Cmc03g0060651 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0060651
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein ALP1-like
Location	CMiso1.1chr03: 889698 .. 890245 (-)
RNA-Seq Expression	Cmc03g0060651
Synteny	Cmc03g0060651

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGTTTGTTCATTTGATATGTTCACGTATATCATGTCTGGTTGGGAAGGATCAGCCAATGATTCTCGTATACTTCAAGAATGTATCAAGAATCCTGAGAATAAATTTCCTATGCCTAAGAGAGGTAAATAATTATGTGTTTTTCAGAACTTTAATTCCATATTTGACTTTATGATAATTTTTTATTTACTTTATTATATGCAGATCAATACTATCTTGTCGACTCAGGATATTCAAATATGTCAGGATTTTTAGCACCATTTCGAGGTCAAAGATATCATTTACGAGATTTTAGAGAAAGGAGACATCGCCCTCGAGGTAGAGAAGAAGTGTTTGATTATCGACATTCTTCACTGCGAAATGTCATCAAACATTGTTTTGGTGTGTTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCTTATCCGATCAAGACACAAAGATATATACCGATAACATGTTGCACAATTCATAATTATATTAGATTGAATGATCGTAAGATGATCTTTTCAATGACTTTAGCAATGATTAATGATCTTTGA

mRNA sequence

ATGTGTGTTTGTTCATTTGATATGTTCACGTATATCATGTCTGGTTGGGAAGGATCAGCCAATGATTCTCGTATACTTCAAGAATGTATCAAGAATCCTGAGAATAAATTTCCTATGCCTAAGAGAGATCAATACTATCTTGTCGACTCAGGATATTCAAATATGTCAGGATTTTTAGCACCATTTCGAGGTCAAAGATATCATTTACGAGATTTTAGAGAAAGGAGACATCGCCCTCGAGGTAGAGAAGAAGTGTTTGATTATCGACATTCTTCACTGCGAAATGTCATCAAACATTGTTTTGGTGTGTTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCTTATCCGATCAAGACACAAAGATATATACCGATAACATGTTGCACAATTCATAATTATATTAGATTGAATGATCGTAAGATGATCTTTTCAATGACTTTAGCAATGATTAATGATCTTTGA

Coding sequence (CDS)

ATGTGTGTTTGTTCATTTGATATGTTCACGTATATCATGTCTGGTTGGGAAGGATCAGCCAATGATTCTCGTATACTTCAAGAATGTATCAAGAATCCTGAGAATAAATTTCCTATGCCTAAGAGAGATCAATACTATCTTGTCGACTCAGGATATTCAAATATGTCAGGATTTTTAGCACCATTTCGAGGTCAAAGATATCATTTACGAGATTTTAGAGAAAGGAGACATCGCCCTCGAGGTAGAGAAGAAGTGTTTGATTATCGACATTCTTCACTGCGAAATGTCATCAAACATTGTTTTGGTGTGTTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCTTATCCGATCAAGACACAAAGATATATACCGATAACATGTTGCACAATTCATAATTATATTAGATTGAATGATCGTAAGATGATCTTTTCAATGACTTTAGCAATGATTAATGATCTTTGA

Protein sequence

MCVCSFDMFTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFLAPFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPIKTQRYIPITCCTIHNYIRLNDRKMIFSMTLAMINDL

Homology

[Close]

BLAST of Cmc03g0060651 vs. NCBI nr
Match: TYK06269.1 (protein ALP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 289.3 bits (739), Expect = 2.0e-74
Identity = 137/159 (86.16%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+MSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLV+SGYSNM GFL
Sbjct: 108 MCVCSFDMLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVNSGYSNMPGFL 167

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           APFRGQRYHLRDFRERRHRPRGREEVF+YRHSSLRNVI+ CFGVLKARFPILKQMPPYPI
Sbjct: 168 APFRGQRYHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPI 227

Query: 121 KTQRYIPITCCTIHNYIRLNDRK----MIFSMTLAMIND 155
           KTQ+YIPITCCT+HNYIRLNDR+      FS  L ++ D
Sbjct: 228 KTQKYIPITCCTVHNYIRLNDRQDDLFNYFSNELMIVED 266

[Close]

BLAST of Cmc03g0060651 vs. NCBI nr
Match: TYK21096.1 (protein ALP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 287.7 bits (735), Expect = 5.8e-74
Identity = 133/143 (93.01%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+MSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNM GFL
Sbjct: 54  MCVCSFDMLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMPGFL 113

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           APFRGQRYHLRDFRERRHRPRGREEVF+YRHSSLRNVI+ CFGVLKARFPILKQMPPYPI
Sbjct: 114 APFRGQRYHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPI 173

Query: 121 KTQRYIPITCCTIHNYIRLNDRK 143
           KTQ+YI ITCCT+HNYIRLNDR+
Sbjct: 174 KTQKYILITCCTVHNYIRLNDRQ 196

[Close]

BLAST of Cmc03g0060651 vs. NCBI nr
Match: KAA0068176.1 (putative nuclease HARBI1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 287.7 bits (735), Expect = 5.8e-74
Identity = 133/143 (93.01%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+MSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNM GFL
Sbjct: 54  MCVCSFDMLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMPGFL 113

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           APFRGQRYHLRDFRERRHRPRGREEVF+YRHSSLRNVI+ CFGVLKARFPILKQMPPYPI
Sbjct: 114 APFRGQRYHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPI 173

Query: 121 KTQRYIPITCCTIHNYIRLNDRK 143
           KTQ+YI ITCCT+HNYIRLNDR+
Sbjct: 174 KTQKYILITCCTVHNYIRLNDRQ 196

[Close]

BLAST of Cmc03g0060651 vs. NCBI nr
Match: XP_016901856.1 (PREDICTED: uncharacterized protein LOC103496041 [Cucumis melo])

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-66
Identity = 127/160 (79.38%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+MSGWEGS ND RIL+ECI+NPENKFPMPKRDQYYLVDSGYSNM  FL
Sbjct: 54  MCVCSFDMLFTYVMSGWEGSTNDFRILEECIENPENKFPMPKRDQYYLVDSGYSNMPRFL 113

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           APF+G+RYHLRDFRERRH PRGR EVF+YRHSSLRNVI+ CFGVLKARFPILKQMPPYPI
Sbjct: 114 APFQGRRYHLRDFRERRHCPRGR-EVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPI 173

Query: 121 KTQRYIPITCCTIHNYIRLNDRK----MIFSMTLAMINDL 156
           KT +YI I CCTIHNYIRLNDR+      FS  L ++ D+
Sbjct: 174 KTHKYISIACCTIHNYIRLNDRQDDLFNDFSNELMIVEDI 212

[Close]

BLAST of Cmc03g0060651 vs. NCBI nr
Match: XP_028063197.1 (uncharacterized protein LOC114266487 [Camellia sinensis])

HSP 1 Score: 218.8 bits (556), Expect = 3.3e-53
Identity = 94/142 (66.20%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+++GWEG+ANDSR+  E + +P N FPMP  D+YY+VDSGY+NM GFL
Sbjct: 1   MCVCSFDMRFTYVLAGWEGTANDSRVFIETVHDPTNLFPMPPTDKYYVVDSGYTNMPGFL 60

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           +P+RG+RYHL +FR +R +PR ++++F+YRHSSLRNVI+ CFGVLKA FPIL++MPPY  
Sbjct: 61  SPYRGERYHLNEFRNQRRQPRNKKQMFNYRHSSLRNVIERCFGVLKAHFPILREMPPYST 120

Query: 121 KTQRYIPITCCTIHNYIRLNDR 142
           KTQRYIPI CCTIHN+IR + +
Sbjct: 121 KTQRYIPIACCTIHNWIRTHSQ 142

[Close]

BLAST of Cmc03g0060651 vs. ExPASy TrEMBL
Match: A0A5D3C7F6 (Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00500 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.7e-75
Identity = 137/159 (86.16%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+MSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLV+SGYSNM GFL
Sbjct: 108 MCVCSFDMLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVNSGYSNMPGFL 167

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           APFRGQRYHLRDFRERRHRPRGREEVF+YRHSSLRNVI+ CFGVLKARFPILKQMPPYPI
Sbjct: 168 APFRGQRYHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPI 227

Query: 121 KTQRYIPITCCTIHNYIRLNDRK----MIFSMTLAMIND 155
           KTQ+YIPITCCT+HNYIRLNDR+      FS  L ++ D
Sbjct: 228 KTQKYIPITCCTVHNYIRLNDRQDDLFNYFSNELMIVED 266

[Close]

BLAST of Cmc03g0060651 vs. ExPASy TrEMBL
Match: A0A5A7VNL5 (Putative nuclease HARBI1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001450 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.8e-74
Identity = 133/143 (93.01%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+MSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNM GFL
Sbjct: 54  MCVCSFDMLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMPGFL 113

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           APFRGQRYHLRDFRERRHRPRGREEVF+YRHSSLRNVI+ CFGVLKARFPILKQMPPYPI
Sbjct: 114 APFRGQRYHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPI 173

Query: 121 KTQRYIPITCCTIHNYIRLNDRK 143
           KTQ+YI ITCCT+HNYIRLNDR+
Sbjct: 174 KTQKYILITCCTVHNYIRLNDRQ 196

[Close]

BLAST of Cmc03g0060651 vs. ExPASy TrEMBL
Match: A0A5D3DC11 (Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00620 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.8e-74
Identity = 133/143 (93.01%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+MSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNM GFL
Sbjct: 54  MCVCSFDMLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMPGFL 113

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           APFRGQRYHLRDFRERRHRPRGREEVF+YRHSSLRNVI+ CFGVLKARFPILKQMPPYPI
Sbjct: 114 APFRGQRYHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPI 173

Query: 121 KTQRYIPITCCTIHNYIRLNDRK 143
           KTQ+YI ITCCT+HNYIRLNDR+
Sbjct: 174 KTQKYILITCCTVHNYIRLNDRQ 196

[Close]

BLAST of Cmc03g0060651 vs. ExPASy TrEMBL
Match: A0A1S4E0U9 (uncharacterized protein LOC103496041 OS=Cucumis melo OX=3656 GN=LOC103496041 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 127/160 (79.38%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MCVCSFDM FTY+MSGWEGS ND RIL+ECI+NPENKFPMPKRDQYYLVDSGYSNM  FL
Sbjct: 54  MCVCSFDMLFTYVMSGWEGSTNDFRILEECIENPENKFPMPKRDQYYLVDSGYSNMPRFL 113

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           APF+G+RYHLRDFRERRH PRGR EVF+YRHSSLRNVI+ CFGVLKARFPILKQMPPYPI
Sbjct: 114 APFQGRRYHLRDFRERRHCPRGR-EVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPI 173

Query: 121 KTQRYIPITCCTIHNYIRLNDRK----MIFSMTLAMINDL 156
           KT +YI I CCTIHNYIRLNDR+      FS  L ++ D+
Sbjct: 174 KTHKYISIACCTIHNYIRLNDRQDDLFNDFSNELMIVEDI 212

[Close]

BLAST of Cmc03g0060651 vs. ExPASy TrEMBL
Match: A0A1R3GLP1 (Harbinger transposase-derived nuclease OS=Corchorus capsularis OX=210143 GN=CCACVL1_25156 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.4e-51
Identity = 93/138 (67.39%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           MC CSFDM FTY+M+GWEG+AND+R+  ECI N +N FPMP   +YYLVDSGY+NM GFL
Sbjct: 116 MCACSFDMRFTYVMAGWEGTANDTRVFLECISNSQNNFPMPPIGKYYLVDSGYTNMPGFL 175

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           +P+RG+RYHLRD+R R  +P G EE+F++RHS LRN I+ CFGVLKARFPILK MPPY  
Sbjct: 176 SPYRGERYHLRDYRGRGRQPTGPEEIFNHRHSFLRNCIERCFGVLKARFPILKVMPPYSS 235

Query: 121 KTQRYIPITCCTIHNYIR 138
           + QRYI I CCT+HN+IR
Sbjct: 236 RMQRYIVIACCTVHNFIR 253

[Close]

BLAST of Cmc03g0060651 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-30
Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = 0


Query: 8   MFTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFLAPFRGQRY 67
           +F Y++SGWEGSA+DSR+L + ++            ++YLVD G++N   FLAPFRG RY
Sbjct: 24  IFIYVLSGWEGSAHDSRVLSDALR------------KFYLVDCGFANRLNFLAPFRGVRY 83

Query: 68  HLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPIKTQRYIPI 127
           HL++F  +R  P    E+F+ RH SLRNVI+  FG+ K+RF I K  PP+  K Q  + +
Sbjct: 84  HLQEFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVL 141

Query: 128 TCCTIHNYIR 138
           TC  +HN++R
Sbjct: 144 TCAALHNFLR 141

[Close]

BLAST of Cmc03g0060651 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           +   SFD+ F Y+++GWEGSA+D ++L   +    NK  +P + +YY+VD+ Y N+ GF+
Sbjct: 176 LAASSFDLRFNYVLAGWEGSASDQQVLNAALTR-RNKLQVP-QGKYYIVDNKYPNLPGFI 235

Query: 61  APFRGQRYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLKARFPILKQMPPYPI 120
           AP+ G   + R+           +E+F+ RH  L   I   FG LK RFPIL   PPYP+
Sbjct: 236 APYHGVSTNSRE---------EAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPL 295

Query: 121 KTQRYIPITCCTIHNYIRL 139
           +TQ  + I  C +HNY+RL
Sbjct: 296 QTQVKLVIAACALHNYVRL 303

[Close]

BLAST of Cmc03g0060651 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17
Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           M +C   M FTYI +G  GS  D+ +LQ   +  +++FP+P  ++YYLVDSGY N  G L
Sbjct: 209 MAICDLKMLFTYIWNGAPGSCYDTAVLQ-IAQQSDSEFPLPPSEKYYLVDSGYPNKQGLL 268

Query: 61  APFRGQ-----RYHLRDFRERRHRPRGREEVFDYRHSSLRNVIKHCFGVLK 106
           AP+R       RYH+  F     RPR + E+F+  H+SLR+VI+  F + K
Sbjct: 269 APYRSSRNRVVRYHMSQF-YYGPRPRNKHELFNQCHTSLRSVIERTFRIWK 317

[Close]

BLAST of Cmc03g0060651 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 7.5e-11
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 20  ANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFLAPFRGQRYHLRDFRERRHRP 79
           ++D+++L+ C +N E+  P P   +YYLV+S Y   +G+L P R   YHL  F  R   P
Sbjct: 71  SHDTKVLKYCARN-ESFSPHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQF-GRGGPP 130

Query: 80  RGREEVFDYRHSSLRNVIKHCFGVLKARFPIL 112
              +E+F+ +H  LR+VI   FGV KA++ IL
Sbjct: 131 VTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160

[Close]

BLAST of Cmc03g0060651 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 1   MCVCSFDM-FTYIMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMSGFL 60
           + +C  DM FTY   G  GS +D+R+L   I + +  F +P   +YYLVDSGY+N  G+L
Sbjct: 143 LAICDLDMLFTYCFVGMAGSTHDARVLSAAISD-DPLFHVPPDSKYYLVDSGYANKRGYL 202

Query: 61  APFRGQRYHLRD 72
           AP+R +    +D
Sbjct: 203 APYRREHREAQD 213

The following BLAST results are available for this feature:

BLAST of Cmc03g0060651 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06269.1	2.0e-74	86.16	protein ALP1-like [Cucumis melo var. makuwa]	[more]
TYK21096.1	5.8e-74	93.01	protein ALP1-like [Cucumis melo var. makuwa]	[more]
KAA0068176.1	5.8e-74	93.01	putative nuclease HARBI1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016901856.1	2.6e-66	79.38	PREDICTED: uncharacterized protein LOC103496041 [Cucumis melo]	[more]
XP_028063197.1	3.3e-53	66.20	uncharacterized protein LOC114266487 [Camellia sinensis]	[more]

BLAST of Cmc03g0060651 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc03g0060651 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C7F6	9.7e-75	86.16	Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00...	[more]
A0A5A7VNL5	2.8e-74	93.01	Putative nuclease HARBI1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3DC11	2.8e-74	93.01	Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00...	[more]
A0A1S4E0U9	1.3e-66	79.38	uncharacterized protein LOC103496041 OS=Cucumis melo OX=3656 GN=LOC103496041 PE=...	[more]
A0A1R3GLP1	4.4e-51	67.39	Harbinger transposase-derived nuclease OS=Corchorus capsularis OX=210143 GN=CCAC...	[more]

BLAST of Cmc03g0060651 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35695.1	1.9e-30	45.38	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G41980.1	2.4e-25	40.29	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	4.1e-17	42.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G10890.1	7.5e-11	40.22	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439...	[more]
AT5G28730.1	2.2e-10	41.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 9..134 e-value: 1.4E-15 score: 57.3
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 2..140
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 2..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0060651.1	Cmc03g0060651.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046872	metal ion binding