Cmc03g0062451 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0062451
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 2711739 .. 2712683 (+)
RNA-Seq Expression	Cmc03g0062451
Synteny	Cmc03g0062451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAAGGAAGATTGCTGCGATACGCGACTGGGTAGTGCCGAAATCAATCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGTCGATTTGTCAAGGGATTCTTCAAACGAGCAAGCCCACTGACTGAACTACTGAAAAAAGACGTTTACTGGAATTGGGACCCCGAGTGCCAAGCCGCCTTCGATGACCTAAAACAAGCCATGATGGAGGGGCCACTTCTCATGATTGCGGATGCGACCAAACCTTTCGAAGTTGAGATAGATGCGTCTGATTATGCGTTGGGGGGTGTGCTCCTGCAGAATGGGCACCCGATCGCATATGAAAGTCGAAAGTTGAATGCAGCCAAAAGGAGGTTTACTGTGTCCGAGAAAGAAATGCTCGCAGTTGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTCGTCATTTGTAGTGAAGACGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTCGAAACAAGCAAGATGGCAGGAATTTCTAGCAGAGTTCGACTTCGAATTTGAACATAAGAAGGGGTCGAGCAACCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATGCATCCATATGCCTGTTAGCTCACCTCCGGGGAAGCGAGATTGGTGGGTCGGTTAGAGACACCTTAAGAGAGTTCCTACAGAAAGATCATGTCGCACAGAATGTCATGAATTTAGTGAAGGCGGGCAAAACACGACATTTTTGGGTCGAGGAAGACTTGTTAGTCACAAAGGACAATCGACTATATGTTCCTAGAGCAGGGGACTTAAGCAAGAAATTGTTGTATGAGTGTCACGACACTCTATGGACTGGCCATCCCGGATGGCAGCGGATGTACGCCTTGTTGAAGAAGGGCTACTTTTGGCCGAATATGAGAGATGATGTCATGTAG

mRNA sequence

ATGGAAGAAAGGAAGATTGCTGCGATACGCGACTGGGTAGTGCCGAAATCAATCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGTCGATTTGTCAAGGGATTCTTCAAACGAGCAAGCCCACTGACTGAACTACTGAAAAAAGACGTTTACTGGAATTGGGACCCCGAGTGCCAAGCCGCCTTCGATGACCTAAAACAAGCCATGATGGAGGGGCCACTTCTCATGATTGCGGATGCGACCAAACCTTTCGAAGTTGAGATAGATGCGTCTGATTATGCGTTGGGGGGTGTGCTCCTGCAGAATGGGCACCCGATCGCATATGAAAGTCGAAAGTTGAATGCAGCCAAAAGGAGGTTTACTGTGTCCGAGAAAGAAATGCTCGCAGTTGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTCGTCATTTGTAGTGAAGACGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTCGAAACAAGCAAGATGGCAGGAATTTCTAGCAGAGTTCGACTTCGAATTTGAACATAAGAAGGGGTCGAGCAACCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATGCATCCATATGCCTGTTAGCTCACCTCCGGGGAAGCGAGATTGGTGGGTCGGTTAGAGACACCTTAAGAGAGTTCCTACAGAAAGATCATGTCGCACAGAATGTCATGAATTTAGTGAAGGCGGGCAAAACACGACATTTTTGGGTCGAGGAAGACTTGTTAGTCACAAAGGACAATCGACTATATGTTCCTAGAGCAGGGGACTTAAGCAAGAAATTGTTGTATGAGTGTCACGACACTCTATGGACTGGCCATCCCGGATGGCAGCGGATGTACGCCTTGTTGAAGAAGGGCTACTTTTGGCCGAATATGAGAGATGATGTCATGTAG

Coding sequence (CDS)

ATGGAAGAAAGGAAGATTGCTGCGATACGCGACTGGGTAGTGCCGAAATCAATCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGTCGATTTGTCAAGGGATTCTTCAAACGAGCAAGCCCACTGACTGAACTACTGAAAAAAGACGTTTACTGGAATTGGGACCCCGAGTGCCAAGCCGCCTTCGATGACCTAAAACAAGCCATGATGGAGGGGCCACTTCTCATGATTGCGGATGCGACCAAACCTTTCGAAGTTGAGATAGATGCGTCTGATTATGCGTTGGGGGGTGTGCTCCTGCAGAATGGGCACCCGATCGCATATGAAAGTCGAAAGTTGAATGCAGCCAAAAGGAGGTTTACTGTGTCCGAGAAAGAAATGCTCGCAGTTGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTCGTCATTTGTAGTGAAGACGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTCGAAACAAGCAAGATGGCAGGAATTTCTAGCAGAGTTCGACTTCGAATTTGAACATAAGAAGGGGTCGAGCAACCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATGCATCCATATGCCTGTTAGCTCACCTCCGGGGAAGCGAGATTGGTGGGTCGGTTAGAGACACCTTAAGAGAGTTCCTACAGAAAGATCATGTCGCACAGAATGTCATGAATTTAGTGAAGGCGGGCAAAACACGACATTTTTGGGTCGAGGAAGACTTGTTAGTCACAAAGGACAATCGACTATATGTTCCTAGAGCAGGGGACTTAAGCAAGAAATTGTTGTATGAGTGTCACGACACTCTATGGACTGGCCATCCCGGATGGCAGCGGATGTACGCCTTGTTGAAGAAGGGCTACTTTTGGCCGAATATGAGAGATGATGTCATGTAG

Protein sequence

MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPECQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAKRRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNVMNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALLKKGYFWPNMRDDVM

Homology

[Close]

BLAST of Cmc03g0062451 vs. NCBI nr
Match: TYK01597.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 608.2 bits (1567), Expect = 4.0e-170
Identity = 290/314 (92.36%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 855  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 914

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQAAFD LKQAMMEGPLL IAD TKPFEVE DAS+YALGGVLLQNGHPI YESRKLN A+
Sbjct: 915  CQAAFDGLKQAMMEGPLLGIADVTKPFEVETDASNYALGGVLLQNGHPITYESRKLNVAE 974

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 975  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1034

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGS+NQAADALSRKQEHA+ICLLAHLRGSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1035 FDFEFEHKKGSNNQAADALSRKQEHAAICLLAHLRGSEIGGSVRDTLREFLQKDHAAQNV 1094

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNLVKAGKTR FWVEEDLLVTK NRLYVPRAGDL KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1095 MNLVKAGKTRQFWVEEDLLVTKGNRLYVPRAGDLRKKLLYECHDTLWAGHPGWQRTYALL 1154

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1155 KKGYFWPNMRDDVM 1168

[Close]

BLAST of Cmc03g0062451 vs. NCBI nr
Match: TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 607.4 bits (1565), Expect = 6.7e-170
Identity = 290/314 (92.36%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 846  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 905

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQAAFD LKQA+MEGPLL IAD TKPFEVE DASDYALGGVLLQNGHPIAYESRKLNAA+
Sbjct: 906  CQAAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAE 965

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 966  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1025

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGSSNQAADALSRKQEHA+ICLLAHL+GSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1026 FDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNV 1085

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNL KAGKTR FWVEEDLLVTK NRLYVPRAG L KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1086 MNLAKAGKTRQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALL 1145

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1146 KKGYFWPNMRDDVM 1159

[Close]

BLAST of Cmc03g0062451 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 605.9 bits (1561), Expect = 2.0e-169
Identity = 289/314 (92.04%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 872  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 931

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQ AFD LKQA+MEGPLL IAD TKPFEVE DASDYALGGVLLQNGHPIAYESRKLNAA+
Sbjct: 932  CQTAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAE 991

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 992  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1051

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGSSNQAADALSRKQEHA+ICLLAHL+GSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1052 FDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNV 1111

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNL KAGKTR FWVEEDLLVTK NRLYVPRAG L KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1112 MNLAKAGKTRQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALL 1171

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1172 KKGYFWPNMRDDVM 1185

[Close]

BLAST of Cmc03g0062451 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 605.9 bits (1561), Expect = 2.0e-169
Identity = 289/314 (92.04%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 876  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 935

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQ AFD LKQA+MEGPLL IAD TKPFEVE DASDYALGGVLLQNGHPIAYESRKLNAA+
Sbjct: 936  CQTAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAE 995

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 996  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1055

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGSSNQAADALSRKQEHA+ICLLAHL+GSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1056 FDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNV 1115

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNL KAGKTR FWVEEDLLVTK NRLYVPRAG L KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1116 MNLAKAGKTRQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALL 1175

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1176 KKGYFWPNMRDDVM 1189

[Close]

BLAST of Cmc03g0062451 vs. NCBI nr
Match: KAA0063412.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 605.9 bits (1561), Expect = 2.0e-169
Identity = 289/314 (92.04%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 876  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 935

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQ AFD LKQA+MEGPLL IAD TKPFEVE DASDYALGGVLLQNGHPIAYESRKLNAA+
Sbjct: 936  CQTAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAE 995

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 996  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1055

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGSSNQAADALSRKQEHA+ICLLAHL+GSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1056 FDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNV 1115

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNL KAGKTR FWVEEDLLVTK NRLYVPRAG L KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1116 MNLAKAGKTRQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALL 1175

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1176 KKGYFWPNMRDDVM 1189

[Close]

BLAST of Cmc03g0062451 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-39
Identity = 99/331 (29.91%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 3   ERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPECQ 62
           +  I  +  W  PK+  ELR FLG  NY R+F+    +   PL  LLKKDV W W P   
Sbjct: 624 QENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQT 683

Query: 63  AAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNG-----HPIAYESRKLN 122
            A +++KQ ++  P+L   D +K   +E DASD A+G VL Q       +P+ Y S K++
Sbjct: 684 QAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMS 743

Query: 123 AAKRRFTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNSATCHFFT---QPKLTSKQA 182
            A+  ++VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + A
Sbjct: 744 KAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLA 803

Query: 183 RWQEFLAEFDFEFEHKKGSSNQAADALSR----------KQEHASICLLAHLRGSEIGGS 242
           RWQ FL +F+FE  ++ GS+N  ADALSR            E  SI  +  +    I   
Sbjct: 804 RWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQI---SITDD 863

Query: 243 VRDTLREFLQKDHVAQNVMNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYEC 302
            ++ +      D    N++N        +  +++ LL+   +++ +P    L++ ++ + 
Sbjct: 864 FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 923

Query: 303 HDTLWTGHPGWQRMYALLKKGYFWPNMRDDV 314
           H+     HPG + +  ++ + + W  +R  +
Sbjct: 924 HEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

[Close]

BLAST of Cmc03g0062451 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-39
Identity = 99/331 (29.91%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 3   ERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPECQ 62
           +  I  +  W  PK+  ELR FLG  NY R+F+    +   PL  LLKKDV W W P   
Sbjct: 624 QENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQT 683

Query: 63  AAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNG-----HPIAYESRKLN 122
            A +++KQ ++  P+L   D +K   +E DASD A+G VL Q       +P+ Y S K++
Sbjct: 684 QAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMS 743

Query: 123 AAKRRFTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNSATCHFFT---QPKLTSKQA 182
            A+  ++VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + A
Sbjct: 744 KAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLA 803

Query: 183 RWQEFLAEFDFEFEHKKGSSNQAADALSR----------KQEHASICLLAHLRGSEIGGS 242
           RWQ FL +F+FE  ++ GS+N  ADALSR            E  SI  +  +    I   
Sbjct: 804 RWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQI---SITDD 863

Query: 243 VRDTLREFLQKDHVAQNVMNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYEC 302
            ++ +      D    N++N        +  +++ LL+   +++ +P    L++ ++ + 
Sbjct: 864 FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 923

Query: 303 HDTLWTGHPGWQRMYALLKKGYFWPNMRDDV 314
           H+     HPG + +  ++ + + W  +R  +
Sbjct: 924 HEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

[Close]

BLAST of Cmc03g0062451 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-39
Identity = 99/331 (29.91%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 3   ERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPECQ 62
           +  I  +  W  PK+  ELR FLG  NY R+F+    +   PL  LLKKDV W W P   
Sbjct: 624 QENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQT 683

Query: 63  AAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNG-----HPIAYESRKLN 122
            A +++KQ ++  P+L   D +K   +E DASD A+G VL Q       +P+ Y S K++
Sbjct: 684 QAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMS 743

Query: 123 AAKRRFTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNSATCHFFT---QPKLTSKQA 182
            A+  ++VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + A
Sbjct: 744 KAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLA 803

Query: 183 RWQEFLAEFDFEFEHKKGSSNQAADALSR----------KQEHASICLLAHLRGSEIGGS 242
           RWQ FL +F+FE  ++ GS+N  ADALSR            E  SI  +  +    I   
Sbjct: 804 RWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQI---SITDD 863

Query: 243 VRDTLREFLQKDHVAQNVMNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYEC 302
            ++ +      D    N++N        +  +++ LL+   +++ +P    L++ ++ + 
Sbjct: 864 FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 923

Query: 303 HDTLWTGHPGWQRMYALLKKGYFWPNMRDDV 314
           H+     HPG + +  ++ + + W  +R  +
Sbjct: 924 HEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

[Close]

BLAST of Cmc03g0062451 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-39
Identity = 99/331 (29.91%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 3   ERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPECQ 62
           +  I  +  W  PK+  ELR FLG  NY R+F+    +   PL  LLKKDV W W P   
Sbjct: 624 QENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQT 683

Query: 63  AAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNG-----HPIAYESRKLN 122
            A +++KQ ++  P+L   D +K   +E DASD A+G VL Q       +P+ Y S K++
Sbjct: 684 QAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMS 743

Query: 123 AAKRRFTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNSATCHFFT---QPKLTSKQA 182
            A+  ++VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + A
Sbjct: 744 KAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLA 803

Query: 183 RWQEFLAEFDFEFEHKKGSSNQAADALSR----------KQEHASICLLAHLRGSEIGGS 242
           RWQ FL +F+FE  ++ GS+N  ADALSR            E  SI  +  +    I   
Sbjct: 804 RWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQI---SITDD 863

Query: 243 VRDTLREFLQKDHVAQNVMNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYEC 302
            ++ +      D    N++N        +  +++ LL+   +++ +P    L++ ++ + 
Sbjct: 864 FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 923

Query: 303 HDTLWTGHPGWQRMYALLKKGYFWPNMRDDV 314
           H+     HPG + +  ++ + + W  +R  +
Sbjct: 924 HEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

[Close]

BLAST of Cmc03g0062451 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-39
Identity = 99/331 (29.91%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 3   ERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPECQ 62
           +  I  +  W  PK+  ELR FLG  NY R+F+    +   PL  LLKKDV W W P   
Sbjct: 624 QENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQT 683

Query: 63  AAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNG-----HPIAYESRKLN 122
            A +++KQ ++  P+L   D +K   +E DASD A+G VL Q       +P+ Y S K++
Sbjct: 684 QAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMS 743

Query: 123 AAKRRFTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNSATCHFFT---QPKLTSKQA 182
            A+  ++VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + A
Sbjct: 744 KAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLA 803

Query: 183 RWQEFLAEFDFEFEHKKGSSNQAADALSR----------KQEHASICLLAHLRGSEIGGS 242
           RWQ FL +F+FE  ++ GS+N  ADALSR            E  SI  +  +    I   
Sbjct: 804 RWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQI---SITDD 863

Query: 243 VRDTLREFLQKDHVAQNVMNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYEC 302
            ++ +      D    N++N        +  +++ LL+   +++ +P    L++ ++ + 
Sbjct: 864 FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 923

Query: 303 HDTLWTGHPGWQRMYALLKKGYFWPNMRDDV 314
           H+     HPG + +  ++ + + W  +R  +
Sbjct: 924 HEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

[Close]

BLAST of Cmc03g0062451 vs. ExPASy TrEMBL
Match: A0A5D3BQE4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001890 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 1.9e-170
Identity = 290/314 (92.36%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 855  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 914

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQAAFD LKQAMMEGPLL IAD TKPFEVE DAS+YALGGVLLQNGHPI YESRKLN A+
Sbjct: 915  CQAAFDGLKQAMMEGPLLGIADVTKPFEVETDASNYALGGVLLQNGHPITYESRKLNVAE 974

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 975  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1034

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGS+NQAADALSRKQEHA+ICLLAHLRGSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1035 FDFEFEHKKGSNNQAADALSRKQEHAAICLLAHLRGSEIGGSVRDTLREFLQKDHAAQNV 1094

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNLVKAGKTR FWVEEDLLVTK NRLYVPRAGDL KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1095 MNLVKAGKTRQFWVEEDLLVTKGNRLYVPRAGDLRKKLLYECHDTLWAGHPGWQRTYALL 1154

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1155 KKGYFWPNMRDDVM 1168

[Close]

BLAST of Cmc03g0062451 vs. ExPASy TrEMBL
Match: A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.3e-170
Identity = 290/314 (92.36%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 846  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 905

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQAAFD LKQA+MEGPLL IAD TKPFEVE DASDYALGGVLLQNGHPIAYESRKLNAA+
Sbjct: 906  CQAAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAE 965

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 966  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1025

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGSSNQAADALSRKQEHA+ICLLAHL+GSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1026 FDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNV 1085

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNL KAGKTR FWVEEDLLVTK NRLYVPRAG L KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1086 MNLAKAGKTRQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALL 1145

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1146 KKGYFWPNMRDDVM 1159

[Close]

BLAST of Cmc03g0062451 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.5e-170
Identity = 289/314 (92.04%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 876  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 935

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQ AFD LKQA+MEGPLL IAD TKPFEVE DASDYALGGVLLQNGHPIAYESRKLNAA+
Sbjct: 936  CQTAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAE 995

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 996  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1055

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGSSNQAADALSRKQEHA+ICLLAHL+GSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1056 FDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNV 1115

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNL KAGKTR FWVEEDLLVTK NRLYVPRAG L KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1116 MNLAKAGKTRQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALL 1175

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1176 KKGYFWPNMRDDVM 1189

[Close]

BLAST of Cmc03g0062451 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.5e-170
Identity = 289/314 (92.04%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 876  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 935

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQ AFD LKQA+MEGPLL IAD TKPFEVE DASDYALGGVLLQNGHPIAYESRKLNAA+
Sbjct: 936  CQTAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAE 995

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 996  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1055

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGSSNQAADALSRKQEHA+ICLLAHL+GSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1056 FDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNV 1115

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNL KAGKTR FWVEEDLLVTK NRLYVPRAG L KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1116 MNLAKAGKTRQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALL 1175

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1176 KKGYFWPNMRDDVM 1189

[Close]

BLAST of Cmc03g0062451 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.5e-170
Identity = 289/314 (92.04%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1    MEERKIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPE 60
            MEE KIAAIRDW +PKS+SELRSFLGLANYYRRFV+GF KRASPLTELLKKDV+WNWDPE
Sbjct: 876  MEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPE 935

Query: 61   CQAAFDDLKQAMMEGPLLMIADATKPFEVEIDASDYALGGVLLQNGHPIAYESRKLNAAK 120
            CQ AFD LKQA+MEGPLL IAD TKPFEVE DASDYALGGVLLQNGHPIAYESRKLNAA+
Sbjct: 936  CQTAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAE 995

Query: 121  RRFTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 180
            RR+TVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE
Sbjct: 996  RRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAE 1055

Query: 181  FDFEFEHKKGSSNQAADALSRKQEHASICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNV 240
            FDFEFEHKKGSSNQAADALSRKQEHA+ICLLAHL+GSEIGGSVRDTLREFLQKDH AQNV
Sbjct: 1056 FDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNV 1115

Query: 241  MNLVKAGKTRHFWVEEDLLVTKDNRLYVPRAGDLSKKLLYECHDTLWTGHPGWQRMYALL 300
            MNL KAGKTR FWVEEDLLVTK NRLYVPRAG L KKLLYECHDTLW GHPGWQR YALL
Sbjct: 1116 MNLAKAGKTRQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALL 1175

Query: 301  KKGYFWPNMRDDVM 315
            KKGYFWPNMRDDVM
Sbjct: 1176 KKGYFWPNMRDDVM 1189

[Close]

BLAST of Cmc03g0062451 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.3e-13
Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 5   KIAAIRDWVVPKSISELRSFLGLANYYRRFVKGFFKRASPLTELLKKDVYWNWDPECQAA 64
           K+ A+  W  PK+ +ELR FLGL  YYRRFVK + K   PLTELLKK+    W      A
Sbjct: 50  KLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSL-KWTEMAALA 109

Query: 65  FDDLKQAMMEGPLLMIADATKPFEVEI 92
           F  LK A+   P+L + D   PF   +
Sbjct: 110 FKALKGAVTTLPVLALPDLKLPFVTRV 135

The following BLAST results are available for this feature:

BLAST of Cmc03g0062451 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01597.1	4.0e-170	92.36	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK07954.1	6.7e-170	92.36	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	2.0e-169	92.04	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	2.0e-169	92.04	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]
KAA0063412.1	2.0e-169	92.04	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0062451 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	7.5e-39	29.91	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	7.5e-39	29.91	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	7.5e-39	29.91	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	7.5e-39	29.91	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	7.5e-39	29.91	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0062451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQE4	1.9e-170	92.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5D3C9P8	3.3e-170	92.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5D3C4R1	9.5e-170	92.04	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	9.5e-170	92.04	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UXR6	9.5e-170	92.04	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]

BLAST of Cmc03g0062451 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.3e-13	44.83	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 235..314 e-value: 6.7E-14 score: 53.9
None	No IPR available	PANTHER	PTHR24559:SF360	SUBFAMILY NOT NAMED	coord: 1..310
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..310
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 88..202 e-value: 4.21509E-57 score: 178.455
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 3..92 e-value: 6.6E-28 score: 98.6
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 57..151 e-value: 2.8E-32 score: 110.7
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 274..313 e-value: 7.2E-12 score: 45.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 93..211 e-value: 9.9E-6 score: 27.4
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0062451.1	Cmc03g0062451.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding