Cmc03g0063101 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0063101
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Zinc finger BED domain-containing protein DAYSLEEPER
Location	CMiso1.1chr03: 3476524 .. 3481105 (+)
RNA-Seq Expression	Cmc03g0063101
Synteny	Cmc03g0063101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATATATTTTCTTATCTCCTTTCTCTCTGCATCTCCACGAAAGGGCTCCAAAAACCCAATCTCAATCCTCTTCATCTCCACCTCTTCCGACTGGCCACACTTCTCATCGACAACTCGTCCTAGCTTCCCCCAAATGCCTCTTTTCATTTTTATCACATTTTGTTTTTACGTTCACGCCCCCCACCCTCCATTCGTGCATCTTGAGTTTTGGGAGATCGGCTTGCGGAAGACGCACTGTTTGAACGGTGTTTAATTGGCAAGTGCTTGAACGAGCTCGCAGTCGCTTTCACTTCTTGAGGTACTATTCTAACTTTTCTCCCAATTTTTCGCTTTCTTTTTTGGTTCCATCGCCTGAAGTTCACTACTGATCTCCTCTTTCCTCACCGACGACTCTCAGGTTTGTATTTCCTTGCCGATGATCCAAATTCATCTTTGATCTCAATTGATTTCACATTTCTTTTCTTCTTATCCAACTGACGATTCGCTAATTGACTAAATTTGTGGATTATTGCCTTGTTCGATTACTTTTTGGAGATATCTTGACGTAGAGGAGATTGTGGCCGCGACTACTATTCCGATAACTTATTGATTGAGGTATATACTTTCTGCATGACTAATGTTGATTCTTCTTCTTCTTTTCTTTTTCTTCTTCTTTTTATTTTATTTTACTATGTGTTATGAAACAGATCAATTTTCTAACTTTCTTTTTTATGGAACTTCTTCGGTCTCCCCCTCTTCTTCTTCCCTACTTCCGCTGCAGAACCCGTCATACCACCCGCTTCCAGTGATAGAGATGCCATCTCTTGTCTTGGATTATTTGATCCAGCCACCGCCTCAATCCCATTTCTGGTATCCCCTTGTCCTCCTGTTATGAATATTTGTGTACTTGTCTGTAATTAAAACAAAACCCAATTTGTTTTTCCAATCTCAATTCACCAAAGAATAAGAGGGGAGAAAATTTTGACAAATAAATAAATAAGCAATTTAAAAAGAGAAGAAATTAAGAGGTTCCATTCCATCGATGGGGGATTTAGATTTGACCTCCAAAGTGAAAATACAAATATCGAAATTGTTCTACTAAGCTCTGGTTTGTGGTTTGATGGCAGAGATATCAGAATTTAAGACCAAAAAACAGATTTTTTTTTCTTTTTCTTGTTTATTTTCTACAATTTTGTATATAACTTTCTTTTTCTTTACTTATTCTTGGAAAATCTTTTTTGCTAAGCTAATTCTGACTCTCCAAATTCCAATTTAAGATATATAAAATAATTTTTTTCAGTTTTTAATTAGACTGTTAATAATGGTTCAACTATGCTTACATAGGGCATTAAAGAGCATTTTCAGTTGTATGCCTACACATGTTATTTTAAGTTTCATCAGTTGTATCTTTATTACTTCAAAATGGTCAATTGATCACTCTTTCATAAATTCAGTTCTTAAAGTGGCATCATTGGTTTGTATCTTGTATAACTTTGTTTATTATTCATTTGATGGTAGATGATAGGAGGGATGATCCTTTGGGTCTCCTATCAAATTAATGGACCTACGAGAGGGTTGGTTTATGAAGTTACTGTTGATTATTCGTAACTATGTTTCCTATGCAATGGTTCATCATGAAGTGCTAAGAATTCAAGAAAACAAAGTGGAGTCGTTGACTTGGGAGGATTGGGAAGTTTTTAAAGGATTACCAGGTATAAAGTTTTTGTTCAATAATTAAAACTTTTTTTCACAATTATCTATCAAAATTATAGAGCAACCTGCTTAATTAAGAAATAGGAAATGACTTTGTTGATGAGTATTACTGATATACTTCCTGTGTATGAACCTTTGCTTGTGTGCTTTCTGAATAGTTGCAATCAAGTACAATTAAATTTGTTGTTATTGGCTTCTGTTGATGAAACAATATGAATAGAACCCCCATCCTCTCGAAGTGTTTTCCTCTTTTCTCCTACCCTCGAACCTTAACCTTCATCTGATTGGTTTCTTATGCGATTTTTGTTTAGAATTAAGCATCATCATCTGGTTTCATCTTTCTCAAATTTTTTTTCTTTGGGTAAAAGATCAACTTTCATTGAAAAAAAAAGGAATTTTTCCATGTCTTGGCAAAAAAGACTACAATGGGTTTAGCTTTCCCCTTGGTCTTACAGCTTCTTTAGAACAGCTAATCTCATGGAATATTATGCCCAACTTTACAACGTTTGAATGTTTACAAAACTCGTAGAATCAATTCTTTGTCCGTAGAAATATGAAAATGGAATGTATGTCCTCCAATTGTCTGATCTTTCTGATGGCATTACTAGATGATTTGTGTTATGGGTTTTATTCAATTCATGGGAAAAAACTCAGAGATCTAACCCCTTTATTAGGATGGGGGAAAACTCACTTTCTTGGGGTTAAAATAAGCAGAAAGGAGGTTAAGGGGAAACTCAATAATTTGCTGGCAAGAGGGTGTTTGATAGAATGCTACAATGATATATGAATATGTAATGTCTTCAAAACTCATTTGTTTACTTCAAGGATCTCTGTTTCTTTTAACAATTTTAGTGAAGAATCTAATAATGGAGGTAACTTATTGGTTGGGGTATGTATTTGATGTCTCTAGTAAGATCAAACTCAAACCATATGCAAGCTATTTTTCAATGCTAGATGATGAGCCTTTTGTTGTTGTTTGATGTGTTACAGTTTCAACTTGAAGTGGCTAGTAATGAATGAATGTTTCATCGATACTTTTTGTGCAAAGAAAGTTGATTTGACTCTCAAGGTTAACGATCTCTTATTTATTTTCTATCTATTGCTGTTTTGGTTTAATGCTAATCATACAATTGTTGGTTCAGTATAGTGGGCCATCAAAACATGTTCTTGCTTATGCTAACTAGTTAAGAGAAGATCCCTGATTTTTGGATATCCTAGTTCAAGTTTCTCCAACAATAGATGGCCATGCATTTTGAAAATTGATGTTGGGTTATAAGCCCTCACTTGTACAAGTAAGCAAAATAAATTTCTTTATGGTTGAGCCATTTGGAAATTATCAAGATCAAAGCTTCTTGTTGGTGCTCATTTTCAAAATCATTTTTACGACCCTTTTTAAGTTATTTGTAGCAATTTGAGGTCTTTATTGTAGCTTCTTGGACTATTTTCCCATATTTCTGTTCTTTTCTTCTGCTTTGTTCCTTTGTTAGGTTCTGTTTTCATTGTTTCTTTTTTCTTTTTATCTCTTCTTTCTTCAGATAAAACATGAAAAGTTGATACAGTACGCACTTGCCTTCGTAGTTTTTGCTTGATAATTGAGAAACAACTTCAATTGCTGTAGAAGTTAGGTTATAAGATTCATTTCTCTTCTACTTTCATTGGAGAAGTCTTTTGTTTCTTTTTCTATCTTCTAGCTCTACACATACTTTAGTACTCCAAGTAGTAATTTTTAATTTATGCTCCAGGTTGAACTCAACCAAGTGATGAGTATATTTATAATTTATTTTGTAGGTTGAACTCAACCAAACGTGCCATTTGTAGTTTCCAAGGTTGCGAGTCGTTTTTTTAAGTAAGATTAATTGTTATGTAAGTGACGTCTGTGAGTTTGCCAATTTTATTTTGAATTCTTGAATTGTTTACTTATTTTTTAGGAGAATTCTTGAATTGGTTCTCTAGTAGTTTCTCAGGATAGAAATGGTTTATTTGAGAATTCAAATCATACACTTTAGGTCGGGTATCGACTTTTCAAATGGATTTAGGTTCTTGGGAAATAACTAATGAAAGATTAACATGACTATAACAGCTTCTCTTTTGTAATAGGACTGAAAATTTGGTTTCGAGCTAGTTCTTCCTGCTCCACTGTTGCCAAATGTGGGGATGATGAAGAGAATCAAGTGGTTCCAATGTCGCCACCACCTCCAGTTTCGAGCTAGTTCTTCCTGCTCTCCATTGTTTCTTCTTCTTTGAATGATTTTAACTAGATCTTAAGAAATCTGAGGTAATGAGTAAATGTTTTCGCATTAATTATTATATTTAACTTGTCTTTAAATCTTATGAATGATAGTATACCTTTCTATGTTAATTTGTTTATGATGTATGGGGTTATAGAGATTATGATGATGAAGGAAAAATTTTCAAAATGGTTGCTTGTTGAAGATATGTCAAGCCATGGAAATAGTATTAACTTTTTAACTTTAAGATAGTCATAATTATTCTTGCAATAAGGAGTGATGTTAAATAAAATATGAGTTGCTAAATTTCAACACCTATTATAGAAAAGAATAATTTATTGCCAAGCTTAGAAGTTACTATTGTTGAAGTGTGTATGTGCTATGTTGTTGAAATGAATGTGTATTGTGTTGTTGAAGTGAATGTGCTATATTGTTGAATTGATTTTGTTTTCTTTTATTTTTTTACTAGGTTTTGCCCGAATCCATTGGAGCAGCGAAACCATATTTGTGGCAATTCATTGATGTATAGGCATTTTTGTAGGTTTGGTAGGAAAATTTCCGGTTTAAATGTACTTATTTAAATAGCTAGCTTGTTCGTAACAAACCATATATGTATCAACACTTAAAGTGATATTATAAAGTGTATGTTTCTTTATATCAA

mRNA sequence

TTATATATTTTCTTATCTCCTTTCTCTCTGCATCTCCACGAAAGGGCTCCAAAAACCCAATCTCAATCCTCTTCATCTCCACCTCTTCCGACTGGCCACACTTCTCATCGACAACTCGTCCTAGCTTCCCCCAAATGCCTCTTTTCATTTTTATCACATTTTGTTTTTACGTTCACGCCCCCCACCCTCCATTCGTGCATCTTGAGTTTTGGGAGATCGGCTTGCGGAAGACGCACTGTTTGAACGGTGTTTAATTGGCAAGTGCTTGAACGAGCTCGCAGTCGCTTTCACTTCTTGAGATATCTTGACGTAGAGGAGATTGTGGCCGCGACTACTATTCCGATAACTTATTGATTGAGAACCCGTCATACCACCCGCTTCCAGTGATAGAGATGCCATCTCTTGTCTTGGATTATTTGATCCAGCCACCGCCTCAATCCCATTTCTGATGATAGGAGGGATGATCCTTTGGGTCTCCTATCAAATTAATGGACCTACGAGAGGGTTGGTTTATGAAGTTACTGTTGATTATTCGTAACTATGTTTCCTATGCAATGGTTCATCATGAAGTGCTAAGAATTCAAGAAAACAAAGTGGAGTCGTTGACTTGGGAGGATTGGGAAGTTTTTAAAGGATTACCAGTTTCAACTTGAAGTGGCTAGTAATGAATGAATGTTTCATCGATACTTTTTGTGCAAAGAAAGTTGATTTGACTCTCAAGGTTGAACTCAACCAAACGTGCCATTTGTAGTTTCCAAGGTTGCGAGTCGTTTTTTTAAGACTGAAAATTTGGTTTCGAGCTAGTTCTTCCTGCTCCACTGTTGCCAAATGTGGGGATGATGAAGAGAATCAAGTGGTTCCAATGTCGCCACCACCTCCAGTTTCGAGCTAGTTCTTCCTGCTCTCCATTGTTTCTTCTTCTTTGAATGATTTTAACTAGATCTTAAGAAATCTGAGGTTTTGCCCGAATCCATTGGAGCAGCGAAACCATATTTGTGGCAATTCATTGATGTATAGGCATTTTTGTAGGTTTGGTAGGAAAATTTCCGGTTTAAATGTACTTATTTAAATAGCTAGCTTGTTCGTAACAAACCATATATGTATCAACACTTAAAGTGATATTATAAAGTGTATGTTTCTTTATATCAA

Coding sequence (CDS)

ATGGACCTACGAGAGGGTTGGTTTATGAAGTTACTGTTGATTATTCGTAACTATGTTTCCTATGCAATGGTTCATCATGAAGTGCTAAGAATTCAAGAAAACAAAGTGGAGTCGTTGACTTGGGAGGATTGGGAAGTTTTTAAAGGATTACCAGTTTCAACTTGA

Protein sequence

MDLREGWFMKLLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLPVST

Homology

[Close]

BLAST of Cmc03g0063101 vs. NCBI nr
Match: KAA0035010.1 (zinc finger BED domain-containing protein DAYSLEEPER [Cucumis melo var. makuwa] >TYK02350.1 zinc finger BED domain-containing protein DAYSLEEPER [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 4.0e-14
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 11 LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLP 52
          LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLP
Sbjct: 53 LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLP 93

[Close]

BLAST of Cmc03g0063101 vs. ExPASy TrEMBL
Match: A0A5A7SVI9 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00440 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 11 LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLP 52
          LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLP
Sbjct: 53 LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLP 93

The following BLAST results are available for this feature:

BLAST of Cmc03g0063101 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035010.1	4.0e-14	100.00	zinc finger BED domain-containing protein DAYSLEEPER [Cucumis melo var. makuwa] ...	[more]

BLAST of Cmc03g0063101 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc03g0063101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVI9	2.0e-14	100.00	Zinc finger BED domain-containing protein DAYSLEEPER OS=Cucumis melo var. makuwa...	[more]

BLAST of Cmc03g0063101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0063101.1	Cmc03g0063101.1	mRNA