Cmc03g0064151 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0064151
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	transcription factor VIP1-like
Location	CMiso1.1chr03: 4690839 .. 4691403 (+)
RNA-Seq Expression	Cmc03g0064151
Synteny	Cmc03g0064151

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGTATATGTTTCAACTGATTGAGCTATGCTTAGTAATCTACTTTGGTGCAGAGAGATACCACTGGATTGACTACTGAGAACAGAGAACTCAAGCTAAGATTGCAAGCCATGGAGCAGCAAGCCCATCTGAGGGATGGTACGTGTTGTTCTTCATTCATAGAAAAATGCCAACTTTTTTGGTTTCATTTTTCATGAGGGCTTCATTTACACTACACATGGAGATGTTAACTATTCAAATGTTTGGTGGCTTTTACAGCTTTGAATGAGACATTGAGGGAGGAAGTACAGCGACTTAAGATAGCTGCTGCCCAACTGCCTGTTGCAAATGGCAACTCGTTCAACATGGGAGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATTGCTTCAATTTGGCAACTCTCAGAATCATCAACACCCACAGCTGCTTCACGTGTCTCAACCTGATGCTCGAGGAGGGTCTCCACCGTCCCAGCTTCCAGGAACTTAACCACATGCTTTAGTAACAGCTTTAGATAATCCATTAAGTACTGAGGATTGATATTTTTATTTGG

mRNA sequence

GAAGGTATATGTTTCAACTGATTGAGCTATGCTTAGTAATCTACTTTGGTGCAGAGAGATACCACTGGATTGACTACTGAGAACAGAGAACTCAAGCTAAGATTGCAAGCCATGGAGCAGCAAGCCCATCTGAGGGATGCTTTGAATGAGACATTGAGGGAGGAAGTACAGCGACTTAAGATAGCTGCTGCCCAACTGCCTGTTGCAAATGGCAACTCGTTCAACATGGGAGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATTGCTTCAATTTGGCAACTCTCAGAATCATCAACACCCACAGCTGCTTCACGTGTCTCAACCTGATGCTCGAGGAGGGTCTCCACCGTCCCAGCTTCCAGGAACTTAACCACATGCTTTAGTAACAGCTTTAGATAATCCATTAAGTACTGAGGATTGATATTTTTATTTGG

Coding sequence (CDS)

ATGGAGCAGCAAGCCCATCTGAGGGATGCTTTGAATGAGACATTGAGGGAGGAAGTACAGCGACTTAAGATAGCTGCTGCCCAACTGCCTGTTGCAAATGGCAACTCGTTCAACATGGGAGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATTGCTTCAATTTGGCAACTCTCAGAATCATCAACACCCACAGCTGCTTCACGTGTCTCAACCTGATGCTCGAGGAGGGTCTCCACCGTCCCAGCTTCCAGGAACTTAA

Protein sequence

MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPGT

Homology

[Close]

BLAST of Cmc03g0064151 vs. NCBI nr
Match: XP_008441523.1 (PREDICTED: transcription factor VIP1-like [Cucumis melo] >KAA0054921.1 transcription factor VIP1-like [Cucumis melo var. makuwa] >TYK22710.1 transcription factor VIP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 2.9e-41
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN
Sbjct: 282 MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 341

Query: 61  SQNHQHPQLLHVSQPDARGGSPPSQLPG 89
           SQNHQHPQLLHVSQPDARGGSPPSQLPG
Sbjct: 342 SQNHQHPQLLHVSQPDARGGSPPSQLPG 369

[Close]

BLAST of Cmc03g0064151 vs. NCBI nr
Match: KAE8646672.1 (hypothetical protein Csa_005436 [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 1.9e-37
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM GGGLPPQFPPLQTS LQFGN
Sbjct: 100 MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM-GGGLPPQFPPLQTSFLQFGN 159

Query: 61  SQNHQHPQLLHVSQPDARGGSPPSQLPG 89
           SQNHQ PQLLH+SQPDARGGSPPSQLPG
Sbjct: 160 SQNHQQPQLLHMSQPDARGGSPPSQLPG 186

[Close]

BLAST of Cmc03g0064151 vs. NCBI nr
Match: XP_031744081.1 (transcription factor VIP1 [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 1.9e-37
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM GGGLPPQFPPLQTS LQFGN
Sbjct: 241 MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM-GGGLPPQFPPLQTSFLQFGN 300

Query: 61  SQNHQHPQLLHVSQPDARGGSPPSQLPG 89
           SQNHQ PQLLH+SQPDARGGSPPSQLPG
Sbjct: 301 SQNHQQPQLLHMSQPDARGGSPPSQLPG 327

[Close]

BLAST of Cmc03g0064151 vs. NCBI nr
Match: XP_031742052.1 (LOW QUALITY PROTEIN: transcription factor VIP1-like [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 9.5e-37
Identity = 83/88 (94.32%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQAHLRDALNETL EEVQRLKIAAAQLPVANGNSFNM GGGLPPQFPPLQTS LQFGN
Sbjct: 145 MEQQAHLRDALNETLXEEVQRLKIAAAQLPVANGNSFNM-GGGLPPQFPPLQTSFLQFGN 204

Query: 61  SQNHQHPQLLHVSQPDARGGSPPSQLPG 89
           SQNHQ PQLLH+SQPDARGGSPPSQLPG
Sbjct: 205 SQNHQQPQLLHMSQPDARGGSPPSQLPG 231

[Close]

BLAST of Cmc03g0064151 vs. NCBI nr
Match: XP_038886256.1 (transcription factor VIP1-like [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 6.2e-36
Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFN+ GGGLPPQFPPLQTSLLQFGN
Sbjct: 263 MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNI-GGGLPPQFPPLQTSLLQFGN 322

Query: 61  SQNHQHPQLLHVSQPDARGGSPPSQLPG 89
            QNHQ PQLLH+SQPDARGGS PSQLPG
Sbjct: 323 CQNHQQPQLLHMSQPDARGGSSPSQLPG 349

[Close]

BLAST of Cmc03g0064151 vs. ExPASy Swiss-Prot
Match: Q9MA75 (Transcription factor VIP1 OS=Arabidopsis thaliana OX=3702 GN=VIP1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.6e-10
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           +EQQA LRDALNE LR+E+ RLK+ A ++P  NGNS+N        QF   Q+++ QFGN
Sbjct: 264 LEQQAELRDALNEALRDELNRLKVVAGEIPQGNGNSYNRA------QFSSQQSAMNQFGN 322

Query: 61  SQNHQ 66
             N Q
Sbjct: 324 KTNQQ 322

[Close]

BLAST of Cmc03g0064151 vs. ExPASy Swiss-Prot
Match: Q69IL4 (Transcription factor RF2a OS=Oryza sativa subsp. japonica OX=39947 GN=RF2a PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-07
Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQ HL+DALN+TL+ EVQRLK+A  Q+  ANG    M  GG+P QF          GN
Sbjct: 251 MEQQVHLQDALNDTLKSEVQRLKVATGQM--ANGGGMMMNFGGMPHQFG---------GN 309

Query: 61  SQNHQHPQLL 71
            Q  Q+ Q +
Sbjct: 311 QQMFQNNQAM 309

[Close]

BLAST of Cmc03g0064151 vs. ExPASy Swiss-Prot
Match: Q6S4P4 (Transcription factor RF2b OS=Oryza sativa subsp. japonica OX=39947 GN=RF2b PE=1 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 5.0e-04
Identity = 37/104 (35.58%), Postives = 49/104 (47.12%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQL---------------------PVANGNSFNM 60
           MEQQA LRDALN+ L++E++RLK+A  ++                     P+A  N+   
Sbjct: 202 MEQQAQLRDALNDALKQELERLKLATGEMTNSNETYSMGLQHVPYNTPFFPLAQHNAARQ 261

Query: 61  GGG-GLPPQFPPLQTSLLQFGNSQNH--QHPQ-LLHVSQPDARG 80
            GG  LPPQF P +       N  NH   HP  L  + Q D  G
Sbjct: 262 NGGTQLPPQFQPPRP------NVPNHMLSHPNGLQDIMQQDPLG 299

[Close]

BLAST of Cmc03g0064151 vs. ExPASy Swiss-Prot
Match: O22873 (bZIP transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=BZIP18 PE=1 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 8.5e-04
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQA LRDALNE L++EV+RLK A  +  V+  +++N+G   +  Q  P Q S  Q  +
Sbjct: 218 MEQQAKLRDALNEQLKKEVERLKFATGE--VSPADAYNLGMAHMQYQQQP-QQSFFQHHH 277

Query: 61  SQN------HQHPQLLHVSQPD 77
            Q        Q     H+ QP+
Sbjct: 278 QQQTDAQNLQQMTHQFHLFQPN 296

[Close]

BLAST of Cmc03g0064151 vs. ExPASy TrEMBL
Match: A0A5A7UMX9 (Transcription factor VIP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00300 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-41
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN
Sbjct: 282 MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 341

Query: 61  SQNHQHPQLLHVSQPDARGGSPPSQLPG 89
           SQNHQHPQLLHVSQPDARGGSPPSQLPG
Sbjct: 342 SQNHQHPQLLHVSQPDARGGSPPSQLPG 369

[Close]

BLAST of Cmc03g0064151 vs. ExPASy TrEMBL
Match: A0A1S3B3P0 (transcription factor VIP1-like OS=Cucumis melo OX=3656 GN=LOC103485625 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-41
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN
Sbjct: 282 MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 341

Query: 61  SQNHQHPQLLHVSQPDARGGSPPSQLPG 89
           SQNHQHPQLLHVSQPDARGGSPPSQLPG
Sbjct: 342 SQNHQHPQLLHVSQPDARGGSPPSQLPG 369

[Close]

BLAST of Cmc03g0064151 vs. ExPASy TrEMBL
Match: A0A0A0KBC6 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057150 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.3e-38
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM GGGLPPQFPPLQTS LQFGN
Sbjct: 276 MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM-GGGLPPQFPPLQTSFLQFGN 335

Query: 61  SQNHQHPQLLHVSQPDARGGSPPSQLPG 89
           SQNHQ PQLLH+SQPDARGGSPPSQLPG
Sbjct: 336 SQNHQQPQLLHMSQPDARGGSPPSQLPG 362

[Close]

BLAST of Cmc03g0064151 vs. ExPASy TrEMBL
Match: A0A6J1BXG7 (transcription factor VIP1 OS=Momordica charantia OX=3673 GN=LOC111006219 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.9e-25
Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANG-NSFNMGGGGLPPQFP-PLQTSLLQF 60
           MEQQA LRDALN+TLREEVQRLKIAAAQLP ANG NSFN  GGGLPPQFP  L  SLLQF
Sbjct: 146 MEQQAQLRDALNDTLREEVQRLKIAAAQLPAANGSNSFNT-GGGLPPQFPTALHPSLLQF 205

Query: 61  GNSQNHQHPQLLHVSQPDARGGSPPSQLPG 89
           G+S NH+H QLLH+ QPDA+G S  SQLPG
Sbjct: 206 GDSPNHRHQQLLHMPQPDAQGVSSLSQLPG 234

[Close]

BLAST of Cmc03g0064151 vs. ExPASy TrEMBL
Match: A0A6J1JRY6 (transcription factor VIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111487272 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.1e-21
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN+GGG LPPQF  LQ SL QFGN
Sbjct: 264 MEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGN 323

Query: 61  SQNHQ 66
           SQNHQ
Sbjct: 324 SQNHQ 328

[Close]

BLAST of Cmc03g0064151 vs. TAIR 10
Match: AT1G43700.1 (VIRE2-interacting protein 1 )

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           +EQQA LRDALNE LR+E+ RLK+ A ++P  NGNS+N        QF   Q+++ QFGN
Sbjct: 264 LEQQAELRDALNEALRDELNRLKVVAGEIPQGNGNSYNRA------QFSSQQSAMNQFGN 322

Query: 61  SQNHQ 66
             N Q
Sbjct: 324 KTNQQ 322

[Close]

BLAST of Cmc03g0064151 vs. TAIR 10
Match: AT1G06070.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQ HL+DALN+ L+EEVQ LK+   Q P +NG S N G  G   QF P   S+     
Sbjct: 280 MEQQVHLQDALNDALKEEVQHLKVLTGQGP-SNGTSMNYGSFGSNQQFYPNNQSMHTILA 339

Query: 61  SQNHQHPQL 70
           +Q  Q  Q+
Sbjct: 340 AQQLQQLQI 347

[Close]

BLAST of Cmc03g0064151 vs. TAIR 10
Match: AT2G40620.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 44.3 bits (103), Expect = 6.0e-05
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGN 60
           MEQQA LRDALNE L++EV+RLK A  +  V+  +++N+G   +  Q  P Q S  Q  +
Sbjct: 218 MEQQAKLRDALNEQLKKEVERLKFATGE--VSPADAYNLGMAHMQYQQQP-QQSFFQHHH 277

Query: 61  SQN------HQHPQLLHVSQPD 77
            Q        Q     H+ QP+
Sbjct: 278 QQQTDAQNLQQMTHQFHLFQPN 296

[Close]

BLAST of Cmc03g0064151 vs. TAIR 10
Match: AT1G06850.1 (basic leucine-zipper 52 )

HSP 1 Score: 43.9 bits (102), Expect = 7.9e-05
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 1   MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMG 41
           MEQQA LR+ALNE LR+EV+R+K+   ++   N +SF+MG
Sbjct: 218 MEQQAQLRNALNEALRKEVERMKMETGEIS-GNSDSFDMG 256

The following BLAST results are available for this feature:

BLAST of Cmc03g0064151 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441523.1	2.9e-41	100.00	PREDICTED: transcription factor VIP1-like [Cucumis melo] >KAA0054921.1 transcrip...	[more]
KAE8646672.1	1.9e-37	95.45	hypothetical protein Csa_005436 [Cucumis sativus]	[more]
XP_031744081.1	1.9e-37	95.45	transcription factor VIP1 [Cucumis sativus]	[more]
XP_031742052.1	9.5e-37	94.32	LOW QUALITY PROTEIN: transcription factor VIP1-like [Cucumis sativus]	[more]
XP_038886256.1	6.2e-36	93.18	transcription factor VIP1-like [Benincasa hispida]	[more]

BLAST of Cmc03g0064151 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA75	4.6e-10	50.77	Transcription factor VIP1 OS=Arabidopsis thaliana OX=3702 GN=VIP1 PE=1 SV=1	[more]
Q69IL4	1.6e-07	48.57	Transcription factor RF2a OS=Oryza sativa subsp. japonica OX=39947 GN=RF2a PE=1 ...	[more]
Q6S4P4	5.0e-04	35.58	Transcription factor RF2b OS=Oryza sativa subsp. japonica OX=39947 GN=RF2b PE=1 ...	[more]
O22873	8.5e-04	39.02	bZIP transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=BZIP18 PE=1 SV=1	[more]

BLAST of Cmc03g0064151 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMX9	1.4e-41	100.00	Transcription factor VIP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B3P0	1.4e-41	100.00	transcription factor VIP1-like OS=Cucumis melo OX=3656 GN=LOC103485625 PE=4 SV=1	[more]
A0A0A0KBC6	9.3e-38	95.45	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057150 PE=4 S...	[more]
A0A6J1BXG7	6.9e-25	77.78	transcription factor VIP1 OS=Momordica charantia OX=3673 GN=LOC111006219 PE=4 SV...	[more]
A0A6J1JRY6	6.1e-21	86.15	transcription factor VIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111487272 PE=4 ...	[more]

BLAST of Cmc03g0064151 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43700.1	3.3e-11	50.77	VIRE2-interacting protein 1	[more]
AT1G06070.1	2.2e-07	46.38	Basic-leucine zipper (bZIP) transcription factor family protein	[more]
AT2G40620.1	6.0e-05	39.02	Basic-leucine zipper (bZIP) transcription factor family protein	[more]
AT1G06850.1	7.9e-05	55.00	basic leucine-zipper 52	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 8..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..70
None	No IPR available	PANTHER	PTHR13690	TRANSCRIPTION FACTOR POSF21-RELATED	coord: 1..75
None	No IPR available	PANTHER	PTHR13690:SF86	BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED	coord: 1..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0064151.1	Cmc03g0064151.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity