Cmc03g0062421 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0062421
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr03: 2644480 .. 2645400 (+)
RNA-Seq Expression	Cmc03g0062421
Synteny	Cmc03g0062421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAACCGAGTTAAAGGAGCTGAAGGTACAGCTACAGAAGTTGCTGGACAAGGGTTTCATTCGACCCAGTGTGTCACCTTGGGGAGTCCCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTGGCATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCAAGGATTGATGACTTGTTCGACCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTACGATCAGGCTACCACCAGTTGAAGATCAGGGACAGTGACATTCCGAAGACGGCCTTTCGTTCGAGATACGGACATTACGAGTTCATTTTGATGTCTTTTGGGTTGACTAATGCCCCTGCGGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGTTGACATCTTGGTTTACTCCAAGACTGAGGCTGAACATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATTTTTCCTTGGACATGTGGTGTCCAACGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTGACCAACTGGCCTCAACCGTCTACAGTTAGTGAGATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAACCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAACATGCGAGAGTAGTTTCCAGGAGCTTAAGCAGAAGCTGGTGACTACACCAGTCCTGACAGTGTCCGATGGGTCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTTATGATGCAGTAA

mRNA sequence

ATGGCTCCAACCGAGTTAAAGGAGCTGAAGGTACAGCTACAGAAGTTGCTGGACAAGGGTTTCATTCGACCCAGTGTGTCACCTTGGGGAGTCCCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTGGCATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCAAGGATTGATGACTTGTTCGACCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTACGATCAGGCTACCACCAGTTGAAGATCAGGGACAGTGACATTCCGAAGACGGCCTTTCGTTCGAGATACGGACATTACGAGTTCATTTTGATGTCTTTTGGGTTGACTAATGCCCCTGCGGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGTTGACATCTTGGTTTACTCCAAGACTGAGGCTGAACATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATTTTTCCTTGGACATGTGGTGTCCAACGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTGACCAACTGGCCTCAACCGTCTACAGTTAGTGAGATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAACCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAACATGCGAGAGTAGTTTCCAGGAGCTTAAGCAGAAGCTGGTGACTACACCAGTCCTGACAGTGTCCGATGGGTCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTTATGATGCAGTAA

Coding sequence (CDS)

ATGGCTCCAACCGAGTTAAAGGAGCTGAAGGTACAGCTACAGAAGTTGCTGGACAAGGGTTTCATTCGACCCAGTGTGTCACCTTGGGGAGTCCCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTGGCATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCAAGGATTGATGACTTGTTCGACCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTACGATCAGGCTACCACCAGTTGAAGATCAGGGACAGTGACATTCCGAAGACGGCCTTTCGTTCGAGATACGGACATTACGAGTTCATTTTGATGTCTTTTGGGTTGACTAATGCCCCTGCGGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGTTGACATCTTGGTTTACTCCAAGACTGAGGCTGAACATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATTTTTCCTTGGACATGTGGTGTCCAACGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTGACCAACTGGCCTCAACCGTCTACAGTTAGTGAGATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAACCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAACATGCGAGAGTAGTTTCCAGGAGCTTAAGCAGAAGCTGGTGACTACACCAGTCCTGACAGTGTCCGATGGGTCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTTATGATGCAGTAA

Protein sequence

MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFSKCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDFSRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGLGCVMMQ

Homology

[Close]

BLAST of Cmc03g0062421 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 580.9 bits (1496), Expect = 6.6e-162
Identity = 285/306 (93.14%), Postives = 296/306 (96.73%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVTVKNR
Sbjct: 559 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 618

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRDSDIPKTAFR RYGHYEFI+MSFGLT
Sbjct: 619 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIVMSFGLT 678

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDFLDSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN+LYAKFS
Sbjct: 679 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 738

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 739 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 798

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTR+GTPFVWSPTCESSFQ+LKQKLVT PVLTV DGSGSFVIYSDASKKGL
Sbjct: 799 SRIASPLTQLTREGTPFVWSPTCESSFQKLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 858

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 859 GCVLMQ 864

[Close]

BLAST of Cmc03g0062421 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 579.3 bits (1492), Expect = 1.9e-161
Identity = 283/306 (92.48%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVTVKNR
Sbjct: 137 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 196

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRD DIPKTAFRSRYGHYEF++MSFGLT
Sbjct: 197 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 256

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDFLDSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN+LYAKFS
Sbjct: 257 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 316

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 317 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 376

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTRKGTPFVWSP CE SFQELKQKLVT PVLTV DGSG+FVIYSDASKKGL
Sbjct: 377 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 436

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 437 GCVLMQ 442

[Close]

BLAST of Cmc03g0062421 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 578.9 bits (1491), Expect = 2.5e-161
Identity = 283/306 (92.48%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVTVKNR
Sbjct: 606 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 665

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRD DIPKTAFRSRYGHYEF++MSFGLT
Sbjct: 666 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 725

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDFLDSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN LYAKFS
Sbjct: 726 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANNLYAKFS 785

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEI+SFLGLAGYYRRFVEDF
Sbjct: 786 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDF 845

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTRKGTPFVWSP CESSFQELKQKLVT PVLTV DGSG+FVIYSDASKKGL
Sbjct: 846 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 905

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 906 GCVLMQ 911

[Close]

BLAST of Cmc03g0062421 vs. NCBI nr
Match: KAA0058812.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 578.2 bits (1489), Expect = 4.3e-161
Identity = 281/306 (91.83%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVT+KNR
Sbjct: 486 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNR 545

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRD DIPKTAF SRYGHYEF++MSFGLT
Sbjct: 546 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRYGHYEFVVMSFGLT 605

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDF+DSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN+LYAKFS
Sbjct: 606 NAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 665

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 666 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 725

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTRKGTPFVWSP CESSFQELKQKLVT PVLTV DGSG+FVIYSDASKKGL
Sbjct: 726 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 785

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 786 GCVLMQ 791

[Close]

BLAST of Cmc03g0062421 vs. NCBI nr
Match: KAA0032541.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 577.8 bits (1488), Expect = 5.6e-161
Identity = 282/306 (92.16%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVTVKNR
Sbjct: 571 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 630

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRD DIPKTAFRSRYGHY+F++MSFGLT
Sbjct: 631 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYKFVVMSFGLT 690

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDFLDSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN+LYAKFS
Sbjct: 691 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 750

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 751 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 810

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTRKGTPFVWSP CE SFQELKQKLVT PVLTV DGSG+FVIYSDASKKGL
Sbjct: 811 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 870

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 871 GCVLMQ 876

[Close]

BLAST of Cmc03g0062421 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.1e-62
Identity = 119/306 (38.89%), Postives = 192/306 (62.75%), Query Frame = 0


Query: 7   KELKVQLQKLLDKGFIRPSVSPWGVPVLFV-KKKDGS----MRLGIDYRELNKVTVKNRY 66
           +E++ Q+Q +L++G IR S SP+  P+  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+++    + KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFSK 186
           APA F   MN + +  L+   +V++ DI+V+S +  EH + L  V E L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDFS 246
           CEF  ++  FLGHV++ +G+  +P KIEA+  +P P+   EI++FLGL GYYR+F+ +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RITSPLTQLTRKGTPF-VWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 306
            I  P+T+  +K       +P  +S+F++LK  +   P+L V D +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

[Close]

BLAST of Cmc03g0062421 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.6e-60
Identity = 115/312 (36.86%), Postives = 188/312 (60.26%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKD-----GSMRLGIDYRELNKV 60
           +A T   E++ Q+Q++L++G IR S SP+  P   V KK         R+ IDYR+LN++
Sbjct: 214 LAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEI 273

Query: 61  TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILM 120
           T+ +RYP+P +D++  +L     F+ IDL  G+HQ+++ +  I KTAF ++ GHYE++ M
Sbjct: 274 TIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRM 333

Query: 121 SFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRL 180
            FGL NAPA F   MN + +  L+   +V++ DI+++S +  EH   ++ V   L    L
Sbjct: 334 PFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANL 393

Query: 181 YAKFSKCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRR 240
             +  KCEF  K+  FLGH+V+ +G+  +P K++A+ ++P P+   EIR+FLGL GYYR+
Sbjct: 394 KLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRK 453

Query: 241 FVEDFSRITSPLTQLTRKGTPF-VWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSD 300
           F+ +++ I  P+T   +K T           +F++LK  ++  P+L + D    FV+ +D
Sbjct: 454 FIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTD 513

Query: 301 ASKKGLGCVMMQ 307
           AS   LG V+ Q
Sbjct: 514 ASNLALGAVLSQ 525

[Close]

BLAST of Cmc03g0062421 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.4e-60
Identity = 112/306 (36.60%), Postives = 187/306 (61.11%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +++R  D  K AFR   G +E+++M +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
            APA F   +N +  +  +S V+ ++ DIL++SK+E+EH +H++ VL+ L+   L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEF   +V F+G+ +S +G +     I+ V  W QP    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           S++T PL  L +K   + W+PT   + + +KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVMMQ 307
           G V+ Q
Sbjct: 720 GAVLSQ 725

[Close]

BLAST of Cmc03g0062421 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.4e-60
Identity = 112/306 (36.60%), Postives = 187/306 (61.11%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +++R  D  K AFR   G +E+++M +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
            APA F   +N +  +  +S V+ ++ DIL++SK+E+EH +H++ VL+ L+   L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEF   +V F+G+ +S +G +     I+ V  W QP    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           S++T PL  L +K   + W+PT   + + +KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVMMQ 307
           G V+ Q
Sbjct: 720 GAVLSQ 725

[Close]

BLAST of Cmc03g0062421 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.4e-60
Identity = 112/306 (36.60%), Postives = 187/306 (61.11%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +++R  D  K AFR   G +E+++M +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
            APA F   +N +  +  +S V+ ++ DIL++SK+E+EH +H++ VL+ L+   L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEF   +V F+G+ +S +G +     I+ V  W QP    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           S++T PL  L +K   + W+PT   + + +KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVMMQ 307
           G V+ Q
Sbjct: 720 GAVLSQ 725

[Close]

BLAST of Cmc03g0062421 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.2e-162
Identity = 285/306 (93.14%), Postives = 296/306 (96.73%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVTVKNR
Sbjct: 559 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 618

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRDSDIPKTAFR RYGHYEFI+MSFGLT
Sbjct: 619 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIVMSFGLT 678

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDFLDSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN+LYAKFS
Sbjct: 679 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 738

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 739 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 798

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTR+GTPFVWSPTCESSFQ+LKQKLVT PVLTV DGSGSFVIYSDASKKGL
Sbjct: 799 SRIASPLTQLTREGTPFVWSPTCESSFQKLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 858

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 859 GCVLMQ 864

[Close]

BLAST of Cmc03g0062421 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 9.3e-162
Identity = 283/306 (92.48%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVTVKNR
Sbjct: 137 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 196

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRD DIPKTAFRSRYGHYEF++MSFGLT
Sbjct: 197 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 256

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDFLDSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN+LYAKFS
Sbjct: 257 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 316

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 317 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 376

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTRKGTPFVWSP CE SFQELKQKLVT PVLTV DGSG+FVIYSDASKKGL
Sbjct: 377 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 436

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 437 GCVLMQ 442

[Close]

BLAST of Cmc03g0062421 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.2e-161
Identity = 283/306 (92.48%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVTVKNR
Sbjct: 606 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 665

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRD DIPKTAFRSRYGHYEF++MSFGLT
Sbjct: 666 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 725

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDFLDSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN LYAKFS
Sbjct: 726 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANNLYAKFS 785

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEI+SFLGLAGYYRRFVEDF
Sbjct: 786 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDF 845

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTRKGTPFVWSP CESSFQELKQKLVT PVLTV DGSG+FVIYSDASKKGL
Sbjct: 846 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 905

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 906 GCVLMQ 911

[Close]

BLAST of Cmc03g0062421 vs. ExPASy TrEMBL
Match: A0A5A7USG7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002890 PE=4 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 2.1e-161
Identity = 281/306 (91.83%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVT+KNR
Sbjct: 486 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNR 545

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IRD DIPKTAF SRYGHYEF++MSFGLT
Sbjct: 546 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRYGHYEFVVMSFGLT 605

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDF+DSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN+LYAKFS
Sbjct: 606 NAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 665

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 666 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 725

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTRKGTPFVWSP CESSFQELKQKLVT PVLTV DGSG+FVIYSDASKKGL
Sbjct: 726 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 785

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 786 GCVLMQ 791

[Close]

BLAST of Cmc03g0062421 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.7e-161
Identity = 282/306 (92.16%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MAPTELKELKVQLQKLLDKGFIRPSVSPWGVPVLFVKKKDGSMRLGIDYRELNKVTVKNR 60
           MAP ELKELKVQLQ+LLDKGFIRPSVSPWG PVLFVKKKDGSMRL IDYRELNKVTVKNR
Sbjct: 571 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 630

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIRDSDIPKTAFRSRYGHYEFILMSFGLT 120
           YPLP+IDDLFDQLQGATVFSKIDLRSGYHQL+IRD DIPKTAFRSRYGHYEF++MSFGLT
Sbjct: 631 YPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 690

Query: 121 NAPAVFMDLMNRVFKDFLDSFVIVFIVDILVYSKTEAEHEEHLRQVLETLRANRLYAKFS 180
           NAPAVFMDLMNRVFKDFLDSFVIVFI DIL+YSKTEAEHEEHL QVLETLRAN+LYAKFS
Sbjct: 691 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 750

Query: 181 KCEFWLKKVFFLGHVVSNEGVSVDPAKIEAVTNWPQPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KV FLGHVVS+EGVSVDPAKIEAVTNWP+PSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 751 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 810

Query: 241 SRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPVLTVSDGSGSFVIYSDASKKGL 300
           SRI SPLTQLTRKGTPFVWSP CESSFQELKQKLV  PVLTV DGSG+FVIYSDASKKGL
Sbjct: 811 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSGNFVIYSDASKKGL 870

Query: 301 GCVMMQ 307
           GCV+MQ
Sbjct: 871 GCVLMQ 876

[Close]

BLAST of Cmc03g0062421 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-26
Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 162 HLRQVLETLRANRLYAKFSKCEFWLKKVFFLG--HVVSNEGVSVDPAKIEAVTNWPQPST 221
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP+P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEIRSFLGLAGYYRRFVEDFSRITSPLTQLTRKGTPFVWSPTCESSFQELKQKLVTTPV 281
            +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVSDGSGSFV 291
           L + D    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc03g0062421 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01306.1	6.6e-162	93.14	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	1.9e-161	92.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040547.1	2.5e-161	92.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0058812.1	4.3e-161	91.83	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032541.1	5.6e-161	92.16	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0062421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	8.1e-62	38.89	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	2.6e-60	36.86	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	4.4e-60	36.60	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.4e-60	36.60	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	4.4e-60	36.60	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc03g0062421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSV9	3.2e-162	93.14	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5A7V6R2	9.3e-162	92.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5A7TG62	1.2e-161	92.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7USG7	2.1e-161	91.83	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33...	[more]
A0A5A7V4E4	2.7e-161	92.16	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]

BLAST of Cmc03g0062421 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.6e-26	42.75	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 6.7E-24 score: 84.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 8.2E-83 score: 278.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..294 e-value: 1.7E-31 score: 110.0
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 259..306 e-value: 3.2E-11 score: 43.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 8.2E-83 score: 278.9
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..306
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..306
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 1.57806E-92 score: 270.235
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0062421.1	Cmc03g0062421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding