Cmc03g0064131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0064131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 4675810 .. 4677216 (+)
RNA-Seq Expression	Cmc03g0064131
Synteny	Cmc03g0064131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTATAGCGATGCCTCCAAAAAGGGACTGGGCTGTGTTTTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTTTCGTCAGTTGAAGAGTCCTGAGCAGAACTACCCTACCCATGATTTGGAGTTGGCAGTAGTGGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAAAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGCTGAACATGAGACAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATATAGTAGCTGACGCGCTGAGTAGGAAGGTCGCACATTCAGCAGCACTGGTCACCAAGCAAGCCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTTACAGTTGGCTCAGTTGTCAGTACAGCCGACCTTGAGGCAAAGGATTATCGTTGCTCAGTTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAAAGACAGGGGAAAGTGAGGACTTCTCCATATCCTGTAACGATGGCCTTACGTTCAAGGGGCGCTTATGTGTGTCGGAGGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTCACCATGCACCCTGGAAGTACAAAGATGTACCAGGACTTAAGGAGTGTCAATTGGTGGAGGAACATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGGTGTTTAGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAGCCGGGTTGTTGCAACCTTTGAGCATGCCAGGATGGAAATGGGAAAGTGTGTCGATGGACTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCACTTTGTGCCAAGGAAATCCACTTCCACTGCCAGTAAGTGGGGGCAGTTATACATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGATGCTCGTTTCATATCGAAGTTCTGGAAAGGACTTCAGCTTGCATTAGGCACGAGGTTAGACTTCAGCACGGCCTTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGGTTTTGGAAGACATGCTGCGAGCCTGCGTGCTAGAGTTTTCAGGGAGTTGGGACTCCCATTTGCATCTGATGGAGTTCGCCTATAATAACAGCTACCAGGCTACCATCGGCATGGCACCATTTGAGGCTCTGTATGGTAAGTGTTCTAGATCCCCTGTCTGTTGGGGCGAGGTTGGTGAGCAGAGAATGCTAGGTTCCGAGTTAGTTCAGACCACCAATGCAGTCATACAGAAGATCTGA

mRNA sequence

ATGATCTATAGCGATGCCTCCAAAAAGGGACTGGGCTGTGTTTTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTTTCGTCAGTTGAAGAGTCCTGAGCAGAACTACCCTACCCATGATTTGGAGTTGGCAGTAGTGGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAAAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGCTGAACATGAGACAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATATAGTAGCTGACGCGCTGAGTAGGAAGGTCGCACATTCAGCAGCACTGGTCACCAAGCAAGCCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTTACAGTTGGCTCAGTTGTCAGTACAGCCGACCTTGAGGCAAAGGATTATCGTTGCTCAGTTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAAAGACAGGGGAAAGTGAGGACTTCTCCATATCCTGTAACGATGGCCTTACGTTCAAGGGGCGCTTATGTGTGTCGGAGGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTCACCATGCACCCTGGAAGTACAAAGATGTACCAGGACTTAAGGAGTGTCAATTGGTGGAGGAACATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGGTGTTTAGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAGCCGGGTTGTTGCAACCTTTGAGCATGCCAGGATGGAAATGGGAAAGTGTGTCGATGGACTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCACTTTGTGCCAAGGAAATCCACTTCCACTGCCAGTAAGTGGGGGCAGTTATACATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGATGCTCGTTTCATATCGAAGTTCTGGAAAGGACTTCAGCTTGCATTAGGCACGAGGTTAGACTTCAGCACGGCCTTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGGTTTTGGAAGACATGCTGCGAGCCTGCGTGCTAGAGTTTTCAGGGAGTTGGGACTCCCATTTGCATCTGATGGAGTTCGCCTATAATAACAGCTACCAGGCTACCATCGGCATGGCACCATTTGAGGCTCTGTATGGTAAGTGTTCTAGATCCCCTGTCTGTTGGGGCGAGGTTGGTGAGCAGAGAATGCTAGGTTCCGAGTTAGTTCAGACCACCAATGCAGTCATACAGAAGATCTGA

Coding sequence (CDS)

ATGATCTATAGCGATGCCTCCAAAAAGGGACTGGGCTGTGTTTTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTTTCGTCAGTTGAAGAGTCCTGAGCAGAACTACCCTACCCATGATTTGGAGTTGGCAGTAGTGGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAAAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGCTGAACATGAGACAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATATAGTAGCTGACGCGCTGAGTAGGAAGGTCGCACATTCAGCAGCACTGGTCACCAAGCAAGCCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTTACAGTTGGCTCAGTTGTCAGTACAGCCGACCTTGAGGCAAAGGATTATCGTTGCTCAGTTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAAAGACAGGGGAAAGTGAGGACTTCTCCATATCCTGTAACGATGGCCTTACGTTCAAGGGGCGCTTATGTGTGTCGGAGGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTCACCATGCACCCTGGAAGTACAAAGATGTACCAGGACTTAAGGAGTGTCAATTGGTGGAGGAACATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGGTGTTTAGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAGCCGGGTTGTTGCAACCTTTGAGCATGCCAGGATGGAAATGGGAAAGTGTGTCGATGGACTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCACTTTGTGCCAAGGAAATCCACTTCCACTGCCAGTAAGTGGGGGCAGTTATACATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGATGCTCGTTTCATATCGAAGTTCTGGAAAGGACTTCAGCTTGCATTAGGCACGAGGTTAGACTTCAGCACGGCCTTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGGTTTTGGAAGACATGCTGCGAGCCTGCGTGCTAGAGTTTTCAGGGAGTTGGGACTCCCATTTGCATCTGATGGAGTTCGCCTATAATAACAGCTACCAGGCTACCATCGGCATGGCACCATTTGAGGCTCTGTATGGTAAGTGTTCTAGATCCCCTGTCTGTTGGGGCGAGGTTGGTGAGCAGAGAATGCTAGGTTCCGAGTTAGTTCAGACCACCAATGCAGTCATACAGAAGATCTGA

Protein sequence

MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSAALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVKTGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI

Homology

[Close]

BLAST of Cmc03g0064131 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 887.1 bits (2291), Expect = 6.6e-254
Identity = 433/468 (92.52%), Postives = 446/468 (95.30%), Query Frame = 0


Query: 1   MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
           +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VV ALKIWRHYLYGE
Sbjct: 176 VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVLALKIWRHYLYGE 235

Query: 61  KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
           KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VADALSRKVAHSA
Sbjct: 236 KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA 295

Query: 121 ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
           AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQLNDPYL EKRR+V+
Sbjct: 296 ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVE 355

Query: 181 TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
           TG+ EDFSIS +DGL F+GRLCV EDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV W
Sbjct: 356 TGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 415

Query: 241 WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
           WR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLS+PGWKWESVSMDFITGLPKTLKG+
Sbjct: 416 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGH 475

Query: 301 TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
           TVIWVVVDRLTKSAHFVP KST TASKWGQLYMTEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 476 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 535

Query: 361 GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
           GLQLALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 536 GLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 595

Query: 421 YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
           YQATIGMAPFEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 596 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKI 643

[Close]

BLAST of Cmc03g0064131 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 885.2 bits (2286), Expect = 2.5e-253
Identity = 432/468 (92.31%), Postives = 446/468 (95.30%), Query Frame = 0


Query: 1   MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
           +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VVFALKIWRHYLYGE
Sbjct: 426 VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGE 485

Query: 61  KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
           KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VAD+LSRKVAHSA
Sbjct: 486 KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSA 545

Query: 121 ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
           AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQLNDPYL EKRR+V+
Sbjct: 546 ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVE 605

Query: 181 TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
           TG+ EDFSIS +DGL F+GRLCV EDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV W
Sbjct: 606 TGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 665

Query: 241 WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
           WR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLS+PGWKWESVSMDFITGLPKTLKGY
Sbjct: 666 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY 725

Query: 301 TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
           TVIWVVVDRLTKSAHFVP KST TASKWGQLY+TEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 726 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYVTEIVRLHGVPVSIISDRDARFTSKFWK 785

Query: 361 GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
           GLQLAL TRLDFSTAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 786 GLQLALCTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 845

Query: 421 YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
           YQATIGMAPFEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 846 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKI 893

[Close]

BLAST of Cmc03g0064131 vs. NCBI nr
Match: KAA0035890.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 884.0 bits (2283), Expect = 5.6e-253
Identity = 432/468 (92.31%), Postives = 444/468 (94.87%), Query Frame = 0


Query: 1   MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
           +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VVFALKIWRHYLYGE
Sbjct: 426 VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGE 485

Query: 61  KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
           KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VADALSRKVAHSA
Sbjct: 486 KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA 545

Query: 121 ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
           AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQLNDPYL EKRR+V+
Sbjct: 546 ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVE 605

Query: 181 TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
           TG+ EDFSIS +DGL F+GRLCV EDSAVK ELLTEAHSSPFTMHPGSTKMYQDLRSV W
Sbjct: 606 TGQGEDFSISSDDGLMFEGRLCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYW 665

Query: 241 WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
           WR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLS+PGWKWESVSMDFITGLPKTLKGY
Sbjct: 666 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY 725

Query: 301 TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
           TVIWVVVDRLTKSAHFVP KST TASKWGQLYMTEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 726 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 785

Query: 361 GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
           GLQLALGTRLDFST FHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 786 GLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 845

Query: 421 YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
           YQATIGMA FEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 846 YQATIGMASFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKI 893

[Close]

BLAST of Cmc03g0064131 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 881.7 bits (2277), Expect = 2.8e-252
Identity = 432/468 (92.31%), Postives = 444/468 (94.87%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
            +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VVFALKIWRHYLYGE
Sbjct: 860  VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGE 919

Query: 61   KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
            KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VADALSRKVAHSA
Sbjct: 920  KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA 979

Query: 121  ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
            AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQLNDPYL EKRR+V+
Sbjct: 980  ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVE 1039

Query: 181  TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
            TG+ EDFSIS +DGL F+GRLCV EDSAVKTELLTEAHSS FTMHPGSTKMYQDLRSV W
Sbjct: 1040 TGQGEDFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQDLRSVYW 1099

Query: 241  WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
            WR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLS+PGWKWESVSMDFITGLPKTLKGY
Sbjct: 1100 WRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY 1159

Query: 301  TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
            TVIWVVVDRLTKSAHFVP KST TASKWGQLYMTEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 1160 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 1219

Query: 361  GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
            GLQLALGTRLDFST FHPQTDGQ ERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 1220 GLQLALGTRLDFSTTFHPQTDGQIERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 1279

Query: 421  YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
            YQATIGMAPFEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 1280 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGLELVQTTNAAIQKI 1327

[Close]

BLAST of Cmc03g0064131 vs. NCBI nr
Match: KAA0032541.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 880.2 bits (2273), Expect = 8.0e-252
Identity = 429/468 (91.67%), Postives = 444/468 (94.87%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
            +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VVFALKIWRHYLY E
Sbjct: 860  VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYSE 919

Query: 61   KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
            KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VADALSRKVAHSA
Sbjct: 920  KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA 979

Query: 121  ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
            AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQ NDPYL EKRR+V+
Sbjct: 980  ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVE 1039

Query: 181  TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
            TG+ EDFSIS +DGL F+GRLCV ED+AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV W
Sbjct: 1040 TGQGEDFSISADDGLMFEGRLCVPEDTAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 1099

Query: 241  WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
            WR MKREVADFVSRCLVCQQVK+PRQ PAGL+Q LS+PGWKWESVSMDFITGLPKTLKGY
Sbjct: 1100 WRGMKREVADFVSRCLVCQQVKSPRQHPAGLMQLLSVPGWKWESVSMDFITGLPKTLKGY 1159

Query: 301  TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
            TVIWVVVDRLTKSAHFVP KST TASKWGQLYMTEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 1160 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 1219

Query: 361  GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
            GLQLALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 1220 GLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 1279

Query: 421  YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
            YQATIGMAPFEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 1280 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKI 1327

[Close]

BLAST of Cmc03g0064131 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-57
Identity = 137/445 (30.79%), Postives = 223/445 (50.11%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGK-----VVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRH 60
            ++ +DAS   +G VL Q+        V Y   ++   + NY   D E+  ++ +LK WRH
Sbjct: 709  LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768

Query: 61   YLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANIVADA 120
            YL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADA
Sbjct: 769  YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADA 828

Query: 121  LSRKVAHSAALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPY 180
            LSR       +V +  P+ +D E   I          + Q+S+    + +++    ND  
Sbjct: 829  LSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTK 888

Query: 181  LVEKRRLVKTGESEDFSISCNDGLTF--KGRLCVSEDSAVKTELLTEAHSSPFTMHPGST 240
            L+    L    +  + +I   DGL    K ++ +  D+ +   ++ + H     +HPG  
Sbjct: 889  LL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 948

Query: 241  KMYQDLRSVNWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDF 300
             +   +     W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDF
Sbjct: 949  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 1008

Query: 301  ITGLPKTLKGYTVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISD 360
            IT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D
Sbjct: 1009 ITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIAD 1068

Query: 361  RDARFISKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSH 420
             D  F S+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Sbjct: 1069 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1128

Query: 421  LHLMEFAYNNSYQATIGMAPFEALY 435
            + L++ +YNN+  +   M PFE ++
Sbjct: 1129 ISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0064131 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-57
Identity = 137/445 (30.79%), Postives = 223/445 (50.11%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGK-----VVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRH 60
            ++ +DAS   +G VL Q+        V Y   ++   + NY   D E+  ++ +LK WRH
Sbjct: 709  LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768

Query: 61   YLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANIVADA 120
            YL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADA
Sbjct: 769  YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADA 828

Query: 121  LSRKVAHSAALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPY 180
            LSR       +V +  P+ +D E   I          + Q+S+    + +++    ND  
Sbjct: 829  LSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTK 888

Query: 181  LVEKRRLVKTGESEDFSISCNDGLTF--KGRLCVSEDSAVKTELLTEAHSSPFTMHPGST 240
            L+    L    +  + +I   DGL    K ++ +  D+ +   ++ + H     +HPG  
Sbjct: 889  LL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 948

Query: 241  KMYQDLRSVNWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDF 300
             +   +     W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDF
Sbjct: 949  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 1008

Query: 301  ITGLPKTLKGYTVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISD 360
            IT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D
Sbjct: 1009 ITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIAD 1068

Query: 361  RDARFISKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSH 420
             D  F S+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Sbjct: 1069 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1128

Query: 421  LHLMEFAYNNSYQATIGMAPFEALY 435
            + L++ +YNN+  +   M PFE ++
Sbjct: 1129 ISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0064131 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-57
Identity = 137/445 (30.79%), Postives = 223/445 (50.11%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGK-----VVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRH 60
            ++ +DAS   +G VL Q+        V Y   ++   + NY   D E+  ++ +LK WRH
Sbjct: 709  LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768

Query: 61   YLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANIVADA 120
            YL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADA
Sbjct: 769  YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADA 828

Query: 121  LSRKVAHSAALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPY 180
            LSR       +V +  P+ +D E   I          + Q+S+    + +++    ND  
Sbjct: 829  LSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTK 888

Query: 181  LVEKRRLVKTGESEDFSISCNDGLTF--KGRLCVSEDSAVKTELLTEAHSSPFTMHPGST 240
            L+    L    +  + +I   DGL    K ++ +  D+ +   ++ + H     +HPG  
Sbjct: 889  LL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 948

Query: 241  KMYQDLRSVNWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDF 300
             +   +     W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDF
Sbjct: 949  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 1008

Query: 301  ITGLPKTLKGYTVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISD 360
            IT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D
Sbjct: 1009 ITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIAD 1068

Query: 361  RDARFISKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSH 420
             D  F S+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Sbjct: 1069 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1128

Query: 421  LHLMEFAYNNSYQATIGMAPFEALY 435
            + L++ +YNN+  +   M PFE ++
Sbjct: 1129 ISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0064131 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-57
Identity = 137/445 (30.79%), Postives = 223/445 (50.11%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGK-----VVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRH 60
            ++ +DAS   +G VL Q+        V Y   ++   + NY   D E+  ++ +LK WRH
Sbjct: 709  LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768

Query: 61   YLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANIVADA 120
            YL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADA
Sbjct: 769  YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADA 828

Query: 121  LSRKVAHSAALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPY 180
            LSR       +V +  P+ +D E   I          + Q+S+    + +++    ND  
Sbjct: 829  LSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTK 888

Query: 181  LVEKRRLVKTGESEDFSISCNDGLTF--KGRLCVSEDSAVKTELLTEAHSSPFTMHPGST 240
            L+    L    +  + +I   DGL    K ++ +  D+ +   ++ + H     +HPG  
Sbjct: 889  LL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 948

Query: 241  KMYQDLRSVNWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDF 300
             +   +     W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDF
Sbjct: 949  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 1008

Query: 301  ITGLPKTLKGYTVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISD 360
            IT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D
Sbjct: 1009 ITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIAD 1068

Query: 361  RDARFISKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSH 420
             D  F S+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Sbjct: 1069 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1128

Query: 421  LHLMEFAYNNSYQATIGMAPFEALY 435
            + L++ +YNN+  +   M PFE ++
Sbjct: 1129 ISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0064131 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-57
Identity = 137/445 (30.79%), Postives = 223/445 (50.11%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGK-----VVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRH 60
            ++ +DAS   +G VL Q+        V Y   ++   + NY   D E+  ++ +LK WRH
Sbjct: 709  LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768

Query: 61   YLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANIVADA 120
            YL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADA
Sbjct: 769  YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADA 828

Query: 121  LSRKVAHSAALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPY 180
            LSR       +V +  P+ +D E   I          + Q+S+    + +++    ND  
Sbjct: 829  LSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTK 888

Query: 181  LVEKRRLVKTGESEDFSISCNDGLTF--KGRLCVSEDSAVKTELLTEAHSSPFTMHPGST 240
            L+    L    +  + +I   DGL    K ++ +  D+ +   ++ + H     +HPG  
Sbjct: 889  LL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 948

Query: 241  KMYQDLRSVNWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDF 300
             +   +     W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDF
Sbjct: 949  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 1008

Query: 301  ITGLPKTLKGYTVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISD 360
            IT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D
Sbjct: 1009 ITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIAD 1068

Query: 361  RDARFISKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSH 420
             D  F S+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Sbjct: 1069 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1128

Query: 421  LHLMEFAYNNSYQATIGMAPFEALY 435
            + L++ +YNN+  +   M PFE ++
Sbjct: 1129 ISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc03g0064131 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 3.2e-254
Identity = 433/468 (92.52%), Postives = 446/468 (95.30%), Query Frame = 0


Query: 1   MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
           +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VV ALKIWRHYLYGE
Sbjct: 176 VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVLALKIWRHYLYGE 235

Query: 61  KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
           KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VADALSRKVAHSA
Sbjct: 236 KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA 295

Query: 121 ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
           AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQLNDPYL EKRR+V+
Sbjct: 296 ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVE 355

Query: 181 TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
           TG+ EDFSIS +DGL F+GRLCV EDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV W
Sbjct: 356 TGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 415

Query: 241 WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
           WR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLS+PGWKWESVSMDFITGLPKTLKG+
Sbjct: 416 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGH 475

Query: 301 TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
           TVIWVVVDRLTKSAHFVP KST TASKWGQLYMTEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 476 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 535

Query: 361 GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
           GLQLALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 536 GLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 595

Query: 421 YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
           YQATIGMAPFEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 596 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKI 643

[Close]

BLAST of Cmc03g0064131 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.2e-253
Identity = 432/468 (92.31%), Postives = 446/468 (95.30%), Query Frame = 0


Query: 1   MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
           +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VVFALKIWRHYLYGE
Sbjct: 426 VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGE 485

Query: 61  KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
           KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VAD+LSRKVAHSA
Sbjct: 486 KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSA 545

Query: 121 ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
           AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQLNDPYL EKRR+V+
Sbjct: 546 ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVE 605

Query: 181 TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
           TG+ EDFSIS +DGL F+GRLCV EDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV W
Sbjct: 606 TGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 665

Query: 241 WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
           WR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLS+PGWKWESVSMDFITGLPKTLKGY
Sbjct: 666 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY 725

Query: 301 TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
           TVIWVVVDRLTKSAHFVP KST TASKWGQLY+TEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 726 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYVTEIVRLHGVPVSIISDRDARFTSKFWK 785

Query: 361 GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
           GLQLAL TRLDFSTAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 786 GLQLALCTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 845

Query: 421 YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
           YQATIGMAPFEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 846 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKI 893

[Close]

BLAST of Cmc03g0064131 vs. ExPASy TrEMBL
Match: A0A5A7SXW6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00560 PE=4 SV=1)

HSP 1 Score: 884.0 bits (2283), Expect = 2.7e-253
Identity = 432/468 (92.31%), Postives = 444/468 (94.87%), Query Frame = 0


Query: 1   MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
           +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VVFALKIWRHYLYGE
Sbjct: 426 VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGE 485

Query: 61  KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
           KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VADALSRKVAHSA
Sbjct: 486 KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA 545

Query: 121 ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
           AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQLNDPYL EKRR+V+
Sbjct: 546 ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVE 605

Query: 181 TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
           TG+ EDFSIS +DGL F+GRLCV EDSAVK ELLTEAHSSPFTMHPGSTKMYQDLRSV W
Sbjct: 606 TGQGEDFSISSDDGLMFEGRLCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYW 665

Query: 241 WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
           WR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLS+PGWKWESVSMDFITGLPKTLKGY
Sbjct: 666 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY 725

Query: 301 TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
           TVIWVVVDRLTKSAHFVP KST TASKWGQLYMTEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 726 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 785

Query: 361 GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
           GLQLALGTRLDFST FHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 786 GLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 845

Query: 421 YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
           YQATIGMA FEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 846 YQATIGMASFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKI 893

[Close]

BLAST of Cmc03g0064131 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.3e-252
Identity = 432/468 (92.31%), Postives = 444/468 (94.87%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
            +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VVFALKIWRHYLYGE
Sbjct: 860  VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGE 919

Query: 61   KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
            KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VADALSRKVAHSA
Sbjct: 920  KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA 979

Query: 121  ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
            AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQLNDPYL EKRR+V+
Sbjct: 980  ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVE 1039

Query: 181  TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
            TG+ EDFSIS +DGL F+GRLCV EDSAVKTELLTEAHSS FTMHPGSTKMYQDLRSV W
Sbjct: 1040 TGQGEDFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQDLRSVYW 1099

Query: 241  WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
            WR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLS+PGWKWESVSMDFITGLPKTLKGY
Sbjct: 1100 WRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY 1159

Query: 301  TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
            TVIWVVVDRLTKSAHFVP KST TASKWGQLYMTEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 1160 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 1219

Query: 361  GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
            GLQLALGTRLDFST FHPQTDGQ ERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 1220 GLQLALGTRLDFSTTFHPQTDGQIERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 1279

Query: 421  YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
            YQATIGMAPFEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 1280 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGLELVQTTNAAIQKI 1327

[Close]

BLAST of Cmc03g0064131 vs. ExPASy TrEMBL
Match: A0A5A7SSL3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00540 PE=4 SV=1)

HSP 1 Score: 880.2 bits (2273), Expect = 3.9e-252
Identity = 429/468 (91.67%), Postives = 444/468 (94.87%), Query Frame = 0


Query: 1    MIYSDASKKGLGCVLMQQGKVVAYAFRQLKSPEQNYPTHDLELAVVVFALKIWRHYLYGE 60
            +IYSDASKKGLGCVLMQQGKVVAYA RQLK  EQNYPTHDLELA VVFALKIWRHYLY E
Sbjct: 860  VIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYSE 919

Query: 61   KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANIVADALSRKVAHSA 120
            KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN+VADALSRKVAHSA
Sbjct: 920  KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA 979

Query: 121  ALVTKQAPLLRDFERAEIAVSVGEVTLQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVK 180
            AL+TKQ PLLRDFERAEIAVSVGEVT QLAQLSVQPTLRQ+II AQ NDPYL EKRR+V+
Sbjct: 980  ALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVE 1039

Query: 181  TGESEDFSISCNDGLTFKGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNW 240
            TG+ EDFSIS +DGL F+GRLCV ED+AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV W
Sbjct: 1040 TGQGEDFSISADDGLMFEGRLCVPEDTAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 1099

Query: 241  WRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSMPGWKWESVSMDFITGLPKTLKGY 300
            WR MKREVADFVSRCLVCQQVK+PRQ PAGL+Q LS+PGWKWESVSMDFITGLPKTLKGY
Sbjct: 1100 WRGMKREVADFVSRCLVCQQVKSPRQHPAGLMQLLSVPGWKWESVSMDFITGLPKTLKGY 1159

Query: 301  TVIWVVVDRLTKSAHFVPRKSTSTASKWGQLYMTEIVRLHGVPVSIISDRDARFISKFWK 360
            TVIWVVVDRLTKSAHFVP KST TASKWGQLYMTEIVRLHGVPVSIISDRDARF SKFWK
Sbjct: 1160 TVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 1219

Query: 361  GLQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFAYNNS 420
            GLQLALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSHLHLMEFAYNNS
Sbjct: 1220 GLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNS 1279

Query: 421  YQATIGMAPFEALYGKCSRSPVCWGEVGEQRMLGSELVQTTNAVIQKI 469
            YQATIGMAPFEALYGKC RSPVCWGEVGEQRMLG ELVQTTNA IQKI
Sbjct: 1280 YQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKI 1327

The following BLAST results are available for this feature:

BLAST of Cmc03g0064131 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040942.1	6.6e-254	92.52	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	2.5e-253	92.31	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035890.1	5.6e-253	92.31	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	2.8e-252	92.31	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032541.1	8.0e-252	91.67	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0064131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.1e-57	30.79	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.1e-57	30.79	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.1e-57	30.79	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.1e-57	30.79	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.1e-57	30.79	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0064131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBV4	3.2e-254	92.52	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]
A0A5A7TVN9	1.2e-253	92.31	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7SXW6	2.7e-253	92.31	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56...	[more]
A0A5A7V4E4	1.3e-252	92.31	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7SSL3	3.9e-252	91.67	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46...	[more]

BLAST of Cmc03g0064131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 168..262 e-value: 7.4E-16 score: 60.2
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 200..432 coord: 5..126
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 2..116 e-value: 1.89844E-56 score: 181.152
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 272..462 e-value: 4.3E-45 score: 155.5
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 2..94 e-value: 4.2E-30 score: 104.1
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 208..263 e-value: 3.4E-15 score: 55.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 274..437 score: 19.5769
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 275..432
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0064131.1	Cmc03g0064131.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding