Cmc03g0064951 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0064951
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr03: 6183861 .. 6184355 (-)
RNA-Seq Expression	Cmc03g0064951
Synteny	Cmc03g0064951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAATGACAAATCAGCAAATGCAGTTGGCACCGAAGATGTACACTTGAAGAACAGAAATGGTTCTAGGCTGATTTTGAAAAATTTTAAACATATTCCCGACATTCGTATGAACTTGTTCTCTACAGGTAAGCTTGATGATGAATGTTTCTGTAATACCTTCGATAATGGCATATGGAAGCTTACTAAAGGTTCTATGGTTATAGTAAAAGGACAAAAAATTTTATCACTGTACTACATGGATGCTAAAATCATGGATTCTGATATAAATACAGTAAATGATGAAGCGAATGTTGAGCTTTGGCATGAAAGACTTAGTCATATGAGTGAGAAAGGTTTAAAGATTTTAACCAAGAAAAATCATCTTTCTGGTTTAAAGAGTGCACCTCTAAAACGGTGTCTTCATTGTTTGCCGGTAAAGCAAACGAGGGTTACCTTTAAAATCATCTTAGCATTCAAGAAAGCCAAATGTACTAGAGTTGGTAAATTCTGA

mRNA sequence

ATGGGCAATGACAAATCAGCAAATGCAGTTGGCACCGAAGATGTACACTTGAAGAACAGAAATGGTTCTAGGCTGATTTTGAAAAATTTTAAACATATTCCCGACATTCGTATGAACTTGTTCTCTACAGGTAAGCTTGATGATGAATGTTTCTGTAATACCTTCGATAATGGCATATGGAAGCTTACTAAAGGTTCTATGGTTATAGTAAAAGGACAAAAAATTTTATCACTGTACTACATGGATGCTAAAATCATGGATTCTGATATAAATACAGTAAATGATGAAGCGAATGTTGAGCTTTGGCATGAAAGACTTAGTCATATGAGTGAGAAAGGTTTAAAGATTTTAACCAAGAAAAATCATCTTTCTGGTTTAAAGAGTGCACCTCTAAAACGGTGTCTTCATTGTTTGCCGGTAAAGCAAACGAGGGTTACCTTTAAAATCATCTTAGCATTCAAGAAAGCCAAATGTACTAGAGTTGGTAAATTCTGA

Coding sequence (CDS)

ATGGGCAATGACAAATCAGCAAATGCAGTTGGCACCGAAGATGTACACTTGAAGAACAGAAATGGTTCTAGGCTGATTTTGAAAAATTTTAAACATATTCCCGACATTCGTATGAACTTGTTCTCTACAGGTAAGCTTGATGATGAATGTTTCTGTAATACCTTCGATAATGGCATATGGAAGCTTACTAAAGGTTCTATGGTTATAGTAAAAGGACAAAAAATTTTATCACTGTACTACATGGATGCTAAAATCATGGATTCTGATATAAATACAGTAAATGATGAAGCGAATGTTGAGCTTTGGCATGAAAGACTTAGTCATATGAGTGAGAAAGGTTTAAAGATTTTAACCAAGAAAAATCATCTTTCTGGTTTAAAGAGTGCACCTCTAAAACGGTGTCTTCATTGTTTGCCGGTAAAGCAAACGAGGGTTACCTTTAAAATCATCTTAGCATTCAAGAAAGCCAAATGTACTAGAGTTGGTAAATTCTGA

Protein sequence

MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIWKLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKKNHLSGLKSAPLKRCLHCLPVKQTRVTFKIILAFKKAKCTRVGKF

Homology

[Close]

BLAST of Cmc03g0064951 vs. NCBI nr
Match: KAA0040427.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 5.8e-64
Identity = 125/148 (84.46%), Postives = 127/148 (85.81%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND   N VG  DVHLKNRNGSRLILKN KHIPDI MNL STGKLDDE FCNTFDNGIW
Sbjct: 243 MGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLISTGKLDDEGFCNTFDNGIW 302

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLTKGSMVI  GQK  SLYYMDAKI+D DINTVNDEANVELWH+RLSHMSEKGLKILTKK
Sbjct: 303 KLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELWHKRLSHMSEKGLKILTKK 362

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
           NHL  LKS PLKRC HCL  KQTRVTFK
Sbjct: 363 NHLHDLKSTPLKRCPHCLAGKQTRVTFK 390

[Close]

BLAST of Cmc03g0064951 vs. NCBI nr
Match: TYJ98688.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 5.8e-64
Identity = 125/148 (84.46%), Postives = 127/148 (85.81%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND   N VG  DVHLKNRNGSRLILKN KHIPDI MNL STGKLDDE FCNTFDNGIW
Sbjct: 243 MGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLISTGKLDDEGFCNTFDNGIW 302

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLTKGSMVI  GQK  SLYYMDAKI+D DINTVNDEANVELWH+RLSHMSEKGLKILTKK
Sbjct: 303 KLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELWHKRLSHMSEKGLKILTKK 362

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
           NHL  LKS PLKRC HCL  KQTRVTFK
Sbjct: 363 NHLHDLKSTPLKRCPHCLAGKQTRVTFK 390

[Close]

BLAST of Cmc03g0064951 vs. NCBI nr
Match: KAA0047570.1 (putative retrotransposon [Cucumis melo var. makuwa] >TYK14964.1 putative retrotransposon [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59
Identity = 123/159 (77.36%), Postives = 128/159 (80.50%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND SAN VG  DVHL NRNGSRLILKN KHI DIRMNL STGKLDDE FCNTFDNGIW
Sbjct: 191 MGNDGSANVVGIGDVHL-NRNGSRLILKNVKHISDIRMNLISTGKLDDEGFCNTFDNGIW 250

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLTKGS+VI +G K  SLYYMDAKI+DSDINTVNDE N+ELWH+RLSHMSEKGLKILTKK
Sbjct: 251 KLTKGSIVIARGHKFSSLYYMDAKIIDSDINTVNDEVNIELWHKRLSHMSEKGLKILTKK 310

Query: 121 -----------NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
                      NHL  LKS PLKRC HCL  KQTRVTFK
Sbjct: 311 NHLPDLKSTPLNHLPDLKSTPLKRCPHCLAGKQTRVTFK 348

[Close]

BLAST of Cmc03g0064951 vs. NCBI nr
Match: KAA0065636.1 (putative retrotransposon [Cucumis melo var. makuwa] >TYK07205.1 putative retrotransposon [Cucumis melo var. makuwa])

HSP 1 Score: 227.3 bits (578), Expect = 9.9e-56
Identity = 117/148 (79.05%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND S NAVG   VHLKN NGSRLILKN KHIPDIRMNL ST KLD+E FCNTFDNGIW
Sbjct: 160 MGNDGSTNAVGIGGVHLKNINGSRLILKNVKHIPDIRMNLISTSKLDNEGFCNTFDNGIW 219

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLT+G MVI KGQKI  LYY+DAKI+DSDINTVN EANVELW  RLSHMSEKGLKIL KK
Sbjct: 220 KLTEGFMVIAKGQKISLLYYVDAKIIDSDINTVNGEANVELWQMRLSHMSEKGLKILIKK 279

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
           NHL  LKSAPLK   H L  KQT VTFK
Sbjct: 280 NHLPDLKSAPLKWFAHYLAGKQTSVTFK 307

[Close]

BLAST of Cmc03g0064951 vs. NCBI nr
Match: RVW24680.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-48
Identity = 100/155 (64.52%), Postives = 114/155 (73.55%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND SA A+G  DV L+  NG+ L LKN KHIPDIRMNL STGKLDDE FCNTF +  W
Sbjct: 219 MGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQW 278

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLT+GSMVI KG K  SLY M A+++DS IN V+D++  ELWH RL HMSEKGL IL KK
Sbjct: 279 KLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKK 338

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFKIILAFKK 156
           N LSG+K   LKRC HCL  KQTRV FK +   +K
Sbjct: 339 NLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRK 373

[Close]

BLAST of Cmc03g0064951 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29
Identity = 66/148 (44.59%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGN   +   G  D+ +K   G  L+LK+ +H+PD+RMNL S   LD + + + F N  W
Sbjct: 324 MGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKW 383

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           +LTKGS+VI KG    +LY  +A+I   ++N   DE +V+LWH+R+ HMSEKGL+IL KK
Sbjct: 384 RLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKK 443

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
           + +S  K   +K C +CL  KQ RV+F+
Sbjct: 444 SLISYAKGTTVKPCDYCLFGKQHRVSFQ 471

[Close]

BLAST of Cmc03g0064951 vs. ExPASy Swiss-Prot
Match: P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-10
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 58  GIWKLTKGSMVIVKGQKILSLYYMDAKIMDSDIN---TVNDEANVELWHERLSHMSEKGL 117
           G+ K+ KG   I+KG +  SLY +   +   + N   T  DE    LWH RL+HMS++G+
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDE--TRLWHSRLAHMSQRGM 86

Query: 118 KILTKKNHLSGLKSAPLKRCLHCLPVKQTRVTF 148
           ++L KK  L   K + LK C  C+  K  RV F
Sbjct: 87  ELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNF 117

[Close]

BLAST of Cmc03g0064951 vs. ExPASy TrEMBL
Match: A0A5D3BKF7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00180 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 125/148 (84.46%), Postives = 127/148 (85.81%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND   N VG  DVHLKNRNGSRLILKN KHIPDI MNL STGKLDDE FCNTFDNGIW
Sbjct: 243 MGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLISTGKLDDEGFCNTFDNGIW 302

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLTKGSMVI  GQK  SLYYMDAKI+D DINTVNDEANVELWH+RLSHMSEKGLKILTKK
Sbjct: 303 KLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELWHKRLSHMSEKGLKILTKK 362

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
           NHL  LKS PLKRC HCL  KQTRVTFK
Sbjct: 363 NHLHDLKSTPLKRCPHCLAGKQTRVTFK 390

[Close]

BLAST of Cmc03g0064951 vs. ExPASy TrEMBL
Match: A0A5A7TFU1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00580 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 125/148 (84.46%), Postives = 127/148 (85.81%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND   N VG  DVHLKNRNGSRLILKN KHIPDI MNL STGKLDDE FCNTFDNGIW
Sbjct: 243 MGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLISTGKLDDEGFCNTFDNGIW 302

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLTKGSMVI  GQK  SLYYMDAKI+D DINTVNDEANVELWH+RLSHMSEKGLKILTKK
Sbjct: 303 KLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELWHKRLSHMSEKGLKILTKK 362

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
           NHL  LKS PLKRC HCL  KQTRVTFK
Sbjct: 363 NHLHDLKSTPLKRCPHCLAGKQTRVTFK 390

[Close]

BLAST of Cmc03g0064951 vs. ExPASy TrEMBL
Match: A0A5D3CVK2 (Putative retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00140 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.3e-60
Identity = 123/159 (77.36%), Postives = 128/159 (80.50%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND SAN VG  DVHL NRNGSRLILKN KHI DIRMNL STGKLDDE FCNTFDNGIW
Sbjct: 191 MGNDGSANVVGIGDVHL-NRNGSRLILKNVKHISDIRMNLISTGKLDDEGFCNTFDNGIW 250

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLTKGS+VI +G K  SLYYMDAKI+DSDINTVNDE N+ELWH+RLSHMSEKGLKILTKK
Sbjct: 251 KLTKGSIVIARGHKFSSLYYMDAKIIDSDINTVNDEVNIELWHKRLSHMSEKGLKILTKK 310

Query: 121 -----------NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
                      NHL  LKS PLKRC HCL  KQTRVTFK
Sbjct: 311 NHLPDLKSTPLNHLPDLKSTPLKRCPHCLAGKQTRVTFK 348

[Close]

BLAST of Cmc03g0064951 vs. ExPASy TrEMBL
Match: A0A5D3C706 (Putative retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00910 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.8e-56
Identity = 117/148 (79.05%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND S NAVG   VHLKN NGSRLILKN KHIPDIRMNL ST KLD+E FCNTFDNGIW
Sbjct: 160 MGNDGSTNAVGIGGVHLKNINGSRLILKNVKHIPDIRMNLISTSKLDNEGFCNTFDNGIW 219

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLT+G MVI KGQKI  LYY+DAKI+DSDINTVN EANVELW  RLSHMSEKGLKIL KK
Sbjct: 220 KLTEGFMVIAKGQKISLLYYVDAKIIDSDINTVNGEANVELWQMRLSHMSEKGLKILIKK 279

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFK 149
           NHL  LKSAPLK   H L  KQT VTFK
Sbjct: 280 NHLPDLKSAPLKWFAHYLAGKQTSVTFK 307

[Close]

BLAST of Cmc03g0064951 vs. ExPASy TrEMBL
Match: A0A438HUT4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_569 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-48
Identity = 100/155 (64.52%), Postives = 114/155 (73.55%), Query Frame = 0


Query: 1   MGNDKSANAVGTEDVHLKNRNGSRLILKNFKHIPDIRMNLFSTGKLDDECFCNTFDNGIW 60
           MGND SA A+G  DV L+  NG+ L LKN KHIPDIRMNL STGKLDDE FCNTF +  W
Sbjct: 301 MGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQW 360

Query: 61  KLTKGSMVIVKGQKILSLYYMDAKIMDSDINTVNDEANVELWHERLSHMSEKGLKILTKK 120
           KLT+GSMVI KG K  SLY M A+++DS IN V+D++  ELWH RL HMSEKGL IL KK
Sbjct: 361 KLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKK 420

Query: 121 NHLSGLKSAPLKRCLHCLPVKQTRVTFKIILAFKK 156
           N LSG+K   LKRC HCL  KQTRV FK +   +K
Sbjct: 421 NLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRK 455

[Close]

BLAST of Cmc03g0064951 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.6e-11
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 58  GIWKLTKGSMVIVKGQKILSLYYMDAKIMDSDIN---TVNDEANVELWHERLSHMSEKGL 117
           G+ K+ KG   I+KG +  SLY +   +   + N   T  DE    LWH RL+HMS++G+
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDE--TRLWHSRLAHMSQRGM 86

Query: 118 KILTKKNHLSGLKSAPLKRCLHCLPVKQTRVTF 148
           ++L KK  L   K + LK C  C+  K  RV F
Sbjct: 87  ELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNF 117

The following BLAST results are available for this feature:

BLAST of Cmc03g0064951 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040427.1	5.8e-64	84.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYJ98688.1	5.8e-64	84.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0047570.1	1.9e-59	77.36	putative retrotransposon [Cucumis melo var. makuwa] >TYK14964.1 putative retrotr...	[more]
KAA0065636.1	9.9e-56	79.05	putative retrotransposon [Cucumis melo var. makuwa] >TYK07205.1 putative retrotr...	[more]
RVW24680.1	2.6e-48	64.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Cmc03g0064951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.3e-29	44.59	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P93293	6.5e-10	38.71	Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc03g0064951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKF7	2.8e-64	84.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7TFU1	2.8e-64	84.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3CVK2	9.3e-60	77.36	Putative retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5D3C706	4.8e-56	79.05	Putative retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A438HUT4	1.3e-48	64.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

BLAST of Cmc03g0064951 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00300.1	4.6e-11	38.71	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 78..142 e-value: 7.2E-11 score: 41.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0064951.1	Cmc03g0064951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding