Cmc03g0060881 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0060881
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein FAM204A like
Location	CMiso1.1chr03: 1210500 .. 1213664 (-)
RNA-Seq Expression	Cmc03g0060881
Synteny	Cmc03g0060881

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCATTTTTCCAATAAAGTATTGCAAACACAAAGGAAGTAGAGATTTTGAAGATGTGGAAAGACATAAATGAATTGGTGAAAAGGTGAAGAGAAGGCAGTGGAGAAATTTGTGAAGTGAAGGCAGTGAGGAAATTTGTAAAGGCAACGGAAAAATTTGGGGAGTGAAAATGTTGAAAGTGTGAAGTGACAAAATCAGAGGCCCGAAATTAGTGAAGTTGTGAAGTGAAAAAATATTGTGAAGTTATGAAATGAAAGAATGTGTTGTTGAATAGAAGATGGGAGACTCGACCCTCTTCCATGAAAAGACCGCAGGTACTGTGTGATATTCGTTGGCGTGAATTAATTTAAATTTGGAGGTAGCTGCAGGTGGCGTCGGAATCTTGTTGACCCACACACTCAGGCGTATGTAAATTTTTTTTTCCCGATTTAGTTACGGAAAACTCGCCCTAGTATCCTTTATGAAAAATAAATTTCTTTAACCAAAGTATTTAAATAGGAATTTGAAATCCGAAGAAGGTGAGCTAATTAAACTGTGGCGAAAATGGAGGACGGTGAAGAATATGAGTCCAGAGGCTTGGCAAACACATCATCCTCATCTCTGCAACCAAATTTCAAACCTAAAAGAGTCACCAAGGAGCAGCTCTCAAAATTTCAGGTACTCTTTTTCCTTGATTTACATTCGAATTAGGGTTTATGGTTTAGTTCAATATCGTCATTCTCTATAATGCTTCTTATCTAACATCAAGACGGCAAGGAAAAGCAAGTAACTTCTTGGTTGTGAAATTGTGAAGGGTGTTTCTATATCAAATCAATGTGGTGGCTAACACCCTGATTGGTAACTTTGTGGTTTATAGTTTTTGGTTTTTGAAACTTAAACTCATAAACACCGTTTCAACCTTGAGGGCTTTTTGTTTAGTTATCTACTCTCTTTTCAAAAACTATGTTAAGTTTTAAAATAGTTCTTCAAATTTTGTTTTCGATTAACATCATAGACCTTGATAAAAGACAAGGTTGTTTACAGGTGATCACCTAATAAGATTTAATATCCTACTAGTTTCTTTGACATTCAAAGGTCGCAGGTAAGGTGAAGTTAAGCTGGCTCTACAACCCACTGATATTAAAAAGAAGGTTTTTGTTTTTTAAATTTGGCTAAGAACTTTACTTTTTTACCTGTAGAAAATTGAGAGGAAATAAGCAGCATTTTCTAAAACCAAAAACAAAAAACAAGAGAGTTTTCAAATGGAATCCAAGTTTATTGTTGAATAGAAACGGTAGCTTTCACTTTCTTAGCACCAGTTGAATGGATACGTTCTTCGGTTCTCTGCAGCATATGCTTAGCCAATTTTTCTGATTACTTATGGTTTGGTTAATTTTATATGTTTGTCCCTCAATATACTTTCTCTCTATCGTTATCATTTTTCTTTATACTATCAATTTATGACAGGAGCTTCAAAGGAGACGACTTCAGATTAAATCAAGGTCAAAGATAAGAAAGAATACAAAAGGTTTTTCCAGTTCTTTGTATTGGGGTGTAGTTTCTTGTGAAAAGGTTGTGTTTTAATTTTGAAGTTTTTATTGGAAATATAGATGCGACTGGAAAATCTCAAATCAAACATCTGAACACCAGTAATGAAGTTAATGAAACTGAACACTCGAGACTTTCCAATTCTGATGTTGATTTTGGGGAAAAGAGCTCCCTTGTTCAGGATGACAAGACCAAAACTACGCTTTCATCCAAAAAGCTACACAAATTACATTGGGGGTATGAGATATTATAGTACATTCTATATAACATACACACACATGTCTGTAGTATTTAAGACACTCCAAACTAATGGGAAGCCACAGCCATGGCTTGTTTCAAAGAGCATATCTATGAAACACTATCAACCTATAACAATTAATCTTAATGTGGGTGGATTTATTTAGGTAGATCTCGAAAGAGTTACAAGAATGGACTAAACCTATTGGTCAAGAATCAAGAGTGGTATTATTTGTAGTATTCAAGGATTCCCGTAGTATTATGATCCAAGTTTATTTTGTTTCCAAAGGGTCAGTCATTTTTTAATATGCTGTATTTCCAGTTTTGAAAAACATTGTAAACATAGAAAGATCATTTATATTTATAAATACTGCAAGCATGAACGGACCATTCCTATCTCTGATCGAAGTAAAAATTTCAACATAAGATTTATTATTTGGATTGTAATTTATTAGCCACTCATTTGTCCAATAAGCCAGGTAATTAAGTGCTGTTACTTGGGAATCCCCAATCGATAAAACTTAATTATTGCGGATAAAGAAGATAAAAAAGAACAAGAACAACCGAAGAGCCAGGGTAGAGGGCAGGGCACCCCCCAAAAAAGAGAACTATACCATAAGAGTCTTTTCACCATGAGCTCTTTTGTATTTACTTAACTTGAGGGATTTTTTCTTTATCTCCCTTGTTGTTTGTGTCCTCTCAGCCTGTTGATGAAGTTTTAGATACTTTTTCTTACTAGAAGAGAACAAAAAATTGGGGACTTCGGATGGGAAAATACAAATTAGACATCACCCCATCTGTTGTCTTATATATCTTCTATAAATTTGTCAATGGTCTTATTTATATGTCAGGCTTGACACCAAGGAACCATGGGAAAGGAAGGCAAACATGTAAAGATACATATATATAGGTGGGATGCAGCTGCCAAATGCTGTTGAGTGGGATTGGGATTTGGAAATTGAATGATACAACTCGAAAGGTTTGTATTATGGGTGATGGATCATAATGTGTTGAATGACTTATTGACTCGGTTTTATACTTATTATCTGCTCATACTGATCTTACAGACCCGAATTATGTGGAAACTTACTCGGTGTTGATGGTGAAGAATGGATTAAAGATAGGGAAGCTGTTGCAAATTCTTGAGAATTGCCTCTAGGTTTGATGTCTTTGCCTTCTGCGTTGGCATAAAACTATTAGAGAACCAATTTTTTACAAGGTCGTATTATAAGTTTAACCTTCAAGTTTAATGATTATGGGTGTGATTTTATGTTGCTTTTGCTGTTAAAACTGTTAACTAAATCATCAGCATGACCTGTTTAATTGACAAATATTGGTTATTTGGCATACCGTGATAGATAAATGGCAAATGAAAGTGAGTAACTGGTTATTATTTCTTTCA

mRNA sequence

GTCATTTTTCCAATAAAGTATTGCAAACACAAAGGAAGTAGAGATTTTGAAGATGTGGAAAGACATAAATGAATTGGTGAAAAGGTGAAGAGAAGGCAGTGGAGAAATTTGTGAAGTGAAGGCAGTGAGGAAATTTGTAAAGGCAACGGAAAAATTTGGGGAGTGAAAATGTTGAAAGTGTGAAGTGACAAAATCAGAGGCCCGAAATTAGTGAAGTTGTGAAGTGAAAAAATATTGTGAAGTTATGAAATGAAAGAATGTGTTGTTGAATAGAAGATGGGAGACTCGACCCTCTTCCATGAAAAGACCGCAGGTACTGTGTGATATTCGTTGGCGTGAATTAATTTAAATTTGGAGGTAGCTGCAGGTGGCGTCGGAATCTTGTTGACCCACACACTCAGGCGTATGAATTTGAAATCCGAAGAAGGTGAGCTAATTAAACTGTGGCGAAAATGGAGGACGGTGAAGAATATGAGTCCAGAGGCTTGGCAAACACATCATCCTCATCTCTGCAACCAAATTTCAAACCTAAAAGAGTCACCAAGGAGCAGCTCTCAAAATTTCAGGAGCTTCAAAGGAGACGACTTCAGATTAAATCAAGGTCAAAGATAAGAAAGAATACAAAAGGCTTGACACCAAGGAACCATGGGAAAGGAAGGCAAACATGTAAAGATACATATATATAGGTGGGATGCAGCTGCCAAATGCTGTTGAGTGGGATTGGGATTTGGAAATTGAATGATACAACTCGAAAGACCCGAATTATGTGGAAACTTACTCGGTGTTGATGGTGAAGAATGGATTAAAGATAGGGAAGCTGTTGCAAATTCTTGAGAATTGCCTCTAGGTTTGATGTCTTTGCCTTCTGCGTTGGCATAAAACTATTAGAGAACCAATTTTTTACAAGGTCGTATTATAAGTTTAACCTTCAAGTTTAATGATTATGGGTGTGATTTTATGTTGCTTTTGCTGTTAAAACTGTTAACTAAATCATCAGCATGACCTGTTTAATTGACAAATATTGGTTATTTGGCATACCGTGATAGATAAATGGCAAATGAAAGTGAGTAACTGGTTATTATTTCTTTCA

Coding sequence (CDS)

ATGGAGGACGGTGAAGAATATGAGTCCAGAGGCTTGGCAAACACATCATCCTCATCTCTGCAACCAAATTTCAAACCTAAAAGAGTCACCAAGGAGCAGCTCTCAAAATTTCAGGAGCTTCAAAGGAGACGACTTCAGATTAAATCAAGGTCAAAGATAAGAAAGAATACAAAAGGCTTGACACCAAGGAACCATGGGAAAGGAAGGCAAACATGTAAAGATACATATATATAG

Protein sequence

MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGLTPRNHGKGRQTCKDTYI

Homology

[Close]

BLAST of Cmc03g0060881 vs. NCBI nr
Match: TYK06677.1 (uncharacterized protein E5676_scaffold453G001700 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 7.0e-20
Identity = 60/74 (81.08%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGL 60
          MEDGEEYESRGLAN SSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTK  
Sbjct: 1  MEDGEEYESRGLANASSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKDA 60

Query: 61 TPRNHGKGRQTCKD 75
          T ++  K   T  +
Sbjct: 61 TGKSQIKHLNTSNE 74

[Close]

BLAST of Cmc03g0060881 vs. NCBI nr
Match: XP_008441256.1 (PREDICTED: uncharacterized protein LOC103485441 [Cucumis melo] >XP_008441257.1 PREDICTED: uncharacterized protein LOC103485441 [Cucumis melo])

HSP 1 Score: 107.1 bits (266), Expect = 7.0e-20
Identity = 60/74 (81.08%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGL 60
          MEDGEEYESRGLAN SSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTK  
Sbjct: 1  MEDGEEYESRGLANASSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKDA 60

Query: 61 TPRNHGKGRQTCKD 75
          T ++  K   T  +
Sbjct: 61 TGKSQIKHLNTSNE 74

[Close]

BLAST of Cmc03g0060881 vs. NCBI nr
Match: XP_011649922.1 (uncharacterized protein LOC101215509 isoform X2 [Cucumis sativus] >XP_011649923.1 uncharacterized protein LOC101215509 isoform X2 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 1.6e-16
Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGL 60
          MEDGEE ESRGL N SSSSLQPN KP RVTKEQ SKFQELQRRRLQIKSRSKIRKNTKG 
Sbjct: 1  MEDGEEDESRGLENASSSSLQPNSKPNRVTKEQFSKFQELQRRRLQIKSRSKIRKNTKGF 60

Query: 61 T 62
          +
Sbjct: 61 S 61

[Close]

BLAST of Cmc03g0060881 vs. NCBI nr
Match: XP_004138636.1 (uncharacterized protein LOC101215509 isoform X3 [Cucumis sativus] >KGN63130.1 hypothetical protein Csa_022140 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 6.2e-16
Identity = 53/64 (82.81%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 1  MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGL 60
          MEDGEE ESRGL N SSSSLQPN KP RVTKEQ SKFQELQRRRLQIKSRSKIRKNTK  
Sbjct: 1  MEDGEEDESRGLENASSSSLQPNSKPNRVTKEQFSKFQELQRRRLQIKSRSKIRKNTKDA 60

Query: 61 TPRN 65
          T ++
Sbjct: 61 TGKS 64

[Close]

BLAST of Cmc03g0060881 vs. NCBI nr
Match: XP_038884371.1 (uncharacterized protein LOC120075231 isoform X2 [Benincasa hispida])

HSP 1 Score: 89.4 bits (220), Expect = 1.5e-14
Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 1  MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTK 59
          MEDGEE E RGLA+ S+ SLQPNFKPKRVT EQLSKFQELQRRRLQIKSRSK RKNTK
Sbjct: 1  MEDGEEDELRGLASASAPSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKKRKNTK 58

[Close]

BLAST of Cmc03g0060881 vs. ExPASy TrEMBL
Match: A0A1S3B3S6 (uncharacterized protein LOC103485441 OS=Cucumis melo OX=3656 GN=LOC103485441 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-20
Identity = 60/74 (81.08%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGL 60
          MEDGEEYESRGLAN SSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTK  
Sbjct: 1  MEDGEEYESRGLANASSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKDA 60

Query: 61 TPRNHGKGRQTCKD 75
          T ++  K   T  +
Sbjct: 61 TGKSQIKHLNTSNE 74

[Close]

BLAST of Cmc03g0060881 vs. ExPASy TrEMBL
Match: A0A5D3C4A2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001700 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-20
Identity = 60/74 (81.08%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGL 60
          MEDGEEYESRGLAN SSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTK  
Sbjct: 1  MEDGEEYESRGLANASSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKDA 60

Query: 61 TPRNHGKGRQTCKD 75
          T ++  K   T  +
Sbjct: 61 TGKSQIKHLNTSNE 74

[Close]

BLAST of Cmc03g0060881 vs. ExPASy TrEMBL
Match: A0A0A0LMI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404820 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-16
Identity = 53/64 (82.81%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 1  MEDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGL 60
          MEDGEE ESRGL N SSSSLQPN KP RVTKEQ SKFQELQRRRLQIKSRSKIRKNTK  
Sbjct: 1  MEDGEEDESRGLENASSSSLQPNSKPNRVTKEQFSKFQELQRRRLQIKSRSKIRKNTKDA 60

Query: 61 TPRN 65
          T ++
Sbjct: 61 TGKS 64

[Close]

BLAST of Cmc03g0060881 vs. ExPASy TrEMBL
Match: A0A6J1HF11 (uncharacterized protein LOC111462444 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462444 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.3e-10
Identity = 47/69 (68.12%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 5  EEYESRGLANTSSSSLQPNF--KPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGLTP 64
          EE E R     S+ SLQPNF  KPK VT EQLSKFQEL RRRLQIKSRSKIRKNTKGLT 
Sbjct: 4  EEGERRAPEIASTPSLQPNFRPKPKGVTHEQLSKFQELHRRRLQIKSRSKIRKNTKGLTG 63

Query: 65 RNHGKGRQT 72
          ++  K   T
Sbjct: 64 KSQIKDLNT 72

[Close]

BLAST of Cmc03g0060881 vs. ExPASy TrEMBL
Match: A0A6J5WPP9 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS17999 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 2  EDGEEYESRGLANTSSSSLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGLT 61
          E  +E E +  A  S+  LQPN+KP+R+T++QLSKFQEL RRRLQIKS SKI K  KG T
Sbjct: 4  EPDKEDERKEAAIASTPCLQPNYKPRRITQDQLSKFQELHRRRLQIKSTSKIEKKPKGGT 63

Query: 62 PRNHGKG 69
           ++HGKG
Sbjct: 64 GKSHGKG 70

[Close]

BLAST of Cmc03g0060881 vs. TAIR 10
Match: AT5G16160.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 2.6e-04
Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 3  DGEEYESRGLANTSSS-SLQPNFKPKRVTKEQLSKFQELQRRRLQIKSRSKIRKNTKGLT 62
          D E  E+R  A  +S+ SLQPNF    +T++Q+SK QEL +RR+QIK+ +KI K     +
Sbjct: 11 DREAEENRKEALLASTLSLQPNFNRSNLTQKQISKLQELHKRRMQIKANAKIHKKKPKAS 70

Query: 63 PRNHGK 68
            +  K
Sbjct: 71 KNSQSK 76

The following BLAST results are available for this feature:

BLAST of Cmc03g0060881 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06677.1	7.0e-20	81.08	uncharacterized protein E5676_scaffold453G001700 [Cucumis melo var. makuwa]	[more]
XP_008441256.1	7.0e-20	81.08	PREDICTED: uncharacterized protein LOC103485441 [Cucumis melo] >XP_008441257.1 P...	[more]
XP_011649922.1	1.6e-16	86.89	uncharacterized protein LOC101215509 isoform X2 [Cucumis sativus] >XP_011649923....	[more]
XP_004138636.1	6.2e-16	82.81	uncharacterized protein LOC101215509 isoform X3 [Cucumis sativus] >KGN63130.1 hy...	[more]
XP_038884371.1	1.5e-14	86.21	uncharacterized protein LOC120075231 isoform X2 [Benincasa hispida]	[more]

BLAST of Cmc03g0060881 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc03g0060881 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3S6	3.4e-20	81.08	uncharacterized protein LOC103485441 OS=Cucumis melo OX=3656 GN=LOC103485441 PE=...	[more]
A0A5D3C4A2	3.4e-20	81.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LMI7	3.0e-16	82.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404820 PE=4 SV=1	[more]
A0A6J1HF11	9.3e-10	68.12	uncharacterized protein LOC111462444 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J5WPP9	1.6e-09	59.70	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS17999 PE=...	[more]

BLAST of Cmc03g0060881 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16160.1	2.6e-04	42.42	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..28

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0060881.1	Cmc03g0060881.1	mRNA