Cmc03g0063261 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0063261
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr03: 3742441 .. 3743497 (+)
RNA-Seq Expression	Cmc03g0063261
Synteny	Cmc03g0063261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACTTGGAAAAAAAAAAAACAAGAATTGAGTCGGGAATAAACAGATGATTGATTATACATAAACAGAAAAGAAAAATCTTTCAAGAAACCTTGATGATAGAGACAGAGAGAAAGAGAGATCACAGAGTTTCAAGCTTTAAATGGATAAGGAAAATGGGTGAAATCACATAAATAACCATATTGGGTGATATCATCAGAAGAACTCTGCTCAGCAGAGAAACTCAATCCACCATAAGACATATTAACAACACAATTTTCTGCACAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGTATTATTATGAGCGTAACGAGCGAGACGGGCTTTAGCAAGAGCAAGATCATGTTGAAGCTCCACCATTTTAGTCTGCAACAAAGCTATAGCACCAATGCAGCCGTAAACAGGATCTCTAAGCCTGGCTTCAGCTTCATAAGCCAAAGAATTAACAGTATCTTCTCTCTGTTCTTCAGGAACTTCAGTCAAAATCTTACTAACATTACTTGCCCCAAAAACCTTATGAACTTTGGCAAATTTCTTTGGCTCATCAGACCTAAAATAAGGAGCAAAAATACAAGTGGGAATACATCTTCTTTTCAACAATTTGCAAGCTGCACAAGAAGATGAAGAACGAGTCTCATGCCAACCTCTCATTCTTGCTCTTCATTCATTATGCCAAAATGAAATAATGTTGTCATATTCTTTACAACAAAGGATATGTATTTATATATGGATTTGTTGGGATTAGAGTAATTAAGAAAAAAGAGGGGTGGGGCCTAAATTTGGTTTAGAGCAAATGGAGAATTGAAAGTTTGAAAGAGACTATTCAAAGGAAAAAAGAAGAAACACTTTTAATTGAAATTTTTCAGAAAGTGGGAATTAAAGAACATGGGGTGACATTATTTGTGTTCCTAAGTTAGGATGAGACATCATATTTGATAAATAAAGTAAGATATTGATGATCTGTATGAACAAAGTGAAAATAAAATCAAATTTTATTCTATTTTCTTTATTAGAAAGTTAGTTTTCAGCTTTGTGGTGTGAAATTGATAGTTTGG

mRNA sequence

TATACTTGGAAAAAAAAAAAACAAGAATTGAGTCGGGAATAAACAGATGATTGATTATACATAAACAGAAAAGAAAAATCTTTCAAGAAACCTTGATGATAGAGACAGAGAGAAAGAGAGATCACAGAGTTTCAAGCTTTAAATGGATAAGGAAAATGGGTGAAATCACATAAATAACCATATTGGGTGATATCATCAGAAGAACTCTGCTCAGCAGAGAAACTCAATCCACCATAAGACATATTAACAACACAATTTTCTGCACAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGTATTATTATGAGCGTAACGAGCGAGACGGGCTTTAGCAAGAGCAAGATCATGTTGAAGCTCCACCATTTTAGTCTGCAACAAAGCTATAGCACCAATGCAGCCGTAAACAGGATCTCTAAGCCTGGCTTCAGCTTCATAAGCCAAAGAATTAACAGTATCTTCTCTCTGTTCTTCAGGAACTTCAGTCAAAATCTTACTAACATTACTTGCCCCAAAAACCTTATGAACTTTGGCAAATTTCTTTGGCTCATCAGACCTAAAATAAGGAGCAAAAATACAAGTGGGAATACATCTTCTTTTCAACAATTTGCAAGCTGCACAAGAAGATGAAGAACGAGTCTCATGCCAACCTCTCATTCTTGCTCTTCATTCATTATGCCAAAATGAAATAATGTTGTCATATTCTTTACAACAAAGGATATGTATTTATATATGGATTTGTTGGGATTAGAGTAATTAAGAAAAAAGAGGGGTGGGGCCTAAATTTGGTTTAGAGCAAATGGAGAATTGAAAGTTTGAAAGAGACTATTCAAAGGAAAAAAGAAGAAACACTTTTAATTGAAATTTTTCAGAAAGTGGGAATTAAAGAACATGGGGTGACATTATTTGTGTTCCTAAGTTAGGATGAGACATCATATTTGATAAATAAAGTAAGATATTGATGATCTGTATGAACAAAGTGAAAATAAAATCAAATTTTATTCTATTTTCTTTATTAGAAAGTTAGTTTTCAGCTTTGTGGTGTGAAATTGATAGTTTGG

Coding sequence (CDS)

ATGAGCGTAACGAGCGAGACGGGCTTTAGCAAGAGCAAGATCATGTTGAAGCTCCACCATTTTAGTCTGCAACAAAGCTATAGCACCAATGCAGCCGTAAACAGGATCTCTAAGCCTGGCTTCAGCTTCATAAGCCAAAGAATTAACAGTATCTTCTCTCTGTTCTTCAGGAACTTCAGTCAAAATCTTACTAACATTACTTGCCCCAAAAACCTTATGAACTTTGGCAAATTTCTTTGGCTCATCAGACCTAAAATAAGGAGCAAAAATACAAGTGGGAATACATCTTCTTTTCAACAATTTGCAAGCTGCACAAGAAGATGA

Protein sequence

MSVTSETGFSKSKIMLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFSQNLTNITCPKNLMNFGKFLWLIRPKIRSKNTSGNTSSFQQFASCTRR

Homology

[Close]

BLAST of Cmc03g0063261 vs. NCBI nr
Match: QCD82542.1 (hypothetical protein DEO72_LG2g2882 [Vigna unguiculata])

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 2   SVTSETGFSKSKIMLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFSQ 61
           ++TS+T  S  K++LKLHH  L++SY TN ++N +S+PGF  IS+RI  + SL   NF +
Sbjct: 114 NITSKTILSNGKVVLKLHHLPLKKSYGTNTSINGVSEPGFGIISERIRRVLSLLLGNFDE 173

Query: 62  NLTNITCPKNLMNFGKFLWLIRPKIRSKNTSGNTSSFQQFASCT 106
           +L +IT  +NL++ GKFL LIR K R K T G  SS Q+ A CT
Sbjct: 174 DLAHITGSENLVHLGKFLALIRTKARCKYTIGYASSLQELAGCT 217

[Close]

BLAST of Cmc03g0063261 vs. NCBI nr
Match: BAT86454.1 (hypothetical protein VIGAN_04410700 [Vigna angularis var. angularis])

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-15
Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 2   SVTS-ETGFSKSKIMLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFS 61
           SVTS +T  S  +IMLKL H  LQQSY TNA++N +S+P    I +RI+ + SL FR+F 
Sbjct: 15  SVTSCKTVLSNGEIMLKLDHLPLQQSYGTNASINGVSEPCLGLIRERIDGVLSLLFRHFD 74

Query: 62  QNLTNITCPKNLMNFGKFLWLIRPKIRSKNTSG 94
           Q+L +I   KNL++ GK L LIRPK+R KNT G
Sbjct: 75  QDLADIAGSKNLVHLGKLLALIRPKVRCKNTIG 107

[Close]

BLAST of Cmc03g0063261 vs. NCBI nr
Match: KAG2406717.1 (uncharacterized protein HKW66_Vig0059740 [Vigna angularis])

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 2  SVTS-ETGFSKSKIMLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFS 61
          SVTS +T  S  +IMLKL H  LQQSY TNA++N +S+P    I +RI+ + SL FR+F 
Sbjct: 15 SVTSCKTVLSNGEIMLKLDHLPLQQSYGTNASINGVSEPCLGLIRERIDGVLSLLFRHFD 74

Query: 62 QNLTNITCPKNLMNFGKFLWLIRPK 86
          Q+L +I   KNL++ GK L LIRPK
Sbjct: 75 QDLADIAGSKNLVHLGKLLALIRPK 99

[Close]

BLAST of Cmc03g0063261 vs. NCBI nr
Match: RDX61889.1 (hypothetical protein CR513_59835, partial [Mucuna pruriens])

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-11
Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 15 MLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFSQNLTNITCPKNLMN 74
          MLKLHH  LQ+SY TNA++NR+S+P  S I QRI+ + SL F + +Q+L +I   K+L++
Sbjct: 1  MLKLHHLPLQESYGTNASINRVSQPCLSLICQRIHCVLSLLFWHLNQDLAHIAGSKHLVH 60

Query: 75 FGKFLWLIRPKIRSKN 91
           GK L LIRPKI   N
Sbjct: 61 LGKLLALIRPKINVSN 76

[Close]

BLAST of Cmc03g0063261 vs. NCBI nr
Match: KAF2542344.1 (hypothetical protein F2Q68_00032960 [Brassica cretica])

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 15  MLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFSQNLTNITCPKNLMN 74
           ML+L H  L++SY ++A VNRI +   SF+SQR+N   SLFFRN ++ LT++   K  ++
Sbjct: 1   MLRLKHLLLRRSYGSDATVNRILETNGSFVSQRVNGFLSLFFRNLTEKLTDLAGSKYFVD 60

Query: 75  FGKFLWLIRPKIRSKNTSGNTSSFQQFASCTR 107
           FG+       +IRS+N SG      +  SCTR
Sbjct: 61  FGESYGAASAEIRSENASGLCIVSSRSCSCTR 92

[Close]

BLAST of Cmc03g0063261 vs. ExPASy TrEMBL
Match: A0A4D6L218 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g2882 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.8e-19
Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 2   SVTSETGFSKSKIMLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFSQ 61
           ++TS+T  S  K++LKLHH  L++SY TN ++N +S+PGF  IS+RI  + SL   NF +
Sbjct: 114 NITSKTILSNGKVVLKLHHLPLKKSYGTNTSINGVSEPGFGIISERIRRVLSLLLGNFDE 173

Query: 62  NLTNITCPKNLMNFGKFLWLIRPKIRSKNTSGNTSSFQQFASCT 106
           +L +IT  +NL++ GKFL LIR K R K T G  SS Q+ A CT
Sbjct: 174 DLAHITGSENLVHLGKFLALIRTKARCKYTIGYASSLQELAGCT 217

[Close]

BLAST of Cmc03g0063261 vs. ExPASy TrEMBL
Match: A0A0S3S0W8 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G410700 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 9.2e-16
Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 2   SVTS-ETGFSKSKIMLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFS 61
           SVTS +T  S  +IMLKL H  LQQSY TNA++N +S+P    I +RI+ + SL FR+F 
Sbjct: 15  SVTSCKTVLSNGEIMLKLDHLPLQQSYGTNASINGVSEPCLGLIRERIDGVLSLLFRHFD 74

Query: 62  QNLTNITCPKNLMNFGKFLWLIRPKIRSKNTSG 94
           Q+L +I   KNL++ GK L LIRPK+R KNT G
Sbjct: 75  QDLADIAGSKNLVHLGKLLALIRPKVRCKNTIG 107

[Close]

BLAST of Cmc03g0063261 vs. ExPASy TrEMBL
Match: A0A371E7B3 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_59835 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.2e-12
Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 15 MLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFSQNLTNITCPKNLMN 74
          MLKLHH  LQ+SY TNA++NR+S+P  S I QRI+ + SL F + +Q+L +I   K+L++
Sbjct: 1  MLKLHHLPLQESYGTNASINRVSQPCLSLICQRIHCVLSLLFWHLNQDLAHIAGSKHLVH 60

Query: 75 FGKFLWLIRPKIRSKN 91
           GK L LIRPKI   N
Sbjct: 61 LGKLLALIRPKINVSN 76

[Close]

BLAST of Cmc03g0063261 vs. ExPASy TrEMBL
Match: A5BYK5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_008993 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-04
Identity = 34/105 (32.38%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 3   VTSETGFSKSKIMLKLHHFSLQQSYSTNAAVNRISKPGFSFISQRINSIFSLFFRNFSQN 62
           V  E  F  ++I L+L    L+     +AAVN +S+P  S ISQ ++ +F+L +  F + 
Sbjct: 165 VLGELRFGTAEIHLELAELVLEDRDDAHAAVNWVSEPHVSLISQGVDGVFALVWVQFVEK 224

Query: 63  LTNITCPKNLMNFGKFLWLIRPKIRSKNTSGNTSSFQQFASCTRR 108
           L ++   K+ ++ GK L L+R ++  K+T   T S ++   CT R
Sbjct: 225 LRHVAGTKHFVHVGKLLGLVRWEVWRKHTLRLTLSPEKLTCCTWR 269

The following BLAST results are available for this feature:

BLAST of Cmc03g0063261 vs. NCBI nr


Match Name	E-value	Identity	Description
QCD82542.1	1.4e-18	49.04	hypothetical protein DEO72_LG2g2882 [Vigna unguiculata]	[more]
BAT86454.1	1.9e-15	53.76	hypothetical protein VIGAN_04410700 [Vigna angularis var. angularis]	[more]
KAG2406717.1	2.0e-12	52.94	uncharacterized protein HKW66_Vig0059740 [Vigna angularis]	[more]
RDX61889.1	1.3e-11	52.63	hypothetical protein CR513_59835, partial [Mucuna pruriens]	[more]
KAF2542344.1	1.2e-09	42.39	hypothetical protein F2Q68_00032960 [Brassica cretica]	[more]

BLAST of Cmc03g0063261 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc03g0063261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4D6L218	6.8e-19	49.04	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g2882 PE=4 SV=1	[more]
A0A0S3S0W8	9.2e-16	53.76	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G...	[more]
A0A371E7B3	6.2e-12	52.63	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_59835 P...	[more]
A5BYK5	2.1e-04	32.38	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_008993 PE=4 SV=1	[more]

BLAST of Cmc03g0063261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0063261.1	Cmc03g0063261.1	mRNA