Cmc03g0061891 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0061891
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	E3 ubiquitin-protein ligase SDIR1
Location	CMiso1.1chr03: 2121474 .. 2125639 (-)
RNA-Seq Expression	Cmc03g0061891
Synteny	Cmc03g0061891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATTATTAGCAAAGGAAAAAACAGGAGGCGTTAGAATTTGACCAAACCAACGGAATACTACGTCGTTTTTGATCATTCAACTCCTTCCTTTTACCAAAAGCCTGCCATAGTTGGAAGCCAAGCCAAAGACGGGTCTTAAAGCAACTCAACGCGTCCGAGTCACCTCCCTCACTCGACTCGCTCCCTCATCTTCTCCGTCGCCACACCCAAGCCGAGTGTTTTTTTTTTTTTTTTTTTTTTTTCGTTCTTCACATAATTTTAAGAGACCCCATCATCGGAACTTTTCGATTCAAAGCAAACCTTGTCGTTTTTGGACCTACACAGTTAACCCCATTTACTCGATTTTGTTCCGTAAGTCTCCGATTTCCCTTAACAATGATCATTCTTGTTAGATTATTTGCTGATCCCTGTTCTCTTATACCTACTGTTTCTTCGTATTCGGTTTCTGGGGTTCTTTAATTCTGTCTGATTGTTTTTTCACTTGTTTAACTGTCATCGGAGCTTATAGTTATACGGCTGTAGAATTGTTGTGTTGTCTGAATCTGTTCATCGATTGATATTTTCGCTACATTTGATTATCGGTGGGACTTGGCTGTGAATGTCGAAAATTGGGGATTTAGATGAAAATAATTCGAAGCTGATCTGGTACCCAGTAGTTCTGATTTCGAAGTTGACAATTTGCATTTTAGTGGAGACCTCGATCTTTTAGATATTGGGTGTCTGTATGCACTTGGAGTTTGAGTGCATTCATCTTACAGTCCTTTGGTTTCTTTGGATGCCCAAATGCGGGGGAAATGTCTTGTGTACTTCTGGATAGCTTTTCACTTTTCAGACAATGCTGTTCCTTTCCTTGAGGGTTTTCAGGTTTAGATATATTGTTTTTTATGTTGTCTTAAGGAATCAATGAATTTGAGTTATCTAATCTGTATGACGCAGATGATTAGCTCATGAATGAGGCTTAGGCATTGATTTTGACAACTAAGGAATGATTAATTGGGAATTCCATGCTCTTCTTGTTGAATTACACATGTGATGGATGTACCATGTATGAACATGTCAATACTTACAAGAACTTCAAAATCTTTGAAATTATTTATGATTATATTTTTGTTATATAGGTGGTCTATTGTAGCCATGGACATTACATCTACACATTTATATGGTTAAAGGAACGTCAAAGTTTAGGCTATTATGAGTCTTTGATTCTTCAAACTTCACTTCTTATGTTACTTGTTCATTGAATAATCCATCGGGGCTGAGAATGATGAATGATGTGTTATTGTAGTAAGGATATGTGGGTTGTTTGTCCATTAAGATAATGGAGCCTCTTTCTCTACGAGTTCTGCAGATTATTGCTATAAATTCATAAGACTTTCATTCTGTAGGTTCACATTACTCTGAAATCAACTAGCTGTTGCAACTATTGCGGACATGAGTTTTGTCTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTGTCTGGATTTATACCTGAAAGGCGTGCAATGGTATGCTCAATATTTTGTATTATTGACCTGTTAATACCAATGCTTGGAAATTTCCAGATATTGCTCTGGTTATGATTCTAATTTTATTTATTACTTCTTTTTTTTTTGCTCAGCGGGTTCATGCAGCACGTCCTGTTAACTCAAACTCACTTGCCTTTCTTGTCACGGGTACTATTTCACCTATGTGCAGGCTGATATCTGTTTCCTGTGATAATATTGATTTATTGCACTTTTTTTTAAATCCCTGACTTTTGTTGCAGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCAAACTTTCTGGTATGTTTCATATTCCACATTGTGAATAAGTAGTATATTGATCTTACTCTCTCACCCTTGATATGAATCTTTACATTTTCTTGCTTTGAACATGCATATTTAGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCAACTTGTCAGCAACTTCAGGCTCAAGCCCAAGCGAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGTTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTCGACGATCTAGGTATGGTTCAAATTTAATAATGGCAAGTTCGTAGCTTCAAATTTTGTCAAACATGGCCACAATTCTTTTACATTCTCAGTGTATTGCTTTCACCTATTTTTCAGCAACATTTTTCAGTGGCACAAACTCTCTTGTGTGTGTTTGTGTGCATATGTGGGGGTAAATATCCACATCGTGGTAAAATTTGGGGAAACTTTATCAATCGGATTTCTTTGACAAGATTCTGAAATTAATCATTTTGATGTGGGTTTCTGAAAAAGCAAGAAATTCACTTCTTCGGGCAATTTTTCTTTTGTTGATCAGACTTCTTTGGCACGGCTTGACATGATAAGCTTTCAGTAAATGCATGAAGTCAAATAGGATAGAAGCAGTGATTTTTATGAAACTTTAAAACTTGCTGAACTCGTCGTCAAGTGTTGAAAAGAAAGTGTCCTGAACTTGCTTCTGATAGTATGGTTGGGAAGGACAGTACTTCATGAAACTTCAAATTTGTTGGGTTTCTTTTTCTGATTTCTAACTTTTTTTAAACCCCGTCATCATCTCTTTTAAATTTCATATCTATATGTATTGTTGATATGCTATGTTAAACATATCATTAATCTTCAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCAATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGGTAATCAATGTCATATTAGTCTACATTCCAGAATGACTTCTGATGTTTTATTTTAAGAATACATACTCTTTGCTGAGACTTTTCAACGATGAAATATGTCTCCAGCTTGTCACCAAAAACTAAAATTGAGTTTTCATTTTTCATTAAATTATCTGCAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTAATGAGGTACCTAATTAGGTTTTACTTTTTTTCCCTTACATGTTTGATTCTTTTTTTGCCTTAAATGGTGTATACAAAATTTAAAATACAATAATTGCTCGTTTTAGAAGGAAATATAGTTCTTGAAAGAGACAGAAGGCCAAAATTTTCCTGTTTTTTAGCCTTATTATTTGTATACCACACACTCTTCTCATTAGTTATCAATTTTCTGAGTACATACTGATTTTTAATTTTGATTGCAGAAGAGACAAGATTCAGTTAATGCAGTTGGCAGTACCAAGACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGGTTAATCTCCATCTCTATGGCAGTCTCCTTTCCTTCCAAACAAATGGTTACTATTTTTTCATGTTGAGAATTTAGGAATTTGGTTTCTTGTTATTATTACATATAGTGTTTTCGCTTTGTTCGTCTTCTTTTTCTTTTTGTCTTCTTTGGGGGCCTCTGTCCTACAGTTGCATTCCCTTTTCCTTCAAATTTTGATACATCTTCTAACTGCTGGTATTCCAAGAGTTCTTTTAATTTGAATTCAATCTTGTAGTTCCATGCCAACTGCATAGATCCGTGGCTGCGACAGCAGGGAACGTGCCCTGTCTGTAAATTCAGAGCAGTATCCGGATGGTCAGAACAGGGGCAAGGCGAAACCGATGCTTATATGGTTTAGTCCTGGATGCACAGCAAGTTATCAAACAATGCTTGATGCCTTATTAAAAGCAAAGGATATGGGCAGACATGGTGTAATTAGGTTTAGGGTAGGGATTACAGAAATTGGAGTTGCCGTTTTGTATATCTTTGAACTTCTGACGAGCCATTAATTGTATTCTTGAAGTTGATCGTTTGTGATATAGTCTCTGACCATTGTGAGTGAGGAGAATTTTGTTCTTTCACTGTCTTCAATGTATTATTCCAACCCTCTATAGCTAAATACCAAAAAGAAAATCATCTGGCGGTAAAAAAGGGTCTTTTTATTCTCAGCTAATCGGTGAAATTACAAGCAAAATGCTTAGT

mRNA sequence

GAGATTATTAGCAAAGGAAAAAACAGGAGGCGTTAGAATTTGACCAAACCAACGGAATACTACGTCGTTTTTGATCATTCAACTCCTTCCTTTTACCAAAAGCCTGCCATAGTTGGAAGCCAAGCCAAAGACGGGTCTTAAAGCAACTCAACGCGTCCGAGTCACCTCCCTCACTCGACTCGCTCCCTCATCTTCTCCGTCGCCACACCCAAGCCGAGTGTTTTTTTTTTTTTTTTTTTTTTTTCGTTCTTCACATAATTTTAAGAGACCCCATCATCGGAACTTTTCGATTCAAAGCAAACCTTGTCGTTTTTGGACCTACACAGTTAACCCCATTTACTCGATTTTGTTCCGTTCACATTACTCTGAAATCAACTAGCTGTTGCAACTATTGCGGACATGAGTTTTGTCTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTGTCTGGATTTATACCTGAAAGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCAAACTCACTTGCCTTTCTTGTCACGGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCAAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCAACTTGTCAGCAACTTCAGGCTCAAGCCCAAGCGAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGTTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTCGACGATCTAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCAATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTAATGAGAAGAGACAAGATTCAGTTAATGCAGTTGGCAGTACCAAGACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGTTCCATGCCAACTGCATAGATCCGTGGCTGCGACAGCAGGGAACGTGCCCTGTCTGTAAATTCAGAGCAGTATCCGGATGGTCAGAACAGGGGCAAGGCGAAACCGATGCTTATATGGTTTAGTCCTGGATGCACAGCAAGTTATCAAACAATGCTTGATGCCTTATTAAAAGCAAAGGATATGGGCAGACATGGTGTAATTAGGTTTAGGGTAGGGATTACAGAAATTGGAGTTGCCGTTTTGTATATCTTTGAACTTCTGACGAGCCATTAATTGTATTCTTGAAGTTGATCGTTTGTGATATAGTCTCTGACCATTGTGAGTGAGGAGAATTTTGTTCTTTCACTGTCTTCAATGTATTATTCCAACCCTCTATAGCTAAATACCAAAAAGAAAATCATCTGGCGGTAAAAAAGGGTCTTTTTATTCTCAGCTAATCGGTGAAATTACAAGCAAAATGCTTAGT

Coding sequence (CDS)

ATGAGTTTTGTCTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTGTCTGGATTTATACCTGAAAGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCAAACTCACTTGCCTTTCTTGTCACGGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCAAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCAACTTGTCAGCAACTTCAGGCTCAAGCCCAAGCGAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGTTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTCGACGATCTAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCAATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTAATGAGAAGAGACAAGATTCAGTTAATGCAGTTGGCAGTACCAAGACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGTTCCATGCCAACTGCATAGATCCGTGGCTGCGACAGCAGGGAACGTGCCCTGTCTGTAAATTCAGAGCAGTATCCGGATGGTCAGAACAGGGGCAAGGCGAAACCGATGCTTATATGGTTTAG

Protein sequence

MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV

Homology

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BLAST of Cmc03g0061891 vs. NCBI nr
Match: XP_008441380.1 (PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo] >ADN34069.1 protein binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 536.6 bits (1381), Expect = 1.3e-148
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

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BLAST of Cmc03g0061891 vs. NCBI nr
Match: XP_038885371.1 (E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885372.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885373.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885374.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida])

HSP 1 Score: 530.4 bits (1365), Expect = 9.2e-147
Identity = 272/275 (98.91%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKV GPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVPGPQSDP 180

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQD VNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDLVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

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BLAST of Cmc03g0061891 vs. NCBI nr
Match: XP_004138475.1 (E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus] >XP_011656385.1 E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus] >XP_031743514.1 E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 273/275 (99.27%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSES EKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQ QGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 275

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BLAST of Cmc03g0061891 vs. NCBI nr
Match: KGN45732.1 (hypothetical protein Csa_005578 [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 273/275 (99.27%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSES EKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQ QGETDAYMV
Sbjct: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 400

[Close]

BLAST of Cmc03g0061891 vs. NCBI nr
Match: XP_023551037.1 (E3 ubiquitin-protein ligase SDIR1 [Cucurbita pepo subsp. pepo] >XP_023551039.1 E3 ubiquitin-protein ligase SDIR1 [Cucurbita pepo subsp. pepo] >XP_023551040.1 E3 ubiquitin-protein ligase SDIR1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146
Identity = 270/275 (98.18%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQDS NAVGSTKTSEDELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAY V
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV 275

[Close]

BLAST of Cmc03g0061891 vs. ExPASy Swiss-Prot
Match: Q9M2S6 (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 6.2e-114
Identity = 220/273 (80.59%), Postives = 238/273 (87.18%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLS-GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMS 60
           MSFVFRG+R  D+E+G S GF+PERRAMRVH ARPVNSNSLAFLVTVLLLFMILNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 120
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRLH+PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 180
           GRLQGLRLQLALLDREFDDLDYETLRALDSDN  TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 181 SSVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHAN 240
            S+ +QAS+S S EK  DS N   S K +EDELTCSVCLEQV VGE++R+LPCLHQFHA 
Sbjct: 181 CSLAKQASTSSSAEKMLDSANE--SKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 241 CIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA 273
           CIDPWLRQQGTCPVCKFRA SGW EQ + + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

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BLAST of Cmc03g0061891 vs. ExPASy Swiss-Prot
Match: Q10R93 (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0167500 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.6e-11
Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 205 TKTSEDELT---CSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGT-CPVCKFRAVS 264
           TK  ED  T   C++CLE  NVGE +R LPC H+FHA C+D WL    T CPVCK  A +
Sbjct: 224 TKVQEDNCTSSMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPVCKRDAST 283

Query: 265 GWSEQGQGET 271
           G  +    ET
Sbjct: 284 GIPDPPASET 293

[Close]

BLAST of Cmc03g0061891 vs. ExPASy Swiss-Prot
Match: Q68DV7 (E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.9e-11
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 185 QASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPW 244
           QAS  ++  +  DS ++  S         C++CLE+ + G+ +R + CLH+FH NC+DPW
Sbjct: 249 QASCRQARGEWPDSGSSCSSAP------VCAICLEEFSEGQELRVISCLHEFHRNCVDPW 308

Query: 245 LRQQGTCPVCKFRAVSGWS-EQGQGETDAY 274
           L Q  TCP+C F    G S  Q  G + +Y
Sbjct: 309 LHQHRTCPLCMFNITEGDSFSQSLGPSRSY 332

[Close]

BLAST of Cmc03g0061891 vs. ExPASy Swiss-Prot
Match: P0DPR2 (E3 ubiquitin-protein ligase RNF43 OS=Xenopus tropicalis OX=8364 GN=rnf43 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.9e-11
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 202 VGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKF 257
           V +  TS     C++CLE+   G+ +R LPC H++H  C+DPWLRQ  TCP+C +
Sbjct: 256 VETASTSSSVPVCAICLEEFTDGQELRILPCCHEYHLGCVDPWLRQNHTCPLCMY 310

[Close]

BLAST of Cmc03g0061891 vs. ExPASy Swiss-Prot
Match: Q8NC42 (E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens OX=9606 GN=RNF149 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 210 DELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK---FRAVSGWSEQG 267
           D   C+VC+E   V ++IR LPC H FH  CIDPWL    TCP+CK    +A+  W E G
Sbjct: 265 DAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPG 324

[Close]

BLAST of Cmc03g0061891 vs. ExPASy TrEMBL
Match: E5GC70 (Protein binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.2e-149
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Cmc03g0061891 vs. ExPASy TrEMBL
Match: A0A1S3B3A3 (E3 ubiquitin-protein ligase SDIR1 OS=Cucumis melo OX=3656 GN=LOC103485511 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.2e-149
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Cmc03g0061891 vs. ExPASy TrEMBL
Match: A0A0A0KBF9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008630 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.8e-147
Identity = 273/275 (99.27%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSES EKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQ QGETDAYMV
Sbjct: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 400

[Close]

BLAST of Cmc03g0061891 vs. ExPASy TrEMBL
Match: A0A6J1FER7 (E3 ubiquitin-protein ligase SDIR1 OS=Cucurbita moschata OX=3662 GN=LOC111444825 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.8e-146
Identity = 269/275 (97.82%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQDS NAVGSTK SEDELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSANAVGSTKASEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAY V
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV 275

[Close]

BLAST of Cmc03g0061891 vs. ExPASy TrEMBL
Match: A0A6J1JZS1 (E3 ubiquitin-protein ligase SDIR1-like OS=Cucurbita maxima OX=3661 GN=LOC111488912 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.2e-145
Identity = 267/275 (97.09%), Postives = 270/275 (98.18%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSL FLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLVFLVTVLLLFMMLNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQDS NAVGSTK SEDELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSANAVGSTKASEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 276
           IDPWL+QQGTCPVCKFRAVSGWSEQGQGETDAY V
Sbjct: 241 IDPWLQQQGTCPVCKFRAVSGWSEQGQGETDAYSV 275

[Close]

BLAST of Cmc03g0061891 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 411.8 bits (1057), Expect = 4.4e-115
Identity = 220/273 (80.59%), Postives = 238/273 (87.18%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLS-GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMS 60
           MSFVFRG+R  D+E+G S GF+PERRAMRVH ARPVNSNSLAFLVTVLLLFMILNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 120
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRLH+PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 180
           GRLQGLRLQLALLDREFDDLDYETLRALDSDN  TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 181 SSVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHAN 240
            S+ +QAS+S S EK  DS N   S K +EDELTCSVCLEQV VGE++R+LPCLHQFHA 
Sbjct: 181 CSLAKQASTSSSAEKMLDSANE--SKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 241 CIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA 273
           CIDPWLRQQGTCPVCKFRA SGW EQ + + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

[Close]

BLAST of Cmc03g0061891 vs. TAIR 10
Match: AT1G04790.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.9e-13
Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 132 LDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSES 191
           +DR+F + DYE L ALD +N                 H++   G  S + +N    S+  
Sbjct: 542 MDRDFTEDDYELLLALDENN-----------------HRH---GGASANRINNLPESTVQ 601

Query: 192 NEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTC 251
            +  Q+               TC +CLE   +G+ IR LPCLH+FH +CIDPWL +  +C
Sbjct: 602 TDNFQE---------------TCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSC 630

Query: 252 PVCK 256
           PVCK
Sbjct: 662 PVCK 630

[Close]

BLAST of Cmc03g0061891 vs. TAIR 10
Match: AT5G66070.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 197 DSVNAVGS---TKTSEDELTCSVCLEQVNVGELIRSLP-CLHQFHANCIDPWLRQQGTCP 256
           DS+N +     T TS + ++CSVCL+   VGE +RSLP C H FH  CID WLR+  +CP
Sbjct: 156 DSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCP 215

[Close]

BLAST of Cmc03g0061891 vs. TAIR 10
Match: AT5G66070.2 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 197 DSVNAVGS---TKTSEDELTCSVCLEQVNVGELIRSLP-CLHQFHANCIDPWLRQQGTCP 256
           DS+N +     T TS + ++CSVCL+   VGE +RSLP C H FH  CID WLR+  +CP
Sbjct: 180 DSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCP 239

[Close]

BLAST of Cmc03g0061891 vs. TAIR 10
Match: AT1G80400.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.1e-11
Identity = 36/109 (33.03%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 150 DNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSESNEKRQDSVNAVGSTK--- 209
           +N   T   + E INALPV+++K          ++  +  E +E+ +     +GS K   
Sbjct: 298 ENFSQTRGATAEAINALPVYRFK----------SKSRNDLEFSEEGEGGFLLLGSQKKRL 357

Query: 210 TSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 256
            S ++ +C +CL +    E +R LPC H FH +C+D WL+   TCP+CK
Sbjct: 358 ISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396

The following BLAST results are available for this feature:

BLAST of Cmc03g0061891 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441380.1	1.3e-148	100.00	PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo] >ADN34069.1 protein ...	[more]
XP_038885371.1	9.2e-147	98.91	E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885372.1...	[more]
XP_004138475.1	1.2e-146	99.27	E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus] >XP_011656385.1 E3 ubiquitin...	[more]
KGN45732.1	1.2e-146	99.27	hypothetical protein Csa_005578 [Cucumis sativus]	[more]
XP_023551037.1	2.0e-146	98.18	E3 ubiquitin-protein ligase SDIR1 [Cucurbita pepo subsp. pepo] >XP_023551039.1 E...	[more]

BLAST of Cmc03g0061891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2S6	6.2e-114	80.59	E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 ...	[more]
Q10R93	7.6e-11	50.00	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
Q68DV7	9.9e-11	37.78	E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1	[more]
P0DPR2	9.9e-11	45.45	E3 ubiquitin-protein ligase RNF43 OS=Xenopus tropicalis OX=8364 GN=rnf43 PE=2 SV...	[more]
Q8NC42	1.7e-10	48.33	E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens OX=9606 GN=RNF149 PE=2 SV=2	[more]

BLAST of Cmc03g0061891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GC70	6.2e-149	100.00	Protein binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B3A3	6.2e-149	100.00	E3 ubiquitin-protein ligase SDIR1 OS=Cucumis melo OX=3656 GN=LOC103485511 PE=4 S...	[more]
A0A0A0KBF9	5.8e-147	99.27	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008630 P...	[more]
A0A6J1FER7	3.8e-146	97.82	E3 ubiquitin-protein ligase SDIR1 OS=Cucurbita moschata OX=3662 GN=LOC111444825 ...	[more]
A0A6J1JZS1	3.2e-145	97.09	E3 ubiquitin-protein ligase SDIR1-like OS=Cucurbita maxima OX=3661 GN=LOC1114889...	[more]

BLAST of Cmc03g0061891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55530.1	4.4e-115	80.59	RING/U-box superfamily protein	[more]
AT1G04790.1	4.9e-13	34.68	RING/U-box superfamily protein	[more]
AT5G66070.1	1.6e-11	49.21	RING/U-box superfamily protein	[more]
AT5G66070.2	1.6e-11	49.21	RING/U-box superfamily protein	[more]
AT1G80400.1	2.1e-11	33.03	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 214..254 e-value: 1.7E-8 score: 44.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 213..255 e-value: 3.0E-12 score: 46.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 214..255 score: 12.282736
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 175..259 e-value: 5.2E-20 score: 72.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..205
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 1..274
None	No IPR available	PANTHER	PTHR45977:SF4	E3 UBIQUITIN-PROTEIN LIGASE SDIR1	coord: 1..274
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 213..255 e-value: 2.11363E-24 score: 90.4389
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 208..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0061891.1	Cmc03g0061891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane