D  LC+ MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSS+SV
Sbjct: 301 AAQLFEETNQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360

Query: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
           FTP++LGSQIHNLVLKLGFE D +V+SSLVDMYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPLDLGSQIHNLVLKLGFESDTVVSSSLVDMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420

Query: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
           IMGLV+NGKYFEAL T   LV EGV+ DRITLAGVLLAC +AGFV+EGL IFSTM  EHG
Sbjct: 421 IMGLVNNGKYFEALGTLKNLVKEGVVADRITLAGVLLACRHAGFVDEGLNIFSTMENEHG 480

Query: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 525
           VVP+NEHY+CVV+LLSRAGKFEEAVNII+    QPTSTFW SLL  CAIHGDL +IE+VA
Sbjct: 481 VVPTNEHYTCVVDLLSRAGKFEEAVNIIEKMSCQPTSTFWISLLDACAIHGDLNVIERVA 540

[Close]

BLAST of Cmc03g0065081 vs. ExPASy TrEMBL
Match: A0A6J1GNQ4 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456079 PE=4 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 4.2e-210
Identity = 390/634 (61.51%), Postives = 439/634 (69.24%), Query Frame = 0


Query: 1   MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQL 60
           MH  L  L GAH+A  SHYS LI QCL   SVH AKTIHAQLLKLGL++NTFLGN CLQL
Sbjct: 1   MHFLLKNLRGAHRASFSHYSYLIDQCLASRSVHIAKTIHAQLLKLGLNNNTFLGNRCLQL 60

Query: 61  YTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMI 120
           Y LFGPVHD  + F  IK+KNI+SWNICLKG+FRFG V+  R+LFD MPERDIVSWN M+
Sbjct: 61  YVLFGPVHDFFRVFGDIKEKNIVSWNICLKGLFRFGYVNGARNLFDEMPERDIVSWNCMM 120

Query: 121 SGYVSSGFAKSAMGISLEMQNAGFRPS--------------------------------- 180
           SG VSSGFA  AM + LEMQ+AGFRPS                                 
Sbjct: 121 SGCVSSGFANKAMDVFLEMQDAGFRPSEYTFSILLSVMSCPSHGKQIHGSMIRSGVDVSN 180

Query: 181 -----------------------------------------CHRSGFRVLALNQFFLMRT 240
                                                    CHRSGF VLALNQFFLMR 
Sbjct: 181 VVLGNSLIDMYGKFGLVDYMFVMFYSMEKVDVISWNSLILGCHRSGFSVLALNQFFLMRA 240

Query: 241 TEHSPDQFTISMVISICCCLQELEL----------------------------------- 300
           T HSPDQFT+S++IS+C  LQELEL                                   
Sbjct: 241 TGHSPDQFTVSIMISLCSFLQELELGKQFLAFCFKMGFTSNSIILSAAIDLFSKCNSLRD 300

Query: 301 -VQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSV 360
            +QLFE+ NQ D  LC+ MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSS+SV
Sbjct: 301 AMQLFEEANQWDQALCDAMISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISV 360

Query: 361 FTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTM 420
           FTP++LGSQIHNLVLKLGFE D +V SSLV+MYAKVG ID+AMKVF DMP RDLISWNTM
Sbjct: 361 FTPLDLGSQIHNLVLKLGFESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTM 420

Query: 421 IMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHG 480
           IMGLV+NGKYFEAL T   LV EGV+ DRITLAGVLLACS+AGFV+EGL IFSTM  +HG
Sbjct: 421 IMGLVNNGKYFEALGTLENLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHG 480

Query: 481 VVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVA 525
           VVP+NEHY+CVV+LLSRAGKF+EAVNII+TT  QPTSTFW SLL  CAIHGD+  IE+VA
Sbjct: 481 VVPTNEHYTCVVDLLSRAGKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVA 540

[Close]

BLAST of Cmc03g0065081 vs. TAIR 10
Match: AT1G43980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 384.0 bits (985), Expect = 1.9e-106
Identity = 220/607 (36.24%), Postives = 323/607 (53.21%), Query Frame = 0


Query: 18  HYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGI 77
           ++S L+ + L+  S   AK +HAQLL+ G    T+ GN CLQLY   G V + L+ FD I
Sbjct: 6   YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 65

Query: 78  KDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISL 137
            DKN I+WN+CLKG+F+ G ++    LFD MPERD+VSWNTMISG VS GF +  + +  
Sbjct: 66  PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125

Query: 138 EMQNAGFRP--------------------------------------------------- 197
           +MQ    RP                                                   
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185

Query: 198 -----------------------SCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC 257
                                  SC  SG + +AL+QF+LMR  E  PD++T+SMV+SIC
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245

Query: 258 CCLQEL------------------------------------ELVQLFEDTNQLDPVLCN 317
             L+EL                                    + V+LF +  + D VLCN
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305

Query: 318 VMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKL 377
            MI S++WH    D++ LF+  + +++ P   T SSVLSS++    ++ G+ +H+LV+KL
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKL 365

Query: 378 GFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTF 437
           GF+ D  VA+SL++MY K GS+D AM VF     +DLI WNT+IMGL  N +  E+L  F
Sbjct: 366 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 425

Query: 438 NKLVM-EGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLS 497
           N+L+M + + PDR+TL G+L+AC YAGFV EG+ IFS+M   HGV P NEHY+C++ LL 
Sbjct: 426 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 485

Query: 498 RAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSV 514
           R G   EA +I    P++P+S  W  +L      GD ++ E VA+ +++ EP+SS PY V
Sbjct: 486 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 545

[Close]

BLAST of Cmc03g0065081 vs. TAIR 10
Match: AT2G21090.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 268.1 bits (684), Expect = 1.5e-71
Identity = 171/517 (33.08%), Postives = 265/517 (51.26%), Query Frame = 0


Query: 20  SSLIRQCLVVGSVHNAKTIHAQLLKLGLD-SNTFLGNHCLQLYTLFGPVHDVLKAFDGIK 79
           +SL++QC    S+   K IH  L   G    NT L NH + +Y   G   D  K FD + 
Sbjct: 50  ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109

Query: 80  DKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAM----- 139
            +N+ SWN  + G  + G +   R +FD MPERD+VSWNTM+ GY   G    A+     
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169

Query: 140 ----GISL-EMQNAGFRPSCHRSGFRVLALNQ---------FFL---------------- 199
               GI   E   AG   +C +S  R L LN+          FL                
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKS--RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 229

Query: 200 --MRTTEHSPDQFTI------SMVISICCCLQELELVQ-LFEDTNQLDPVLCNVMISSFA 259
             M + +   D+ T+      + +IS    L ++E  + LF +  + +PV    +I+ + 
Sbjct: 230 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 289

Query: 260 WHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVI 319
             G    ++ LF   +   + P   T SS L + +    +  G +IH  +++     + I
Sbjct: 290 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 349

Query: 320 VASSLVDMYAKVGSIDDAMKVF-IDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVME 379
           V SSL+DMY+K GS++ + +VF I     D + WNTMI  L  +G   +AL   + ++  
Sbjct: 350 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 409

Query: 380 GVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEE 439
            V P+R TL  +L ACS++G VEEGL  F +MT +HG+VP  EHY+C+++LL RAG F+E
Sbjct: 410 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 469

Query: 440 AVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAI 491
            +  I+  P++P    W ++LGVC IHG+ ++ +K A+ ++KL+P+SS PY +L+  YA 
Sbjct: 470 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 529

[Close]

BLAST of Cmc03g0065081 vs. TAIR 10
Match: AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 264.2 bits (674), Expect = 2.2e-70
Identity = 152/499 (30.46%), Postives = 254/499 (50.90%), Query Frame = 0


Query: 7   KLLG-AHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFG 66
           +LLG A K   S Y +LI+ C    ++   K +H  +   G      + N  L++Y   G
Sbjct: 75  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134

Query: 67  PVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVS 126
            + D  K FD + ++++ SWN+ + G    G ++  R LFD M E+D  SW  M++GYV 
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194

Query: 127 SGFAKSAMGI-SLEMQNAGFRPSCHRSGFRVLALNQFFLMRTTEH----------SPDQF 186
               + A+ + SL  +    RP+       V A      +R  +             D+ 
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254

Query: 187 TISMVISI---CCCLQELELVQLFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLR 246
             S ++ +   C C+ E     +F+   + D V    MI  +     WR+   LF   + 
Sbjct: 255 LWSSLMDMYGKCGCIDEAR--NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 314

Query: 247 ENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDD 306
               P + T + VL++ +  T  ELG Q+H  + ++GF+     +SSLVDMY K G+I+ 
Sbjct: 315 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 374

Query: 307 AMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSY 366
           A  V    P  DL+SW ++I G   NG+  EAL  F+ L+  G  PD +T   VL AC++
Sbjct: 375 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 434

Query: 367 AGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWT 426
           AG VE+GL  F ++T +H +  +++HY+C+V+LL+R+G+FE+  ++I   P +P+   W 
Sbjct: 435 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 494

Query: 427 SLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAIRCQWESMVRVKNTWENIA 486
           S+LG C+ +G++ + E+ A+ + K+EP++ + Y  +A  YA   +WE   +++   + I 
Sbjct: 495 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 554

Query: 487 AQKVKACSWIVTKDCAYAF 491
             K    SW   K   + F
Sbjct: 555 VTKRPGSSWTEIKRKRHVF 571

[Close]

BLAST of Cmc03g0065081 vs. TAIR 10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 263.1 bits (671), Expect = 4.9e-70
Identity = 156/496 (31.45%), Postives = 253/496 (51.01%), Query Frame = 0


Query: 30  GSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICL 89
           G V   K IH Q++KLG +S   +G+  L +Y   G + D  K F G+ D+N + +N  +
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212

Query: 90  KGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFR---- 149
            G+   G ++    LF  M E+D VSW  MI G   +G AK A+    EM+  G +    
Sbjct: 213 GGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 272

Query: 150 ------PSCHRSGFRVLALNQ-----FFLMRTTEHSPDQFTISMVISICCCLQELELVQL 209
                 P+C   G    A+N+       ++RT          +++   C C        +
Sbjct: 273 PFGSVLPACGGLG----AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 332

Query: 210 FEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPV 269
           F+   Q + V    M+  +   G   +++ +F+   R  + P   TL   +S+ +  + +
Sbjct: 333 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 392

Query: 270 ELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGL 329
           E GSQ H   +  G    V V++SLV +Y K G IDD+ ++F +M  RD +SW  M+   
Sbjct: 393 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 452

Query: 330 VDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPS 389
              G+  E +  F+K+V  G+ PD +TL GV+ ACS AG VE+G   F  MT E+G+VPS
Sbjct: 453 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 512

Query: 390 NEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVM 449
             HYSC+++L SR+G+ EEA+  I   P+ P +  WT+LL  C   G+L+I +  AE ++
Sbjct: 513 IGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI 572

Query: 450 KLEPQSSLPYSVLAQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFE-DD 509
           +L+P     Y++L+  YA + +W+S+ +++        +K    SWI  K   ++F  DD
Sbjct: 573 ELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADD 632

[Close]

BLAST of Cmc03g0065081 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 257.3 bits (656), Expect = 2.7e-68
Identity = 153/524 (29.20%), Postives = 266/524 (50.76%), Query Frame = 0


Query: 19  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIK 78
           ++S++  C  +  ++    +H+ + K    S+ ++G+  + +Y+  G V+D  + FD + 
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214

Query: 79  DKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLE 138
           D+N++SWN  +    + G       +F +M E  +      ++  +S+  + SA+ +  E
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274

Query: 139 MQNAGFRPSCHRSGFRVLALNQFFLM-------RTTEHSPDQFTISMVISICCCLQELEL 198
           +     +    R+   ++  N F  M       +      D   I  VI+    +    +
Sbjct: 275 VHGRVVKNDKLRND--IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 334

Query: 199 VQ-------LFEDTNQLDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSV 258
                    +F    + + V  N +I+ +  +G   +++ LF    RE++ P   + +++
Sbjct: 335 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 394

Query: 259 LSSVSVFTPVELGSQIHNLVLKLGFEF------DVIVASSLVDMYAKVGSIDDAMKVFID 318
           L + +    + LG Q H  VLK GF+F      D+ V +SL+DMY K G +++   VF  
Sbjct: 395 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 454

Query: 319 MPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEG 378
           M  RD +SWN MI+G   NG   EAL  F +++  G  PD IT+ GVL AC +AGFVEEG
Sbjct: 455 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 514

Query: 379 LGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCA 438
              FS+MT + GV P  +HY+C+V+LL RAG  EEA ++I+  P QP S  W SLL  C 
Sbjct: 515 RHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 574

Query: 439 IHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAIRCQWESMVRVKNTWENIAAQKVKAC 498
           +H ++ + + VAE ++++EP +S PY +L+  YA   +WE ++ V+ +       K   C
Sbjct: 575 VHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGC 634

Query: 499 SWIVTKDCAYAFEDDQLQLLLRKNFISVLELIIWEIEYGIDYEQ 523
           SWI  +   + F         +K   S+L+++I E+    D+ +
Sbjct: 635 SWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676

The following BLAST results are available for this feature:

BLAST of Cmc03g0065081 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899445.1	6.6e-303	93.09	PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ...	[more]
XP_008441580.1	4.8e-293	82.29	PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ...	[more]
TYK23780.1	8.4e-290	82.12	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_011657317.1	1.7e-274	77.43	pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sa...	[more]
XP_022989781.1	1.3e-210	61.67	pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucurbita ...	[more]

BLAST of Cmc03g0065081 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LP03	2.7e-105	36.24	Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidop...	[more]
Q9SKQ4	2.1e-70	33.08	Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana OX...	[more]
O23169	3.1e-69	30.46	Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX...	[more]
Q9CAA8	6.9e-69	31.45	Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th...	[more]
Q9SIT7	3.8e-67	29.20	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cmc03g0065081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUP9	3.2e-303	93.09	pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 ...	[more]
A0A1S3B3Q8	2.3e-293	82.29	pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 ...	[more]
A0A5D3DK49	4.1e-290	82.12	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1JL44	6.4e-211	61.67	pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Cucurbit...	[more]
A0A6J1GNQ4	4.2e-210	61.51	pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Cucurbit...	[more]

BLAST of Cmc03g0065081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43980.1	1.9e-106	36.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G21090.1	1.5e-71	33.08	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT4G37170.1	2.2e-70	30.46	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G68930.1	4.9e-70	31.45	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G13600.1	2.7e-68	29.20	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 254..352 e-value: 2.3E-18 score: 68.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 150..251 e-value: 4.5E-7 score: 31.6 coord: 13..149 e-value: 4.6E-17 score: 64.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 353..501 e-value: 3.2E-11 score: 45.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 377..399 e-value: 0.19 score: 12.1 coord: 83..113 e-value: 0.39 score: 11.1 coord: 204..226 e-value: 0.13 score: 12.6 coord: 114..144 e-value: 1.6E-4 score: 21.7 coord: 305..335 e-value: 2.1E-5 score: 24.4 coord: 277..300 e-value: 0.0091 score: 16.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 305..338 e-value: 1.4E-5 score: 23.0 coord: 114..148 e-value: 3.6E-5 score: 21.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 303..337 score: 10.709248
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 202..236 score: 8.834866
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 112..146 score: 11.246351
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 148..190 coord: 7..148
None	No IPR available	PANTHER	PTHR24015:SF1740	OS03G0435200 PROTEIN	coord: 148..190
None	No IPR available	PANTHER	PTHR24015:SF1740	OS03G0435200 PROTEIN	coord: 7..148 coord: 190..517
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 190..517

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0065081.1	Cmc03g0065081.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding