Homology
BLAST of Cmc03g0064931 vs. NCBI nr
Match:
RVW24680.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 263.1 bits (671), Expect = 1.8e-66
Identity = 136/226 (60.18%), Postives = 155/226 (68.58%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASAVGSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 993 MRRVPYASAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 1052
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 1053 LTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1112
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
AAEA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 1113 AAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 1172
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+S+
Sbjct: 1173 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNSR 1218
BLAST of Cmc03g0064931 vs. NCBI nr
Match:
RVW24009.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 261.5 bits (667), Expect = 5.4e-66
Identity = 135/226 (59.73%), Postives = 154/226 (68.14%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASAVGSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 353 MRRVPYASAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 412
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 413 LTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 472
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
AAEA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 473 AAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 532
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+ +
Sbjct: 533 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 578
BLAST of Cmc03g0064931 vs. NCBI nr
Match:
CAN75440.1 (hypothetical protein VITISV_007304 [Vitis vinifera])
HSP 1 Score: 259.6 bits (662), Expect = 2.0e-65
Identity = 133/226 (58.85%), Postives = 153/226 (67.70%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASA+GSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 1077 MRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 1136
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 1137 LTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1196
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
A EA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 1197 AAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 1256
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+ +
Sbjct: 1257 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1302
BLAST of Cmc03g0064931 vs. NCBI nr
Match:
RVW27439.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 259.6 bits (662), Expect = 2.0e-65
Identity = 133/226 (58.85%), Postives = 153/226 (67.70%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASA+GSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 959 MRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 1018
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 1019 LTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1078
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
A EA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 1079 AAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 1138
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+ +
Sbjct: 1139 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1184
BLAST of Cmc03g0064931 vs. NCBI nr
Match:
RVW74036.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 259.6 bits (662), Expect = 2.0e-65
Identity = 133/226 (58.85%), Postives = 153/226 (67.70%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASA+GSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 1023 MRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 1082
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 1083 LTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1142
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
A EA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 1143 AAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 1202
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+ +
Sbjct: 1203 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1248
BLAST of Cmc03g0064931 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 6.8e-56
Identity = 114/223 (51.12%), Postives = 139/223 (62.33%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M+K+PY+SAVGSLMYAMVCTR DIAH +GVVSRF+ NP K+HWEA K I+RYLRGT+
Sbjct: 1106 MAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDC 1165
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
L FG PIL G LQKCVALSTTEAEYI
Sbjct: 1166 LCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1225
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
A E K+M+W+ RF+QELG Q YV+YCD+QS I L K + +H+RTKHI VRYHW+R+
Sbjct: 1226 AATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIRE 1285
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSS 184
++DE + + DMLTK +PR E C VGM S+
Sbjct: 1286 MVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGMHSN 1328
BLAST of Cmc03g0064931 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 96.3 bits (238), Expect = 3.9e-19
Identity = 62/221 (28.05%), Postives = 97/221 (43.89%), Query Frame = 0
Query: 5 PYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLKLTFG 64
P S +G LMY M+CTR D+ + ++SR+ S + W+ K ++RYL+GT ++KL F
Sbjct: 1180 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFK 1239
Query: 65 DGKPI---LIGL----------------------------------QKCVALSTTEAEYI 124
+IG Q VA S+TEAEY+
Sbjct: 1240 KNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYM 1299
Query: 125 TAAEAYKKMLWMNRFIQELGFKQPRYV-IYCDNQSVIHLGKIATFHSRTKHIGVRYHWLR 181
EA ++ LW+ + + K + IY DNQ I + + H R KHI ++YH+ R
Sbjct: 1300 ALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAR 1359
BLAST of Cmc03g0064931 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 66/218 (30.28%), Postives = 94/218 (43.12%), Query Frame = 0
Query: 6 YASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLKLTFGD 65
Y VGSL Y + TR DI++ + +S+FM P ++H +A K I+RYL GT N +
Sbjct: 1245 YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK 1304
Query: 66 GKPILIGL----------------------------------QKCVALSTTEAEYITAAE 125
G + + QK V S+TEAEY + A
Sbjct: 1305 GNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1364
Query: 126 AYKKMLWMNRFIQELGFKQPR-YVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRDALN 182
+M W+ + ELG + R VIYCDN +L FHSR KHI + YH++R+ +
Sbjct: 1365 TSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQ 1424
BLAST of Cmc03g0064931 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 7.7e-15
Identity = 53/177 (29.94%), Postives = 79/177 (44.63%), Query Frame = 0
Query: 6 YASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLKLTFGD 65
Y VGSL Y + TR D+++ + +S++M P HW A K ++RYL GT + +
Sbjct: 1228 YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1287
Query: 66 GKPILIGL----------------------------------QKCVALSTTEAEYITAAE 125
G + + QK V S+TEAEY + A
Sbjct: 1288 GNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1347
Query: 126 AYKKMLWMNRFIQELGFKQPR-YVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 148
++ W+ + ELG + VIYCDN +L FHSR KHI + YH++R+
Sbjct: 1348 TSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRN 1403
BLAST of Cmc03g0064931 vs. ExPASy Swiss-Prot
Match:
P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 5.5e-13
Identity = 46/133 (34.59%), Postives = 67/133 (50.38%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M +PY SAVG++MY MV TR D+A +GV+S+F S+P HW+A K ++RYL+ T
Sbjct: 1 MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60
Query: 61 LTF-GDGKPILIGL---------------------------------QKCVALSTTEAEY 100
L F G L+G Q+ VALS+TE EY
Sbjct: 61 LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120
BLAST of Cmc03g0064931 vs. ExPASy TrEMBL
Match:
A0A438CN91 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3654 PE=4 SV=1)
HSP 1 Score: 263.1 bits (671), Expect = 9.0e-67
Identity = 136/226 (60.18%), Postives = 155/226 (68.58%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASAVGSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 993 MRRVPYASAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 1052
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 1053 LTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1112
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
AAEA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 1113 AAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 1172
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+S+
Sbjct: 1173 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNSR 1218
BLAST of Cmc03g0064931 vs. ExPASy TrEMBL
Match:
A0A438CLF9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2520 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 2.6e-66
Identity = 135/226 (59.73%), Postives = 154/226 (68.14%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASAVGSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 353 MRRVPYASAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 412
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 413 LTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 472
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
AAEA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 473 AAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 532
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+ +
Sbjct: 533 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 578
BLAST of Cmc03g0064931 vs. ExPASy TrEMBL
Match:
A5C9D7 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_007304 PE=4 SV=1)
HSP 1 Score: 259.6 bits (662), Expect = 9.9e-66
Identity = 133/226 (58.85%), Postives = 153/226 (67.70%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASA+GSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 1077 MRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 1136
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 1137 LTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1196
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
A EA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 1197 AAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 1256
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+ +
Sbjct: 1257 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1302
BLAST of Cmc03g0064931 vs. ExPASy TrEMBL
Match:
A0A438GP95 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2090 PE=4 SV=1)
HSP 1 Score: 259.6 bits (662), Expect = 9.9e-66
Identity = 133/226 (58.85%), Postives = 153/226 (67.70%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASA+GSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 1023 MRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 1082
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 1083 LTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1142
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
A EA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 1143 AAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 1202
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+ +
Sbjct: 1203 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1248
BLAST of Cmc03g0064931 vs. ExPASy TrEMBL
Match:
A0A438CW59 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3445 PE=4 SV=1)
HSP 1 Score: 259.6 bits (662), Expect = 9.9e-66
Identity = 133/226 (58.85%), Postives = 153/226 (67.70%), Query Frame = 0
Query: 1 MSKIPYASAVGSLMYAMVCTRLDIAHVIGVVSRFMSNPEKQHWEADKCIMRYLRGTSNLK 60
M ++PYASA+GSLMYAMVCTR DIA+ +GVVSRF+SNP + HWEA K IMRYLRGTS LK
Sbjct: 959 MRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLK 1018
Query: 61 LTFGDGKPILIG---------------------------------LQKCVALSTTEAEYI 120
LTFG GKPIL+G LQKCVALSTTEAEYI
Sbjct: 1019 LTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1078
Query: 121 TAAEAYKKMLWMNRFIQELGFKQPRYVIYCDNQSVIHLGKIATFHSRTKHIGVRYHWLRD 180
A EA K++LWM F+QELGFKQ RYV+YCDNQS IHL K +T+H+R+KHI VRYHW+RD
Sbjct: 1079 AAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRD 1138
Query: 181 ALNDELFE-------PDGFDMLTKNLPRANLEFCHPTVGMTSSSSK 187
ALND LFE +G DMLTK LPR L C GM SS+ +
Sbjct: 1139 ALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1184
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| RVW24680.1 | 1.8e-66 | 60.18 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| RVW24009.1 | 5.4e-66 | 59.73 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| CAN75440.1 | 2.0e-65 | 58.85 | hypothetical protein VITISV_007304 [Vitis vinifera] | [more] |
| RVW27439.1 | 2.0e-65 | 58.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| RVW74036.1 | 2.0e-65 | 58.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 6.8e-56 | 51.12 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P04146 | 3.9e-19 | 28.05 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| Q94HW2 | 1.6e-17 | 30.28 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
| Q9ZT94 | 7.7e-15 | 29.94 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
| P0CV72 | 5.5e-13 | 34.59 | Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A438CN91 | 9.0e-67 | 60.18 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A0A438CLF9 | 2.6e-66 | 59.73 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A5C9D7 | 9.9e-66 | 58.85 | Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... | [more] |
| A0A438GP95 | 9.9e-66 | 58.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A0A438CW59 | 9.9e-66 | 58.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
