Cmc03g0062501 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0062501
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 2774061 .. 2774486 (+)
RNA-Seq Expression	Cmc03g0062501
Synteny	Cmc03g0062501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCGTGCTAGAGAAGTACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATTCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTTGGAAACAGTTAGATGAGTTACTAAATGCAGGGTACATTAGGCCTGCAAAAGCTCCGTATAGGGCCCCGGTTCTTTTTCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAGCACACGGTTCGCAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAAGACTTACGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGA

mRNA sequence

ATGCGCGTGCTAGAGAAGTACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATTCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTTGGAAACAGTTAGATGAGTTACTAAATGCAGGGTACATTAGGCCTGCAAAAGCTCCGTATAGGGCCCCGGTTCTTTTTCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAGCACACGGTTCGCAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAAGACTTACGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGA

Coding sequence (CDS)

ATGCGCGTGCTAGAGAAGTACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATTCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTTGGAAACAGTTAGATGAGTTACTAAATGCAGGGTACATTAGGCCTGCAAAAGCTCCGTATAGGGCCCCGGTTCTTTTTCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAGCACACGGTTCGCAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAAGACTTACGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGA

Protein sequence

MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDELLNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGAKYFSKLRLTIGILPSENCRGR

Homology

[Close]

BLAST of Cmc03g0062501 vs. NCBI nr
Match: KAA0046544.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 2.1e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 609 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 668

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 669 LNAGFIRPAKAPYEAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 728

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 729 KYFSKLDLRSG 739

[Close]

BLAST of Cmc03g0062501 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 626 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 685

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 686 LNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 745

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 746 KYFSKLDLRSG 756

[Close]

BLAST of Cmc03g0062501 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 630 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 689

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 690 LNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 749

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 750 KYFSKLDLRSG 760

[Close]

BLAST of Cmc03g0062501 vs. NCBI nr
Match: KAA0063412.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 630 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 689

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 690 LNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 749

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 750 KYFSKLDLRSG 760

[Close]

BLAST of Cmc03g0062501 vs. NCBI nr
Match: KAA0032849.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 630 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 689

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 690 LNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 749

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 750 KYFSKLDLRSG 760

[Close]

BLAST of Cmc03g0062501 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-19
Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 0


Query: 5   EKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLD 64
           +KYR+++ + LP       ++P    + H+IE+ PGA+ P    Y +      E+ K + 
Sbjct: 562 QKYREIIRNDLPPRPADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 621

Query: 65  ELLNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLH 124
           +LL+  +I P+K+P  +PV+   KKDG+ RLC+DYR LNK T+ + +PLP I +L  R+ 
Sbjct: 622 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 681

Query: 125 GAKYFSKLRLTIG 132
            A+ F+ L L  G
Sbjct: 682 NAQIFTTLDLHSG 690

[Close]

BLAST of Cmc03g0062501 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-19
Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 0


Query: 5   EKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLD 64
           +KYR+++ + LP       ++P    + H+IE+ PGA+ P    Y +      E+ K + 
Sbjct: 588 QKYREIIRNDLPPRPADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 647

Query: 65  ELLNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLH 124
           +LL+  +I P+K+P  +PV+   KKDG+ RLC+DYR LNK T+ + +PLP I +L  R+ 
Sbjct: 648 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 707

Query: 125 GAKYFSKLRLTIG 132
            A+ F+ L L  G
Sbjct: 708 NAQIFTTLDLHSG 716

[Close]

BLAST of Cmc03g0062501 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-15
Identity = 42/128 (32.81%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 3   VLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNSYRMAPPELAELWKQLDEL 62
           + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ 
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDEINQG 436

Query: 63  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 122
           L +G IR +KA    PV+F  KK+G+LR+ +DY+ LNK+   N YPLP+I  L  ++ G+
Sbjct: 437 LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 496

Query: 123 KYFSKLRL 129
             F+KL L
Sbjct: 497 TIFTKLDL 503

[Close]

BLAST of Cmc03g0062501 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-15
Identity = 42/128 (32.81%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 3   VLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNSYRMAPPELAELWKQLDEL 62
           + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ 
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDEINQG 436

Query: 63  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 122
           L +G IR +KA    PV+F  KK+G+LR+ +DY+ LNK+   N YPLP+I  L  ++ G+
Sbjct: 437 LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 496

Query: 123 KYFSKLRL 129
             F+KL L
Sbjct: 497 TIFTKLDL 503

[Close]

BLAST of Cmc03g0062501 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-15
Identity = 42/128 (32.81%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 3   VLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNSYRMAPPELAELWKQLDEL 62
           + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ 
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDEINQG 436

Query: 63  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 122
           L +G IR +KA    PV+F  KK+G+LR+ +DY+ LNK+   N YPLP+I  L  ++ G+
Sbjct: 437 LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 496

Query: 123 KYFSKLRL 129
             F+KL L
Sbjct: 497 TIFTKLDL 503

[Close]

BLAST of Cmc03g0062501 vs. ExPASy TrEMBL
Match: A0A5A7TU11 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00640 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 609 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 668

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 669 LNAGFIRPAKAPYEAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 728

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 729 KYFSKLDLRSG 739

[Close]

BLAST of Cmc03g0062501 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 630 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 689

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 690 LNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 749

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 750 KYFSKLDLRSG 760

[Close]

BLAST of Cmc03g0062501 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 630 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 689

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 690 LNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 749

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 750 KYFSKLDLRSG 760

[Close]

BLAST of Cmc03g0062501 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 630 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 689

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 690 LNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 749

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 750 KYFSKLDLRSG 760

[Close]

BLAST of Cmc03g0062501 vs. ExPASy TrEMBL
Match: A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNSYRMAPPELAELWKQLDEL 60
           MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKN+YRMAPPELAEL KQLDEL
Sbjct: 630 MRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDEL 689

Query: 61  LNAGYIRPAKAPYRAPVLFQKKKDGSLRLCIDYRVLNKHTVRNKYPLPIITDLFDRLHGA 120
           LNAG+IRPAKAPY APVLFQ+KKDGSLRLCIDYR LNK TVRNKYPLPIITDLFDRLHGA
Sbjct: 690 LNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGA 749

Query: 121 KYFSKLRLTIG 132
           KYFSKL L  G
Sbjct: 750 KYFSKLDLRSG 760

The following BLAST results are available for this feature:

BLAST of Cmc03g0062501 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046544.1	2.1e-62	92.37	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	3.6e-62	92.37	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	3.6e-62	92.37	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]
KAA0063412.1	3.6e-62	92.37	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0032849.1	3.6e-62	92.37	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0062501 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	3.0e-19	36.84	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.0e-19	36.84	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	7.6e-15	32.81	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	7.6e-15	32.81	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	7.6e-15	32.81	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0062501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TU11	1.0e-62	92.37	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11...	[more]
A0A5D3C4R1	1.7e-62	92.37	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	1.7e-62	92.37	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UXR6	1.7e-62	92.37	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]
A0A5A7T0E2	1.7e-62	92.37	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]

BLAST of Cmc03g0062501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..141
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 25..104 e-value: 8.3E-37 score: 128.5
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 4..128
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 4..128
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 105..128 e-value: 8.3E-37 score: 128.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0062501.1	Cmc03g0062501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding