Cmc03g0062341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0062341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr03: 2525962 .. 2526462 (-)
RNA-Seq Expression	Cmc03g0062341
Synteny	Cmc03g0062341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACATTGTTTTGTCTAGAGATGATCAGACAAAAATCAGTCAACTTAAACAGAGAATGGGTAATGAATTTGAAATCAAGGATTTGGGAAATTTGAAATATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTTCATGTCTCAGAGAAAATACACTTTTGATTTGCTAACCGAGACAGGTATGTTGAGATGTCTTCCTGCTAACACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAATTGATAAAGAACAATACCAGCGATTTGTAGGTAAATTGATTTACCTATCCCATATTCATCCTGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCGGGCTCCTTATGAGAAACACATGGAAGCTATCAACAGAGTTCTGAGATACTTGAAAACAACACCTAGTAAAGGGCTGATGTTTAAAAAAATAAACAGAAAGACCATTGAGGCATATACTGACTTAGATTAG

mRNA sequence

ATGGATGACATTGTTTTGTCTAGAGATGATCAGACAAAAATCAGTCAACTTAAACAGAGAATGGGTAATGAATTTGAAATCAAGGATTTGGGAAATTTGAAATATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTTCATGTCTCAGAGAAAATACACTTTTGATTTGCTAACCGAGACAGGTATGTTGAGATGTCTTCCTGCTAACACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAATTGATAAAGAACAATACCAGCGATTTGTAGGTAAATTGATTTACCTATCCCATATTCATCCTGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCGGGCTCCTTATGAGAAACACATGGAAGCTATCAACAGAGTTCTGAGATACTTGAAAACAACACCTAGTAAAGGGCTGATGTTTAAAAAAATAAACAGAAAGACCATTGAGGCATATACTGACTTAGATTAG

Coding sequence (CDS)

ATGGATGACATTGTTTTGTCTAGAGATGATCAGACAAAAATCAGTCAACTTAAACAGAGAATGGGTAATGAATTTGAAATCAAGGATTTGGGAAATTTGAAATATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTTCATGTCTCAGAGAAAATACACTTTTGATTTGCTAACCGAGACAGGTATGTTGAGATGTCTTCCTGCTAACACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAATTGATAAAGAACAATACCAGCGATTTGTAGGTAAATTGATTTACCTATCCCATATTCATCCTGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCGGGCTCCTTATGAGAAACACATGGAAGCTATCAACAGAGTTCTGAGATACTTGAAAACAACACCTAGTAAAGGGCTGATGTTTAAAAAAATAAACAGAAAGACCATTGAGGCATATACTGACTTAGATTAG

Protein sequence

MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLLTETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVSQFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD

Homology

[Close]

BLAST of Cmc03g0062341 vs. NCBI nr
Match: KAA0048527.1 (transportin-3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 294.3 bits (752), Expect = 6.7e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSK GIF+SQRKYT DLL
Sbjct: 975  VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKYGIFVSQRKYTLDLL 1034

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1035 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1094

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1095 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1140

[Close]

BLAST of Cmc03g0062341 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.7e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSKEGI +SQRKYT DLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc03g0062341 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.7e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSKEGI +SQRKYT DLL
Sbjct: 1263 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1322

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1323 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1382

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1383 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1428

[Close]

BLAST of Cmc03g0062341 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.7e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSKEGI +SQRKYT DLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc03g0062341 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.7e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSKEGI +SQRKYT DLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc03g0062341 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.4e-30
Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDI+++ +D T +      +   F +KD   L YFLG+E  R   G+ +SQR+Y  DLL
Sbjct: 1151 VDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLL 1210

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
              T M+   P  TP+  + KL         D  +Y+  VG L YL+   PDIS+AV+ +S
Sbjct: 1211 ARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLS 1270

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM  P E+H++A+ R+LRYL  TP+ G+  KK N  ++ AY+D D
Sbjct: 1271 QFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDAD 1316

[Close]

BLAST of Cmc03g0062341 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-28
Identity = 66/167 (39.52%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDI+++ +D   +      +   F +K+  +L YFLG+E  R  +G+ +SQR+YT DLL
Sbjct: 1134 VDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLL 1193

Query: 61   TETGMLRCLPANTPIEFNCKLG-NSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVV 120
              T ML   P  TP+  + KL  +S  ++P D  +Y+  VG L YL+   PD+S+AV+ +
Sbjct: 1194 ARTNMLTAKPVATPMATSPKLTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRL 1253

Query: 121  SQFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            SQ+M  P + H  A+ RVLRYL  TP  G+  KK N  ++ AY+D D
Sbjct: 1254 SQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDAD 1299

[Close]

BLAST of Cmc03g0062341 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24
Identity = 60/166 (36.14%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 1   MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
           +DDI+L+    T ++ L  ++ + F +KDLG + YFLG+++     G+F+SQ KY   +L
Sbjct: 7   VDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQIL 66

Query: 61  TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
              GML C P +TP+        S  + P D   ++  VG L YL+   PDIS+AV++V 
Sbjct: 67  NNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVC 126

Query: 121 QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
           Q M  P     + + RVLRY+K T   GL   K ++  ++A+ D D
Sbjct: 127 QRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171

[Close]

BLAST of Cmc03g0062341 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.3e-17
Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEG--IFMSQRKYTFD 60
            +DD+++   D+  I++LK  +   F++KDLG  +  LGM++ R +    +++SQ KY   
Sbjct: 1009 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIER 1068

Query: 61   LLTETGMLRCLPANTPIEFNCKLGNS------DDQVPIDKEQYQRFVGKLIY-LSHIHPD 120
            +L    M    P +TP+  + KL         +++  + K  Y   VG L+Y +    PD
Sbjct: 1069 VLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPD 1128

Query: 121  ISFAVSVVSQFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            I+ AV VVS+F+  P ++H EA+  +LRYL+ T    L F   +   ++ YTD D
Sbjct: 1129 IAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDAD 1182

[Close]

BLAST of Cmc03g0062341 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 46/156 (29.49%), Postives = 89/156 (57.05%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DD+V++  D T+++  K+ +  +F + DL  +K+F+G+ +   ++ I++SQ  Y   +L
Sbjct: 1088 VDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKIL 1147

Query: 61   TETGMLRCLPANTPI--EFNCKLGNSDDQVPIDKEQYQRFVGKLIYLS-HIHPDISFAVS 120
            ++  M  C   +TP+  + N +L NSD+         +  +G L+Y+     PD++ AV+
Sbjct: 1148 SKFNMENCNAVSTPLPSKINYELLNSDEDC---NTPCRSLIGCLMYIMLCTRPDLTTAVN 1207

Query: 121  VVSQFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKK 154
            ++S++      +  + + RVLRYLK T    L+FKK
Sbjct: 1208 ILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKK 1240

[Close]

BLAST of Cmc03g0062341 vs. ExPASy TrEMBL
Match: A0A5A7U2P7 (Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001490 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.2e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSK GIF+SQRKYT DLL
Sbjct: 975  VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKYGIFVSQRKYTLDLL 1034

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1035 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1094

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1095 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1140

[Close]

BLAST of Cmc03g0062341 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.2e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSKEGI +SQRKYT DLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc03g0062341 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.2e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSKEGI +SQRKYT DLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc03g0062341 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.2e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSKEGI +SQRKYT DLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc03g0062341 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.2e-76
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1    MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
            +DDIVL+ DDQT+ISQLKQRMG+EFEIKDLGNLKYFLGMEVARSKEGI +SQRKYT DLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            TETGML C PA+TPIEFNCKLGNSDDQVP+DKEQYQR VGKLIYLSH  PDISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
            QFM+APYEKHMEA+NR+LRYLK TP KGLMF+K NRKTIEAYTD D
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc03g0062341 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 131.7 bits (330), Expect = 5.3e-31
Identity = 62/164 (37.80%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 1   MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
           +DDI++  ++   + +LK ++ + F+++DLG LKYFLG+E+ARS  GI + QRKY  DLL
Sbjct: 284 VDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLL 343

Query: 61  TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
            ETG+L C P++ P++ +           +D + Y+R +G+L+YL     DISFAV+ +S
Sbjct: 344 DETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLS 403

Query: 121 QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTD 165
           QF  AP   H +A+ ++L Y+K T  +GL +       ++ ++D
Sbjct: 404 QFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSD 447

[Close]

BLAST of Cmc03g0062341 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 60/166 (36.14%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 1   MDDIVLSRDDQTKISQLKQRMGNEFEIKDLGNLKYFLGMEVARSKEGIFMSQRKYTFDLL 60
           +DDI+L+    T ++ L  ++ + F +KDLG + YFLG+++     G+F+SQ KY   +L
Sbjct: 7   VDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQIL 66

Query: 61  TETGMLRCLPANTPIEFNCKLGNSDDQVPIDKEQYQRFVGKLIYLSHIHPDISFAVSVVS 120
              GML C P +TP+        S  + P D   ++  VG L YL+   PDIS+AV++V 
Sbjct: 67  NNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVC 126

Query: 121 QFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAYTDLD 167
           Q M  P     + + RVLRY+K T   GL   K ++  ++A+ D D
Sbjct: 127 QRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171

[Close]

BLAST of Cmc03g0062341 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 48.1 bits (113), Expect = 7.8e-06
Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 103 IYLSHIHPDISFAVSVVSQFMRAPYEKHMEAINRVLRYLKTTPSKGLMFKKINRKTIEAY 162
           +YL+   PD++FAV+ +SQF  A     M+A+ +VL Y+K T  +GL +   +   ++A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 163 TDLD 167
            D D
Sbjct: 61  ADSD 64

The following BLAST results are available for this feature:

BLAST of Cmc03g0062341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048527.1	6.7e-76	86.14	transportin-3 isoform X1 [Cucumis melo var. makuwa]	[more]
TYJ99952.1	8.7e-76	86.14	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	8.7e-76	86.14	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	8.7e-76	86.14	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	8.7e-76	86.14	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc03g0062341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.4e-30	39.76	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.9e-28	39.52	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	2.1e-24	36.14	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	7.3e-17	32.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.1e-15	29.49	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc03g0062341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2P7	3.2e-76	86.14	Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3BJK7	4.2e-76	86.14	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	4.2e-76	86.14	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	4.2e-76	86.14	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	4.2e-76	86.14	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]

BLAST of Cmc03g0062341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.3e-31	37.80	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.5e-25	36.14	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	7.8e-06	35.94	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 2..75 e-value: 7.1E-13 score: 48.7
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 23..166
None	No IPR available	PANTHER	PTHR11439:SF335	SUBFAMILY NOT NAMED	coord: 23..166
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0062341.1	Cmc03g0062341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding